Pecr (peroxisomal trans-2-enoyl-CoA reductase) - Rat Genome Database

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Gene: Pecr (peroxisomal trans-2-enoyl-CoA reductase) Rattus norvegicus
Analyze
Symbol: Pecr
Name: peroxisomal trans-2-enoyl-CoA reductase
RGD ID: 70925
Description: Predicted to enable signaling receptor binding activity and trans-2-enoyl-CoA reductase (NADPH) activity. Predicted to be involved in phytol metabolic process. Located in peroxisome. Orthologous to human PECR (peroxisomal trans-2-enoyl-CoA reductase); PARTICIPATES IN unsaturated fatty acid biosynthetic pathway; INTERACTS WITH (+)-schisandrin B; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: perosisomal 2-enoyl-CoA reductase; peroxisomal 2,4-dienoyl-CoA reductase; PX-2,4-DCR1; RLF98; TERP
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8981,347,170 - 81,375,809 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl981,347,173 - 81,375,806 (-)EnsemblGRCr8
mRatBN7.2973,897,877 - 73,926,511 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl973,897,880 - 73,926,511 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx982,362,052 - 82,390,622 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0987,490,925 - 87,519,494 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0985,878,580 - 85,907,053 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0979,601,937 - 79,630,547 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl979,601,901 - 79,630,536 (-)Ensemblrn6Rnor6.0
Rnor_5.0979,375,015 - 79,403,569 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4971,414,826 - 71,443,719 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera971,295,475 - 71,324,134 (-)NCBICelera
RGSC_v3.1971,561,810 - 71,590,701 (-)NCBI
Cytogenetic Map9q33NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dexrazoxane  (ISO)
(+)-schisandrin B  (EXP)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acetamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (EXP)
amitriptyline  (EXP)
ammonium chloride  (EXP)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bicalutamide  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
cisplatin  (EXP,ISO)
clomipramine  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
decanoyl-CoA  (ISO)
dibutyl phthalate  (EXP,ISO)
dicrotophos  (ISO)
dimethyl sulfoxide  (ISO)
ethanol  (EXP)
flutamide  (EXP)
folic acid  (ISO)
GW 4064  (ISO)
GW 7647  (ISO)
hexanoyl-CoA  (ISO)
imipramine  (EXP)
indometacin  (EXP)
isoprenaline  (EXP)
isotretinoin  (ISO)
ivermectin  (ISO)
ketoconazole  (EXP)
lauroyl-CoA  (ISO)
lipopolysaccharide  (ISO)
melatonin  (EXP,ISO)
methapyrilene  (EXP,ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
monosodium L-glutamate  (ISO)
N-nitrosodiethylamine  (ISO)
NADP zwitterion  (ISO)
NADP(+)  (ISO)
nefazodone  (EXP)
nickel atom  (ISO)
nimesulide  (EXP)
nitrofen  (EXP)
O-methyleugenol  (ISO)
ochratoxin A  (ISO)
okadaic acid  (ISO)
oleic acid  (ISO)
paracetamol  (ISO)
perfluorooctanoic acid  (ISO)
phlorizin  (ISO)
pirinixic acid  (ISO)
Propiverine  (EXP)
quercetin  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
sodium arsenite  (EXP,ISO)
Soman  (EXP)
tamoxifen  (ISO)
tauroursodeoxycholic acid  (EXP)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
tetracycline  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
mitochondrion  (ISO,ISS)
peroxisomal membrane  (ISS)
peroxisome  (IBA,IDA,IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Molecular cloning and expression of mammalian peroxisomal trans-2-enoyl-coenzyme A reductase cDNAs. Das AK, etal., J Biol Chem. 2000 Aug 11;275(32):24333-40.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease. Kikuchi M, etal., J Biol Chem. 2004 Jan 2;279(1):421-8. Epub 2003 Oct 15.
4. Gene Data Set MGD Curation, June 12, 2002
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. Characterisation of several Hsp70 interacting proteins from mammalian organelles. Naylor DJ, etal., Biochim Biophys Acta 1999 May 18;1431(2):443-50.
7. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
8. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
9. GOA pipeline RGD automated data pipeline
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
12. Molecular cloning and characterization of a new fasting-inducible short-chain dehydrogenase/reductase from rat liver(1). Zhang J and Underwood LE, Biochim Biophys Acta 1999 Nov 16;1435(1-2):184-90.
Additional References at PubMed
PMID:11669066   PMID:14651853   PMID:15489334   PMID:16546181   PMID:20178365   PMID:23486364  


Genomics

Comparative Map Data
Pecr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8981,347,170 - 81,375,809 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl981,347,173 - 81,375,806 (-)EnsemblGRCr8
mRatBN7.2973,897,877 - 73,926,511 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl973,897,880 - 73,926,511 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx982,362,052 - 82,390,622 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0987,490,925 - 87,519,494 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0985,878,580 - 85,907,053 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0979,601,937 - 79,630,547 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl979,601,901 - 79,630,536 (-)Ensemblrn6Rnor6.0
Rnor_5.0979,375,015 - 79,403,569 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4971,414,826 - 71,443,719 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera971,295,475 - 71,324,134 (-)NCBICelera
RGSC_v3.1971,561,810 - 71,590,701 (-)NCBI
Cytogenetic Map9q33NCBI
PECR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382216,029,088 - 216,081,809 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2215,996,329 - 216,082,955 (-)Ensemblhg38GRCh38
GRCh372216,903,111 - 216,946,532 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362216,611,377 - 216,654,777 (-)NCBIBuild 36Build 36hg18NCBI36
Celera2210,672,701 - 210,716,120 (-)NCBICelera
Cytogenetic Map2q35NCBI
HuRef2208,760,236 - 208,803,811 (-)NCBIHuRef
CHM1_12216,909,140 - 216,952,518 (-)NCBICHM1_1
T2T-CHM13v2.02216,514,519 - 216,567,213 (-)NCBIT2T-CHM13v2.0
Pecr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39172,298,331 - 72,323,480 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl172,298,326 - 72,323,473 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38172,259,172 - 72,284,321 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl172,259,167 - 72,284,314 (-)Ensemblmm10GRCm38
MGSCv37172,305,746 - 72,330,888 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36172,192,385 - 72,217,512 (-)NCBIMGSCv36mm8
Celera172,824,534 - 72,852,670 (-)NCBICelera
Cytogenetic Map1C3NCBI
cM Map136.46NCBI
Pecr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545317,076,115 - 17,108,957 (+)Ensembl
ChiLan1.0NW_00495545317,059,779 - 17,109,531 (+)NCBIChiLan1.0ChiLan1.0
PECR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213118,667,984 - 118,711,359 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B118,682,948 - 118,726,353 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B103,300,621 - 103,344,638 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B221,902,404 - 221,945,131 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B221,902,404 - 221,945,134 (-)EnsemblpanPan2panpan1.1
PECR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13723,038,285 - 23,067,357 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3723,038,285 - 23,067,357 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3723,864,161 - 23,893,197 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03723,061,473 - 23,090,534 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3723,060,609 - 23,090,531 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13722,948,904 - 22,977,963 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03722,900,756 - 22,929,927 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03722,918,369 - 22,947,422 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pecr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303171,439,232 - 171,461,618 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365861,164,224 - 1,187,141 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365861,164,256 - 1,186,960 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PECR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15118,295,119 - 118,335,835 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.115118,296,359 - 118,335,886 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215131,178,904 - 131,216,801 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PECR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110101,884,553 - 101,925,367 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10101,884,436 - 101,925,346 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604097,472,543 - 97,513,780 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pecr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248239,017,410 - 9,066,734 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248239,017,336 - 9,067,196 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Pecr
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v14145,836,735 - 145,871,157 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Pecr
211 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)9671488884474983Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)956047863101047863Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)94002992585029925Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)963376862108376862Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)94445825699506504Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)965657365108376720Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)94445825685262605Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92956766483835942Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)94172029586720295Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)964220169109220169Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)944458256121768150Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)964220169109220169Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)964220169109220169Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)93922018684220186Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)968875497121768150Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)948718864108376862Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)94002992585029925Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)95450650499506504Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)964220169109220169Rat

Markers in Region
D9Got216  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2973,927,527 - 73,927,719 (+)MAPPERmRatBN7.2
Rnor_6.0979,631,564 - 79,631,753NCBIRnor6.0
Rnor_5.0979,404,586 - 79,404,775UniSTSRnor5.0
RGSC_v3.4971,444,736 - 71,444,925UniSTSRGSC3.4
Celera971,325,151 - 71,325,340UniSTS
Cytogenetic Map9q33UniSTS
RH144097  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2973,916,373 - 73,916,572 (+)MAPPERmRatBN7.2
Rnor_6.0979,620,412 - 79,620,610NCBIRnor6.0
Rnor_5.0979,393,434 - 79,393,632UniSTSRnor5.0
RGSC_v3.4971,433,584 - 71,433,782UniSTSRGSC3.4
Celera971,314,034 - 71,314,232UniSTS
RH 3.4 Map9673.9UniSTS
Cytogenetic Map9q33UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000078125   ⟹   ENSRNOP00000069475
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl981,353,980 - 81,375,806 (-)Ensembl
mRatBN7.2 Ensembl973,904,685 - 73,926,501 (-)Ensembl
Rnor_6.0 Ensembl979,602,105 - 79,630,452 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000086044   ⟹   ENSRNOP00000069075
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl981,354,534 - 81,375,806 (-)Ensembl
mRatBN7.2 Ensembl973,905,239 - 73,926,501 (-)Ensembl
Rnor_6.0 Ensembl979,604,671 - 79,630,467 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000089283   ⟹   ENSRNOP00000073815
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl981,347,173 - 81,375,806 (-)Ensembl
mRatBN7.2 Ensembl973,897,880 - 73,926,511 (-)Ensembl
Rnor_6.0 Ensembl979,601,901 - 79,630,536 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000103464   ⟹   ENSRNOP00000097859
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl973,900,389 - 73,926,503 (-)Ensembl
RefSeq Acc Id: NM_133299   ⟹   NP_579833
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8981,347,170 - 81,375,806 (-)NCBI
mRatBN7.2973,897,877 - 73,926,511 (-)NCBI
Rnor_6.0979,601,937 - 79,630,547 (-)NCBI
Rnor_5.0979,375,015 - 79,403,569 (-)NCBI
RGSC_v3.4971,414,826 - 71,443,719 (-)RGD
Celera971,295,475 - 71,324,134 (-)RGD
Sequence:
RefSeq Acc Id: XM_063266531   ⟹   XP_063122601
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8981,351,192 - 81,375,809 (-)NCBI
RefSeq Acc Id: NP_579833   ⟸   NM_133299
- UniProtKB: Q9WVK3 (UniProtKB/Swiss-Prot),   A6KFH7 (UniProtKB/TrEMBL),   A0A8I6ATH4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000073815   ⟸   ENSRNOT00000089283
Ensembl Acc Id: ENSRNOP00000069475   ⟸   ENSRNOT00000078125
Ensembl Acc Id: ENSRNOP00000069075   ⟸   ENSRNOT00000086044
Ensembl Acc Id: ENSRNOP00000097859   ⟸   ENSRNOT00000103464
RefSeq Acc Id: XP_063122601   ⟸   XM_063266531
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JUF1 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WVK3-F1-model_v2 AlphaFold Q9WVK3 1-303 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696743
Promoter ID:EPDNEW_R7260
Type:initiation region
Name:Pecr_1
Description:peroxisomal trans-2-enoyl-CoA reductase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0979,630,531 - 79,630,591EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:70925 AgrOrtholog
BioCyc Gene G2FUF-27208 BioCyc
BioCyc Pathway PWY66-389 [phytol degradation] BioCyc
BioCyc Pathway Image PWY66-389 BioCyc
Ensembl Genes ENSRNOG00000055295 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000086044 ENTREZGENE
  ENSRNOT00000089283 ENTREZGENE
  ENSRNOT00000089283.2 UniProtKB/Swiss-Prot
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:6889831 IMAGE-MGC_LOAD
InterPro NAD(P)-bd_dom_sf UniProtKB/Swiss-Prot
  Peroxisomal_t2-enoyl-CoA_red UniProtKB/Swiss-Prot
  SDR_fam UniProtKB/Swiss-Prot
KEGG Report rno:113956 UniProtKB/Swiss-Prot
MGC_CLONE MGC:72708 IMAGE-MGC_LOAD
NCBI Gene 113956 ENTREZGENE
PANTHER PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE UniProtKB/Swiss-Prot
  PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE UniProtKB/Swiss-Prot
Pfam adh_short_C2 UniProtKB/Swiss-Prot
PhenoGen Pecr PhenoGen
PRINTS GDHRDH UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000055295 RatGTEx
Superfamily-SCOP SSF51735 UniProtKB/Swiss-Prot
UniProt A0A0G2JUF1 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2JVG4_RAT UniProtKB/TrEMBL
  A0A0G2K6H4_RAT UniProtKB/TrEMBL
  A0A8I6ATH4 ENTREZGENE
  A6KFH7 ENTREZGENE, UniProtKB/TrEMBL
  A6KFH8_RAT UniProtKB/TrEMBL
  A6KFH9_RAT UniProtKB/TrEMBL
  A6KFI0_RAT UniProtKB/TrEMBL
  PECR_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Pecr  peroxisomal trans-2-enoyl-CoA reductase    perosisomal 2-enoyl-CoA reductase  Name updated 1299863 APPROVED
2002-07-09 Pecr  perosisomal 2-enoyl-CoA reductase      Symbol and Name updated to reflect Human and Mouse nomenclature 70877 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_expression expression is induced by fasting 70626