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Gene: Gprasp1 (G protein-coupled receptor associated sorting protein 1) Rattus norvegicus

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Symbol:

Gprasp1

Name:

G protein-coupled receptor associated sorting protein 1

RGD ID:

621343

Description:

Predicted to be involved in G protein-coupled receptor catabolic process and endosome to lysosome transport. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Orthologous to human GPRASP1 (G protein-coupled receptor associated sorting protein 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

G-protein coupled receptor-associated sorting protein 1; GASP-1; Per1 interacting protein; per1-interacting protein; pips

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	103,556,493 - 103,564,275 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	103,501,377 - 103,565,649 (+)	Ensembl				GRCr8
mRatBN7.2	X	98,764,853 - 98,772,685 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	98,709,841 - 98,772,851 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	100,897,429 - 100,905,214 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	104,408,031 - 104,415,816 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	101,961,938 - 101,969,720 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	106,306,795 - 106,313,904 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	106,306,795 - 106,313,853 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	106,806,369 - 106,867,373 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Celera	X	100,372,227 - 100,379,281 (-)	NCBI		Celera
Cytogenetic Map	X	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(S)-nicotine (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dinitrotoluene (EXP)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

amitrole (EXP)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

carbon nanotube (ISO)

cocaine (EXP)

copper atom (EXP)

copper(0) (EXP)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

dioxygen (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

flutamide (EXP)

folic acid (ISO)

gentamycin (EXP)

ginsenoside Rg2 (ISO)

lead diacetate (ISO)

maneb (ISO)

methimazole (EXP)

nickel atom (ISO)

nicotine (ISO)

okadaic acid (ISO)

ozone (ISO)

paraquat (ISO)

pentachlorophenol (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

rotenone (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sulfadimethoxine (EXP)

testosterone (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triclosan (ISO)

triphenyl phosphate (ISO)

tungsten (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

endosome to lysosome transport (ISO,ISS)

G protein-coupled receptor catabolic process (ISO,ISS)

Cellular Component

cytoplasm (IEA)

cytosol (IBA,ISO)

nucleus (IBA)

Molecular Function

protein binding (IPI,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	A novel protein interacts with a clock-related protein, rPer1.	Matsuki T, etal., Brain Res 2001 Oct 19;916(1-2):1-10.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	The circadian rhythm of Per1 gene product in the rat suprachiasmatic nucleus and its modulation by seasonal changes in daylength.	Sumova A, etal., Brain Res 2002 Aug 30;947(2):260-70.
8.	Ca2+/cAMP response element-binding protein (CREB)-dependent activation of Per1 is required for light-induced signaling in the suprachiasmatic nucleus circadian clock.	Tischkau SA, etal., J Biol Chem 2003 Jan 10;278(2):718-23.

Additional References at PubMed

PMID:16049099	PMID:16298334	PMID:23954414

Genomics

Comparative Map Data

Gprasp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	103,556,493 - 103,564,275 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	103,501,377 - 103,565,649 (+)	Ensembl				GRCr8
mRatBN7.2	X	98,764,853 - 98,772,685 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	98,709,841 - 98,772,851 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	100,897,429 - 100,905,214 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	104,408,031 - 104,415,816 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	101,961,938 - 101,969,720 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	106,306,795 - 106,313,904 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	106,306,795 - 106,313,853 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	106,806,369 - 106,867,373 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Celera	X	100,372,227 - 100,379,281 (-)	NCBI		Celera
Cytogenetic Map	X	q32	NCBI

GPRASP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	102,651,483 - 102,659,083 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	102,650,345 - 102,659,083 (+)	Ensembl			hg38	GRCh38
GRCh37	X	101,906,411 - 101,914,011 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	101,792,950 - 101,800,667 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	X	101,712,586 - 101,719,523	NCBI
Celera	X	102,344,925 - 102,352,642 (+)	NCBI		Celera
Cytogenetic Map	X	q22.1	NCBI
HuRef	X	91,571,439 - 91,579,193 (+)	NCBI		HuRef
CHM1_1	X	101,798,965 - 101,806,682 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	101,096,438 - 101,104,038 (+)	NCBI		T2T-CHM13v2.0

Gprasp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	134,643,441 - 134,704,217 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	134,643,482 - 134,704,223 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	135,742,692 - 135,803,468 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	135,742,733 - 135,803,474 (+)	Ensembl			mm10	GRCm38
MGSCv37	X	132,277,231 - 132,338,007 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	131,089,056 - 131,149,832 (+)	NCBI		MGSCv36	mm8
Celera	X	119,059,474 - 119,120,009 (+)	NCBI		Celera
Cytogenetic Map	X	F1	NCBI
cM Map	X	57.26	NCBI

Gprasp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955548	133,425 - 137,468 (+)	Ensembl
ChiLan1.0	NW_004955548	132,373 - 137,817 (+)	NCBI	ChiLan1.0	ChiLan1.0

GPRASP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	102,200,309 - 102,263,893 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	102,209,907 - 102,267,491 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	91,823,855 - 91,881,439 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	102,254,518 - 102,262,345 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2

GPRASP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	76,274,196 - 76,318,204 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	76,313,740 - 76,318,607 (+)	NCBI			canFam3	CanFam3.1
CanFam3.1 Ensembl	X	76,313,740 - 76,318,607 (+)	Ensembl			canFam3	CanFam3.1
ROS_Cfam_1.0	X	77,695,302 - 77,743,851 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	77,736,604 - 77,743,851 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	75,245,415 - 75,293,946 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	76,908,573 - 76,956,891 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	76,618,574 - 76,666,911 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Gprasp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	62,261,477 - 62,267,088 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936813	1,208,373 - 1,212,548 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936813	1,208,018 - 1,213,224 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GPRASP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	83,765,303 - 83,810,085 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	83,765,210 - 83,810,090 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	97,711,430 - 97,750,334 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GPRASP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	90,582,364 - 90,645,882 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666065	15,426,228 - 15,484,120 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gprasp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004625034	97,575 - 101,729 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004625034	97,240 - 102,427 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Gprasp1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	X	87,705,366 - 87,767,764 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Gprasp1
34 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	71
Count of miRNA genes:	57
Interacting mature miRNAs:	67
Transcripts:	ENSRNOT00000073661
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1598872	Memor14	Memory QTL 14	4.5		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	97528096	142528096	Rat
61430	Cia18	Collagen induced arthritis QTL 18	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	80434318	125434318	Rat
738029	Stresp2	Stress response QTL 2	3.4	0.0004	stress-related behavior trait (VT:0010451)	defensive burying - approach	X	92979612	117740458	Rat
738035	Stresp1	Stress response QTL 1	4.96	0.000011	stress-related behavior trait (VT:0010451)	defensive burying - coping	X	45182909	117740458	Rat
2302047	Pia34	Pristane induced arthritis QTL 34	5.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	19	96916163	141916163	Rat

Markers in Region

RH137646

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	98,772,407 - 98,772,527 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	106,313,627 - 106,313,746	NCBI	Rnor6.0
Rnor_5.0	X	106,806,477 - 106,806,596	UniSTS	Rnor5.0
Celera	X	100,372,335 - 100,372,454	UniSTS
Cytogenetic Map	X	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_134386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB051807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000073661 ⟹ ENSRNOP00000066239

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,544,489 - 103,564,938 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,765,581 - 98,772,634 (+)	Ensembl
Rnor_6.0 Ensembl	X	106,306,795 - 106,313,853 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101596 ⟹ ENSRNOP00000090886

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,511,442 - 103,564,938 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,764,770 - 98,772,851 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102627 ⟹ ENSRNOP00000091518

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,501,429 - 103,564,568 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,709,874 - 98,772,685 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102872 ⟹ ENSRNOP00000097511

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,501,526 - 103,565,649 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,709,841 - 98,772,851 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109064 ⟹ ENSRNOP00000079015

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,501,377 - 103,565,649 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,709,907 - 98,772,702 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112205 ⟹ ENSRNOP00000082826

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,554,285 - 103,564,687 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,709,874 - 98,772,851 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116397 ⟹ ENSRNOP00000091617

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,501,429 - 103,564,568 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,709,907 - 98,772,851 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119255 ⟹ ENSRNOP00000092743

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,501,528 - 103,565,649 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,709,841 - 98,772,851 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000142856 ⟹ ENSRNOP00000105702

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,544,448 - 103,564,938 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000165180 ⟹ ENSRNOP00000103519

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,544,448 - 103,564,938 (+)	Ensembl

RefSeq Acc Id:

NM_134386 ⟹ NP_599213

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	103,556,493 - 103,564,275 (+)	NCBI
mRatBN7.2	X	98,764,853 - 98,772,635 (+)	NCBI
Rnor_6.0	X	106,306,795 - 106,313,854 (+)	NCBI
Rnor_5.0	X	106,806,369 - 106,867,373 (-)	NCBI
Celera	X	100,372,227 - 100,379,281 (-)	RGD

Sequence:

show sequence

CTAGTTGCTGAGAGGGGCCCCGGTGCCCTGCGCCCTGGGTGCTGTCACTCCCCACAGGATCCTG
CTTGATGGAAAGTGTCCTGTCTGCGCGGTAGGTCTGGCATATTCTGACAGGCCACAGTGAGTGA
GCATCTGTACACCAGAGGCTTGAGAAAAGAGGAACAGGAAAATGGCGTGGATTTCTGGAGGTGT
GTGGTAATGGGAGTGGGCACCAGACAGTGAGTGGAGATGCAAAAAGGGTGGGGGTGACTGGCCA
GAACAGGTGGGAATAAGTGTCTCCTAATCTCGTTTCTCACAGCCTTGCAGGTACCTTCTACACT
GCCTTTCCCCTCCCTCCCAAATCTGGGGTCTGAAAAGATGGGGTGGGGATGATGACGGAGTCAT
AAATCCAAGGACCACTTCAGAACCTGCTTTCTAGAATGTACTGCGCCCTTCCCCCATTTTTTGC
TGCGCAAGGCAAGGAAACATGGCCACCTAGTGGCGAGTCTTCAGAATTGCAGAAGGGACTAATA
AGGATGACATCAAGGAGTGGGTGTTACCTCAGGAACCCTGCAGCCAGGCTAAATCCAGAATGTT
CCAGCAGTAGGACCCTAAATGCTAAAAGACACTTGATCTGGTTCTGATCCTTGGTGGCATTTTC
AACAAGATCAGCTGCTGCCATCATCTCCTGATTGTCATACATTTTCATGTCTATCCACAGCCCT
GCTTTAAGGCTGCAAGCAAGGAAAGAAGGCTTCTAGGCGACTGTCTCAGATCTCTGGAGGTTGG
TGAGACTCAGGGGCAGTGCAGGAGCCAGCCACTGAGGAGGCAAATCCAAATTGCTCTAACCCAA
GGGGGTGCATGTTGCCTTACTGTCCCCTTAATTTGCCCACAGCTGCTACCACCATTTTCTGATT
GTCATACATTTTCATGTCTGTCCACAGGTCTGCTTTAAGGCTGGTTTTTCTGCAATCAAGGAAA
GAAGGGTTCAAGGCGACTGTCTCAGATCTTGAAGGTTGGTGACACTCAGGGGTAGTACAAGAGC
CAGCCACTGAGAAGGCACATTCATTTTGCTCTAACCAAATTCAGATCACTGTCCCCTTAATTTG
CCCAGTAGTATAGCATGCTCTATTTCCTCTCAGGGATACTAAGAATGTTGAGGTAGGTGTGAGT
TAGCCTATGACCCAGTACAACAGCTCACTGCTGGGACCAGGGAATAGACGCTTTAGACACAAAC
AGGCATGGTTTTGTTGTTTGTTCTTTGTTTGGGTTCAGGGATGTGTGCCCACCTTCCGAGCACT
GAGACTTCATTTTGTTTTATGCACTTGTAGGACTCCCTGCAGTCAGCCAGCTGTTTGTCTTAAC
ACTGCTTGAACACAGAAGAGAGGGGAGAACTGCACCACATCTGTGAAGGTGGGTATGGGACAGG
GTTCACTTTTAGGTGGGGTCGTCTCAATCACCCCAGAGTGAGTACTGTGAGATTTAGGGTCCCC
TCTCTGTCCATTTGTAGCGTGTGCACTTTCTCCTCCCCTCTGCACCTGTTTCCCAGCAGGCAAA
AGGAACATAGGGATTTCTTATGACTGGGCTCTTCCACTCAAGCGTCACACCCAGGTGTCTCTGT
GTAAGTTTCTGCAGCAGACAATGGAATTGGGTAGGACTGATTTCCTCATTCCTCTCTCCTAGAT
CACCTGCAGTGGCCGCTTGGTGGTGCTGAGGTTGCCGCTGACCAGTGCAATCAACAGGTCTGCA
CCCACCTAGGACCTGTTCGTCGTCCTCCAGCTTGATTTCACCTCTTCTGCACTGTATCTGTGTT
ATTGACTGAGACTGCTTGGGTAGGAGCCTCCTTGAGTGCTGAACTGTTCATTTCAGTCTAATTC
TTTTCAATCTCATACCAAGTTACCAAAGGTGGTAGTGAAGAGCTATCTTGTAACAGATATCTAG
TGAAGGTTCACTGTTAAGTGCTATACATTGGGGCTTCATCTACCGTATACTATGACTGGGGCAG
AGGTTGAGCCTGGTGCCCAGGCAAAGGCTGAAAATAAGCCTGGGGATGAGAATGCTAATGCTGC
TGAAGTAGAGCCTGAAGTTCCGTTAGTGGTCAGACCCAAGGTTAGGACACAAATGATGACTGGA
GCAAGACCCAAAGTGAAGCCTAAGGGTACCCCTGGAGCAAGGCCTAAAGGTGAAACCAGTTCAC
CAGGTGGGGCATATGCTAAATGTAAGCCCAGGTCAATCCCTATTTCACGATCTAAGCATGATGC
ACAAGTCTGGGCCCCGAGTAAGTTTCGTGGTGAGTCCATGTCAAAGATGGGGAAGCAATGTCAG
ATCAGTGCTGCAGACTCCCCACTGGTCAGTAATGATTCTGGGGCGGTTGCTCAAGCTAAGTGCC
TGTCTGTAGATAGAGAACTTGCTAATATGGACACTGAGAGTATTCCCAAAAAGGCCAGTTCTCC
AGCAAGATTCCAGCCTTCATTTGGCCCAGAGGAGGGAACCAGTATGGGATCCTGGTACCGTCCC
AGGCCTATCCCTAAAGGAGAGGCATATGAGAATTCTGATTTCAAATGGGCAGATAAATCCTCAG
GAAGTTCCTCCTTCTGGAATAGAGATGAAACCAGTACAAGATTTCGTCCTAGGAAAAGCATGAA
ATCCAATACCAGATTCAGGCACATGGCCAAACAAGAGGCAAATACCATGTCTAGACACAAGAAC
AAACAGGAGTTCTATAATATTTCCAGTTCTGATTCTGAAGATGAGTCTGCTAAGACTCCCTGGT
TCTGGGCCAAAGACAAGCCCAAAGTCTGGTCTAGGCCCAAAGAAGAGCCCAATACTAGGTCCTG
GTTTAGGTCTAAGAAAGAAGTCCGTGTTGAATCCACTTCTGGGTCTGAATGTGAAAACCATACA
AAATCTTTGTTTTGGTCTGGAGAAGAGGCTAAATGTAGGTCTAAACCCAGAGCCAGGAAAGGGG
TCAATATGAGGGCCAGGCACCAGGCCAAGCGAGAAGCTTATAGTGATGTCACATCTGGATCTGT
AGATAAAAATAAGAAAGATTCCTGGTTCTTGCCTGAAGAGAAAGCTAATGCCTTTTCAAAGTCT
AAGACAAAGAAAGAGCCCAGAACCAGAGCAATGCCAAGGGAAGAAGTCAAAACTAAGGCCAGAG
CAAGTACCAAACAAGAAGCCAGGCCAGAGGAGGAAGTCCTCGTTGGGGCTTGGGTTCTGGACAC
CCAGGACAACACTATGGGGGAGAGGATAAGCATGAAGACCACTTGTGTAGAGGAGGAGCCTATT
GTTGGAGATTGGTTCTGGAGTGAAGAAGAAGCCAGTGTGGACTCTGAGACCGGTCTTAAATCCA
GACCAAGGGCTAAGGAGGAACAAGTTAGTAGTTTCTGTTTAGGATCTGGAAAGAAGACCAGTAT
GGAAAGTGGGCCAAAGGCTACTTCTAAATCTATGCCAGTAGCTAAGGATGATGAGGTCATTATT
GGATCCTGGTTCTGGGCTGATGATGAAGAGATCAGCTTACAGGCTGATGATGAGTCTATTTTTG
GATCTTGGTTCTGGGGCACTGGTGAGAAAAGCCTTAGATCTGTTGGAGTCAGTTGTGAGAAGAT
GCCCAAGTCTGGGGAAAAAGAAGTTACTGATTCCTGGTTCTGGGCTGGAGAAGTCAATACTGAG
GCTGAGATGGAGGAACAGGCCAGTTCAGCATCCACAAAAGGAACAATCTTTGTGCCTTGGTTTT
GGTCTGAAAAGCAAGCACATATGGATTTAGGAACCGAACCTTGCTCTGACATCATGGCAGGAGC
TGAGGAGGAGCCCATAATTGGGCCCTGGTTCTGGGCTAAAGTAGATAATAGTGTGGAGGCTGAA
GTTAATAGTAAGTCTAGCCTTGAAGATGAGGAAGAACCCATTAGATCACCTTGGTTTGGGGCCA
GAGAACAACCCAATATGAAGTATGCAGCTGGTGTCGGATACAAGCCTATGGCAGAAGCCGAGGA
GGCTAACAAAAAGTCGTGTGTCTGGGCAAAAGAGCCCTGTTTGTATCCTACCAATAGAGAAAGC
TTGAAATCTACTCTGGGAGAGAAAGAGGACACTGTTGATCCATGGCTCTGGTCCAATAATTACC
CAAGGACCGAGACCATCACAGGGTCCTGGCTCTGGGCTGCAGAAGAGGGAAATATAGATGATGA
GACTGGAGAAGAAATCAAACTACCAACTTTAGAGGACAATGTATTCAATTCTTGGTCCTGGAAA
GAAAATGAAGAAACCGTTGTAGAGGCTCCCAACAGAGAAGAGTCCAAGCCAGAAGCGGAAGAGG
AAGATATTATTGGCTCTTGGTTTTGGGCTGGGGATGAAGACAGGTTTCAGCCAGCTGCTAAGAT
TAAGGAAGAGAACAAGATAGCACCTGAAGATGAAGATACAGTTGGATCCTGGTTCTGGGGCAAG
GAAGAGGCCAGTGTAGAGGCAGTGAAAGGGGGTACTTTTGAGTCTGTGTCTGGAATTAAGGAAG
AGAAAGCTACTGGGTCGTGGTTCTGGACTGATAAGGCCAAAATAGGGGCTGGGCCACAGACTGT
CGAAACTGGGTCAGAAACTGAAGATGAGGCAATTTTTGAGTCCCTGATCTGGGCCGCAAAAAAG
GACAGTATGCAAACAGGAGTAAACCGTGTGTCCAAGCCAAAGGATGAGGGTGAAGGGATTGAGT
CCTGGCTCTGGTCTGGTGACAAGGCCACTACAGAATCTAAAACTGTGACGGTCAGTGAGTCTAG
TCCAGAAAATGGGAAAGAGTCCATTGTTAAGTTTGGGTCAAGAGCAAAGGATGAAGTGATTAAC
AAGACTGGCAGCGGTGACAATTGTAAATTTAGTACAGAAGCTGAAAGCATAGTGGGACCCTGGT
TCTGGGAAGGAGATGAAGCTAGCTTTGAATCAAACCCTGTTCCTGTATGCAAGGCCGCTTGTGA
ACCTGAGTCTTCAACTGAACATGAACCTGATCCTTCCCGCAGGCCTCAGAGCTGGGATGAGGTC
ACTGTTCAGTTTAAGCCTGGTCCATGGGGAAAGGCTGGCTTCCCATCCTTAAACCCCTTCCGAT
TCCCAAAAGAAGCAGCATCTCTGTTTGCAGAAATGTTTGGGGGAAAGCCTAAGCTTGTGGAAGT
TGGTACTGAAAGAGAGCCTGAACCCCAGTTCCCATTTCAGTATGATCCTTCTTACCGGTCAGTC
CGGGAAATTCGGGAGCATCTTAAGGCCAGGGAGAGTGCACAGGCTGAGAACTGGTCTTGCAACT
GCATCCAGTGTGAGCTTAGAATTGGTTCTGAGGAGTTTGAGGAACTTCTTTTAATGATGGACAG
AAATCGTGATCCATTTATCCATGAGATATCTAAAATTGCAATGGGCATGAGAGGTGCTTCTCAG
TTTACCCGAGATTTCATTCGAAACTCGGGTGTTATCTCACTTATTGAAGCCCTGATGAATTATC
CTTCCTCCCGAGCGAGGACTGCCTTTTTGGAAAACATGATTCAAATGGCTCCAACTTATCCAGA
CCTAAACATGATCGAGACATATGTGTGTCAGGTGTGTGAGGATACCTTTGATTATGACTTGGAT
TCCTCTGACCAGTTGTCTGGACTGACAATGATTACACACCTCACTACTACTTTTGACTATCACA
AAGTGGTTGTCGCTTACTTGGCTGGCTTTTACTACCTACTGAATTCGGGCAATACCACAACAAG
GTTTCATGTTCTGAAACTGCTACTAAATTTGTCTGAAAGCCTTGTCATGACAAAACGCCTACTT
ATTACTGATTCAGTGTCAGAATTTATGGCCCTTTTTAATAGGGAGGACTCAGATGAAAACATTC
AAATTATTCTTGCAATATTTGAGAATATCAGTAAAAATATTCAAAAAGAGGCACTGTTTGCTGA
TGATGAGGAAGAGGAGGAGGAGGAGGAGGCGGTGAATCTTGAACCGCTTATTTCAGCATTCCGT
GAGGCTGAAAAATTTGCCAAGGAACTGAAACGTAAAACCGACGATCAGAAATCACCCTGAAGCA
GAACAAAAAGAGTAATGTGCTTAACCATTTGCCTCCGGTTGTCCTTGTGTTCCCAAGTCATTGA
CCCTCAAATAATGCTTTGCTTTCCCAGCTGACTCTGTGTTTCACTGTGCCTCTTTATGCTGGTG
GTAATTATACCCAACCCTGTGTAATCTGTATCATTATTCTAATGCCAAATGAAGATACAAGTGA
AAACACATGACACTTGTTGGTGACCCTCGTTTCGTTGACTGTGATGTTCAGTATTTGAGTGTAA
AGTGAACTGAGCCGGTGTAAATAAGATTCCCTTCTAAATGTTGTTCTCATGTATATTTGAGTCT
TGTGCTTCAATAAAGTTCTATGTGGACGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_063279769 ⟹ XP_063135839

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	103,557,146 - 103,564,275 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_599213	(Get FASTA)	NCBI Sequence Viewer
	XP_063135839	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAB64314	(Get FASTA)	NCBI Sequence Viewer
	EDL85822	(Get FASTA)	NCBI Sequence Viewer
	EDL85823	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000066239
GenBank Protein	Q920R4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_599213 ⟸ NM_134386

- UniProtKB:

Q920R4 (UniProtKB/Swiss-Prot), M0R9R0 (UniProtKB/TrEMBL), A6KT36 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTGAEVEPGAQAKAENKPGDENANAAEVEPEVPLVVRPKVRTQMMTGARPKVKPKGTPGARPKG
ETSSPGGAYAKCKPRSIPISRSKHDAQVWAPSKFRGESMSKMGKQCQISAADSPLVSNDSGAVA
QAKCLSVDRELANMDTESIPKKASSPARFQPSFGPEEGTSMGSWYRPRPIPKGEAYENSDFKWA
DKSSGSSSFWNRDETSTRFRPRKSMKSNTRFRHMAKQEANTMSRHKNKQEFYNISSSDSEDESA
KTPWFWAKDKPKVWSRPKEEPNTRSWFRSKKEVRVESTSGSECENHTKSLFWSGEEAKCRSKPR
ARKGVNMRARHQAKREAYSDVTSGSVDKNKKDSWFLPEEKANAFSKSKTKKEPRTRAMPREEVK
TKARASTKQEARPEEEVLVGAWVLDTQDNTMGERISMKTTCVEEEPIVGDWFWSEEEASVDSET
GLKSRPRAKEEQVSSFCLGSGKKTSMESGPKATSKSMPVAKDDEVIIGSWFWADDEEISLQADD
ESIFGSWFWGTGEKSLRSVGVSCEKMPKSGEKEVTDSWFWAGEVNTEAEMEEQASSASTKGTIF
VPWFWSEKQAHMDLGTEPCSDIMAGAEEEPIIGPWFWAKVDNSVEAEVNSKSSLEDEEEPIRSP
WFGAREQPNMKYAAGVGYKPMAEAEEANKKSCVWAKEPCLYPTNRESLKSTLGEKEDTVDPWLW
SNNYPRTETITGSWLWAAEEGNIDDETGEEIKLPTLEDNVFNSWSWKENEETVVEAPNREESKP
EAEEEDIIGSWFWAGDEDRFQPAAKIKEENKIAPEDEDTVGSWFWGKEEASVEAVKGGTFESVS
GIKEEKATGSWFWTDKAKIGAGPQTVETGSETEDEAIFESLIWAAKKDSMQTGVNRVSKPKDEG
EGIESWLWSGDKATTESKTVTVSESSPENGKESIVKFGSRAKDEVINKTGSGDNCKFSTEAESI
VGPWFWEGDEASFESNPVPVCKAACEPESSTEHEPDPSRRPQSWDEVTVQFKPGPWGKAGFPSL
NPFRFPKEAASLFAEMFGGKPKLVEVGTEREPEPQFPFQYDPSYRSVREIREHLKARESAQAEN
WSCNCIQCELRIGSEEFEELLLMMDRNRDPFIHEISKIAMGMRGASQFTRDFIRNSGVISLIEA
LMNYPSSRARTAFLENMIQMAPTYPDLNMIETYVCQVCEDTFDYDLDSSDQLSGLTMITHLTTT
FDYHKVVVAYLAGFYYLLNSGNTTTRFHVLKLLLNLSESLVMTKRLLITDSVSEFMALFNREDS
DENIQIILAIFENISKNIQKEALFADDEEEEEEEEAVNLEPLISAFREAEKFAKELKRKTDDQK
SP

hide sequence

Ensembl Acc Id:

ENSRNOP00000066239 ⟸ ENSRNOT00000073661

Ensembl Acc Id:

ENSRNOP00000091518 ⟸ ENSRNOT00000102627

Ensembl Acc Id:

ENSRNOP00000091617 ⟸ ENSRNOT00000116397

Ensembl Acc Id:

ENSRNOP00000079015 ⟸ ENSRNOT00000109064

Ensembl Acc Id:

ENSRNOP00000092743 ⟸ ENSRNOT00000119255

Ensembl Acc Id:

ENSRNOP00000097511 ⟸ ENSRNOT00000102872

Ensembl Acc Id:

ENSRNOP00000082826 ⟸ ENSRNOT00000112205

Ensembl Acc Id:

ENSRNOP00000090886 ⟸ ENSRNOT00000101596

RefSeq Acc Id:	XP_063135839 ⟸ XM_063279769
- Peptide Label:	isoform X1
- UniProtKB:	Q920R4 (UniProtKB/Swiss-Prot), A6KT36 (UniProtKB/TrEMBL), M0R9R0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000103519 ⟸ ENSRNOT00000165180

Ensembl Acc Id:

ENSRNOP00000105702 ⟸ ENSRNOT00000142856

Protein Domains

Armadillo repeat-containing

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q920R4-F1-model_v2	AlphaFold	Q920R4	1-1346	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621343	AgrOrtholog
BioCyc Gene	G2FUF-1647	BioCyc
Ensembl Genes	ENSRNOG00000049985	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000073661	ENTREZGENE
InterPro	ARM-rpt_dom	UniProtKB/Swiss-Prot
	ARM-type_fold	UniProtKB/Swiss-Prot
	BHLHb9/GASP-1/GASP-2	UniProtKB/Swiss-Prot
KEGG Report	rno:171407	UniProtKB/Swiss-Prot
NCBI Gene	171407	ENTREZGENE
PANTHER	G-PROTEIN COUPLED RECEPTOR-ASSOCIATED SORTING PROTEIN 1	UniProtKB/Swiss-Prot
	PTHR46414	UniProtKB/Swiss-Prot
Pfam	Arm_2	UniProtKB/Swiss-Prot
PhenoGen	Gprasp1	PhenoGen
RatGTEx	ENSRNOG00000049985	RatGTEx
Superfamily-SCOP	SSF48371	UniProtKB/Swiss-Prot
UniProt	A6KT36	ENTREZGENE, UniProtKB/TrEMBL
	GASP1_RAT	UniProtKB/Swiss-Prot
	M0R9R0	ENTREZGENE, UniProtKB/TrEMBL
	Q920R4	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-01-20	Gprasp1	G protein-coupled receptor associated sorting protein 1	pips	Per1 interacting protein	Symbol and Name updated	1299863	APPROVED
2002-08-07	pips	Per1 interacting protein			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in the hypothalamus including the suprachiasmatic nuclei (SCN) of the brain	633668
gene_physical_interaction	binds to Per1 in vivo	633668

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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