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Gene: Dgkz (diacylglycerol kinase zeta) Rattus norvegicus

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Symbol:

Dgkz

Name:

diacylglycerol kinase zeta

RGD ID:

70929

Description:

Enables ATP-dependent diacylglycerol kinase activity. Predicted to be involved in several processes, including glycerolipid metabolic process; lipid phosphorylation; and maintenance of postsynaptic density structure. Predicted to act upstream of or within negative regulation of Ras protein signal transduction. Is active in glutamatergic synapse and postsynaptic density. Orthologous to human DGKZ (diacylglycerol kinase zeta); PARTICIPATES IN glycerolipid metabolic pathway; glycerophospholipid metabolic pathway; phosphatidylinositol 3-kinase signaling pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

104 kDa diacylglycerol kinase; DAG kinase zeta; DGK-IV; DGK-zeta; diglyceride kinase zeta

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DGKZ (diacylglycerol kinase zeta)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Dgkz (diacylglycerol kinase zeta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dgkz (diacylglycerol kinase zeta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DGKZ (diacylglycerol kinase zeta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DGKZ (diacylglycerol kinase zeta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dgkz (diacylglycerol kinase zeta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DGKZ (diacylglycerol kinase zeta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DGKZ (diacylglycerol kinase zeta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dgkz (diacylglycerol kinase zeta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	DGKZ (diacylglycerol kinase zeta)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dgkz (diacylglycerol kinase zeta)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dgkza (diacylglycerol kinase, zeta a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dgkzb (diacylglycerol kinase, zeta b)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	dgk-5	Alliance	DIOPT (InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	rdgA	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dgkz	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	98,359,804 - 98,401,847 (-)	NCBI		GRCr8
mRatBN7.2	3	77,904,149 - 77,946,114 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	77,904,150 - 77,946,099 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	81,379,328 - 81,409,244 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	89,978,358 - 90,008,274 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	87,829,580 - 87,859,521 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	80,844,002 - 80,886,487 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	80,844,005 - 80,875,817 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	87,542,666 - 87,584,698 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	76,312,721 - 76,342,603 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	76,209,092 - 76,238,975 (-)	NCBI
Celera	3	77,106,807 - 77,136,681 (-)	NCBI		Celera
Cytogenetic Map	3	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

congenital disorder of glycosylation type IIc (ISO)

Developmental Disabilities (ISO)

genetic disease (ISO)

Hypoxia (IEP)

infantile Refsum disease (ISO)

intellectual disability (ISO)

myocardial infarction (ISO)

Zellweger syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dinitrotoluene (EXP)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

caffeine (ISO)

camptothecin (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chloroprene (ISO)

chlorpyrifos (ISO)

copper(II) chloride (ISO)

Cuprizon (EXP)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP,ISO)

dioxygen (ISO)

disodium selenite (ISO)

doxorubicin (ISO)

ethanol (ISO)

flutamide (EXP)

fulvestrant (ISO)

gentamycin (EXP)

indometacin (EXP)

lead diacetate (ISO)

lead(0) (ISO)

methamphetamine (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine (ISO)

nefazodone (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

phenylephrine (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

propiconazole (ISO)

resveratrol (ISO)

Soman (EXP)

taurine (ISO)

tetrachloromethane (ISO)

titanium dioxide (ISO)

Tributyltin oxide (EXP)

triphenyl phosphate (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

diacylglycerol metabolic process (IBA,IEA,ISO,ISS)

glycerolipid metabolic process (IEA,ISO)

intracellular signal transduction (IBA)

lipid phosphorylation (IEA,ISO,ISS)

maintenance of postsynaptic density structure (ISO)

mitotic G1 DNA damage checkpoint signaling (ISO)

negative regulation of Ras protein signal transduction (ISO)

negative regulation of T cell receptor signaling pathway (ISO,ISS)

phosphatidic acid biosynthetic process (IBA,IEA,ISO,ISS)

phospholipase C-activating G protein-coupled receptor signaling pathway (IEA)

Ras protein signal transduction (ISO)

Cellular Component

cytosol (IEA,ISO,ISS)

glutamatergic synapse (IBA,IDA,IEP,ISO)

lamellipodium (IEA,ISO)

membrane (IBA)

nuclear speck (IEA,ISO)

nucleus (ISO)

plasma membrane (IEA)

postsynaptic density (IDA,IEP)

Schaffer collateral - CA1 synapse (ISO)

Molecular Function

alkylglycerol kinase activity (IEA)

ATP binding (IEA)

ATP-dependent diacylglycerol kinase activity (IBA,IDA,IEA,ISO)

enzyme inhibitor activity (ISO)

kinase activity (ISO)

lipid kinase activity (ISO)

metal ion binding (IEA)

protein binding (IPI,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

glycerolipid metabolic pathway (IEA)

glycerophospholipid metabolic pathway (IEA)

phosphatidylinositol 3-kinase signaling pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	A 104-kDa diacylglycerol kinase containing ankyrin-like repeats localizes in the cell nucleus.	Goto K and Kondo H, Proc Natl Acad Sci U S A 1996 Oct 1;93(20):11196-201.
4.	Gene cloning, sequence, expression and in situ localization of 80 kDa diacylglycerol kinase specific to oligodendrocyte of rat brain.	Goto K, etal., Brain Res Mol Brain Res 1992 Nov;16(1-2):75-87.
5.	KEGG: Kyoto Encyclopedia of Genes and Genomes	KEGG
6.	Synaptic removal of diacylglycerol by DGKzeta and PSD-95 regulates dendritic spine maintenance.	Kim K, etal., EMBO J. 2009 Apr 22;28(8):1170-9. doi: 10.1038/emboj.2009.44. Epub 2009 Feb 19.
7.	Diacylglycerol kinase zeta regulates phosphatidylinositol 4-phosphate 5-kinase Ialpha by a novel mechanism.	Luo B, etal., Cell Signal. 2004 Aug;16(8):891-7. doi: 10.1016/j.cellsig.2004.01.010.
8.	Gene Data Set	MGD Curation, June 12, 2002
9.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
10.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
11.	GOA pipeline	RGD automated data pipeline
12.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
14.	Cellular expression and localization of DGKzeta-interacting NAP1-like proteins in the brain and functional implications under hypoxic stress.	Takahashi N, etal., Histochem Cell Biol. 2014 Nov;142(5):461-71. doi: 10.1007/s00418-014-1226-x. Epub 2014 Jun 4.

Additional References at PubMed

PMID:12477932	PMID:14511325	PMID:15542238	PMID:15544348	PMID:15781737	PMID:15894621	PMID:16286473	PMID:16380548	PMID:17664281	PMID:18004883	PMID:19520144	PMID:19744926
PMID:21183507	PMID:21362459	PMID:21938675	PMID:22234382	PMID:22627129	PMID:23467923	PMID:27739494	PMID:30053369	PMID:34312706

Genomics

Comparative Map Data

Dgkz
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	98,359,804 - 98,401,847 (-)	NCBI		GRCr8
mRatBN7.2	3	77,904,149 - 77,946,114 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	77,904,150 - 77,946,099 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	81,379,328 - 81,409,244 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	89,978,358 - 90,008,274 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	87,829,580 - 87,859,521 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	80,844,002 - 80,886,487 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	80,844,005 - 80,875,817 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	87,542,666 - 87,584,698 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	76,312,721 - 76,342,603 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	76,209,092 - 76,238,975 (-)	NCBI
Celera	3	77,106,807 - 77,136,681 (-)	NCBI		Celera
Cytogenetic Map	3	q24	NCBI

DGKZ
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	46,332,926 - 46,380,554 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	46,332,905 - 46,380,554 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	46,354,476 - 46,402,104 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	46,311,315 - 46,358,680 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	46,323,562 - 46,358,680	NCBI
Celera	11	46,502,317 - 46,549,682 (+)	NCBI		Celera
Cytogenetic Map	11	p11.2	NCBI
HuRef	11	46,061,412 - 46,109,062 (+)	NCBI		HuRef
CHM1_1	11	46,352,750 - 46,400,540 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	46,489,001 - 46,536,630 (+)	NCBI		T2T-CHM13v2.0

Dgkz
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	91,763,167 - 91,806,788 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	91,763,169 - 91,806,209 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	91,932,822 - 91,976,443 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	91,932,824 - 91,975,864 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	91,772,979 - 91,803,720 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	91,733,665 - 91,764,438 (-)	NCBI		MGSCv36	mm8
Celera	2	93,323,226 - 93,354,092 (-)	NCBI		Celera
Cytogenetic Map	2	E1	NCBI
cM Map	2	50.63	NCBI

Dgkz
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	1,657,926 - 1,695,404 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	1,658,237 - 1,687,000 (-)	NCBI	ChiLan1.0	ChiLan1.0

DGKZ
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	48,546,486 - 48,593,658 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	48,553,316 - 48,600,485 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	46,291,592 - 46,339,127 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	46,841,605 - 46,889,763 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	46,841,605 - 46,889,763 (+)	Ensembl	panpan1.1		panPan2

DGKZ
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	43,088,169 - 43,103,820 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	43,088,525 - 43,129,294 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	41,816,433 - 41,857,562 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	43,743,999 - 43,785,151 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	43,744,000 - 43,785,151 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	43,228,986 - 43,270,069 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	42,780,862 - 42,821,933 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	43,514,095 - 43,555,174 (-)	NCBI		UU_Cfam_GSD_1.0

Dgkz
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	20,579,265 - 20,621,717 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936562	2,690,858 - 2,733,620 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936562	2,690,907 - 2,733,455 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DGKZ
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	16,134,048 - 16,176,238 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	16,134,046 - 16,176,043 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	17,480,094 - 17,495,716 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DGKZ
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	18,949,360 - 18,997,957 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	18,948,425 - 18,982,354 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	116,234,046 - 116,283,086 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dgkz
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	2,173,272 - 2,210,279 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	2,173,774 - 2,210,304 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Dgkz
181 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	256
Count of miRNA genes:	168
Interacting mature miRNAs:	192
Transcripts:	ENSRNOT00000024280
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300178	Hrtrt4	Heart rate QTL 4	3.74		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	43827364	90905114	Rat
61377	Edpm3	Estrogen-dependent pituitary mass QTL 3	7.05	0.038	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	53184692	89878207	Rat
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	70653097	121056321	Rat
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	53184593	115665732	Rat
1331795	Rf30	Renal function QTL 30	3.708		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	3	39454637	89115240	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	53184593	115665732	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
1354589	Bw31	Body weight QTL 31	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	33703347	78196190	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	47233211	147415807	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	38192233	133483320	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	29463235	118376539	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	53184593	115665732	Rat
1331777	Bw24	Body weight QTL 24	3.503		body mass (VT:0001259)	body weight (CMO:0000012)	3	39454637	89115240	Rat
1582221	Kidm30	Kidney mass QTL 30	3.5	0.0008	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	3	64655305	115665732	Rat
1581568	Rf53	Renal function QTL 53			urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	3	56395968	161299569	Rat
1582210	Bw71	Body weight QTL 71	3.3	0.0012	body mass (VT:0001259)	body weight (CMO:0000012)	3	64655305	115665732	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	61017749	121056321	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	50437504	115638231	Rat
1600376	Arunc5	Aerobic running capacity QTL 5		0.21	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	3	73376539	118376539	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	59242096	157323038	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	43827364	121056321	Rat
2292613	Ept16	Estrogen-induced pituitary tumorigenesis QTL 16	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	47233430	110362260	Rat
731180	Bp152	Blood pressure QTL 152		0.03	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	53781112	91609953	Rat
738019	Anxrr10	Anxiety related response QTL 10	3.9		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	3	38517803	83517803	Rat
631200	Cm25	Cardiac mass QTL 25	4.8	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	3	61134348	89115068	Rat
61419	Cia11	Collagen induced arthritis QTL 11	5.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	3	30356773	98535386	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	70348525	121056321	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	10861912	89878372	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	41874578	155617519	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
1354597	Kidm13	Kidney mass QTL 13	2.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	3	41874578	104104347	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	41874578	155617519	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	1	91609953	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	33703347	104104347	Rat
631665	Bw8	Body weight QTL 8	5.5		body mass (VT:0001259)	body weight (CMO:0000012)	3	50437042	119183768	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
1358186	Ept2	Estrogen-induced pituitary tumorigenesis QTL 2	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	47233430	110362260	Rat

Markers in Region

RH141843

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	77,904,240 - 77,904,422 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	80,844,088 - 80,844,269	NCBI	Rnor6.0
Rnor_5.0	3	87,542,756 - 87,542,937	UniSTS	Rnor5.0
RGSC_v3.4	3	76,312,804 - 76,312,985	UniSTS	RGSC3.4
Celera	3	77,106,890 - 77,107,071	UniSTS
Cytogenetic Map	3	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001415152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_031143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC135645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC169029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D78588	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000024280 ⟹ ENSRNOP00000024280

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	77,904,158 - 77,934,040 (-)	Ensembl
Rnor_6.0 Ensembl	3	80,844,005 - 80,873,887 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091265 ⟹ ENSRNOP00000074012

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	77,904,150 - 77,936,017 (-)	Ensembl
Rnor_6.0 Ensembl	3	80,844,033 - 80,875,817 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095998 ⟹ ENSRNOP00000087400

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	77,904,150 - 77,921,396 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112973 ⟹ ENSRNOP00000090177

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	77,904,158 - 77,934,040 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117598 ⟹ ENSRNOP00000097565

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	77,904,150 - 77,946,099 (-)	Ensembl

RefSeq Acc Id:

NM_001415152 ⟹ NP_001402081

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,359,804 - 98,391,810 (-)	NCBI
mRatBN7.2	3	77,904,149 - 77,936,156 (-)	NCBI

RefSeq Acc Id:

NM_031143 ⟹ NP_112405

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,359,804 - 98,389,702 (-)	NCBI
mRatBN7.2	3	77,904,149 - 77,934,047 (-)	NCBI
Rnor_6.0	3	80,844,005 - 80,873,887 (-)	NCBI
Rnor_5.0	3	87,542,666 - 87,584,698 (-)	NCBI
RGSC_v3.4	3	76,312,721 - 76,342,603 (-)	RGD
Celera	3	77,106,807 - 77,136,681 (-)	RGD

Sequence:

show sequence

GGAGCGGAGGCTGCTTCCCCGGCACCTGGGAGTGGGTCGCGGGGACGCGAAGGCACAGGGCGGG
CGGACGCGCCTTCGCCATGAGCTTGGCGGCGGTGCGGACCGGGCGTGCTGAGCTCCGGCCGCCG
GCCCGGCATGGGCGTCTCCCGCGAGCCCGCTGCCGGCCGGGGCTAGGGCCGGATGGAGCCGCGG
GACCCCAGCCCCGAGGCCCGGAGCAGCGACTCGGAGTCGGCCTCCGCCTCGTCCAGCGGCTCCG
AGCGCGACGCGGATCCGGAGCCGGACAAGGCTCCGCGGCGCTTAACCAAGAGGCGCTTCCCGGG
GCTGCGGCTCTTTGGGCACAGGAAAGCCATCACCAAGTCGGGCCTCCAGCACCTGGCACCCCCT
CCTCCCACGCCTGGGGCCCCGTGCGGTGAATCTGAGCGGCAGATCCGGAGTACTGTGGACTGGA
GTGAGTCAGCAGCGTATGGGGAGCACATCTGGTTTGAGACCAACGTGTCCGGAGATTTCTGCTA
TGTCGGGGAGCAGTACTGTGTAGCTAAGATGCTGCCGAAGTCAGCGCCCAGAAGAAAGTGTGCA
GCCTGTAAGATCGTGGTGCATACCCCTTGCATCGGGCAGCTGGAAAAGATCAATTTCCGCTGTA
AGCCATCCTTCCGTGAATCAGGCTCCAGGAATGTCCGTGAGCCAACCTTCGTAAGACACCACTG
GGTCCACAGGCGACGCCAGGATGGCAAGTGTCGGCACTGTGGGAAGGGCTTCCAGCAGAAGTTC
ACCTTCCACAGCAAAGAGATCGTAGCTATCAGCTGTTCCTGGTGCAAACAGGCGTACCACAGCA
AGGTGTCCTGCTTCATGCTGCAGCAGATTGAGGAGCCCTGTTCCCTAGGGGTGCATGCAGCCGT
GGTCATCCCACCCACCTGGATCCTACGGGCCCGGAGGCCCCAGAACACCCTCAAGGCCAGCAAG
AAGAAAAAGAGAGCATCCTTCAAAAGGAGATCCAGTAAGAAAGGACCTGAGGAAGGCCGCTGGA
GACCCTTCATCATCAGGCCCACCCCGTCCCCCCTCATGAAGCCCCTGCTAGTGTTTGTAAACCC
CAAGAGTGGGGGTAACCAGGGCGCTAAGATCATCCAGTCTTTTCTGTGGTATCTGAACCCCCGG
CAAGTCTTCGATCTGAGCCAGGGAGGACCCAGGGAAGCGCTGGAAATGTACCGCAAAGTCCATA
ATTTGAGGATTCTGGCTTGCGGGGGTGATGGCACGGTTGGCTGGATTCTTTCCACCCTAGACCA
GCTGCGCTTAAAACCACCACCTCCTGTGGCCATCCTGCCCCTGGGCACTGGCAATGACCTGGCC
CGAACTCTCAACTGGGGTGGGGGTTACACAGATGAGCCAGTGTCAAAGATCCTTTCCCATGTAG
AGGAGGGGAACGTGGTACAGCTGGACCGTTGGGACCTCCGAGCAGAGCCCAACCCTGAGGCAGG
GCCTGAGGAGCGAGATGACGGAGCCACTGACCGGCTGCCCCTGGATGTCTTCAACAACTACTTC
AGTCTGGGCTTTGATGCCCACGTCACCCTGGAGTTTCATGAGTCTCGAGAAGCCAACCCAGAGA
AGTTCAACAGCCGCTTTCGGAATAAGATGTTCTATGCTGGGACAGCCTTCTCTGACTTCCTGAT
GGGCAGCTCCAAGGACTTAGCCAAGCACATCCGAGTAGTGTGTGACGGAATGGACCTAACCCCC
AAGATTCAGGACCTGAAACCGCAGTGCATAGTCTTTCTGAATATCCCCAGGTACTGTGCAGGCA
CCATGCCCTGGGGCCACCCTGGGGAGCACCATGACTTCGAGCCCCAGAGGCACGATGATGGCTA
CCTCGAGGTCATCGGCTTCACCATGACATCCTTGGCCGCATTGCAGGTGGGTGGACACGGCGAG
CGGCTGACCCAGTGCCGAGAAGTGCTGCTCACCACTGCCAAGGCCATCCCTGTGCAGGTGGATG
GTGAACCCTGCAAGCTTGCAGCATCGCGGATTCGAATTGCCCTGCGCAACCAGGCCACTATGGT
GCAGAAGGCCAAGCGCCGGAGTACTGCCCCACTGCACAGCGATCAGCAGCCAGTTCCTGAGCAG
CTGAGGATCCAAGTGAGCAGGGTCAGCATGCACGACTACGAGGCTCTCCATTATGACAAGGAGC
AGCTCAAGGAGGCCTCTGTGCCTCTGGGTACTGTGGTGGTCCCCGGAGACAGTGACCTAGAGCT
CTGCCGAGCCCACATTGAGAGACTCCAGCAGGAGCCCGATGGGGCTGGAGCCAAGTCCCCCATG
TGCCACCCACTGTCCTCCAAGTGGTGTTTCCTGGACGCCACCACTGCCAGCCGCTTCTACAGGA
TCGACAGGGCCCAGGAGCACCTCAACTATGTGACGGAGATTGCCCAGGATGAGATTTATATCCT
AGACCCAGAGCTGCTGGGTGCATCAGCCCGACCTGACCTCCCTACCCCTACCTCCCCGCTCCCT
GCCTCCCCCTGCTCCCCTACACCCGGGTCACTGCAGGGGGATGCCGCACTGCCCCAAGGTGAAG
AGCTGATTGAAGCTGCCAAGAGGAATGACTTCTGCAAGCTCCAGGAACTACACCGAGCAGGAGG
TGACCTCATGCACCGCGACCATCAGAGCCGCACACTCCTGCACCACGCAGTCAGCACTGGCAGT
AAGGAAGTGGTCCGCTATCTGCTCGATCATGCACCACCAGAGATCCTCGATGCTGTGGAGGAGA
ACGGGGAGACCTGTCTACACCAGGCAGCCGCCCTAGGTCAGCGCACCATCTGCCACTACATTGT
GGAAGCCGGGGCCTCCCTCATGAAGACAGATCAGCAGGGCGACACTCCCAGGCAGCGAGCTGAG
AAGGCTCAAGACACAGAGCTAGCTGCATACCTGGAGAACAGACAACATTACCAGATGATCCAAC
GTGAGGACCAGGAGACAGCTGTGTAGTTAAGGGGACCATGGATCAACGAGGGACACTACCAGAG
GACTAGAGCTCTCCTTGCCCATCTCACTGCCACATTCCTGTCAGATGGCTATGGGGGGACCCTG
TCACAGGGAAGGAGCCCCGTGCCACCCCCTGAGAAGCCGTTCAGATCTAGGGCTGGACTCTAAG
GAGCTGGACTCTCACCTGTCCCTGGTTTCATGGGGAACAGGAAACAAGCTGGGCTGACTGGGTC
CCTCCCTTCAGGCGGCCTCCCCCTCACCACAGCTGATGGAATGGCTGGACAGCTCAGTCAGGGA
GGCCTGCTCTCAGCAGGACTTTCTAAAGCCACCTGATCCCTTGGGCTCTTTGGAAGGTTCTGGG
TGCCTAGCCCTCCTCTCTGACCCACACACCTTGGGCATCCCAGAAACTCAAGAGCCTGCTGTAT
TTGCCTGCCCGCTGCCCTGCTTGGCACCTACCCTGGTGATCCTCCTCATGCACCCAGTCATTTC
ATTTCCGACTGTATGGCCTGGGGTGGGGGGTGGGGCTCCCACGGTGACTTGTTTACAGCTGGGT
GTGACTCAGTAAAGTGAAGTTTTTTTCCTTAAAAAAAGCG

hide sequence

RefSeq Acc Id:

XM_006234594 ⟹ XP_006234656

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,359,812 - 98,377,089 (-)	NCBI
mRatBN7.2	3	77,904,157 - 77,921,306 (-)	NCBI
Rnor_6.0	3	80,844,002 - 80,861,262 (-)	NCBI
Rnor_5.0	3	87,542,666 - 87,584,698 (-)	NCBI

Sequence:

show sequence

CAGGAGCCACCACTGGGAGAGGAAGTGCAGTCGGTTACCAATTGGGCTATTTTCATAACGGTTG
TCTCCAGCTTGGGGGAGGGTAGTGAGGGGGAGGGGGCAGAGACACAGCCACTGCAGCCAGCTCT
CCAAACTAGGACTTGCTCTGCAGAGTCCGCAATCCAAGCAAACTGGAGCAAGAGCGGAGGCGCC
TGGGACCCCAGTCCCCACCTGCTTGTCCACCTCTTGCCTGCTGCCTTGCCTTCCAGATCAGCCC
CTGGCATGGAGACCTTCTTTAGGAAGCATTTCCAGCGAAAGGCACCAGGCCCTGGAGAGAGGCA
GCGGAGGTCCAGTGGCATGGGGCTGCCCACAGGCAAAGCTCGGCGCCGCTCCCCTGCAGGGCAG
GCCTCGTCTTCACTGGCCCAGAGGCGCCGCTCCAGTGCACAGCTCCAGGGCTGTTTTCCCAGCT
GCGGGGTGGGCACAAGAGGTGCCAGCCGCAGGCGCTCCAGCACTGCACCCCCTACCTGCAATCC
CCGCTTCATGGTGGATGTGGTGCCAACCCTACAGCCTGCCACTGTTGGGGCCCAGCTTCTGGGT
GCACCCCTGCTGTTGGCTGGGCTCATGAGCATGAAGGAGGAGGAGGAAGGGGCCCAGGAGGGAG
ACGAGACAGCTGAGGTATCAAGTGATGCCAAGCCAGGTACCAGGACCACGCCCTTCTCACACCA
GGGCTCCTGGCCATTGCTTCCCATGCCTCGCTGCCTGCGCCGAGCCTCCTCATACCTGCTCCCT
GCTGATGTGGAGTGTGGCCATACTCTTTGGGGCCTGCATGGCCACTATCGTCGCCTCAGCCAGC
GGTGGCCCTCAGGCCAGCACCCTGGTCTTGGAGGCCGAAGCCCAAGAGTCTCGGGCGCTGCAGC
AGGTCCCATGATCCCAGCCCGGGTGCGCCCGCTGTCTCGCAGACGCCAGGTAGCTCTAAGGCGG
AAGTCAGCTGGACCCCAGCCCTGGAACACCCTGCTTATGAAAGCCATCACCAAGTCGGGCCTCC
AGCACCTGGCACCCCCTCCTCCCACGCCTGGGGCCCCGTGCGGTGAATCTGAGCGGCAGATCCG
GAGTACTGTGGACTGGAGTGAGTCAGCAGCGTATGGGGAGCACATCTGGTTTGAGACCAACGTG
TCCGGAGATTTCTGCTATGTCGGGGAGCAGTACTGTGTAGCTAAGATGCTGCCGAAGTCAGCGC
CCAGAAGAAAGTGTGCAGCCTGTAAGATCGTGGTGCATACCCCTTGCATCGGGCAGCTGGAAAA
GATCAATTTCCGCTGTAAGCCATCCTTCCGTGAATCAGGCTCCAGGAATGTCCGTGAGCCAACC
TTCGTAAGACACCACTGGGTCCACAGGCGACGCCAGGATGGCAAGTGTCGGCACTGTGGGAAGG
GCTTCCAGCAGAAGTTCACCTTCCACAGCAAAGAGATCGTAGCTATCAGCTGTTCCTGGTGCAA
ACAGGCGTACCACAGCAAGGTGTCCTGCTTCATGCTGCAGCAGATTGAGGAGCCCTGTTCCCTA
GGGGTGCATGCAGCCGTGGTCATCCCACCCACCTGGATCCTACGGGCCCGGAGGCCCCAGAACA
CCCTCAAGGCCAGCAAGAAGAAAAAGAGAGCATCCTTCAAAAGGAGATCCAGTAAGAAAGGACC
TGAGGAAGGCCGCTGGAGACCCTTCATCATCAGGCCCACCCCGTCCCCCCTCATGAAGCCCCTG
CTAGTGTTTGTAAACCCCAAGAGTGGGGGTAACCAGGGCGCTAAGATCATCCAGTCTTTTCTGT
GGTATCTGAACCCCCGGCAAGTCTTCGATCTGAGCCAGGGAGGACCCAGGGAAGCGCTGGAAAT
GTACCGCAAAGTCCATAATTTGAGGATTCTGGCTTGCGGGGGTGATGGCACGGTTGGCTGGATT
CTTTCCACCCTAGACCAGCTGCGCTTAAAACCACCACCTCCTGTGGCCATCCTGCCCCTGGGCA
CTGGCAATGACCTGGCCCGAACTCTCAACTGGGGTGGGGGTTACACAGATGAGCCAGTGTCAAA
GATCCTTTCCCATGTAGAGGAGGGGAACGTGGTACAGCTGGACCGTTGGGACCTCCGAGCAGAG
CCCAACCCTGAGGCAGGGCCTGAGGAGCGAGATGACGGAGCCACTGACCGGCTGCCCCTGGATG
TCTTCAACAACTACTTCAGTCTGGGCTTTGATGCCCACGTCACCCTGGAGTTTCATGAGTCTCG
AGAAGCCAACCCAGAGAAGTTCAACAGCCGCTTTCGGAATAAGATGTTCTATGCTGGGACGGCC
TTCTCTGACTTCCTGATGGGCAGCTCCAAGGACTTAGCCAAGCACATCCGAGTAGTGTGTGACG
GAATGGACCTAACCCCCAAGATTCAGGACCTGAAACCGCAGTGCATAGTCTTTCTGAATATCCC
CAGGTACTGTGCAGGCACCATGCCCTGGGGCCACCCTGGGGAGCACCATGACTTCGAGCCCCAG
AGGCACGATGATGGCTACCTCGAGGTCATCGGCTTCACCATGACATCCTTGGCCGCATTGCAGG
TGGGTGGACACGGCGAGCGGCTGACCCAGTGCCGAGAAGTGCTGCTCACCACTGCCAAGGCCAT
CCCTGTGCAGGTGGATGGTGAACCCTGCAAGCTTGCAGCATCGCGGATTCGAATTGCCCTGCGC
AACCAGGCCACTATGGTGCAGAAGGCCAAGCGCCGGAGTACTGCCCCACTGCACAGCGATCAGC
AGCCAGTTCCTGAGCAGCTGAGGATCCAAGTGAGCAGGGTCAGCATGCACGACTACGAGGCTCT
CCATTATGACAAGGAGCAGCTCAAGGAGGCCTCTGTGCCTCTGGGTACTGTGGTGGTCCCCGGA
GACAGTGACCTAGAGCTCTGCCGAGCCCACATTGAGAGACTCCAGCAGGAGCCCGATGGGGCTG
GAGCCAAGTCCCCCATGTGCCACCCACTGTCCTCCAAGTGGTGTTTCCTGGACGCCACCACTGC
CAGCCGCTTCTACAGGATCGACAGGGCCCAGGAGCACCTCAACTATGTGACGGAGATTGCCCAG
GATGAGATTTATATCCTAGACCCAGAGCTGCTGGGTGCATCAGCCCGACCTGACCTCCCTACCC
CTACCTCCCCGCTCCCTGCCTCCCCCTGCTCCCCTACACCCGGGTCACTGCAGGGGGATGCCGC
ACTGCCCCAAGGTGAAGAGCTGATTGAAGCTGCCAAGAGGAATGACTTCTGCAAGCTCCAGGAA
CTACACCGAGCAGGAGGTGACCTCATGCACCGCGACCATCAGAGCCGCACACTCCTGCACCACG
CAGTCAGCACTGGCAGTAAGGAAGTGGTCCGCTATCTGCTCGATCATGCACCACCAGAGATCCT
CGATGCTGTGGAGGAGAACGGGGAGACCTGTCTACACCAGGCAGCCGCCCTAGGTCAGCGCACC
ATCTGCCACTACATTGTGGAAGCCGGGGCCTCCCTCATGAAGACAGATCAGCAGGGCGACACTC
CCAGGCAGCGAGCTGAGAAGGCTCAAGACACAGAGCTAGCTGCATACCTGGAGAACAGACAACA
TTACCAGATGATCCAACGTGAGGACCAGGAGACAGCTGTGTAGTTAAGGGGACCATGGATCAAC
GAGGGACACTACCAGAGGACTAGAGCTCTCCTTGCCCATCTCACTGCCACATTCCTGTCAGATG
GCTATGGGGGGACCCTGTCACAGGGAAGGAGCCCCGTGCCACCCCCTGAGAAGCCGTTCAGATC
TAGGGCTGGACTCTAAGGAGCTGGACTCTCACCTGTCCCTGGTTTCATGGGGAACAGGAAACAA
GCTGGGCTGACTGGGTCCCTCCCTTCAGGGCGGCCTCCCCCTCACCACAGCTGATGGAATGGCT
GGACAGCTCAGTCAGGGAGGCCTGCTCTCAGCAGGACTTTCTAAAGCCACCTGATCCCTTGGGC
TCTTTGGAAGGTTCTGGGTGCCTAGCCCTCCTCTCTGACCCACACACCTTGGGCATCCCAGAAA
CTCAAGAGCCTGCTGTATTTGCCTGCCCGCTGCCCTGCTTGGCACCTACCCTGGTGATCCTCCT
CATGCACCCAGTCATTTCATTTCCGACTGTATGGCCTGGGGTGGGGGGTGGGGCTCCCACGGTG
ACTTGTTTACAGCTGGGTGTGACTCAGTAAAGTGAAGTTTTTTTCCTTTCT

hide sequence

RefSeq Acc Id:

XM_017592062 ⟹ XP_017447551

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,359,812 - 98,401,847 (-)	NCBI
mRatBN7.2	3	77,904,151 - 77,946,114 (-)	NCBI
Rnor_6.0	3	80,844,002 - 80,886,487 (-)	NCBI

Sequence:

show sequence

AGCCTATACCAGTACCCGCCAGGGGCACAGAGGTGGGCCAGGGAAAGGTCCTGCACCCTGGCCT
GGAGCCCCCAGAGAGGTTGGTTGCCGTGGCCCGCTGCTCCGGGCTCGCTCTCCCGGGGCCCTGG
GTCGATCAGGCAGGGCGAGGTGGCGTCCTCCCCTCGGACCCTACGGCTTGGCGAGTGTCTCTAA
GGTGACACCCCGGTGCCTAGTGGCTGCGGCGACAGCTACAAGGCTCCGGCTTGGTTAGACCTCA
GGCTCTGGCCGTCCGGGGATCGCCCCGGCAGCGCCCCACGCAGCATCCCGACCCTTCCAAGGAC
ACAGTCTCCCCAGGGCTCCGGAGCATCCCTGCCGGCCTTTCTTAGGCGCGGCGCCCCGCAGCTC
CCGGCCCCTGTCGTCTGGGCGCCGCGTCACGACGGACGTGCGGGACCCAGAGCCTCTTTGCTTG
GTCCGGGCCCGGTGTCCCTGGCTTGGGCGCGCTCGAGACTGAACTTTGGCGGGTTCTCCAGCAG
GCCTCGGGGCACGGAGCCGGGACGCAGAAGGATGGCTGAGGGACCGGGGGGAGGAGGACAGCGC
GGGGACAGGGCAGCCAGCGGCCGGGCAGCGGAGGAGGAGGAGGTGGTGCGGCGGCGCTGCCGGC
GCGGGGAGGAGGCCGAGGTCTTCCAGCCCAGGCCCGAGGGTCCCCGAAGTGTGGCTTCGGGACC
TCTGGTAGAAGAGCGATTCAGCCAGATGCACCTTCGAAAGCAGGTGTCATACAGGAAAGCCATC
ACCAAGTCGGGCCTCCAGCACCTGGCACCCCCTCCTCCCACGCCTGGGGCCCCGTGCGGTGAAT
CTGAGCGGCAGATCCGGAGTACTGTGGACTGGAGTGAGTCAGCAGCGTATGGGGAGCACATCTG
GTTTGAGACCAACGTGTCCGGAGATTTCTGCTATGTCGGGGAGCAGTACTGTGTAGCTAAGATG
CTGCCGAAGTCAGCGCCCAGAAGAAAGTGTGCAGCCTGTAAGATCGTGGTGCATACCCCTTGCA
TCGGGCAGCTGGAAAAGATCAATTTCCGCTGTAAGCCATCCTTCCGTGAATCAGGCTCCAGGAA
TGTCCGTGAGCCAACCTTCGTAAGACACCACTGGGTCCACAGGCGACGCCAGGATGGCAAGTGT
CGGCACTGTGGGAAGGGCTTCCAGCAGAAGTTCACCTTCCACAGCAAAGAGATCGTAGCTATCA
GCTGTTCCTGGTGCAAACAGGCGTACCACAGCAAGGTGTCCTGCTTCATGCTGCAGCAGATTGA
GGAGCCCTGTTCCCTAGGGGTGCATGCAGCCGTGGTCATCCCACCCACCTGGATCCTACGGGCC
CGGAGGCCCCAGAACACCCTCAAGGCCAGCAAGAAGAAAAAGAGAGCATCCTTCAAAAGGAGAT
CCAGTAAGAAAGGACCTGAGGAAGGCCGCTGGAGACCCTTCATCATCAGGCCCACCCCGTCCCC
CCTCATGAAGCCCCTGCTAGTGTTTGTAAACCCCAAGAGTGGGGGTAACCAGGGCGCTAAGATC
ATCCAGTCTTTTCTGTGGTATCTGAACCCCCGGCAAGTCTTCGATCTGAGCCAGGGAGGACCCA
GGGAAGCGCTGGAAATGTACCGCAAAGTCCATAATTTGAGGATTCTGGCTTGCGGGGGTGATGG
CACGGTTGGCTGGATTCTTTCCACCCTAGACCAGCTGCGCTTAAAACCACCACCTCCTGTGGCC
ATCCTGCCCCTGGGCACTGGCAATGACCTGGCCCGAACTCTCAACTGGGGTGGGGGTTACACAG
ATGAGCCAGTGTCAAAGATCCTTTCCCATGTAGAGGAGGGGAACGTGGTACAGCTGGACCGTTG
GGACCTCCGAGCAGAGCCCAACCCTGAGGCAGGGCCTGAGGAGCGAGATGACGGAGCCACTGAC
CGGCTGCCCCTGGATGTCTTCAACAACTACTTCAGTCTGGGCTTTGATGCCCACGTCACCCTGG
AGTTTCATGAGTCTCGAGAAGCCAACCCAGAGAAGTTCAACAGCCGCTTTCGGAATAAGATGTT
CTATGCTGGGACGGCCTTCTCTGACTTCCTGATGGGCAGCTCCAAGGACTTAGCCAAGCACATC
CGAGTAGTGTGTGACGGAATGGACCTAACCCCCAAGATTCAGGACCTGAAACCGCAGTGCATAG
TCTTTCTGAATATCCCCAGGTACTGTGCAGGCACCATGCCCTGGGGCCACCCTGGGGAGCACCA
TGACTTCGAGCCCCAGAGGCACGATGATGGCTACCTCGAGGTCATCGGCTTCACCATGACATCC
TTGGCCGCATTGCAGGTGGGTGGACACGGCGAGCGGCTGACCCAGTGCCGAGAAGTGCTGCTCA
CCACTGCCAAGGCCATCCCTGTGCAGGTGGATGGTGAACCCTGCAAGCTTGCAGCATCGCGGAT
TCGAATTGCCCTGCGCAACCAGGCCACTATGGTGCAGAAGGCCAAGCGCCGGAGTACTGCCCCA
CTGCACAGCGATCAGCAGCCAGTTCCTGAGCAGCTGAGGATCCAAGTGAGCAGGGTCAGCATGC
ACGACTACGAGGCTCTCCATTATGACAAGGAGCAGCTCAAGGAGGCCTCTGTGCCTCTGGGTAC
TGTGGTGGTCCCCGGAGACAGTGACCTAGAGCTCTGCCGAGCCCACATTGAGAGACTCCAGCAG
GAGCCCGATGGGGCTGGAGCCAAGTCCCCCATGTGCCACCCACTGTCCTCCAAGTGGTGTTTCC
TGGACGCCACCACTGCCAGCCGCTTCTACAGGATCGACAGGGCCCAGGAGCACCTCAACTATGT
GACGGAGATTGCCCAGGATGAGATTTATATCCTAGACCCAGAGCTGCTGGGTGCATCAGCCCGA
CCTGACCTCCCTACCCCTACCTCCCCGCTCCCTGCCTCCCCCTGCTCCCCTACACCCGGGTCAC
TGCAGGGGGATGCCGCACTGCCCCAAGGTGAAGAGCTGATTGAAGCTGCCAAGAGGAATGACTT
CTGCAAGCTCCAGGAACTACACCGAGCAGGAGGTGACCTCATGCACCGCGACCATCAGAGCCGC
ACACTCCTGCACCACGCAGTCAGCACTGGCAGTAAGGAAGTGGTCCGCTATCTGCTCGATCATG
CACCACCAGAGATCCTCGATGCTGTGGAGGAGAACGGGGAGACCTGTCTACACCAGGCAGCCGC
CCTAGGTCAGCGCACCATCTGCCACTACATTGTGGAAGCCGGGGCCTCCCTCATGAAGACAGAT
CAGCAGGGCGACACTCCCAGGCAGCGAGCTGAGAAGGCTCAAGACACAGAGCTAGCTGCATACC
TGGAGAACAGACAACATTACCAGATGATCCAACGTGAGGACCAGGAGACAGCTGTGTAGTTAAG
GGGACCATGGATCAACGAGGGACACTACCAGAGGACTAGAGCTCTCCTTGCCCATCTCACTGCC
ACATTCCTGTCAGATGGCTATGGGGGGACCCTGTCACAGGGAAGGAGCCCCGTGCCACCCCCTG
AGAAGCCGTTCAGATCTAGGGCTGGACTCTAAGGAGCTGGACTCTCACCTGTCCCTGGTTTCAT
GGGGAACAGGAAACAAGCTGGGCTGACTGGGTCCCTCCCTTCAGGGCGGCCTCCCCCTCACCAC
AGCTGATGGAATGGCTGGACAGCTCAGTCAGGGAGGCCTGCTCTCAGCAGGACTTTCTAAAGCC
ACCTGATCCCTTGGGCTCTTTGGAAGGTTCTGGGTGCCTAGCCCTCCTCTCTGACCCACACACC
TTGGGCATCCCAGAAACTCAAGAGCCTGCTGTATTTGCCTGCCCGCTGCCCTGCTTGGCACCTA
CCCTGGTGATCCTCCTCATGCACCCAGTCATTTCATTTCCGACTGTATGGCCTGGGGTGGGGGG
TGGGGCTCCCACGGTGACTTGTTTACAGCTGGGTGTGACTCAGTAAAGTGAAGTTTTTTTCCTT
TCT

hide sequence

RefSeq Acc Id:

XM_039105924 ⟹ XP_038961852

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,361,252 - 98,373,328 (-)	NCBI
mRatBN7.2	3	77,905,553 - 77,918,115 (-)	NCBI

RefSeq Acc Id:

XM_039105926 ⟹ XP_038961854

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,359,812 - 98,391,604 (-)	NCBI
mRatBN7.2	3	77,904,151 - 77,935,942 (-)	NCBI

RefSeq Acc Id:

XM_063284642 ⟹ XP_063140712

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,359,812 - 98,377,072 (-)	NCBI

RefSeq Acc Id:

XR_005501992

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,365,697 - 98,373,764 (-)	NCBI
mRatBN7.2	3	77,910,042 - 77,918,119 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001402081	(Get FASTA)	NCBI Sequence Viewer
	NP_001416441	(Get FASTA)	NCBI Sequence Viewer
	NP_001416442	(Get FASTA)	NCBI Sequence Viewer
	NP_112405	(Get FASTA)	NCBI Sequence Viewer
	XP_006234656	(Get FASTA)	NCBI Sequence Viewer
	XP_017447551	(Get FASTA)	NCBI Sequence Viewer
	XP_038961852	(Get FASTA)	NCBI Sequence Viewer
	XP_038961854	(Get FASTA)	NCBI Sequence Viewer
	XP_063140712	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAA18942	(Get FASTA)	NCBI Sequence Viewer
	EDL79551	(Get FASTA)	NCBI Sequence Viewer
	EDL79552	(Get FASTA)	NCBI Sequence Viewer
	EDL79553	(Get FASTA)	NCBI Sequence Viewer
	EDL79554	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000024280.2
	ENSRNOP00000074012.2
	ENSRNOP00000087400.1
	ENSRNOP00000090177.1
	ENSRNOP00000097565.1
	ENSRNOP00055022602
	ENSRNOP00060013951
	ENSRNOP00065034147
GenBank Protein	O08560	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_112405 ⟸ NM_031143
- Peptide Label:	isoform 2
- UniProtKB:	O08560 (UniProtKB/Swiss-Prot), A6HNF1 (UniProtKB/TrEMBL), A0A8I6AMI5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEPRDPSPEARSSDSESASASSSGSERDADPEPDKAPRRLTKRRFPGLRLFGHRKAITKSGLQH LAPPPPTPGAPCGESERQIRSTVDWSESAAYGEHIWFETNVSGDFCYVGEQYCVAKMLPKSAPR RKCAACKIVVHTPCIGQLEKINFRCKPSFRESGSRNVREPTFVRHHWVHRRRQDGKCRHCGKGF QQKFTFHSKEIVAISCSWCKQAYHSKVSCFMLQQIEEPCSLGVHAAVVIPPTWILRARRPQNTL KASKKKKRASFKRRSSKKGPEEGRWRPFIIRPTPSPLMKPLLVFVNPKSGGNQGAKIIQSFLWY LNPRQVFDLSQGGPREALEMYRKVHNLRILACGGDGTVGWILSTLDQLRLKPPPPVAILPLGTG NDLARTLNWGGGYTDEPVSKILSHVEEGNVVQLDRWDLRAEPNPEAGPEERDDGATDRLPLDVF NNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGTAFSDFLMGSSKDLAKHIRVVCDGM DLTPKIQDLKPQCIVFLNIPRYCAGTMPWGHPGEHHDFEPQRHDDGYLEVIGFTMTSLAALQVG GHGERLTQCREVLLTTAKAIPVQVDGEPCKLAASRIRIALRNQATMVQKAKRRSTAPLHSDQQP VPEQLRIQVSRVSMHDYEALHYDKEQLKEASVPLGTVVVPGDSDLELCRAHIERLQQEPDGAGA KSPMCHPLSSKWCFLDATTASRFYRIDRAQEHLNYVTEIAQDEIYILDPELLGASARPDLPTPT SPLPASPCSPTPGSLQGDAALPQGEELIEAAKRNDFCKLQELHRAGGDLMHRDHQSRTLLHHAV STGSKEVVRYLLDHAPPEILDAVEENGETCLHQAAALGQRTICHYIVEAGASLMKTDQQGDTPR QRAEKAQDTELAAYLENRQHYQMIQREDQETAV hide sequence

RefSeq Acc Id:

XP_006234656 ⟸ XM_006234594

- Peptide Label:

isoform X1

- Sequence:

show sequence

METFFRKHFQRKAPGPGERQRRSSGMGLPTGKARRRSPAGQASSSLAQRRRSSAQLQGCFPSCG
VGTRGASRRRSSTAPPTCNPRFMVDVVPTLQPATVGAQLLGAPLLLAGLMSMKEEEEGAQEGDE
TAEVSSDAKPGTRTTPFSHQGSWPLLPMPRCLRRASSYLLPADVECGHTLWGLHGHYRRLSQRW
PSGQHPGLGGRSPRVSGAAAGPMIPARVRPLSRRRQVALRRKSAGPQPWNTLLMKAITKSGLQH
LAPPPPTPGAPCGESERQIRSTVDWSESAAYGEHIWFETNVSGDFCYVGEQYCVAKMLPKSAPR
RKCAACKIVVHTPCIGQLEKINFRCKPSFRESGSRNVREPTFVRHHWVHRRRQDGKCRHCGKGF
QQKFTFHSKEIVAISCSWCKQAYHSKVSCFMLQQIEEPCSLGVHAAVVIPPTWILRARRPQNTL
KASKKKKRASFKRRSSKKGPEEGRWRPFIIRPTPSPLMKPLLVFVNPKSGGNQGAKIIQSFLWY
LNPRQVFDLSQGGPREALEMYRKVHNLRILACGGDGTVGWILSTLDQLRLKPPPPVAILPLGTG
NDLARTLNWGGGYTDEPVSKILSHVEEGNVVQLDRWDLRAEPNPEAGPEERDDGATDRLPLDVF
NNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGTAFSDFLMGSSKDLAKHIRVVCDGM
DLTPKIQDLKPQCIVFLNIPRYCAGTMPWGHPGEHHDFEPQRHDDGYLEVIGFTMTSLAALQVG
GHGERLTQCREVLLTTAKAIPVQVDGEPCKLAASRIRIALRNQATMVQKAKRRSTAPLHSDQQP
VPEQLRIQVSRVSMHDYEALHYDKEQLKEASVPLGTVVVPGDSDLELCRAHIERLQQEPDGAGA
KSPMCHPLSSKWCFLDATTASRFYRIDRAQEHLNYVTEIAQDEIYILDPELLGASARPDLPTPT
SPLPASPCSPTPGSLQGDAALPQGEELIEAAKRNDFCKLQELHRAGGDLMHRDHQSRTLLHHAV
STGSKEVVRYLLDHAPPEILDAVEENGETCLHQAAALGQRTICHYIVEAGASLMKTDQQGDTPR
QRAEKAQDTELAAYLENRQHYQMIQREDQETAV

hide sequence

RefSeq Acc Id:

XP_017447551 ⟸ XM_017592062

- Peptide Label:

isoform X3

- Sequence:

show sequence

MAEGPGGGGQRGDRAASGRAAEEEEVVRRRCRRGEEAEVFQPRPEGPRSVASGPLVEERFSQMH
LRKQVSYRKAITKSGLQHLAPPPPTPGAPCGESERQIRSTVDWSESAAYGEHIWFETNVSGDFC
YVGEQYCVAKMLPKSAPRRKCAACKIVVHTPCIGQLEKINFRCKPSFRESGSRNVREPTFVRHH
WVHRRRQDGKCRHCGKGFQQKFTFHSKEIVAISCSWCKQAYHSKVSCFMLQQIEEPCSLGVHAA
VVIPPTWILRARRPQNTLKASKKKKRASFKRRSSKKGPEEGRWRPFIIRPTPSPLMKPLLVFVN
PKSGGNQGAKIIQSFLWYLNPRQVFDLSQGGPREALEMYRKVHNLRILACGGDGTVGWILSTLD
QLRLKPPPPVAILPLGTGNDLARTLNWGGGYTDEPVSKILSHVEEGNVVQLDRWDLRAEPNPEA
GPEERDDGATDRLPLDVFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGTAFSDFL
MGSSKDLAKHIRVVCDGMDLTPKIQDLKPQCIVFLNIPRYCAGTMPWGHPGEHHDFEPQRHDDG
YLEVIGFTMTSLAALQVGGHGERLTQCREVLLTTAKAIPVQVDGEPCKLAASRIRIALRNQATM
VQKAKRRSTAPLHSDQQPVPEQLRIQVSRVSMHDYEALHYDKEQLKEASVPLGTVVVPGDSDLE
LCRAHIERLQQEPDGAGAKSPMCHPLSSKWCFLDATTASRFYRIDRAQEHLNYVTEIAQDEIYI
LDPELLGASARPDLPTPTSPLPASPCSPTPGSLQGDAALPQGEELIEAAKRNDFCKLQELHRAG
GDLMHRDHQSRTLLHHAVSTGSKEVVRYLLDHAPPEILDAVEENGETCLHQAAALGQRTICHYI
VEAGASLMKTDQQGDTPRQRAEKAQDTELAAYLENRQHYQMIQREDQETAV

hide sequence

Ensembl Acc Id:

ENSRNOP00000024280 ⟸ ENSRNOT00000024280

Ensembl Acc Id:

ENSRNOP00000074012 ⟸ ENSRNOT00000091265

RefSeq Acc Id:	XP_038961854 ⟸ XM_039105926
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AMI5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961852 ⟸ XM_039105924
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSRNOP00000097565 ⟸ ENSRNOT00000117598

Ensembl Acc Id:

ENSRNOP00000087400 ⟸ ENSRNOT00000095998

Ensembl Acc Id:

ENSRNOP00000090177 ⟸ ENSRNOT00000112973

RefSeq Acc Id:	NP_001402081 ⟸ NM_001415152
- Peptide Label:	isoform 1
- UniProtKB:	A0A0G2K707 (UniProtKB/TrEMBL), A0A8I6AMI5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140712 ⟸ XM_063284642
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A444 (UniProtKB/TrEMBL), A6HNF2 (UniProtKB/TrEMBL)

Protein Domains

DAGKc

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-O08560-F1-model_v2	AlphaFold	O08560	1-929	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692222

Promoter ID:

EPDNEW_R2745

Type:

multiple initiation site

Name:

Dgkz_1

Description:

diacylglycerol kinase zeta

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	80,873,894 - 80,873,954	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:70929	AgrOrtholog
BioCyc Gene	G2FUF-48716	BioCyc
Ensembl Genes	ENSRNOG00000017737	Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSRNOG00055016451	UniProtKB/Swiss-Prot
	ENSRNOG00060010508	UniProtKB/Swiss-Prot
	ENSRNOG00065024021	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000024280.5	UniProtKB/Swiss-Prot
	ENSRNOT00000091265.2	UniProtKB/TrEMBL
	ENSRNOT00000095998.1	UniProtKB/TrEMBL
	ENSRNOT00000112973.1	UniProtKB/TrEMBL
	ENSRNOT00000117598.1	UniProtKB/TrEMBL
	ENSRNOT00055028087	UniProtKB/Swiss-Prot
	ENSRNOT00060017946	UniProtKB/Swiss-Prot
	ENSRNOT00065041777	UniProtKB/Swiss-Prot
Gene3D-CATH	1.25.40.20	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	2.60.200.40	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ATP-NAD_kinase_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	C1_DGKzeta_rpt1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	C1_DGKzeta_rpt2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DGK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Diacylglycerol_kin_accessory	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Diacylglycerol_kinase_cat_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NAD/diacylglycerol_kinase_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PE/DAG-bd	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:81821	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	81821	ENTREZGENE
PANTHER	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED	UniProtKB/TrEMBL
	DIACYLGLYCEROL KINASE ZETA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	L-ASPARAGINASE	UniProtKB/TrEMBL
	PTHR11255	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	C1_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DAGK_acc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DAGK_cat	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Dgkz	PhenoGen
PROSITE	ANK_REP_REGION	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DAGK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000017737	RatGTEx
	ENSRNOG00055016451	RatGTEx
	ENSRNOG00060010508	RatGTEx
	ENSRNOG00065024021	RatGTEx
SMART	ANK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DAGKa	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DAGKc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SM00109	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF111331	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF48403	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2K707	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A444	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AMI5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GM44	ENTREZGENE, UniProtKB/TrEMBL
	A6HNF1	ENTREZGENE, UniProtKB/TrEMBL
	A6HNF2	ENTREZGENE, UniProtKB/TrEMBL
	A6HNF3_RAT	UniProtKB/TrEMBL
	DGKZ_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2002-07-09	Dgkz	diacylglycerol kinase zeta			Symbol and Name updated to reflect Human and Mouse nomenclature	70877	APPROVED

RGD Curation Notes

Note Type	Note	Reference

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)