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Gene: Ermp1 (endoplasmic reticulum metallopeptidase 1) Rattus norvegicus

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Symbol:

Ermp1

Name:

endoplasmic reticulum metallopeptidase 1

RGD ID:

727831

Description:

Predicted to enable metal ion binding activity and metalloexopeptidase activity. Involved in ovarian follicle development. Predicted to be located in endoplasmic reticulum membrane. Orthologous to human ERMP1 (endoplasmic reticulum metallopeptidase 1); INTERACTS WITH 1,3,5-trinitro-1,3,5-triazinane; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

felix-ina; Fxna; putative aminopeptidase Fxna

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ERMP1 (endoplasmic reticulum metallopeptidase 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Ermp1 (endoplasmic reticulum metallopeptidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ermp1 (endoplasmic reticulum metallopeptidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ERMP1 (endoplasmic reticulum metallopeptidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ERMP1 (endoplasmic reticulum metallopeptidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ermp1 (endoplasmic reticulum metallopeptidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ERMP1 (endoplasmic reticulum metallopeptidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ERMP1 (endoplasmic reticulum metallopeptidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ermp1 (endoplasmic reticulum metallopeptidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ermp1 (endoplasmic reticulum metallopeptidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ATP6V0E1 (ATPase H+ transporting V0 subunit e1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	ERMP1 (endoplasmic reticulum metallopeptidase 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ermp1 (endoplasmic reticulum metallopeptidase 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG10051	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	B0495.7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PFF1	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG10062	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	C44B7.11	Alliance	DIOPT (OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG10073	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG10081	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG11961	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG13160	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG30043	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG30047	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG30049	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG33012	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG9416	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ermp1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ermp1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	236,801,459 - 236,835,656 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	236,801,466 - 236,839,197 (-)	Ensembl				GRCr8
mRatBN7.2	1	227,383,992 - 227,422,120 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	227,387,920 - 227,436,909 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	235,789,751 - 235,823,887 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	242,719,424 - 242,753,558 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	235,532,581 - 235,573,223 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	247,784,830 - 247,821,771 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	247,787,582 - 247,821,728 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	255,038,053 - 255,072,617 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	233,326,954 - 233,361,107 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	224,538,820 - 224,572,973 (-)	NCBI		Celera
RGSC_v3.1	1	233,490,983 - 233,525,130 (-)	NCBI
Cytogenetic Map	1	q52	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

chronic kidney disease (ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1,3,5-trinitro-1,3,5-triazinane (EXP)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dinitrotoluene (EXP)

3,4-methylenedioxymethamphetamine (ISO)

5-aza-2'-deoxycytidine (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

beta-hexachlorocyclohexane (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Bufotalin (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

calcitriol (ISO)

carbon nanotube (ISO)

choline (ISO)

cisplatin (ISO)

clofibrate (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dextran sulfate (ISO)

dibutyl phthalate (ISO)

diethyl phthalate (ISO)

diisobutyl phthalate (ISO)

diisononyl phthalate (ISO)

diuron (ISO)

dorsomorphin (ISO)

epoxiconazole (ISO)

eugenol (EXP)

Evodiamine (ISO)

finasteride (EXP)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

gentamycin (EXP)

glyphosate (ISO)

GSK-J4 (ISO)

ivermectin (ISO)

ketamine (EXP)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

nefazodone (EXP)

Nivalenol (ISO)

p-toluidine (EXP)

paracetamol (ISO)

paraquat (ISO)

pentachlorophenol (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

resveratrol (ISO)

rimonabant (ISO)

rotenone (EXP)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (EXP)

sunitinib (ISO)

T-2 toxin (EXP)

tetrachloromethane (EXP)

titanium dioxide (ISO)

trichloroethene (EXP,ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

Triptolide (EXP)

troglitazone (ISO)

trovafloxacin (ISO)

ursodeoxycholic acid (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to oxidative stress (ISO)

endoplasmic reticulum unfolded protein response (ISO)

ovarian follicle development (IMP)

proteolysis (IBA,IEA)

Cellular Component

endoplasmic reticulum membrane (IEA)

Molecular Function

hydrolase activity (IEA)

metal ion binding (IEA)

metalloexopeptidase activity (IEA)

metallopeptidase activity (IEA)

peptidase activity (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Fxna, a novel gene differentially expressed in the rat ovary at the time of folliculogenesis, is required for normal ovarian histogenesis.	Garcia-Rudaz C, etal., Development. 2007 Mar;134(5):945-57. Epub 2007 Jan 31.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	NCBI rat LocusLink and RefSeq merged data October 15, 2003	NCBI rat LocusLink and RefSeq merged data October 15, 2003
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:19946888	PMID:25002582	PMID:31500865

Genomics

Comparative Map Data

Ermp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	236,801,459 - 236,835,656 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	236,801,466 - 236,839,197 (-)	Ensembl				GRCr8
mRatBN7.2	1	227,383,992 - 227,422,120 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	227,387,920 - 227,436,909 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	235,789,751 - 235,823,887 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	242,719,424 - 242,753,558 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	235,532,581 - 235,573,223 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	247,784,830 - 247,821,771 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	247,787,582 - 247,821,728 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	255,038,053 - 255,072,617 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	233,326,954 - 233,361,107 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	224,538,820 - 224,572,973 (-)	NCBI		Celera
RGSC_v3.1	1	233,490,983 - 233,525,130 (-)	NCBI
Cytogenetic Map	1	q52	NCBI

ERMP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	5,784,572 - 5,867,091 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	5,749,832 - 5,879,537 (-)	Ensembl			hg38	GRCh38
GRCh37	9	5,784,572 - 5,833,117 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	5,774,572 - 5,823,081 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	9	5,722,060 - 5,770,569 (-)	NCBI		Celera
Cytogenetic Map	9	p24.1	NCBI
HuRef	9	5,740,441 - 5,788,955 (-)	NCBI		HuRef
CHM1_1	9	5,785,246 - 5,833,752 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	5,789,712 - 5,872,233 (-)	NCBI		T2T-CHM13v2.0

Ermp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	29,587,276 - 29,625,815 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	29,585,614 - 29,625,815 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	19	29,609,876 - 29,648,415 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	29,608,214 - 29,648,415 (-)	Ensembl			mm10	GRCm38
MGSCv37	19	29,684,373 - 29,722,910 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	19	29,675,880 - 29,714,417 (-)	NCBI		MGSCv36	mm8
Celera	19	30,386,377 - 30,425,138 (-)	NCBI		Celera
Cytogenetic Map	19	C1	NCBI
cM Map	19	24.17	NCBI

Ermp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955434	9,778,465 - 9,824,973 (-)	Ensembl
ChiLan1.0	NW_004955434	9,772,667 - 9,825,048 (-)	NCBI	ChiLan1.0	ChiLan1.0

ERMP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	118,738,190 - 118,833,420 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	118,744,137 - 118,839,367 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	5,605,122 - 5,653,661 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	5,787,920 - 5,836,388 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	5,787,920 - 5,836,388 (-)	Ensembl			panPan2	panpan1.1

ERMP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	93,845,874 - 94,008,266 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	93,846,269 - 93,957,359 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	94,288,746 - 94,329,646 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	94,437,949 - 94,478,892 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	94,437,995 - 94,549,556 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	94,068,812 - 94,109,665 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	93,793,817 - 93,834,760 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	94,556,449 - 94,597,352 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ermp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	141,942,912 - 141,998,930 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936539	408,015 - 451,783 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936539	395,671 - 451,611 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ERMP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	216,312,615 - 216,396,296 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	216,312,827 - 216,382,063 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	242,045,563 - 242,114,516 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ERMP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	73,639,125 - 73,725,090 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666038	62,051,719 - 62,108,495 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ermp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624736	10,345,718 - 10,394,356 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624736	10,311,868 - 10,393,851 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ermp1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	29,712,315 - 29,745,258 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ermp1
198 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	265
Count of miRNA genes:	180
Interacting mature miRNAs:	207
Transcripts:	ENSRNOT00000021958
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8693637	Alc29	Alcohol consumption QTL 29	2.7	0.258	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	1	217412367	243666627	Rat
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	160111531	262090437	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	266453731	Rat
1357335	Bw39	Body weight QTL 39	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	1	207243873	252243873	Rat
1354652	Kidm20	Kidney mass QTL 20	4.3		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	186658830	266453731	Rat
2293674	Bss39	Bone structure and strength QTL 39	7.1	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	1	210980612	255980612	Rat
61455	Niddm7	Non-insulin dependent diabetes mellitus QTL 7	5.5		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	223964326	248681945	Rat
61327	Eae7	Experimental allergic encephalomyelitis QTL 7	5.6		body mass (VT:0001259)	change in body weight (CMO:0002045)	1	226175591	270518180	Rat
1600395	Niddm69	Non-insulin dependent diabetes mellitus QTL 69	4.14	0.0002	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	205233991	267096252	Rat
1578763	Kidm29	Kidney mass QTL 29	3.3	0.0001	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	1	218829748	263829748	Rat
1354624	Cm35	Cardiac mass QTL35	5.7		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	186658830	266453731	Rat
1600396	Niddm68	Non-insulin dependent diabetes mellitus QTL 68	4.97	0.0003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	205233991	267096252	Rat
1600397	Edcs4	Endometrial carcinoma susceptibility QTL 4	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	1	176288899	270518180	Rat
631838	Niddm36	Non-insulin dependent diabetes mellitus QTL 36		0.01	insulin secretion trait (VT:0003564)	calculated pancreatic islet insulin release measurement (CMO:0001217)	1	193964073	238964073	Rat
8693661	Alc34	Alcohol consumption QTL 34	2.2	0.611	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	1	217412367	238041033	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	162548015	270518180	Rat
152025235	Bw194	Body weight QTL 194	4.86		body mass (VT:0001259)		1	132966869	252856240	Rat
1600388	Niddm67	Non-insulin dependent diabetes mellitus QTL 67	5.84	0.000004	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	205233991	267096252	Rat
2293694	Bss38	Bone structure and strength QTL 38	7.05	0.0001	femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	1	210980612	255980612	Rat
1598853	Memor3	Memory QTL 3	4.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	1	152919152	268496042	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	160111531	262090437	Rat
1300145	Rf7	Renal function QTL 7	2.96		urine creatinine amount (VT:0010540)	urine creatinine level (CMO:0000125)	1	194575422	239575422	Rat
8655655	Arrd2	Age-related retinal degeneration QTL 2	7.79		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	193400541	238400541	Rat
734767	Niddm57	Non-insulin dependent diabetes mellitus QTL 57			body mass (VT:0001259)	body weight (CMO:0000012)	1	233480549	270108840	Rat
1358898	Bp255	Blood pressure QTL 255	3.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	200449456	256003563	Rat
631215	Stl8	Serum triglyceride level QTL 8	9.27	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	1	234540191	270518180	Rat
7771612	Cm80	Cardiac mass QTL 80	8.4		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	1	146080545	243492863	Rat
631843	Bw116	Body weight QTL 116	4.1	0.016	abdominal adipose amount (VT:1000220)	abdominal fat pad weight (CMO:0000088)	1	233480549	270108840	Rat
731175	Uae20	Urinary albumin excretion QTL 20	3.5	0.0018	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	207163993	269633915	Rat
2300175	Bmd40	Bone mineral density QTL 40	15.4	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	1	210980612	255980612	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
724538	Kidm1	Kidney mass QTL 1	3.2		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	223134011	262090599	Rat
2293655	Bss36	Bone structure and strength QTL 36	10.66	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	1	210980612	255980612	Rat
1298084	Thym4	Thymus enlargement QTL 4	10.68		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	1	207243873	252243873	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	160111426	262090599	Rat
2314011	Gluco56	Glucose level QTL 56			blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	209203273	254203273	Rat
8552891	Epfw5	Epididymal fat weight QTL 5	4.4		epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	1	202543537	247543537	Rat
734769	Niddm58	Non-insulin dependent diabetes mellitus QTL 58			body mass (VT:0001259)	body weight (CMO:0000012)	1	225108840	270108840	Rat
724533	Rf51	Renal function QTL 51	5.3	0.0002	kidney plasma flow trait (VT:0005524)	renal plasma flow (CMO:0001914)	1	228180370	266453608	Rat
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	154961463	266453731	Rat
1358292	Cm37	Cardiac mass QTL 37	6.2	8e-07	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	1	205674651	250674651	Rat
61376	Bp42	Blood pressure QTL 42	23.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	207243873	252243873	Rat
634313	Niddm43	Non-insulin dependent diabetes mellitus QTL 43			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	208479811	269633915	Rat
70211	Niddm24	Non-insulin dependent diabetes mellitus QTL 24	3.79		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	224633915	269633915	Rat
724552	Glom2	Glomerulus QTL 2	3.3	0.0001	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	1	232312773	270518180	Rat
1358916	Kidm22	Kidney mass QTL 22	3.32		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	212738576	257738576	Rat
2312564	Glom18	Glomerulus QTL 18	2.4	0.003	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	1	194786607	262083703	Rat
634321	Hc1	Hypercalciuria QTL 1	2.91		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	188241285	250779312	Rat
2292218	Kidm35	Kidney mass QTL 35			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	208798288	253798288	Rat
61400	Niddm1	Non-insulin dependent diabetes mellitus QTL 1	11		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	228180243	255849249	Rat
1300168	Bp170	Blood pressure QTL 170	2.76		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	192995199	237995199	Rat
61403	Niddm4	Non-insulin dependent diabetes mellitus QTL 4			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	201464383	246464383	Rat
1641926	Teswt2	Testicular weight QTL 2	2.82		testis mass (VT:1000644)	both testes wet weight (CMO:0000175)	1	203675682	248675682	Rat
631658	Cm7	Cardiac mass QTL 7	5.32	0.0001	aorta mass (VT:0002845)	aorta weight (CMO:0000076)	1	205674651	250674651	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
2293700	Bmd27	Bone mineral density QTL 27	6.6	0.0001	femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	210980612	255980612	Rat
2293701	Bmd34	Bone mineral density QTL 34	8.3	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	1	210980612	255980612	Rat
7387289	Uae45	Urinary albumin excretion QTL 45	2.86	0.0021	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	233204160	270518180	Rat
8655855	Arrd3	Age-related retinal degeneration QTL 3	3.07		lens clarity trait (VT:0001304)	cataract incidence/prevalence measurement (CMO:0001585)	1	193400541	238400541	Rat
1600374	Mcs17	Mammary carcinoma susceptibility QTL 17	3		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	207099883	252099883	Rat
6480786	Bw97	Body weight QTL 97	5.03		body mass (VT:0001259)	body weight (CMO:0000012)	1	234540191	237018045	Rat
1600363	Hc6	Hypercalciuria QTL 6	2.7		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	210980612	255980612	Rat
8693618	Alc25	Alcohol consumption QTL 25	3	0.28	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	1	217412367	238041033	Rat
738032	Hcas5	Hepatocarcinoma susceptibility QTL 5	3.12		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	185857683	270518180	Rat
2302040	Pia35	Pristane induced arthritis QTL 35	3.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	1	226175591	270518180	Rat
631669	Iddm9	Insulin dependent diabetes mellitus QTL 9	2.8	0.039	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	233349180	270518180	Rat
7394701	Uae46	Urinary albumin excretion QTL 46	3.6	0.0056	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	210980612	255980612	Rat
1598821	Rf55	Renal function QTL 55	6.3		renal blood flow trait (VT:2000006)	ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)	1	228174566	270518180	Rat

Markers in Region

RH129587

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	227,387,958 - 227,388,115 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	247,787,621 - 247,787,777	NCBI	Rnor6.0
Rnor_5.0	1	255,038,099 - 255,038,255	UniSTS	Rnor5.0
RGSC_v3.4	1	233,327,000 - 233,327,156	UniSTS	RGSC3.4
Celera	1	224,538,866 - 224,539,022	UniSTS
RH 3.4 Map	1	1616.3	UniSTS
Cytogenetic Map	1	q52	UniSTS

RH142556

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	227,412,517 - 227,412,667 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	247,812,177 - 247,812,326	NCBI	Rnor6.0
Rnor_5.0	1	255,062,655 - 255,062,804	UniSTS	Rnor5.0
RGSC_v3.4	1	233,351,556 - 233,351,705	UniSTS	RGSC3.4
Celera	1	224,563,422 - 224,563,571	UniSTS
RH 3.4 Map	1	1616.5	UniSTS
Cytogenetic Map	1	q52	UniSTS

RH141591

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	227,398,099 - 227,398,298 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	247,797,761 - 247,797,959	NCBI	Rnor6.0
Rnor_5.0	1	255,048,239 - 255,048,437	UniSTS	Rnor5.0
RGSC_v3.4	1	233,337,140 - 233,337,338	UniSTS	RGSC3.4
Celera	1	224,549,006 - 224,549,204	UniSTS
RH 3.4 Map	1	1619.9	UniSTS
Cytogenetic Map	1	q52	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
23	13	80	212	91	90	59	156	59	6	477	278	21	191	109	124	31	34	34

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_184050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY364634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000021958 ⟹ ENSRNOP00000021958

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	236,801,466 - 236,835,612 (-)	Ensembl
mRatBN7.2 Ensembl	1	227,387,920 - 227,422,069 (-)	Ensembl
Rnor_6.0 Ensembl	1	247,787,582 - 247,821,728 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114237 ⟹ ENSRNOP00000095496

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	236,801,466 - 236,839,197 (-)	Ensembl
mRatBN7.2 Ensembl	1	227,387,920 - 227,436,909 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114958 ⟹ ENSRNOP00000083037

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	236,801,466 - 236,835,612 (-)	Ensembl
mRatBN7.2 Ensembl	1	227,387,920 - 227,421,654 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000138939 ⟹ ENSRNOP00000105566

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	236,801,466 - 236,835,794 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000139089 ⟹ ENSRNOP00000109630

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	236,801,466 - 236,835,612 (-)	Ensembl

RefSeq Acc Id:

NM_184050 ⟹ NP_908939

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	236,801,459 - 236,835,612 (-)	NCBI
mRatBN7.2	1	227,387,913 - 227,422,069 (-)	NCBI
Rnor_6.0	1	247,787,575 - 247,821,728 (-)	NCBI
Rnor_5.0	1	255,038,053 - 255,072,617 (-)	NCBI
RGSC_v3.4	1	233,326,954 - 233,361,107 (-)	RGD
Celera	1	224,538,820 - 224,572,973 (-)	RGD

Sequence:

show sequence

TGGTGGCAGCTGCCGCCATGGAGTGGAGCTCGGAGTCGGCGGCCGTGCGGCGGCACCGCGGCAC
CGCGGAGCGGCGGGAGGGTCAGGCGGCCGCGTCGCACCCGCAGAGAGAGGCCTCAGCGCAGGAG
GATGCGAGGGGCGGCGGGAGGATGCGGGGGAGGACGGAGAGCGGCGGCGAGAGCCGGGGTGCGA
AGACCGCGCTGTCCGAGGCGCGCACGGCGCTGGCGCTCGCACTCTACCTGCTCGCTCTGCGGGC
GCTCGTGCAGCTGTCGCTGCAGCGGCTGGTGCTGAGCCGGACCTCGGGGCTCCAGGGCGAGTTC
GATGCGCGCCAAGCCAGGGTTTATCTGGAACACATAACGGCCATCGGCCCCAGGACTACAGGAA
GCGCAGAAAATGAAATCCTGACGGTCCAGTACCTTTTGGAGCAGATCACGCTGATAGAAGAACA
GAGCAACAGCCTCCACAGAATCTCAGTAGATGTACAGCGGCCTACCGGCTCCTTTAGCATTGAC
TTCTTGGGGGGCTTTACGAGCTACTACGACAACATTACTAATGTCGTGGTGAAGCTGGAGCCCC
AAGATGGAGCCAAGTACGCTGTCCTGGCTAACTGTCACTTTGACTCAGTGGCAAATTCACCAGG
TGCCAGTGACGATGCCGTTAGCTGTGCAGTGATGCTCGAAGTCCTCCGGGTCATGGCAGCCTCT
CCAGAACCCCTGCAGCATGCTGTGGTGTTCCTCTTTAATGGTGCAGAGGAAAATGTCTTGCAAG
CAAGCCATGGTTTTATTACTCAACATCCCTGGGCCAGTTTGATTCGAGCATTTATTAACCTGGA
GGCTGCAGGTGTCGGAGGGAAAGAACTTGTGTTCCAAACAGGCCCTGAAAATCCTTGGCTGGTT
CAGGCCTATGTCTCAGCAGCTAAACACCCCTTTGCTTCTGTGGTGGCCCAGGAGGTTTTTCAGA
GTGGGATCATTCCTTCTGACACCGACTTCCGAATCTACAGGGATTTTGGGAACATTCCAGGAAT
AGACTTAGCCTTTATTGAAAATGGGTACATCTATCACACCAAGTATGACACAGCGGACAGAATT
CTCATAGATTCCATTCAGAGAGCAGGTGACAACATTTTAGCAGTTCTTAAATACCTAGCTACAT
CTGACATGCTGGCTTCTTCCTCTGAGTACCGACATGGAAGCATGGTCTTCTTCGATGTGCTTGG
CCTGCTGGTCATTGCGTACCCTTCTCGTGTTGGCTCCATAATAAACTACATGGTGGTAATGGCT
GTTGTTCTGTACCTGGGAAGAAAACTGCTGCGGCCCAATCACAGTAATTCTAATTATGTGAGAG
ACTTCTTGTGCGGACTTGGCATCACTTTCATTAGCTGGTTCACCAGCCTTGTTACAGTTCTCAT
TATAGCAGTGTTCGTCTCCCTCATTGGACAGTCGCTCTCATGGTATAACTACTTTTATATCGCC
GTTTGCCTGTATGGAACTGCAACAGTCGCCAAAATAATACTCATTCATACTCTTGCAAAAAGAT
TTTACTATGTGAACGCCAGCGACCTGTATCTGGGAGAACTGTTCTTTGACACCTCACTGTTTGT
GCACTGTGGTTTTCTTGTTGCTTTAACTGCTCAGGGCTTCTGCTCTGCATTCATGAGTGCTGTC
TGGGTAGCTTTTCCATTGCTCACAAAGCTTTGTGTGTACAAGGACTTCAAGAAGCACGGTGCCA
AAGGAAGATTTATTGCTCTTTACTTATTGGGGATGTTCATCCCGTATCTTTATGGACTATACCT
CATCTGGGCTGTATTTGAGATGTTTACTCCTATCCTTGGAAGAAGCGGTTCGGAAATCCCTCCT
GATGTTGTGCTAGCATCCATTTTGGCTGTCTGTGTGATGATTCTCTCCTCCTATTTTATTACCT
TCATCTACCTTGTGAACAGCACAAAGAAAACCATTCTGACTCTAATACTGGTGTGTGCAGTCAC
ATTCCTCCTTGTGTGCAGTGGGGCCTTTTTCCCATACAGCTCCAATCCTGACAGTCCAAAGCCG
AAGAGAGTGTTTCTTCAGCACGTGAGTAGAACTTTTCATAACTTAGAAGGAAGCGTAGTAAAAA
GAGACTCTGGAATATGGATCAATGGTTTTGATTATACTGGAATGTCTCATGTAACACCGCACAT
TCCGGAGATCAATGATACAATCCGAGCTCACTGTGAGGAGAACGCCCCGCTCTGTGGCTTCCCT
TGGTATCTCCCAGTGCACTTTCTCATCAGGAAAAACTGGTATCTTCCAGCTCCAGAAATTTCCC
CAAGAAATCCTGCTCATTTCAGACTTGTATCCAAAGAGAAGATGCCTTGGGATTCAATAAAGTT
GACCTTTGAAGCAACAGGACCAAGCCATATGTCTTTCTATGTTCGAACCCACAAAGGATCAACG
CTTTCTCAGTGGTCTCTTGGCAACGGCATTCCAGTCACAAGTCGAGGAGGGGACTACTTTGTGT
TTTACTCCCATGGACTCCAGGCTTCTGCGTGGCAGTTCTGGATAGAAGTGCAGGTCTCAGAGGA
ACAGCCAGAAGGAATGGTCACTGTGGCCATTGCTGCCCACTATCTATCAGGGGAAAACAAGAGA
TCATCTCAGCTGGATGCTCTGAAGGAGAAGTTCCCAGATTGGTCATTTCCCTCGGCGTGGGTTT
CCACCTATAGTCTCTTTGTGTTTTAATCGTGTGAATGGGCGTTGAGTACATGCCCCCTGGACAT
TCCATGGGGTAGTTCCTCTCGCACGATACATAGATGTTGTAATACATGTCAATGAATTTTACTG
AGCATATGTTCAAAGAGCTTTTGGGATAACACTCTTCAGGGCCAAGTACTGTATGGGTTAAACT
TAGGAACAGTGATGCCTGGCCATTATGTCAGTTGAAAATTCCTGTTTTCTGACACTTAAGCACA
TGTGGATACTGCCAATCATGTAATTTGTATGATGTAAGCAGCATACCACTTGAGTAGCTTTCCT
GTGAGGATGAAGAAAGATGTAGGCTCTGAGACCACTGTTAATGAAGTAGGCAAGTCCACCTGAC
AGTGGATCGTGGGTAAGATGCCATTCACTGGAGTAGTGCCTCTCTCTGCACTACAACTGCAAGT
CACTGGAAAGTAAATGCCGCCGAGGTGGAAGGAAGCCTTCGGCACCTTAGATGCTCGAGCGCTG
TTTCTTCAGTGTTGTTCAGTGTTTGTCTGCTCTGAAGCCTAAAGCCTGACTCCTGAGTAGCATT
CAGTGTCTGTTTTCCTCCCAAACATGTTCCTGTCATTTATCTGGGGAAGAGAACATTTCTTCAG
CTACATCTCTTCTCACATGTCATGGGTTGTTTCATTTGTGCAAGCACAGAACTAAACTTCTTCC
CAGCACACGGAGTTGCCTGCATAGCTGCTGAGGAGGAAGAGGAGGAGCGCTGGGAGGACTGTGC
ATTTTGTAATATTTATTCTTTGTTTTACAGGGAGTCTGTCATACAAGGTTAATCCTTTAGAACA
AAACTTTTATTGCTGCACTGGGTTTTCTGTTTCCTAGCAGGTGATCACGGCCTTGTAGCTCTCT
GTAGTGAGACCTGGATGTCCTGATGTTGAGGTTGTAGCTTGTACAGGTGTGCGACAACTCTACC
TGCAGTTGCTATTTCCAGGTCCTGCAGAAGGGCAGCAGGAGACCTCATGGTGCTTTTCATTTTG
AAAACAGGGATGTAGCTTGTCAGGTCTGTCATGGCAGTGGCTCTTGTGACTTTTCTAGTTCCAT
TGGTGACAGAGGATGAGGCAAACAATAAATTATGCTAATTTCTTTTACAGTAGTAAATGTAAAA
AGAAAATTTGAGTTAGTCAACAAGCATGACCCAAAATATAGTTGAAAGAAAGGCCATAGAAAGG
CAAAAACAAAACAAACAATATCCTTGTCAGGTGAGAACAGGAAGGCATCTCTCAGAGTGGCCCT
CAGAATTGTCAGCAAGAGCATAGTAAGTGTGCACTGCAGAAGAGCTGAAAATTGCTTGTGTGGT
ATGTGTCAGTTTCTTAATCATGTTCCTTGTATTGCCTGCCTAATCTCTAACGCCTTAAAAACCT
GGGCCCATGGACATGTAGGGCTGCAGCTGGAGCTGAATGGTAGCGTGCTGACTGTCACGTGTGG
TGATACTGTAAAGTGAAGTCATTTTTTTGCTGGACTCACAGAAATCTTATCTCAACAGTGCTTC
AAGTATCCAGCTCCCGCTGTGTAAGTCTTGTCCGTCAGGCAGTACTGAAGGCTTGACGGTCCAG
CTTTATGTCCAGCTTGTGAAGAACCACAGCTGAGGGAAATAAGTAACAGTACTAATAGCTCAAT
GAATTTCAAAAGACAGGCGTATGTTCTGTGCCTGGGTTCATCTGAAATTGATTACTAGACATTA
TGGGGGAGGGGTGCAACATGTCATGCTGAAGCAGGACAAAAAAGCCAAGATGTCCTCTGACTTC
TGTCCTTTGAGCCTTTATACTGCCTTTTCAGTATAATCAATCATGGTTTTCTGTCTGTCTTTGG
GTTGTTTCTCTATGCAAATGATTTTGATTTTCTCTTAAGATTATTATGCAGCCACTAACAAAAG
GTTCAGTTTCAGGGCATGCTTTAAGGCCAGAAATGGTCAAGTAATTACATACAGTATTCATGGC
TTTTAAAAAGCACACTGTCGTTATCAGTAGCTCCTTTCCCTTTTGAAGATTACCTGACCACTTG
TGTCGTTCTCTTCTCAAAAGACAGTTCCAGGTCTAAGTAATGCATCCCCCAATGAGTATAAACT
CAAGCAGCACATTAGGAAGAAGCATAAAGAACTGACTTTACAGTTCTTAATTTTTTAAGGAAGA
CTGTTCTATACAGCATTTCCAGTTTAGCAGCTATAACTAAATGTCTAAGATCCCCCACCCTGTC
TTGCTGTGAAGGAGGTTAGACCACAAGCCAGCCTAGGTGACTCAGGAAGCTGTTGGAAGAACAT
GTCTGTCCATCTCTTTTCCACTTCTTTATTGACTTGTTGAAGGTTAATTGTTGCCTTACAATGT
TACTGAAATAAACTTTTTAACATACTGGTTGGAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006231241 ⟹ XP_006231303

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	236,801,459 - 236,835,656 (-)	NCBI
mRatBN7.2	1	227,383,992 - 227,422,120 (-)	NCBI
Rnor_6.0	1	247,784,830 - 247,821,771 (-)	NCBI
Rnor_5.0	1	255,038,053 - 255,072,617 (-)	NCBI

Sequence:

show sequence

GGAGGCCGCGGTGGCCCGGACTGTCGCGGGCTGGGGCGGTTGGTGGTGGCAGCTGCCGCCATGG
AGTGGAGCTCGGAGTCGGCGGCCGTGCGGCGGCACCGCGGCACCGCGGAGCGGCGGGAGGGTCA
GGCGGCCGCGTCGCACCCGCAGAGAGAGGCCTCAGCGCAGGAGGATGCGAGGGGCGGCGGGAGG
ATGCGGGGGAGGACGGAGAGCGGCGGCGAGAGCCGGGGTGCGAAGACCGCGCTGTCCGAGGCGC
GCACGGCGCTGGCGCTCGCACTCTACCTGCTCGCTCTGCGGGCGCTCGTGCAGCTGTCGCTGCA
GCGGCTGGTGCTGAGCCGGACCTCGGGGCTCCAGGGCGAGTTCGATGCGCGCCAAGCCAGGGTT
TATCTGGAACACATAACGGCCATCGGCCCCAGGACTACAGGAAGCGCAGAAAATGAAATCCTGA
CGGTCCAGTACCTTTTGGAGCAGATCACGCTGATAGAAGAACAGAGCAACAGCCTCCACAGAAT
CTCAGTAGATGTACAGCGGCCTACCGGCTCCTTTAGCATTGACTTCTTGGGGGGCTTTACGAGC
TACTACGACAACATTACTAATGTCGTGGTGAAGCTGGAGCCCCAAGATGGAGCCAAGTACGCTG
TCCTGGCTAACTGTCACTTTGACTCAGTGGCAAATTCACCAGGTGCCAGTGACGATGCCGTTAG
CTGTGCAGTGATGCTCGAAGTCCTCCGGGTCATGGCAGCCTCTCCAGAACCCCTGCAGCATGCT
GTGGTGTTCCTCTTTAATGGTGCAGAGGAAAATGTCTTGCAAGCAAGCCATGGTTTTATTACTC
AACATCCCTGGGCCAGTTTGATTCGAGCATTTATTAACCTGGAGGCTGCAGGTGTCGGAGGGAA
AGAACTTGTGTTCCAAACAGGCCCTGAAAATCCTTGGCTGGTTCAGGCCTATGTCTCAGCAGCT
AAACACCCCTTTGCTTCTGTGGTGGCCCAGGAGGTTTTTCAGAGTGGGATCATTCCTTCTGACA
CCGACTTCCGAATCTACAGGGATTTTGGGAACATTCCAGGAATAGACTTAGCCTTTATTGAAAA
TGGGTACATCTATCACACCAAGTATGACACAGCGGACAGAATTCTCATAGATTCCATTCAGAGA
GCAGGTGACAACATTTTAGCAGTTCTTAAATACCTAGCTACATCTGACATGCTGGCTTCTTCCT
CTGAGTACCGACATGGAAGCATGGTCTTCTTCGATGTGCTTGGCCTGCTGGTCATTGCGTACCC
TTCTCGTGTTGGCTCCATAATAAACTACATGGTGGTAATGGCTGTTGTTCTGTACCTGGGAAGA
AAACTGCTGCGGCCCAAACACAGGAATTCTAATTATGTGAGAGACTTCTTGTGCGGACTTGGCA
TCACTTTCATTAGCTGGTTCACCAGCCTTGTTACAGTTCTCATTATAGCAGTGTTCGTCTCCCT
CATTGGACAGTCGCTCTCATGGTATAACTACTTTTATATCGCCGTTTGCCTGTATGGAACTGCA
ACAGTCGCCAAAATAATACTCATTCATACTCTTGCAAAAAGATTTTACTATGTGAACGCCAGCG
ACCTGTATCTGGGAGAACTGTTCTTTGACACCTCACTGTTTGTGCACTGTGGTTTTCTTGTTGC
TTTAACTGCTCAGGGCTTCTGCTCTGCATTCATGAGTGCTGTCTGGGTAGCTTTTCCATTGCTC
ACAAAGCTTTGTGTGTACAAGGACTTCAAGAAGCACGGTGCCAAAGGAAGATTTATTGCTCTTT
ACTTATTGGGGATGTTCATCCCGTATCTTTATGGACTATACCTCATCTGGGCTGTATTTGAGAT
GTTTACTCCTATCCTTGGAAGAAGCGGTTCGGAAATCCCTCCTGATGTTGTGCTAGCATCCATT
TTGGCTGTCTGTGTGATGATTCTCTCCTCCTATTTTATTACCTTCATCTACCTTGTGAACAGCA
CAAAGAAAACCATTCTGACTCTAATACTGGTGTGTGCAGTCACATTCCTCCTTGTGTGCAGTGG
GGCCTTTTTCCCATACAGCTCCAATCCTGACAGTCCAAAGCCGAAGAGAGTGTTTCTTCAGCAC
GTGAGTAGAACTTTTCATAACTTAGAAGGAAGCGTAGTAAAAAGAGACTCTGGAATATGGATCA
ATGGTTTTGATTATACTGGAATGTCTCATGTAACACCGCACATTCCGGAGATCAATGATACAAT
CCGAGCTCACTGTGAGGAGAACGCCCCGCTCTGTGGCTTCCCTTGGTATCTCCCAGTGCACTTT
CTCATCAGGAAAAACTGGTATCTTCCAGCTCCAGAAATTTCCCCAAGAAATCCTGCTCATTTCA
GACTTGTATCCAAAGAGAAGATGCCTTGGGATTCAATAAAGTTGACCTTTGAAGCAACAGGACC
AAGCCATATGTCTTTCTATGTTCGAACCCACAAAGGATCAACGCTTTCTCAGTGGTCTCTTGGC
AACGGCATTCCAGTCACAAGTCGAGGAGGGGACTACTTTGTGTTTTACTCCCATGGACTCCAGG
CTTCTGCGTGGCAGTTCTGGATAGAAGTGCAGCAGGTCTCAGAGGAACAGCCAGAAGGAATGGT
CACTGTGGCCATTGCTGCCCACTATCTATCAGGGGAAAACAAGAGATCATCTCAGCTGGATGCT
CTGAAGGAGAAGTTCCCAGATTGGTCATTTCCCTCGGCGTGGGTTTCCACCTATAGTCTCTTTG
TGTTTTAATCGTGTGAATGGGCGTTGAGTACATGCCCCCTGGACATTCCATGGGGTAGTTCCTC
TCGCACGATACATAGATGTTGTAATACATGTCAATGAATTTTACTGAGCATATGTTCAAAGAGC
TTTTGGGATAACACTCTTCAGGGCCAAGTACTGTATGGGTTAAACTTAGGAACAGTGATGCCTG
GCCATTATGTCAGTTGAAAATTCCTGTTTTCTGACACTTAAGCACATGTGGATACTGCCAATCA
TGTAATTTGTATGATGTAAGCAGCATACCACTTGAGTAGCTTTCCTGTGAGGATGAAGAAAGAT
GTAGGCTCTGAGACCACTGTTAATGAAGTAGGCAAGTCCACCTGACAGTGGATCGTGGGTAAGA
TGCCATTCACTGGAGTAGTGCCTCTCTCTGCACTACAACTGCAAGTCACTGGAAAGTAAATGCC
GCCGAGGTGGAAGGAAGCCTTCGGCACCTTAGATGCTCGAGCGCTGTTTCTTCAGTGTTGTTCA
GTGTTTGTCTGCTCTGAAGCCTAAAGCCTGACTCCTGAGTAGCATTCAGTGTCTGTTTTCCTCC
CAAACATGTTCCTGTCATTTATCTGGGGAAGAGAACATTTCTTCAGCTACATCTCTTCTCACAT
GTCATGGGTTGTTTCATTTGTGCAAGCACAGAACTAAACTTCTTCCCAGCACACGGAGTTGCCT
GCATAGCTGCTGAGGAGGAAGAGGAGGAGCGCTGGGAGGACTGTGCATTTTGTAATATTTATTC
TTTGTTTTACAGGGAGTCTGTCATACAAGGTTAATCCTTTAGAACAAAACTTTTATTGCTGCAC
TGGGTTTTCTGTTTCCTAGCAGGTGATCACGGCCTTGTAGCTCTCTGTAGTGAGACCTGGATGT
CCTGATGTTGAGGTTGTAGCTTGTACAGGTGTGCGACAACTCTACCTGCAGTTGCTATTTCCAG
GTCCTGCAGAAGGGCAGCAGGAGACCTCATGGTGCTTTTCATTTTGAAAACAGGGATGTAGCTT
GTCAGGTCTGTCATGGCAGTGGCTCTTGTGACTTTTCTAGTTCCATTGGTGACAGAGGATGAGG
CAAACAATAAATTATGCTAATTTCTTTTACAGTAGTAAATGTAAAAAGAAAATTTGAGTTAGTC
AACAAGCATGACCCAAAATATAGTTGAAAGAAAGGCCATAGAAAGGCAAAAACAAAACAAACAA
TATCCTTGTCAGGTGAGAACAGGAAGGCATCTCTCAGAGTGGCCCTCAGAATTGTCAGCAAGAG
CATAGTAAGTGTGCACTGCAGAAGAGCTGAAAATTGCTTGTGTGGTATGTGTCAGTTTCTTAAT
CATGTTCCTTGTATTGCCTGCCTAATCTCTAACGCCTTAAAAACCTGGGCCCATGGACATGTAG
GGCTGCAGCTGGAGCTGAATGGTAGCGTGCTGACTGTCACGTGTGGTGATACTGTAAAGTGAAG
TCATTTTTTTGCTGGACTCACAGAAATCTTATCTCAACAGTGCTTCAAGTATCCAGCTCCCGCT
GTGTAAGTCTTGTCCGTCAGGCAGTACTGAAGGCTTGACGGTCCAGCTTTATGTCCAGCTTGTG
AAGAACCACAGCTGAGGGAAATAAGTAACAGTACTAATAGCTCAATGAATTTCAAAAGACAGGC
GTATGTTCTGTGCCTGGGTTCATCTGAAATTGATTACTAGACATTATGGGGGAGGGGTGCAACA
TGTCATGCTGAAGCAGGACAAAAAAGCCAAGATGTCCTCTGACTTCTGTCCTTTGAGCCTTTAT
ACTGCCTTTTCAGTATAATCAATCATGGTTTTCTGTCTGTCTTTGGGTTGTTTCTCTATGCAAA
TGATTTTGATTTTCTCTTAAGATTATTATGCAGCCACTAACAAAAGGTTCAGTTTCAGGGCATG
CTTTAAGGCCAGAAATGGTCAAGTAATTACATACAGTATTCATGGCTTTTAAAAAGCACACTGT
CGTTATCAGTAGCTCCTTTCCCTTTTGAAGATTACCTGACCACTTGTGTCGTTCTCTTCTCAAA
AGACAGTTCCAGGTCTAAGTAATGCATCCCCCAATGAGTATAAACTCAAGCAGCACATTAGGAA
GAAGCATAAAGAACTGACTTTACAGTTCTTAATTTTTTAAGGAAGACTGTTCTATACAGCATTT
CCAGTTTAGCAGCTATAACTAAATGTCTAAGATCCCCCACCCTGTCTTGCTGTGAAGGAGGTTA
GACCACAAGCCAGCCTAGGTGACTCAGGAAGCTGTTGGAAGAACATGTCTGTCCATCTCTTTTC
CACTTCTTTATTGACTTGTTGAAGGTTAATTGTTGCCTTACAATGTTACTGAAATAAACTTTTT
AACATACTGGTTGGAAAAAAATGGATCTTTTACAACTGCTTTTTATTGTATCCTAATATTTCCA
GGCTATTTTATATCTCTAGTCTGTCTATATAGATCTCTATCTATCTATCTATCTATCTATCTAT
CTATCTATCTATCTATCTATCTATCCTCTTTAAAATGACCTATATGGCTTTCATATGACTGCTA
TTTTAATAAGTGGCAGAAGCAAAGAATTCAAGATAGAAATGCTCACTTCACTTGGAATCTTTTT
ACCTGGAGTGAAATTTTACACCTGAATTTCAGAGAAATAAAAAGAACCTGTTTAGCAAATGGTA
AAATCCTGAGGGGTTGGGGATTTAGCTCAGTGGTAGAGCACTTGCCTAGCAATCACGAGGCCCT
CGGTTCAGTCCCCAGCTCCGAAAAAAAAGAAAAGGAAAAAAAAAATCCTGAGTATATTTAGGTT
TAAATTTTCTTCACTGGGAGAGGAAATCACAAAAGGAAACCTTTTTAAAACTGTGGCTAGGGGG
GCTTGGGGATTTAGCTCAGTGGTAGAACGCTTGCCTAGGAAGCGCAAGGCCCTGGGTTCGGTCC
CCAGCTCCGAAAAAAAGAACCAAAACAAACAAACAAACAAAAAACAAAACAAACAAACAAAAAA
AAACTGTGGCTAGGGATGAGAGCGAGCAAAGAAGCTACATTGCAGCCTGTGGTCACAGGGAAGG
CTGACACCAGGGCCAAGCCCACAGCATTTCTCTAAGCGCTTAGTTTCTGAGGAGATTCTGTCCC
AGCAGTTCAAGGTGAAACATCAATTTTTGTTCTTTTCATTTTAGGGCCAATAAAGTCATAATGC
ACATATGCCTCAGTATATTGAACTTAAAAATTATGATTGCAAAATTTATTGAGAATTTATTTAA
TCCAGTATCCTGACCAAATGGGATCAGTGAAATGGACCAAACAATGAACAATCTTATGACCATC
TCAGAAGGATGGTCTGTTTTTCTCTTTTCTGAGAAAGAGGCTGTTTTTATCTCCAAATGATCTG
TTTGGATATCAGCAAGAAATTTAACTGTATATATTGACTTTCAAGTAGTTATGCTGAGCCAAAA
CAATACAGCAAAACAAAACTTTAAAAAAGTATACAAGAACCAAAGACTAATTTCATAACCTTGC
TGAGTTTCTTGCTTTGCGGCTTCCTAGTTCTACGAGTTACACATTATGTATTTTATCAGTCAAA
CCCAGCCCGATTCTACCCAGGAAGGGTCACCAGTGAAAACCCAGAGCATCATACTTACTGACAA
GAGACTTCCTTCAGACAGGAGGAAGGCAAAATATCAACTGCCACTCCTCTTGATATCACTCTGG
TGGCTCCAGCCAGGACAACTTGGCATGCAAAGACAAAACATCCAGATCTGAAAGTGCAGCTAAA
ATTCTACCTGGTTGCAGATGACATCATCATCCACATGGAAAATCACAGAATGCAAAGATGAAAT
TAAGCATTCCACTTAGAAGAATACCACGAAGAATGACAGAGTAAAGGCAAGGAAGTTCAAGACA
TTGCTGAATGGAATCAGAGGGCTAAAATGAAGGAGACATCTGTGGTCTGGGAAGCATGATATGA
AGAAGGGCTGCCTTCTCCTAACAGACTTGTTTACACATTGCACACCATCTCTACAGAGCCCATC
TGGAGTGTATGCACACTGAAAAGTTGATCTGAAATCCACAGGGAGCCACAGGAGTCCTACAACA
GTCACAGCAGCCTTGGGGTAAAGGGAGTACTTGTACCTCCAAAGCTTCCTAGGGAGCAAGAATC
CCCAGGAAAGAGACCTCACATTTATAGTGTGTCTATTAAAAACAAAAAACGCATTGTAGTGTTT
TTGACAGTTCAGTTGGGAAAAAAAATCTTCATAAATTGTACTCAGAACATTCCATATGTAATAG
AGTTAGTCCTTCAAATATACAAAAATTAACTCAAAAATGTGTCTAAATGTTTAAGTTACAACTC
TCAAGCAGAGGCATAAATATTACAGCCTTGGGTTAAATAGTTGTTTCCTAACTGTGGCACAAAC
GCACAAGCAACAAGGAGAATAAACTGAACTCCCATCACCATGAGAAGTACTGCAGCCAGCACAG
ACGCACGCCTTTAACCCCAGCACTCGGGAGGCAGAGGCAGGTGGATCTTTGTGAGTTTGAGGCC
AGCCTGGTCTACAGAGCTAGTGCCAGGACACCCAGGTTATTACGAAGAGAAACCCTGTCTTGAA
AAACAAAACACAACAAACAACAAACAGAAAAGAAAAGCCGTCTATCAAAATTCCAAAAGATAGT
ATCGTGGAAGGGAAATCATAATGCTAATCATAAACTTGGGTAAAGCTTAGCATCCAAAAAATGT
ATAAAATCACTGGCCAACCAAATATAAAAAGATCTTTTAGTTTGGTCTAAAAACCAAAAAAAGA
TACACATAAGCCACCTACATTAAGTGCAGGTATCAGAAGCTGGCCTTCATTTACAGCTAGTGGA
AACTTTAATGAAGGCCCTCTAGCATGTAGAACTTGTTAGTTCCTCCAGGGCATAGTCCAGCCAC
TGGACTTCTAGAGAGAACTGAAAACATCCACACAGAAAAGTCTCATCCTTGAATCCCCTCCCTT
ATCCACAAGGACATGGTTTTCCTTGGATTGTGTGGTACATACACCTTTTAACCTATATATACAC
CTGAGCTAAGAGTTAGGAATCAAGCACAGTAAGAAACATGTGTAACAGTGTGCTGTAATAAATG
CTGTTTAAAACTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_908939	(Get FASTA)	NCBI Sequence Viewer
	XP_006231303	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAQ55282	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000105566
GenBank Protein	Q6UPR8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_908939 ⟸ NM_184050

- UniProtKB:

Q6UPR8 (UniProtKB/Swiss-Prot), F1M6W2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEWSSESAAVRRHRGTAERREGQAAASHPQREASAQEDARGGGRMRGRTESGGESRGAKTALSE
ARTALALALYLLALRALVQLSLQRLVLSRTSGLQGEFDARQARVYLEHITAIGPRTTGSAENEI
LTVQYLLEQITLIEEQSNSLHRISVDVQRPTGSFSIDFLGGFTSYYDNITNVVVKLEPQDGAKY
AVLANCHFDSVANSPGASDDAVSCAVMLEVLRVMAASPEPLQHAVVFLFNGAEENVLQASHGFI
TQHPWASLIRAFINLEAAGVGGKELVFQTGPENPWLVQAYVSAAKHPFASVVAQEVFQSGIIPS
DTDFRIYRDFGNIPGIDLAFIENGYIYHTKYDTADRILIDSIQRAGDNILAVLKYLATSDMLAS
SSEYRHGSMVFFDVLGLLVIAYPSRVGSIINYMVVMAVVLYLGRKLLRPNHSNSNYVRDFLCGL
GITFISWFTSLVTVLIIAVFVSLIGQSLSWYNYFYIAVCLYGTATVAKIILIHTLAKRFYYVNA
SDLYLGELFFDTSLFVHCGFLVALTAQGFCSAFMSAVWVAFPLLTKLCVYKDFKKHGAKGRFIA
LYLLGMFIPYLYGLYLIWAVFEMFTPILGRSGSEIPPDVVLASILAVCVMILSSYFITFIYLVN
STKKTILTLILVCAVTFLLVCSGAFFPYSSNPDSPKPKRVFLQHVSRTFHNLEGSVVKRDSGIW
INGFDYTGMSHVTPHIPEINDTIRAHCEENAPLCGFPWYLPVHFLIRKNWYLPAPEISPRNPAH
FRLVSKEKMPWDSIKLTFEATGPSHMSFYVRTHKGSTLSQWSLGNGIPVTSRGGDYFVFYSHGL
QASAWQFWIEVQVSEEQPEGMVTVAIAAHYLSGENKRSSQLDALKEKFPDWSFPSAWVSTYSLF
VF

hide sequence

RefSeq Acc Id:	XP_006231303 ⟸ XM_006231241
- Peptide Label:	isoform X1
- UniProtKB:	F1M6W2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEWSSESAAVRRHRGTAERREGQAAASHPQREASAQEDARGGGRMRGRTESGGESRGAKTALSE ARTALALALYLLALRALVQLSLQRLVLSRTSGLQGEFDARQARVYLEHITAIGPRTTGSAENEI LTVQYLLEQITLIEEQSNSLHRISVDVQRPTGSFSIDFLGGFTSYYDNITNVVVKLEPQDGAKY AVLANCHFDSVANSPGASDDAVSCAVMLEVLRVMAASPEPLQHAVVFLFNGAEENVLQASHGFI TQHPWASLIRAFINLEAAGVGGKELVFQTGPENPWLVQAYVSAAKHPFASVVAQEVFQSGIIPS DTDFRIYRDFGNIPGIDLAFIENGYIYHTKYDTADRILIDSIQRAGDNILAVLKYLATSDMLAS SSEYRHGSMVFFDVLGLLVIAYPSRVGSIINYMVVMAVVLYLGRKLLRPKHRNSNYVRDFLCGL GITFISWFTSLVTVLIIAVFVSLIGQSLSWYNYFYIAVCLYGTATVAKIILIHTLAKRFYYVNA SDLYLGELFFDTSLFVHCGFLVALTAQGFCSAFMSAVWVAFPLLTKLCVYKDFKKHGAKGRFIA LYLLGMFIPYLYGLYLIWAVFEMFTPILGRSGSEIPPDVVLASILAVCVMILSSYFITFIYLVN STKKTILTLILVCAVTFLLVCSGAFFPYSSNPDSPKPKRVFLQHVSRTFHNLEGSVVKRDSGIW INGFDYTGMSHVTPHIPEINDTIRAHCEENAPLCGFPWYLPVHFLIRKNWYLPAPEISPRNPAH FRLVSKEKMPWDSIKLTFEATGPSHMSFYVRTHKGSTLSQWSLGNGIPVTSRGGDYFVFYSHGL QASAWQFWIEVQQVSEEQPEGMVTVAIAAHYLSGENKRSSQLDALKEKFPDWSFPSAWVSTYSL FVF hide sequence

Ensembl Acc Id:

ENSRNOP00000021958 ⟸ ENSRNOT00000021958

Ensembl Acc Id:

ENSRNOP00000095496 ⟸ ENSRNOT00000114237

Ensembl Acc Id:

ENSRNOP00000083037 ⟸ ENSRNOT00000114958

Ensembl Acc Id:

ENSRNOP00000109630 ⟸ ENSRNOT00000139089

Ensembl Acc Id:

ENSRNOP00000105566 ⟸ ENSRNOT00000138939

Protein Domains

Endoplasmic reticulum metallopeptidase 1-like C- Endoplasmic reticulum metallopeptidase 1/1-A TM Peptidase M28

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6UPR8-F1-model_v2	AlphaFold	Q6UPR8	1-898	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13690847

Promoter ID:

EPDNEW_R1372

Type:

multiple initiation site

Name:

Ermp1_1

Description:

endoplasmic reticulum metallopeptidase 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	247,821,749 - 247,821,809	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:727831	AgrOrtholog
BioCyc Gene	G2FUF-55964	BioCyc
Ensembl Genes	ENSRNOG00000010915	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000138939	ENTREZGENE
Gene3D-CATH	Zn peptidases	UniProtKB/Swiss-Prot
InterPro	ERMP1-like_C	UniProtKB/Swiss-Prot
	ERMP1_1-A_TM	UniProtKB/Swiss-Prot
	Fxna-like_M28_dom	UniProtKB/Swiss-Prot
	M28_fam	UniProtKB/Swiss-Prot
	Peptidase_M28	UniProtKB/Swiss-Prot
KEGG Report	rno:373544	UniProtKB/Swiss-Prot
NCBI Gene	373544	ENTREZGENE
PANTHER	ENDOPLASMIC RETICULUM METALLOPEPTIDASE 1	UniProtKB/Swiss-Prot
	PTHR12147	UniProtKB/Swiss-Prot
Pfam	ERMP1-TM	UniProtKB/Swiss-Prot
	ERMP1_C	UniProtKB/Swiss-Prot
	Peptidase_M28	UniProtKB/Swiss-Prot
PhenoGen	Ermp1	PhenoGen
RatGTEx	ENSRNOG00000010915	RatGTEx
Superfamily-SCOP	Zn-dependent exopeptidases	UniProtKB/Swiss-Prot
UniProt	A0A8I5ZWD3_RAT	UniProtKB/TrEMBL
	A0A8I6APA9_RAT	UniProtKB/TrEMBL
	A0ABK0LFS1_RAT	UniProtKB/TrEMBL
	A0ABK0LVC1_RAT	UniProtKB/TrEMBL
	ERMP1_RAT	UniProtKB/Swiss-Prot
	F1M6W2	ENTREZGENE, UniProtKB/TrEMBL
	Q6UPR8	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2007-09-24	Ermp1	endoplasmic reticulum metallopeptidase 1	Fxna	putative aminopeptidase Fxna	Symbol and Name updated	1299863	APPROVED
2005-07-08	Fxna	putative aminopeptidase Fxna			Symbol and Name status set to approved	1299863	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI