Trpc7 (transient receptor potential cation channel, subfamily C, member 7) - Rat Genome Database

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Gene: Trpc7 (transient receptor potential cation channel, subfamily C, member 7) Rattus norvegicus
Analyze
Symbol: Trpc7
Name: transient receptor potential cation channel, subfamily C, member 7
RGD ID: 628820
Description: Predicted to enable inositol 1,4,5 trisphosphate binding activity and store-operated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport; regulation of cytosolic calcium ion concentration; and single fertilization. Predicted to act upstream of or within calcium ion transport and manganese ion transport. Located in perinuclear region of cytoplasm. Human ortholog(s) of this gene implicated in lung cancer. Orthologous to human TRPC7 (transient receptor potential cation channel subfamily C member 7); INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: capacitative calcium channel TRPC7; short transient receptor potential channel 7
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8177,707,954 - 7,839,064 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl177,714,505 - 7,838,745 (+)EnsemblGRCr8
mRatBN7.2177,708,911 - 7,833,435 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl177,709,583 - 7,833,435 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx177,728,782 - 7,851,532 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0179,261,227 - 9,383,024 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0177,725,168 - 7,847,919 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0178,134,267 - 8,280,360 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,135,251 - 8,279,515 (+)Ensemblrn6Rnor6.0
Rnor_5.01710,316,554 - 10,456,609 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41713,660,133 - 13,781,358 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera177,806,368 - 7,928,485 (+)NCBICelera
RGSC_v3.11713,749,821 - 13,771,093 (+)NCBI
Cytogenetic Map17p14NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View
lung cancer  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Increasing the expression of calcium-permeable TRPC3 and TRPC7 channels enhances constitutive secretion. Lavender V, etal., Biochem J. 2008 Aug 1;413(3):437-46. doi: 10.1042/BJ20071488.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Co-expression of non-selective cation channels of the transient receptor potential canonical family in central aminergic neurones. Sergeeva OA, etal., J Neurochem 2003 Jun;85(6):1547-52.
7. Identification of TRPCs genetic variants that modify risk for lung cancer based on the pathway and two-stage study. Zhang Z, etal., Meta Gene. 2016 Jul 8;9:191-6. doi: 10.1016/j.mgene.2016.07.005. eCollection 2016 Sep.
Additional References at PubMed
PMID:10488066   PMID:14627551   PMID:15199065   PMID:18502908  


Genomics

Comparative Map Data
Trpc7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8177,707,954 - 7,839,064 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl177,714,505 - 7,838,745 (+)EnsemblGRCr8
mRatBN7.2177,708,911 - 7,833,435 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl177,709,583 - 7,833,435 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx177,728,782 - 7,851,532 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0179,261,227 - 9,383,024 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0177,725,168 - 7,847,919 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0178,134,267 - 8,280,360 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,135,251 - 8,279,515 (+)Ensemblrn6Rnor6.0
Rnor_5.01710,316,554 - 10,456,609 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41713,660,133 - 13,781,358 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera177,806,368 - 7,928,485 (+)NCBICelera
RGSC_v3.11713,749,821 - 13,771,093 (+)NCBI
Cytogenetic Map17p14NCBI
TRPC7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385136,212,745 - 136,365,545 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5136,212,745 - 136,365,545 (-)Ensemblhg38GRCh38
GRCh375135,548,433 - 135,701,233 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365135,577,022 - 135,720,974 (-)NCBIBuild 36Build 36hg18NCBI36
Build 345135,577,021 - 135,720,972NCBI
Celera5131,673,736 - 131,825,919 (-)NCBICelera
Cytogenetic Map5q31.1NCBI
HuRef5130,737,474 - 130,889,316 (-)NCBIHuRef
CHM1_15134,981,614 - 135,133,762 (-)NCBICHM1_1
T2T-CHM13v2.05136,735,275 - 136,888,049 (-)NCBIT2T-CHM13v2.0
Trpc7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391356,920,911 - 57,043,778 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1356,920,926 - 57,043,806 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381356,773,098 - 56,895,968 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1356,773,113 - 56,895,993 (-)Ensemblmm10GRCm38
MGSCv371356,874,469 - 56,996,949 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361356,782,730 - 56,905,210 (-)NCBIMGSCv36mm8
Celera1357,827,818 - 57,952,905 (-)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1330.27NCBI
Trpc7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540831,261,421 - 31,416,108 (-)Ensembl
ChiLan1.0NW_00495540831,260,767 - 31,408,852 (-)NCBIChiLan1.0ChiLan1.0
TRPC7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24131,499,891 - 131,652,824 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15129,639,451 - 129,792,384 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05131,604,175 - 131,756,944 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15137,743,638 - 137,896,107 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5137,743,638 - 137,896,107 (-)EnsemblpanPan2panpan1.1
TRPC7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11124,113,128 - 24,256,998 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1124,113,932 - 24,252,989 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1122,859,569 - 23,003,547 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01124,928,881 - 25,072,881 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1124,929,609 - 25,069,230 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11123,647,009 - 23,790,666 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01123,483,142 - 23,627,149 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01124,131,869 - 24,275,920 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Trpc7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213124,274,159 - 124,418,976 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365973,298,984 - 3,443,796 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365973,298,968 - 3,470,863 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TRPC7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2138,373,189 - 138,510,728 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.12138,373,972 - 138,502,280 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22143,969,145 - 144,151,823 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TRPC7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12338,957,128 - 39,098,615 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603438,814,605 - 38,955,676 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Trpc7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473310,703,428 - 10,900,054 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473310,703,295 - 10,900,206 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Trpc7
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11481,185,362 - 81,307,840 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Trpc7
1013 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:145
Count of miRNA genes:107
Interacting mature miRNAs:118
Transcripts:ENSRNOT00000016982
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17136045694Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17143999106Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17436005727233623Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17121499218Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17212084342054133Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17473353449733534Rat
2302377Scl61Serum cholesterol level QTL 614.36blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)17622199858177198Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17138037084Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131706603Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17473353449733534Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17143999106Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17436005727233623Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17143999106Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17212084322087569Rat
1549900Iddm20Insulin dependent diabetes mellitus QTL 203.7pancreas integrity trait (VT:0010560)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)17122181410Rat
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122877318Rat

Markers in Region
BB254000  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2177,833,406 - 7,833,551 (+)MAPPERmRatBN7.2
Rnor_6.0178,279,487 - 8,279,631NCBIRnor6.0
Rnor_5.01710,456,343 - 10,456,487UniSTSRnor5.0
RGSC_v3.41713,781,330 - 13,781,474UniSTSRGSC3.4
Celera177,928,457 - 7,928,601UniSTS
Cytogenetic Map17p14UniSTS
RH129314  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8177,750,280 - 7,750,439 (+)Marker Load Pipeline
mRatBN7.2177,744,962 - 7,745,121 (+)MAPPERmRatBN7.2
Rnor_6.0178,176,781 - 8,176,939NCBIRnor6.0
Rnor_5.01710,356,916 - 10,357,074UniSTSRnor5.0
RGSC_v3.41713,691,448 - 13,691,606UniSTSRGSC3.4
Celera177,839,951 - 7,840,107UniSTS
Cytogenetic Map17p14UniSTS
RH140173  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2177,809,038 - 7,809,251 (+)MAPPERmRatBN7.2
Rnor_6.0178,241,562 - 8,241,774NCBIRnor6.0
Rnor_5.01710,420,770 - 10,420,982UniSTSRnor5.0
RGSC_v3.41713,757,590 - 13,757,802UniSTSRGSC3.4
Celera177,904,306 - 7,904,518UniSTS
RH 3.4 Map1765.4UniSTS
Cytogenetic Map17p14UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
10 9 24 131 43 42 13 26 13 5 141 76 8 106 34 55 29 16 16

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001191691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAHX01089877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AAHX01089878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AAHX01089879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AAHX01089880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AAHX01089881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AAHX01089882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY157999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY390391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000016982   ⟹   ENSRNOP00000016982
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl177,714,505 - 7,838,745 (+)Ensembl
mRatBN7.2 Ensembl177,709,583 - 7,833,435 (+)Ensembl
Rnor_6.0 Ensembl178,135,251 - 8,279,515 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000105978   ⟹   ENSRNOP00000095667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl177,716,507 - 7,833,435 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000106426   ⟹   ENSRNOP00000089818
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl177,714,505 - 7,838,745 (+)Ensembl
mRatBN7.2 Ensembl177,709,583 - 7,833,435 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000120293   ⟹   ENSRNOP00000089856
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl177,714,901 - 7,838,745 (+)Ensembl
mRatBN7.2 Ensembl177,709,583 - 7,833,435 (+)Ensembl
RefSeq Acc Id: NM_001191691   ⟹   NP_001178620
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8177,714,901 - 7,838,745 (+)NCBI
mRatBN7.2177,709,583 - 7,833,435 (+)NCBI
Rnor_6.0178,135,251 - 8,279,515 (+)NCBI
Rnor_5.01710,316,554 - 10,456,609 (+)NCBI
Celera177,806,368 - 7,928,485 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600463   ⟹   XP_017455952
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8177,707,954 - 7,839,064 (+)NCBI
mRatBN7.2177,708,911 - 7,833,435 (+)NCBI
Rnor_6.0178,134,267 - 8,279,515 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001178620   ⟸   NM_001191691
- UniProtKB: F1LQF7 (UniProtKB/TrEMBL),   A6KAM1 (UniProtKB/TrEMBL),   A0A8I6GIE6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455952   ⟸   XM_017600463
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GIE6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000016982   ⟸   ENSRNOT00000016982
Ensembl Acc Id: ENSRNOP00000095667   ⟸   ENSRNOT00000105978
Ensembl Acc Id: ENSRNOP00000089856   ⟸   ENSRNOT00000120293
Ensembl Acc Id: ENSRNOP00000089818   ⟸   ENSRNOT00000106426
Protein Domains
Transient receptor ion channel

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LQF7-F1-model_v2 AlphaFold F1LQF7 1-862 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700284
Promoter ID:EPDNEW_R10808
Type:single initiation site
Name:Trpc7_1
Description:transient receptor potential cation channel, subfamily C, member7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0178,135,218 - 8,135,278EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:628820 AgrOrtholog
BioCyc Gene G2FUF-10289 BioCyc
Ensembl Genes ENSRNOG00000012727 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000016982 ENTREZGENE
  ENSRNOT00000016982.6 UniProtKB/TrEMBL
  ENSRNOT00000106426 ENTREZGENE
  ENSRNOT00000106426.2 UniProtKB/TrEMBL
  ENSRNOT00000120293.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  Ion_trans_dom UniProtKB/TrEMBL
  TRP_dom UniProtKB/TrEMBL
  TRPC7_channel UniProtKB/TrEMBL
  TRPC_channel UniProtKB/TrEMBL
KEGG Report rno:282822 UniProtKB/TrEMBL
NCBI Gene 282822 ENTREZGENE
PANTHER PTHR10117 UniProtKB/TrEMBL
  PTHR10117:SF9 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  Ion_trans UniProtKB/TrEMBL
  TRP_2 UniProtKB/TrEMBL
PhenoGen Trpc7 PhenoGen
PRINTS TRNSRECEPTRP UniProtKB/TrEMBL
  TRPCHANNEL7 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012727 RatGTEx
SMART ANK UniProtKB/TrEMBL
  TRP_2 UniProtKB/TrEMBL
Superfamily-SCOP ANK UniProtKB/TrEMBL
UniProt A0A8I6GIE6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GIF7_RAT UniProtKB/TrEMBL
  A6KAM1 ENTREZGENE, UniProtKB/TrEMBL
  A7L635_RAT UniProtKB/TrEMBL
  F1LQF7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Trpc7  transient receptor potential cation channel, subfamily C, member 7      Symbol and Name status set to approved 1299863 APPROVED
2003-02-27 Trpc7  transient receptor potential cation channel, subfamily C, member 7      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_protein homomeric in aminergic neurones 724764
gene_regulation channel activity (Ca2+ influx) induced by agonists to histamine H1 receptors, 1-adrenoreceptors, muscarinic acetylcholine receptors, and P2Y receptors 724764