Cep104 (centrosomal protein 104) - Rat Genome Database

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Gene: Cep104 (centrosomal protein 104) Rattus norvegicus
Analyze
Symbol: Cep104
Name: centrosomal protein 104
RGD ID: 708505
Description: Enables glutamate binding activity; glycine binding activity; and thienylcyclohexylpiperidine binding activity. Predicted to be located in centriole. Predicted to be active in cilium. Human ortholog(s) of this gene implicated in Joubert syndrome 25 and autosomal recessive intellectual developmental disorder 77. Orthologous to human CEP104 (centrosomal protein 104); INTERACTS WITH bisphenol A; glyphosate; methamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: centrosomal protein of 104 kDa; GlyBP; glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein; LOC246295
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85169,817,383 - 169,849,681 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl5169,817,182 - 169,852,695 (+)EnsemblGRCr8
mRatBN7.25164,534,773 - 164,567,260 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5164,534,782 - 164,567,248 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx5167,239,067 - 167,271,356 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05169,060,477 - 169,092,766 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05169,022,925 - 169,055,214 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.05171,262,278 - 171,294,560 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5171,262,278 - 171,294,559 (+)Ensemblrn6Rnor6.0
Rnor_5.05174,753,900 - 174,786,095 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.45170,762,437 - 170,793,899 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera5162,746,921 - 162,779,233 (+)NCBICelera
RGSC_v3.15170,785,668 - 170,805,838 (+)NCBI
Cytogenetic Map5q36NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centriole  (IEA,ISO)
centrosome  (IEA)
cilium  (IBA,IEA,ISO)
spindle pole  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Cloning of the cDNA for a brain glycine-, glutamate- and thienylcyclohexylpiperidine-binding protein. Kumar KN, etal., Biochem Biophys Res Commun 1995 Nov 2;216(1):390-8.
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:8939461   PMID:21399614  


Genomics

Comparative Map Data
Cep104
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85169,817,383 - 169,849,681 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl5169,817,182 - 169,852,695 (+)EnsemblGRCr8
mRatBN7.25164,534,773 - 164,567,260 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5164,534,782 - 164,567,248 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx5167,239,067 - 167,271,356 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05169,060,477 - 169,092,766 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05169,022,925 - 169,055,214 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.05171,262,278 - 171,294,560 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5171,262,278 - 171,294,559 (+)Ensemblrn6Rnor6.0
Rnor_5.05174,753,900 - 174,786,095 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.45170,762,437 - 170,793,899 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera5162,746,921 - 162,779,233 (+)NCBICelera
RGSC_v3.15170,785,668 - 170,805,838 (+)NCBI
Cytogenetic Map5q36NCBI
CEP104
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813,812,086 - 3,857,211 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl13,812,086 - 3,857,723 (-)Ensemblhg38GRCh38
GRCh3713,728,650 - 3,773,775 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3613,721,204 - 3,763,657 (-)NCBIBuild 36Build 36hg18NCBI36
Celera12,982,705 - 3,023,114 (-)NCBICelera
Cytogenetic Map1p36.32NCBI
HuRef13,024,327 - 3,069,355 (-)NCBIHuRef
CHM1_113,715,664 - 3,760,800 (-)NCBICHM1_1
T2T-CHM13v2.013,323,682 - 3,368,809 (-)NCBIT2T-CHM13v2.0
Cep104
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394154,059,649 - 154,093,189 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4154,059,651 - 154,093,189 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm384153,975,126 - 154,008,732 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4153,975,194 - 154,008,732 (+)Ensemblmm10GRCm38
MGSCv374153,349,670 - 153,381,334 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv364152,819,361 - 152,851,025 (+)NCBIMGSCv36mm8
Celera4156,263,741 - 156,294,655 (+)NCBICelera
Cytogenetic Map4E2NCBI
cM Map483.78NCBI
Cep104
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554867,853,641 - 7,876,047 (+)Ensembl
ChiLan1.0NW_0049554867,849,921 - 7,877,598 (+)NCBIChiLan1.0ChiLan1.0
CEP104
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21224,450,603 - 224,493,855 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11223,094,319 - 223,137,899 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012,485,711 - 2,529,745 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.113,607,940 - 3,649,450 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl13,606,659 - 3,648,832 (-)EnsemblpanPan2panpan1.1
CEP104
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1558,301,767 - 58,339,920 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl558,305,589 - 58,335,438 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha558,312,060 - 58,350,211 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0558,509,183 - 58,547,344 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl558,511,699 - 58,547,609 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1558,516,904 - 58,555,051 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0558,385,797 - 58,423,948 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0558,776,065 - 58,814,220 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Cep104
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505829,338,027 - 29,369,250 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493673798,365 - 129,671 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493673798,346 - 127,932 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP104
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl665,274,488 - 65,310,669 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1665,274,092 - 65,310,735 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2660,132,912 - 60,157,253 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CEP104
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120127,823,789 - 127,866,172 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20127,828,995 - 127,865,544 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605432,025,707 - 32,077,919 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cep104
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248186,716,695 - 6,737,883 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248186,712,616 - 6,737,377 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Cep104
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v116,709,622 - 6,742,628 (-)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:255
Count of miRNA genes:164
Interacting mature miRNAs:215
Transcripts:ENSRNOT00000031138
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555124766172190305Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5130249266172190305Rat
1354583Despr3Despair related QTL34.980.0002locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)5132930505172190305Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5141212838172190305Rat
1300119Bp180Blood pressure QTL 1803.82arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5149642129171146538Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5131708216172190305Rat
1549904Neuinf1Neuroinflammation QTL 130nervous system integrity trait (VT:0010566)blood T lymphocyte count (CMO:0000110)5160111176171146538Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)599905133172190305Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5133789363172190305Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5134369199172190305Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5136631198172190305Rat
1354631Swd2Spike wave discharge measurement QTL 23.640.0002brain electrophysiology trait (VT:0010557)brain total spike-and-wave discharge duration (CMO:0001740)5156396728172190305Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5133081618172190305Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5138002522170842766Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5133270647172190305Rat
1298090Bp155Blood pressure QTL 1553.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)5156289283171137955Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5160071170172129029Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)5141764300172190305Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5133081618172190305Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5133789363172190305Rat
1331721Bp210Blood pressure QTL 2103.413arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5148093485172129029Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5125969677172190305Rat

Markers in Region
RH133619  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25164,566,782 - 164,566,988 (+)MAPPERmRatBN7.2
Rnor_6.05171,294,094 - 171,294,299NCBIRnor6.0
Rnor_5.05174,785,629 - 174,785,834UniSTSRnor5.0
RGSC_v3.45170,794,882 - 170,795,087UniSTSRGSC3.4
Celera5162,778,767 - 162,778,972UniSTS
RH 3.4 Map51138.3UniSTS
Cytogenetic Map5q36UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 92 59 6 356 192 11 142 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_145082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039109276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039109277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039109278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039109279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA924538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI289406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB544954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB792008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK843167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO390283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV797293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV722335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM108776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U53513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000031138   ⟹   ENSRNOP00000034972
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5169,817,182 - 169,849,702 (+)Ensembl
mRatBN7.2 Ensembl5164,534,956 - 164,567,248 (+)Ensembl
Rnor_6.0 Ensembl5171,262,278 - 171,294,559 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000077307   ⟹   ENSRNOP00000069101
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5169,817,185 - 169,849,683 (+)Ensembl
mRatBN7.2 Ensembl5164,534,782 - 164,567,244 (+)Ensembl
Rnor_6.0 Ensembl5171,274,544 - 171,294,555 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108344   ⟹   ENSRNOP00000077236
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5169,817,182 - 169,852,695 (+)Ensembl
mRatBN7.2 Ensembl5164,539,835 - 164,567,248 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000109206   ⟹   ENSRNOP00000077901
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5169,817,190 - 169,849,672 (+)Ensembl
mRatBN7.2 Ensembl5164,534,956 - 164,567,248 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000111354   ⟹   ENSRNOP00000076639
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5169,817,182 - 169,849,702 (+)Ensembl
mRatBN7.2 Ensembl5164,534,956 - 164,567,248 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000156058   ⟹   ENSRNOP00000106727
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5169,817,182 - 169,845,694 (+)Ensembl
RefSeq Acc Id: NM_145082   ⟹   NP_659550
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85169,817,383 - 169,849,673 (+)NCBI
mRatBN7.25164,534,956 - 164,567,249 (+)NCBI
Rnor_6.05171,262,278 - 171,294,560 (+)NCBI
Rnor_5.05174,753,900 - 174,786,095 (+)NCBI
Celera5162,746,921 - 162,779,233 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039109276   ⟹   XP_038965204
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85169,817,454 - 169,849,681 (+)NCBI
mRatBN7.25164,534,773 - 164,567,260 (+)NCBI
RefSeq Acc Id: XM_039109277   ⟹   XP_038965205
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85169,817,450 - 169,849,681 (+)NCBI
mRatBN7.25164,535,024 - 164,567,260 (+)NCBI
RefSeq Acc Id: XM_039109278   ⟹   XP_038965206
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85169,817,450 - 169,849,681 (+)NCBI
mRatBN7.25164,535,024 - 164,567,260 (+)NCBI
RefSeq Acc Id: XM_039109279   ⟹   XP_038965207
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85169,817,460 - 169,849,681 (+)NCBI
mRatBN7.25164,534,773 - 164,567,260 (+)NCBI
RefSeq Acc Id: NP_659550   ⟸   NM_145082
- UniProtKB: Q62965 (UniProtKB/Swiss-Prot),   A0A0G2JUH6 (UniProtKB/Swiss-Prot),   D3Z8X7 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000034972   ⟸   ENSRNOT00000031138
Ensembl Acc Id: ENSRNOP00000069101   ⟸   ENSRNOT00000077307
RefSeq Acc Id: XP_038965204   ⟸   XM_039109276
- Peptide Label: isoform X1
- UniProtKB: Q62965 (UniProtKB/Swiss-Prot),   D3Z8X7 (UniProtKB/Swiss-Prot),   A0A0G2JUH6 (UniProtKB/Swiss-Prot),   A0A8L2QJT0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038965207   ⟸   XM_039109279
- Peptide Label: isoform X4
- UniProtKB: A0A8I5Y1C2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038965205   ⟸   XM_039109277
- Peptide Label: isoform X2
- UniProtKB: Q62965 (UniProtKB/Swiss-Prot),   D3Z8X7 (UniProtKB/Swiss-Prot),   A0A0G2JUH6 (UniProtKB/Swiss-Prot),   A0A1P0QEF5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038965206   ⟸   XM_039109278
- Peptide Label: isoform X3
- UniProtKB: Q62965 (UniProtKB/Swiss-Prot),   D3Z8X7 (UniProtKB/Swiss-Prot),   A0A0G2JUH6 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSRNOP00000077901   ⟸   ENSRNOT00000109206
Ensembl Acc Id: ENSRNOP00000077236   ⟸   ENSRNOT00000108344
Ensembl Acc Id: ENSRNOP00000076639   ⟸   ENSRNOT00000111354
Ensembl Acc Id: ENSRNOP00000106727   ⟸   ENSRNOT00000156058
Protein Domains
TOG

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3Z8X7-F1-model_v2 AlphaFold D3Z8X7 1-922 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:708505 AgrOrtholog
BioCyc Gene G2FUF-38974 BioCyc
Ensembl Genes ENSRNOG00000025000 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000031138 ENTREZGENE
  ENSRNOT00000077307 ENTREZGENE
  ENSRNOT00000108344 ENTREZGENE
  ENSRNOT00000109206 ENTREZGENE
Gene3D-CATH 1.25.10.10 UniProtKB/Swiss-Prot
  3.30.40.10 UniProtKB/Swiss-Prot
InterPro ARM-like UniProtKB/Swiss-Prot
  ARM-type_fold UniProtKB/Swiss-Prot
  CEP104-like UniProtKB/Swiss-Prot
  CEP104_N UniProtKB/Swiss-Prot
  CEP104_Znf UniProtKB/Swiss-Prot
  Galactose-bd-like_sf UniProtKB/Swiss-Prot
  TOG UniProtKB/Swiss-Prot
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot
KEGG Report rno:246295 UniProtKB/Swiss-Prot
NCBI Gene 246295 ENTREZGENE
PANTHER CENTROSOMAL PROTEIN OF 104 KDA UniProtKB/Swiss-Prot
  GLYCINE-, GLUTAMATE-, THIENYLCYCLOHEXYLPIPERIDINE-BINDING PROTEIN UniProtKB/Swiss-Prot
Pfam CEP104-like_TOG UniProtKB/Swiss-Prot
  CEP104_N UniProtKB/Swiss-Prot
  CEP104_ZnF UniProtKB/Swiss-Prot
PhenoGen Cep104 PhenoGen
RatGTEx ENSRNOG00000025000 RatGTEx
SMART TOG UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot
  SSF49785 UniProtKB/Swiss-Prot
UniProt A0A0G2JUH6 ENTREZGENE
  A0A1P0QEF5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y089_RAT UniProtKB/TrEMBL
  A0A8I5Y1C2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y1Q4_RAT UniProtKB/TrEMBL
  A0A8L2QJT0 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L8Y4_RAT UniProtKB/TrEMBL
  CE104_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q62965 ENTREZGENE
UniProt Secondary A0A0G2JUH6 UniProtKB/Swiss-Prot
  Q62965 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-09-17 Cep104  centrosomal protein 104  LOC246295  glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-09-30 LOC246295        Symbol and Name status set to provisional 70820 PROVISIONAL