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Gene: Rasd2 (RASD family, member 2) Rattus norvegicus

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Symbol:

Rasd2

Name:

RASD family, member 2

RGD ID:

628594

Description:

Enables GTP binding activity; phosphatidylinositol 3-kinase binding activity; and ubiquitin conjugating enzyme binding activity. Involved in negative regulation of protein ubiquitination; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; and positive regulation of protein sumoylation. Located in plasma membrane. Orthologous to human RASD2 (RASD family member 2); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

GTP-binding protein Rhes; ras homolog enriched in striatum; Rhes; SE6C

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RASD2 (RASD family member 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Rasd2 (RASD family, member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rasd2 (RASD family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RASD2 (RASD family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RASD2 (RASD family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rasd2 (RASD family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RASD2 (RASD family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RASD2 (RASD family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rasd2 (RASD family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Rasd2 (RASD family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RASD1 (ras related dexamethasone induced 1)	HGNC	OrthoDB
Alliance orthologs ³
Mus musculus (house mouse):	Rasd2 (RASD family, member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rasd2 (RASD family, member 2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	RASD2 (RASD family member 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rasd1 (RAS, dexamethasone-induced 1)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	ssr-2	Alliance	DIOPT (Ensembl Compara\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8641	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8641	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rasd2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	13,600,028 - 13,610,753 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	19	13,599,986 - 13,610,753 (+)	Ensembl				GRCr8
mRatBN7.2	19	13,594,291 - 13,605,016 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	13,594,291 - 13,605,016 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	19	13,566,170 - 13,576,895 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	14,331,435 - 14,342,160 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	13,612,611 - 13,623,339 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	14,653,198 - 14,663,914 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	14,653,198 - 14,663,914 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	19	25,770,392 - 25,781,108 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	19	14,093,270 - 14,103,996 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	19	13,456,744 - 13,467,478 (+)	NCBI		Celera
RGSC_v3.1	19	14,098,095 - 14,108,822 (+)	NCBI
Cytogenetic Map	19	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,6-trinitrobenzenesulfonic acid (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

4-amino-2,6-dinitrotoluene (EXP)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP,ISO)

acrylamide (EXP,ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

amitrole (EXP)

ammonium chloride (EXP)

benzo[a]pyrene (EXP,ISO)

benzo[b]fluoranthene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP)

bisphenol F (EXP)

buta-1,3-diene (ISO)

butanal (ISO)

cadmium atom (EXP)

cadmium dichloride (EXP,ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chrysene (ISO)

cisplatin (ISO)

copper atom (EXP)

copper(0) (EXP)

copper(II) sulfate (ISO)

Cuprizon (EXP)

dibenz[a,h]anthracene (ISO)

diiodine (ISO)

doxorubicin (EXP)

ethanol (ISO)

ethylparaben (ISO)

fipronil (EXP)

furan (EXP)

genistein (EXP)

gentamycin (EXP)

graphite (EXP)

ketamine (EXP)

lipopolysaccharide (ISO)

methoxychlor (EXP)

mono(2-ethylhexyl) phthalate (ISO)

N-methyl-4-phenylpyridinium (EXP,ISO)

nickel atom (ISO)

okadaic acid (ISO)

paracetamol (EXP,ISO)

pentanal (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (EXP)

phenylephrine (EXP)

pioglitazone (ISO)

reserpine (EXP)

resveratrol (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tetrachloromethane (EXP)

tetraphene (ISO)

titanium dioxide (EXP,ISO)

trichloroethene (EXP)

triclosan (ISO)

triptonide (ISO)

valproic acid (EXP)

vinclozolin (EXP)

XL147 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

locomotory behavior (IEA,ISO,ISS)

negative regulation of protein ubiquitination (IDA)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IDA)

positive regulation of protein sumoylation (IDA)

signal transduction (IBA)

synaptic transmission, dopaminergic (IEA,ISO)

Cellular Component

plasma membrane (IDA,IEA)

synapse (IEA)

Molecular Function

G-protein beta-subunit binding (IBA,ISO)

GTP binding (IDA,IEA)

GTPase activity (IEA)

nucleotide binding (IEA)

phosphatidylinositol 3-kinase binding (IPI)

protein binding (IPI)

ubiquitin conjugating enzyme binding (IPI)

References

References - curated

#	Reference Title	Reference Citation
1.	Rhes: A striatal-specific Ras homolog related to Dexras1.	Falk JD, etal., J Neurosci Res 1999 Sep 15;57(6):782-8.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Rhes, a striatal specific protein, mediates mutant-huntingtin cytotoxicity.	Subramaniam S, etal., Science. 2009 Jun 5;324(5932):1327-30. doi: 10.1126/science.1172871.
7.	The small GTP-binding protein, Rhes, regulates signal transduction from G protein-coupled receptors.	Vargiu P, etal., Oncogene 2004 Jan 15;23(2):559-68.

Additional References at PubMed

PMID:11597759	PMID:11976265	PMID:15199135	PMID:16352400	PMID:18035555	PMID:18845937	PMID:18929545	PMID:19255495	PMID:22683505	PMID:24324270

Genomics

Comparative Map Data

Rasd2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	13,600,028 - 13,610,753 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	19	13,599,986 - 13,610,753 (+)	Ensembl				GRCr8
mRatBN7.2	19	13,594,291 - 13,605,016 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	13,594,291 - 13,605,016 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	19	13,566,170 - 13,576,895 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	14,331,435 - 14,342,160 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	13,612,611 - 13,623,339 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	14,653,198 - 14,663,914 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	14,653,198 - 14,663,914 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	19	25,770,392 - 25,781,108 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	19	14,093,270 - 14,103,996 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	19	13,456,744 - 13,467,478 (+)	NCBI		Celera
RGSC_v3.1	19	14,098,095 - 14,108,822 (+)	NCBI
Cytogenetic Map	19	p11	NCBI

RASD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	35,532,806 - 35,553,999 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	35,539,796 - 35,554,003 (+)	Ensembl			hg38	GRCh38
GRCh37	22	35,928,853 - 35,950,046 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	34,267,298 - 34,279,992 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	22	34,261,851 - 34,274,543	NCBI
Celera	22	19,740,616 - 19,753,311 (+)	NCBI		Celera
Cytogenetic Map	22	q12.3	NCBI
HuRef	22	18,896,460 - 18,909,156 (+)	NCBI		HuRef
CHM1_1	22	35,896,087 - 35,908,779 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	35,991,542 - 36,012,893 (+)	NCBI		T2T-CHM13v2.0

Rasd2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	75,940,572 - 75,950,741 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	75,940,572 - 75,950,741 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	8	75,213,944 - 75,224,113 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	75,213,944 - 75,224,113 (+)	Ensembl			mm10	GRCm38
MGSCv37	8	77,737,843 - 77,748,012 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	8	78,108,883 - 78,120,183 (+)	NCBI		MGSCv36	mm8
Celera	8	79,513,759 - 79,523,857 (+)	NCBI		Celera
Cytogenetic Map	8	C1	NCBI
cM Map	8	35.61	NCBI

Rasd2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	43,191,480 - 43,196,085 (+)	Ensembl
ChiLan1.0	NW_004955405	43,191,530 - 43,196,057 (+)	NCBI	ChiLan1.0	ChiLan1.0

RASD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	45,483,303 - 45,496,886 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	48,179,738 - 48,193,314 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	16,549,140 - 16,562,716 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	34,389,825 - 34,403,090 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	34,394,233 - 34,403,090 (+)	Ensembl			panPan2	panpan1.1

RASD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	28,626,761 - 28,637,861 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	28,626,121 - 28,632,851 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	28,567,593 - 28,577,591 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	29,414,289 - 29,424,287 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	29,414,218 - 29,424,195 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	29,139,536 - 29,149,534 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	29,448,752 - 29,458,766 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	29,629,446 - 29,639,450 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rasd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	11,932,176 - 11,942,201 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936492	4,942,566 - 4,954,881 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936492	4,942,590 - 4,954,881 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RASD2
(Sus scrofa - pig)

No map positions available.

RASD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	18,301,361 - 18,315,431 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	18,302,046 - 18,315,492 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666045	107,632,836 - 107,646,829 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rasd2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624750	285,565 - 327,299 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624750	285,654 - 294,341 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Rasd2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	17	4,598,669 - 4,609,460 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Rasd2
50 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	410
Count of miRNA genes:	233
Interacting mature miRNAs:	257
Transcripts:	ENSRNOT00000020017
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1549847	Bss8	Bone structure and strength QTL 8	4		lumbar vertebra strength trait (VT:0010574)	vertebra ultimate force (CMO:0001678)	19	1	31969901	Rat
8552935	Pigfal10	Plasma insulin-like growth factor 1 level QTL 10	5.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	19	7997750	52997750	Rat
9590298	Uminl5	Urine mineral level QTL 5	3.59	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	19	7997750	52997750	Rat
631840	Niddm38	Non-insulin dependent diabetes mellitus QTL 38	3.86		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	19	10329076	74246245	Rat
1358200	Insglur2	Insulin/glucose ratio QTL 2	4.1		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	19	5748064	50748064	Rat
10054132	Srcrt9	Stress Responsive Cort QTL 9	2.87	0.0017	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	19	1	27361636	Rat
1331737	Uae29	Urinary albumin excretion QTL 29	5.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	36289	74246245	Rat
61423	Cia14	Collagen induced arthritis QTL 14	3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	19	10833618	74246245	Rat
7411590	Foco7	Food consumption QTL 7	6.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	19	1	24694445	Rat
9590090	Insglur8	Insulin/glucose ratio QTL 8	10.81	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	19	7997750	52997750	Rat
9590250	Scort11	Serum corticosterone level QTL 11	23.45	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	19	7997750	52997750	Rat
7247442	Uae39	Urinary albumin excretion QTL 39			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	19	2194317	74246245	Rat
724566	Uae12	Urinary albumin excretion QTL 12	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	2194317	74246245	Rat

Markers in Region

RH130539

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	19	13,609,870 - 13,610,677 (+)	Marker Load Pipeline
mRatBN7.2	19	13,604,133 - 13,604,940 (+)	MAPPER	mRatBN7.2
Rnor_6.0	19	14,663,041 - 14,663,847	NCBI	Rnor6.0
Rnor_5.0	19	25,780,235 - 25,781,041	UniSTS	Rnor5.0
RGSC_v3.4	19	14,103,114 - 14,103,920	UniSTS	RGSC3.4
Celera	19	13,466,596 - 13,467,402	UniSTS
RH 3.4 Map	19	133.78	UniSTS
Cytogenetic Map	19	p11	UniSTS

BF403282

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	19	13,603,556 - 13,603,718 (+)	MAPPER	mRatBN7.2
Rnor_6.0	19	14,662,464 - 14,662,625	NCBI	Rnor6.0
Rnor_5.0	19	25,779,658 - 25,779,819	UniSTS	Rnor5.0
RGSC_v3.4	19	14,102,537 - 14,102,698	UniSTS	RGSC3.4
Celera	19	13,466,019 - 13,466,180	UniSTS
Cytogenetic Map	19	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	157	89	88	57	44	57	6	305	144	10	136	80	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_133568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF134409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000020017 ⟹ ENSRNOP00000020017

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	19	13,599,986 - 13,610,753 (+)	Ensembl
mRatBN7.2 Ensembl	19	13,594,291 - 13,605,016 (+)	Ensembl
Rnor_6.0 Ensembl	19	14,653,198 - 14,663,914 (+)	Ensembl

RefSeq Acc Id:

NM_133568 ⟹ NP_598252

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	13,600,028 - 13,610,753 (+)	NCBI
mRatBN7.2	19	13,594,291 - 13,605,016 (+)	NCBI
Rnor_6.0	19	14,653,198 - 14,663,914 (+)	NCBI
Rnor_5.0	19	25,770,392 - 25,781,108 (+)	NCBI
RGSC_v3.4	19	14,093,270 - 14,103,996 (+)	RGD
Celera	19	13,456,744 - 13,467,478 (+)	RGD

Sequence:

show sequence

GGGTGCAGCATCCGGAGCTCGAGCTTGGGCCATCCCGCGTGGACTCCACGTTCGCTGGCGGGAG
AGGACGAGGGAGGAGCCCACCCTAAGAAACTTCTCCCCCCTTTGGGGAGAGGAGGCACAGTGCT
GAGCGACGGCGGCTTCGGACGAAGTTGGAGCTGCTGAGCCTCGGGGCGGCGTTCAAGGCTCCTT
CCCACACGCGCGCTGAGCGCAGCTAGCGGCGTCGGGCGAGGAGCAAGCGGTGGTCCTTTCCGCG
AGGGTCAGCAGCCCGACTTCGGGCAGCCAGGAAGGCCGCGGCCCGGCGCGCAAGTCCCTCTACC
CTGCACGCGGCCACGGCGGGAGAAGGAGGTAACGTAAGCGGCCAGGCGGGTTCGTAGGCTGGAG
ACACACACCGATCGTCACCCCCAAAGGTCCCCCTGAGTCTCCAGGGTTCGCTTCTACATCCCCG
GAGTCGTGCCCCCTCCCCCCTCAGCGCGGAGCCCCAGGCGGGGACACCCCGAATTGAACGTTCC
CAAACCTCCGTGCACCTGGCTCAACCGGAGTCCCCCGTGTCAGGGCAGGGCAAGGCCGCCGGCG
GTGAGCCGGAGCCAGCCCAGCGCCCCGGCTCTACCGAGCCCTCGGAGCCCACCCATGGGTCATC
CCCTGCTCTGCGGGCCTCTTCGCCCTGTCGCGCTCAGCCCAGCTCCGGGCGCCGCGCGCAGGAG
GATCTGTACGCAGTGACCCTGGAGCCCCCGCAGACGCCGGGAGACTCGGCGGCGGGAGCCGCAG
GCGGTTCCCCACACCTCCAGGAGCTTCCAGGGAGCCCTCCAAGCCGTGCTCGGGGTCCGTCCCG
CTGTTCCCAGCCCAGAGCCATGATGAAGACCTTGTCCAGCGGGAACTGCACACTCAACGTGCCC
GCTAAGAACTCCTACCGCATGGTGGTGCTGGGTGCCTCCCGGGTGGGCAAGAGCTCCATTGTCT
CCCGTTTCCTTAATGGCCGCTTTGAGGATCAGTACACACCCACCATCGAGGACTTTCATCGCAA
GGTGTACAACATCCATGGGGACATGTACCAGCTGGACATCCTGGACACCTCTGGTAACCATCCG
TTCCCTGCCATGCGCCGGCTGTCTATCCTCACAGGAGACGTCTTCATCCTGGTGTTTAGCCTGG
ATAGCCGGGAGTCCTTCGACGAGGTCAAGCGCCTCCAGAAACAGATCCTGGAGGTCAAGTCCTG
CCTGAAGAATAAGACCAAGGAGGCCGCAGAGCTGCCTATGGTGATCTGTGGGAACAAGAATGAC
CACAGTGAGCTGTGCCGCCAGGTCCCTGCCATGGAGGCGGAACTGTTGGTGTCCGGGGATGAAA
ACTGCGCCTACTTCGAGGTGTCAGCCAAGAAGAACACGAACGTAAACGAGATGTTCTACGTGCT
GTTCAGCATGGCCAAGCTGCCCCACGAGATGAGCCCTGCACTGCACCACAAGATCTCCGTGCAG
TACGGTGACGCCTTCCACCCCCGGCCCTTCTGCATGCGTCGCACCAAGGTCGCAGGTGCCTATG
GCATGGTCTCGCCCTTCGCCCGCCGCCCCAGTGTCAACAGTGACCTCAAGTATATCAAGGCCAA
GGTCCTACGGGAGGGCCAGGCCCGAGAGAGGGACAAGTGCAGCATCCAGTGAGAGGCAGGGACT
TCGGGGAGGGGGCTTGGGCAGTGCCTTAAGGGAGGTGCCTGAGGATTCCCACTGCCCACATCCC
ACAGAGGGCCCTAGGTGTGTACACTGTGCCCATTCTCTTGATTCCTGGCCACCACCTGTGAGCT
ATGATTGCGGTTCCTTTGTGGGAGGACAGAGATGTGTCTGGGGGTATGTCAGCACTCACGCCAA
GACAATCTCCCAGTGACCTTAGAGCGGGAGGGATGGGGGAAAGGCCAGGAATCCTGCGTCAGAA
GCAAGATGCTCAGTACAAGTCACAGGATGAGAACATCTTAGCCAGATGTCCCAGCCAGATTCCC
TGGTGGCCTCTGCTCCCTCTGTGCAGACAGGCTTGGTCTCTATGCCTCTGGAGAAACCGCCCTC
CTGGGTCTTCAGCTCCTGCCCTCTGGCCCAGCTGTGTACCCCCTCGCCTCCAACTTAGCCCCTG
GCCACTCTGACGTTGAGCCAACAGAGAAACAGAGACAGACAGAGATGGAGAGACACGTGCCTGT
GTCCCTCAGACCACTGCCTCTTGGCTACATTCCCAGGCCTGTCCATATAACATTTCTCGTTGTT
TTGAAGTGTGTTTCCTGTTCTGTTTGCAGTAGACATGAAGTCCTTGTACTGTAAGAGCCCAATG
CCTTGTCTTTGACAGGGTTTCCCTACTCAAATCCATTGCTTTAGCTGGGGTCTCCCTTCCTGCT
CCCAGGCAGGCTGTGCAGCTGGGTCCTACCCAGTGTTCATCAGCTTACAAAGAGCCCACAGTGC
CACAGCCACCGCAGGACCCTCCTGCCCTCAGGAGAGGATGACGGGGCTTTGAGAATGTGACTCC
AAACCCTTCCGGTAACTAGTTCAGGACAGAGCTCTGACTGGATGCAGCTTTCTTCCGCTGTAGT
CCCTTAAACATCTGCTGAGTACCTACTGGATACTCGGTCACTTGTGTGCTAGGCAACAGTAGGC
GAGGGGCCTCATGTGTCCCCAGCTCCAGCCTCTGCCCGTCCATGGTGCCCCTTCTGCACACACA
GCTGTTAGAGGATGTGGAACAGCTGAGAGCCAGAGCCGAGTCCAGGACAGGTTGGAAGGAAGAC
TTATGGTGGGACTTCTCCTAGCGTTCAGGCTATGCTAGGTACACGGGAGTGGGGTTGAGGGACG
ACTATGACCCTGAAAACCAAAGGTCCCGTTCACCAACTCTTAATACATTTGTGCTTTCGTCTCC
ATAGTACTGCAGCTGGCCCACTGAGATGGCTCCGTGGGCCAAGACACGTGCTGCCAAGCTTTCA
GCCTGAGTTCGGTTCCAGGGTCCCATGAAGTAAGGAGAGGAGTAACTTGCTAGCCATCCTTTGA
CCTCTGCACATGCACACAGAGTGGTGAGGCTGGCGGTTATCAGAAACCATAGGAATCTACCAGT
GCATTCTCTCAAGGCCCAGGTCACTCACCGCAGGCGAGGCCAGCCATGGGCCTTCCACACACAC
CAGGTCACACCCTGCGCTGGAGCTCCCTGCGACGACAGGGATTTGGATCATGTTACACACCCCT
CCCCCAGAGCAATCACTGAGGTAATCTGTGGATGCTGTGCAATGCTCTTCTTAACGCACACCAG
GCCCAGCCCTGACTCCACACCTCAAACAGCTGCCGCCCAGCACAACTGCTTCAGCGCCTGCTTC
TGTCCTGCAGTGACCCCAGCCTCAACCCCGAGAGTATACCAGGTACTTGTCCAGGCAGGTGTTT
GGCCTGGCCCCATCCAGTCAGGCTCCATTGCGTGGACCTCTGTGTACACTATCAATTAAAGTTG
GTTTGTTAGCAGC

hide sequence

Protein Sequences


Protein RefSeqs	NP_598252	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD38928	(Get FASTA)	NCBI Sequence Viewer
	EDL87378	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000020017
	ENSRNOP00000020017.2
GenBank Protein	P63033	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_598252 ⟸ NM_133568

- UniProtKB:

P63033 (UniProtKB/Swiss-Prot), A6JYA0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MMKTLSSGNCTLNVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDFHRKVYNIHG
DMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDSRESFDEVKRLQKQILEVKSCLKNKTK
EAAELPMVICGNKNDHSELCRQVPAMEAELLVSGDENCAYFEVSAKKNTNVNEMFYVLFSMAKL
PHEMSPALHHKISVQYGDAFHPRPFCMRRTKVAGAYGMVSPFARRPSVNSDLKYIKAKVLREGQ
ARERDKCSIQ

hide sequence

Ensembl Acc Id:

ENSRNOP00000020017 ⟸ ENSRNOT00000020017

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P63033-F1-model_v2	AlphaFold	P63033	1-266	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700963

Promoter ID:

EPDNEW_R11486

Type:

single initiation site

Name:

Rasd2_1

Description:

RASD family, member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	19	14,653,162 - 14,653,222	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:628594	AgrOrtholog
BioCyc Gene	G2FUF-6418	BioCyc
Ensembl Genes	ENSRNOG00000014761	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000020017	ENTREZGENE
	ENSRNOT00000020017.4	UniProtKB/Swiss-Prot
Gene3D-CATH	3.40.50.300	UniProtKB/Swiss-Prot
InterPro	P-loop_NTPase	UniProtKB/Swiss-Prot
	Small_GTP-bd_dom	UniProtKB/Swiss-Prot
	Small_GTPase	UniProtKB/Swiss-Prot
	Small_GTPase_RasD	UniProtKB/Swiss-Prot
KEGG Report	rno:171099	UniProtKB/Swiss-Prot
NCBI Gene	171099	ENTREZGENE
PANTHER	GTP-BINDING PROTEIN RHES	UniProtKB/Swiss-Prot
	MIP08469P	UniProtKB/Swiss-Prot
Pfam	Ras	UniProtKB/Swiss-Prot
PhenoGen	Rasd2	PhenoGen
PRINTS	RASTRNSFRMNG	UniProtKB/Swiss-Prot
PROSITE	RAS	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000014761	RatGTEx
SMART	RAB	UniProtKB/Swiss-Prot
	RAN	UniProtKB/Swiss-Prot
	RAS	UniProtKB/Swiss-Prot
	RHO	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot
UniProt	A6JYA0	ENTREZGENE, UniProtKB/TrEMBL
	P63033	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q9WVD3	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Rasd2	RASD family, member 2			Symbol and Name status set to approved	1299863	APPROVED
2003-02-27	Rasd2	RASD family, member 2			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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