Advanced Search (OLGA)

Gene: Ambra1 (autophagy and beclin 1 regulator 1) Rattus norvegicus

Analyze

Symbol:

Ambra1

Name:

autophagy and beclin 1 regulator 1

RGD ID:

621330

Description:

Predicted to enable enzyme binding activity; protein phosphatase activator activity; and ubiquitin-like ligase-substrate adaptor activity. Involved in cellular response to starvation; negative regulation of cardiac muscle cell apoptotic process; and positive regulation of autophagy. Predicted to be located in axoneme; cytosol; and phagocytic vesicle. Predicted to be part of Cul4-RING E3 ubiquitin ligase complex. Predicted to be active in cytoskeleton; mitochondrion; and nucleus. Orthologous to human AMBRA1 (autophagy and beclin 1 regulator 1); PARTICIPATES IN inositol metabolic pathway; mitochondrial autophagy pathway; phosphoinositide metabolic pathway; INTERACTS WITH ammonium chloride; atrazine; Bardoxolone methyl.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

activating molecule in BECN1-regulated autophagy protein 1; autophagy/beclin 1 regulator 1; ischemia related factor NYW-1; Nyw1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AMBRA1 (autophagy and beclin 1 regulator 1)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Ambra1 (autophagy/beclin 1 regulator 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ambra1 (autophagy and beclin 1 regulator 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AMBRA1 (autophagy and beclin 1 regulator 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AMBRA1 (autophagy and beclin 1 regulator 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ambra1 (autophagy and beclin 1 regulator 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AMBRA1 (autophagy and beclin 1 regulator 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AMBRA1 (autophagy and beclin 1 regulator 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ambra1 (autophagy and beclin 1 regulator 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ambra1 (autophagy and beclin 1 regulator 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Ambra1 (autophagy/beclin 1 regulator 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	AMBRA1 (autophagy and beclin 1 regulator 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ambra1b (autophagy/beclin-1 regulator 1b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	ambra1a (autophagy/beclin-1 regulator 1a)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	ambra1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ambra1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	98,156,626 - 98,345,876 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	98,156,652 - 98,345,872 (+)	Ensembl				GRCr8
mRatBN7.2	3	77,700,936 - 77,890,221 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	77,700,936 - 77,890,221 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	81,176,110 - 81,365,398 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	89,775,135 - 89,964,426 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	87,626,389 - 87,815,655 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	80,634,470 - 80,830,068 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	80,634,470 - 80,830,068 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	87,332,352 - 87,528,736 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	76,109,632 - 76,298,784 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	76,904,996 - 77,092,869 (+)	NCBI		Celera
RGSC_v3.1	3	76,049,420 - 76,098,445 (+)	NCBI
Cytogenetic Map	3	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease (ISO)

esophageal atresia (ISO)

multiple system atrophy (ISO)

neural tube defect (ISO)

Spinal Cord Injuries (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-(tert-butylimino)-5-phenyl-3-(propan-2-yl)-1,3,5-thiadiazinan-4-one (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

ammonium chloride (EXP)

arsane (ISO)

arsenic atom (ISO)

atrazine (EXP)

Bardoxolone methyl (EXP)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

buprofezin (ISO)

cadmium dichloride (EXP)

CCCP (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

cocaine (EXP)

copper(II) sulfate (ISO)

decabromodiphenyl ether (EXP)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

doxorubicin (EXP,ISO)

epoxiconazole (ISO)

formaldehyde (ISO)

FR900359 (ISO)

gallic acid (ISO)

gentamycin (EXP)

lipopolysaccharide (EXP)

methoxychlor (EXP)

monosodium L-glutamate (ISO)

oxaliplatin (EXP)

perfluorohexanesulfonic acid (ISO)

phenobarbital (ISO)

promethazine (ISO)

propiconazole (ISO)

rotenone (ISO)

serpentine asbestos (ISO)

sodium arsenate (ISO)

titanium dioxide (ISO)

topotecan (EXP)

triptonide (ISO)

tungsten (ISO)

Urolithin A (EXP,ISO)

valproic acid (ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autophagosome assembly (IBA,IEA,ISO)

autophagy (IEA,ISO)

cell differentiation (IEA)

cellular response to starvation (IEP)

DNA-templated transcription (IEA)

mitophagy (IBA,IEA,ISO)

negative regulation of cardiac muscle cell apoptotic process (IMP)

negative regulation of cell population proliferation (ISO)

negative regulation of neuron apoptotic process (ISO)

nervous system development (IEA)

neural tube development (ISO)

positive regulation of autophagy (IEA,IMP,ISO)

positive regulation of free ubiquitin chain polymerization (IEA,ISO)

positive regulation of mitophagy (IEA,ISO)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IEA,ISO)

positive regulation of regulatory T cell differentiation (IEA,ISO)

proteasome-mediated ubiquitin-dependent protein catabolic process (IEA,ISO)

protein polyubiquitination (IEA,ISO)

regulation of G1/S transition of mitotic cell cycle (IEA,ISO)

regulation of transcription by RNA polymerase II (IEA,ISO)

response to mitochondrial depolarisation (IEA,ISO)

response to nutrient levels (IEP)

Cellular Component

autophagosome (IEA)

axoneme (IEA,ISO)

Cul4-RING E3 ubiquitin ligase complex (IBA,IEA,ISO)

cytoplasm (IEA,ISO)

cytoplasmic vesicle (IEA)

cytoskeleton (IEA,ISO)

cytosol (IEA,ISO)

endoplasmic reticulum (IEA)

focal adhesion (IEA)

mitochondrion (IEA,ISO)

nucleus (IEA,ISO)

phagocytic vesicle (IEA,ISO)

Molecular Function

GTPase binding (IEA,ISO)

protein binding (IPI,ISO)

protein phosphatase activator activity (IEA,ISO)

protein phosphatase binding (IEA,ISO)

ubiquitin protein ligase binding (IEA,ISO)

ubiquitin-like ligase-substrate adaptor activity (IBA,IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

inositol metabolic pathway (ISO)

mitochondrial autophagy pathway (ISO)

phosphoinositide metabolic pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Mitochondrial autophagy involving renal injury and aging is modulated by caloric intake in aged rat kidneys.	Cui J, etal., PLoS One. 2013;8(7):e69720. doi: 10.1371/journal.pone.0069720. Epub 2013 Jul 22.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Mitochondria and mitophagy: the yin and yang of cell death control.	Kubli DA and Gustafsson AB, Circ Res. 2012 Oct 12;111(9):1208-21. doi: 10.1161/CIRCRESAHA.112.265819.
4.	AMBRA1, a novel α-synuclein-binding protein, is implicated in the pathogenesis of multiple system atrophy.	Miki Y, etal., Brain Pathol. 2018 Jan;28(1):28-42. doi: 10.1111/bpa.12461. Epub 2017 Mar 15.
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	SMPDB Annotation Import Pipeline	Pipeline to import SMPDB annotations from SMPDB into RGD
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation
9.	Expression of Ambra1 in mouse brain during physiological and Alzheimer type aging.	Sepe S, etal., Neurobiol Aging. 2014 Jan;35(1):96-108. doi: 10.1016/j.neurobiolaging.2013.07.001. Epub 2013 Aug 2.
10.	Ambra1 modulates starvation-induced autophagy through AMPK signaling pathway in cardiomyocytes.	Shi C, etal., Biochem Biophys Res Commun. 2014 Sep 26;452(3):308-14. doi: 10.1016/j.bbrc.2014.08.017. Epub 2014 Aug 10.

Additional References at PubMed

PMID:12477932	PMID:17589504	PMID:21753002	PMID:22493499	PMID:24089209	PMID:24879156	PMID:25215947	PMID:25891078	PMID:33083461

Genomics

Comparative Map Data

Ambra1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	98,156,626 - 98,345,876 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	98,156,652 - 98,345,872 (+)	Ensembl				GRCr8
mRatBN7.2	3	77,700,936 - 77,890,221 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	77,700,936 - 77,890,221 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	81,176,110 - 81,365,398 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	89,775,135 - 89,964,426 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	87,626,389 - 87,815,655 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	80,634,470 - 80,830,068 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	80,634,470 - 80,830,068 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	87,332,352 - 87,528,736 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	76,109,632 - 76,298,784 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	76,904,996 - 77,092,869 (+)	NCBI		Celera
RGSC_v3.1	3	76,049,420 - 76,098,445 (+)	NCBI
Cytogenetic Map	3	q24	NCBI

AMBRA1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	46,396,412 - 46,594,023 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	46,396,414 - 46,594,125 (-)	Ensembl			hg38	GRCh38
GRCh37	11	46,417,962 - 46,615,573 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	46,374,541 - 46,569,490 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	11	46,566,035 - 46,760,894 (-)	NCBI		Celera
Cytogenetic Map	11	p11.2	NCBI
HuRef	11	46,124,697 - 46,322,307 (-)	NCBI		HuRef
CHM1_1	11	46,416,414 - 46,614,031 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	46,552,487 - 46,750,082 (-)	NCBI		T2T-CHM13v2.0

Ambra1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	91,560,464 - 91,749,194 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	91,560,479 - 91,749,194 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	91,730,138 - 91,918,849 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	91,730,134 - 91,918,849 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	91,570,295 - 91,759,006 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	91,531,062 - 91,719,688 (+)	NCBI		MGSCv36	mm8
Celera	2	93,119,370 - 93,309,250 (+)	NCBI		Celera
Cytogenetic Map	2	E1	NCBI
cM Map	2	50.63	NCBI

Ambra1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	1,455,380 - 1,644,452 (+)	Ensembl
ChiLan1.0	NW_004955422	1,455,392 - 1,644,368 (+)	NCBI	ChiLan1.0	ChiLan1.0

AMBRA1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	48,609,561 - 48,810,770 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	48,616,387 - 48,817,652 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	46,355,026 - 46,556,091 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	46,905,454 - 47,103,205 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	46,905,454 - 47,103,205 (-)	Ensembl			panPan2	panpan1.1

AMBRA1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	42,903,815 - 43,073,918 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	42,932,513 - 43,072,827 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	41,632,454 - 41,802,531 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	43,559,883 - 43,730,082 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	43,559,910 - 43,764,738 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	43,045,129 - 43,215,092 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	42,596,905 - 42,766,984 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	43,330,120 - 43,500,181 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ambra1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	20,382,209 - 20,565,226 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936562	2,493,774 - 2,676,912 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936562	2,493,823 - 2,676,868 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AMBRA1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	15,935,375 - 16,119,079 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	15,935,354 - 16,119,082 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	17,313,942 - 17,465,127 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AMBRA1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	18,777,807 - 18,932,784 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	18,734,926 - 18,932,785 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	116,020,095 - 116,218,202 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ambra1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	1,966,898 - 2,160,465 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624767	1,967,002 - 2,160,102 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ambra1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	65,873,993 - 66,062,789 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ambra1
1256 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	155
Count of miRNA genes:	102
Interacting mature miRNAs:	129
Transcripts:	ENSRNOT00000045644
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300178	Hrtrt4	Heart rate QTL 4	3.74		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	51490129	111359995	Rat
61377	Edpm3	Estrogen-dependent pituitary mass QTL 3	7.05	0.038	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	73592611	110333156	Rat
1358293	Bw38	Body weight QTL 38	6	0.0000031	body mass (VT:0001259)	body weight (CMO:0000012)	3	74364268	119364268	Rat
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	96509147	141509147	Rat
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	73592512	136118980	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
1354589	Bw31	Body weight QTL 31	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	53651826	98651826	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	49872657	138829559	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582221	Kidm30	Kidney mass QTL 30	3.5	0.0008	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	3	85062224	136118980	Rat
1582210	Bw71	Body weight QTL 71	3.3	0.0012	body mass (VT:0001259)	body weight (CMO:0000012)	3	85062224	136118980	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	81425008	141509147	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	70845569	136091483	Rat
1600376	Arunc5	Aerobic running capacity QTL 5		0.21	exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	3	93829559	138829559	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
2292613	Ept16	Estrogen-induced pituitary tumorigenesis QTL 16	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	96509147	141509147	Rat
738019	Anxrr10	Anxiety related response QTL 10	3.9		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	3	58925062	103925062	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	70311536	115311536	Rat
631200	Cm25	Cardiac mass QTL 25	4.8	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	3	81541464	126563126	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	90755164	141509147	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	36721849	110333156	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	1	141509147	Rat
1354597	Kidm13	Kidney mass QTL 13	2.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	3	42158111	124558371	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	42158111	124558371	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	5675975	141509147	Rat
1358186	Ept2	Estrogen-induced pituitary tumorigenesis QTL 2	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat

Markers in Region

A001T07

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	77,890,028 - 77,890,137 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	80,829,876 - 80,829,984	NCBI	Rnor6.0
Rnor_5.0	3	87,528,544 - 87,528,652	UniSTS	Rnor5.0
RGSC_v3.4	3	76,298,592 - 76,298,700	UniSTS	RGSC3.4
Celera	3	77,092,677 - 77,092,785	UniSTS
Cytogenetic Map	3	q24	UniSTS

WI-14603

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	77,890,091 - 77,890,217 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	80,829,939 - 80,830,064	NCBI	Rnor6.0
Rnor_5.0	3	87,528,607 - 87,528,732	UniSTS	Rnor5.0
RGSC_v3.4	3	76,298,655 - 76,298,780	UniSTS	RGSC3.4
Celera	3	77,092,740 - 77,092,865	UniSTS
Cytogenetic Map	3	q24	UniSTS

BF397482

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	77,717,281 - 77,717,407 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	80,650,815 - 80,650,940	NCBI	Rnor6.0
Rnor_5.0	3	87,348,697 - 87,348,822	UniSTS	Rnor5.0
RGSC_v3.4	3	76,125,976 - 76,126,101	UniSTS	RGSC3.4
Celera	3	76,921,359 - 76,921,484	UniSTS
RH 3.4 Map	3	704.9	UniSTS
Cytogenetic Map	3	q24	UniSTS

AI176253

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	77,844,887 - 77,845,006 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	80,784,470 - 80,784,588	NCBI	Rnor6.0
Rnor_5.0	3	87,483,343 - 87,483,461	UniSTS	Rnor5.0
RGSC_v3.4	3	76,253,465 - 76,253,583	UniSTS	RGSC3.4
Celera	3	77,047,569 - 77,047,687	UniSTS
Cytogenetic Map	3	q24	UniSTS

AI176683

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	77,700,842 - 77,701,050 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	80,634,377 - 80,634,584	NCBI	Rnor6.0
Rnor_5.0	3	87,332,259 - 87,332,466	UniSTS	Rnor5.0
RGSC_v3.4	3	76,109,539 - 76,109,746	UniSTS	RGSC3.4
Celera	3	76,904,903 - 76,905,110	UniSTS
Cytogenetic Map	3	q24	UniSTS

UniSTS:225336

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	77,718,970 - 77,719,101 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	80,652,504 - 80,652,634	NCBI	Rnor6.0
Rnor_5.0	3	87,350,386 - 87,350,516	UniSTS	Rnor5.0
RGSC_v3.4	3	76,127,665 - 76,127,795	UniSTS	RGSC3.4
Celera	3	76,923,048 - 76,923,178	UniSTS
Cytogenetic Map	3	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001134341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105763	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB027149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC100094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000045644 ⟹ ENSRNOP00000039742

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	98,156,652 - 98,345,872 (+)	Ensembl
mRatBN7.2 Ensembl	3	77,700,936 - 77,890,221 (+)	Ensembl
Rnor_6.0 Ensembl	3	80,634,470 - 80,830,068 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000084809 ⟹ ENSRNOP00000075219

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	3	80,676,820 - 80,732,084 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085614 ⟹ ENSRNOP00000073365

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	98,156,652 - 98,345,872 (+)	Ensembl
mRatBN7.2 Ensembl	3	77,700,936 - 77,890,221 (+)	Ensembl
Rnor_6.0 Ensembl	3	80,670,140 - 80,830,058 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093866 ⟹ ENSRNOP00000087603

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	98,156,652 - 98,345,872 (+)	Ensembl
mRatBN7.2 Ensembl	3	77,700,936 - 77,890,221 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105609 ⟹ ENSRNOP00000091295

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	98,156,668 - 98,345,872 (+)	Ensembl
mRatBN7.2 Ensembl	3	77,700,989 - 77,890,218 (+)	Ensembl

RefSeq Acc Id:

NM_001134341 ⟹ NP_001127813

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,156,626 - 98,345,876 (+)	NCBI
mRatBN7.2	3	77,700,936 - 77,890,221 (+)	NCBI
Rnor_6.0	3	80,634,470 - 80,830,068 (+)	NCBI
Rnor_5.0	3	87,332,352 - 87,528,736 (+)	NCBI
RGSC_v3.4	3	76,109,632 - 76,298,784 (+)	RGD
Celera	3	76,904,996 - 77,092,869 (+)	RGD

Sequence:

show sequence

TTCCTTTGATGTCTGGGCGTTCGTGTGTTCGATGATCTTTTGCAGCGTCTTCTAGGTTGATGTC
TCCAGAGCGGCGGCGGCGGTGCCAGGTCCTGGACTGAGTTATCCGGGAGACCCCGGGCTCTGGC
CGCTTTCTTCCGCTGGTCGGTCGAGCGGGCCCCTCGCTTCCTTCAGCCTCTCCCCGCCTTCCGT
CCGTGGCTCCGTGCGCTCGTTGGCCTTCCGGCCAAGCTCTCACTCGCCTCGCAGATTTCCATGA
GGACAGCTGACAAGGACCTGAATGGCCTCATTTTAGCTACTTCTGTCTGTGGAGCTATTTCTTG
CTCCTTCAGTTCTGATCCCTGGTGCGACAGTGGCTCCTGAGCACCATGAAAGTTGTCCCAGAGA
AGAATGCTGTACGAATCCTCTGGGGCCGAGAGCGGGGCACTCGTGCCATGGGTGCCCAGCGGCT
TCTGCAGGAGCTGGTGGAGGATAAGACTCGATGGATGAAATGGGAGGGCAAGAGAGTAGAACTT
CCTGATAGTCCACGCTCGACCTTCTTACTGGCCTTCAGCCCAGACAGGACTCTCTTGGCGTCCA
CACATGTGAACCATAACATCTATATTACAGAGGTTAAGACTGGCAAGTGTGTTCACTCTCTGAT
TGGACACCGCCGTACTCCATGGTGTGTCACTTTTCATCCCACTATCTCAGGCCTTATTGCTTCT
GGCTGCCTAGATGGGGAAGTTAGGATTTGGGACTTACATGGTGGCAGTGAAAGCTGGTTCACAG
ATAGCAACAATGCCATAGCTTCTTTGGCTTTCCACCCTACGGCTCAGCTCCTGCTGATCGCCAC
TGCAAATGAGATCCATTTCTGGGATTGGAGTCGTCGGGAACCCTTTGCTGTGGTGAAAACAGCT
AGTGAGATGGAGCGTGTTCGTCTGGTGAGATTTGATCCACTTGGACACTACTTACTTACAGCTA
TTGTTAACCCCTCTAATCAGCAGGGTGATGATGAACCAGAAATCCCTATAGATGGAACAGAATT
ATCTCATTACCGTCAGCGTGCCCTCCTGCAATCACAGCCAGTTCGCCGGACACCCCTCCTCCAC
AATTTCCTGCATATGCTGTCCTCCCGCTCCTCTGGCATCCAGGTGGGAGAGCAAAGCACAGTAC
AAGATTCTGCTACCCCCTCACCCCCACCGCCTCCCCCTCAGCCCTCCACGGAGCGTCCCAGGAC
TTCCGCTTACATCAGACTCCGACAGCGGGTCAGTTACCCCACCACAGTTGAGTGCTGCCAGCAC
CCTGGGATCCTGTGCCTTTGCAGCCGTTGTGCTGGCACTCGAGTTCCTTCCCTCTTGCCACACC
AGGACAGTGTCCCCCCTGCTTCTGCCAGAGCTACTACCCCTTCCTTTTCTTTTGTACAGACCGA
GCCCTTCCATCCCCCGGAGCAGGCTTCATCAACGCAGCAGGACCAAGGCCTCCTGAACCGGCCG
TCTGCCTTCAGTACAGTCCAGAGCAGCACTGCGGGCAACACGCTCCGCAACCTCAGTCTGGGTC
CTACCCGTCGCTCTTTGGGGGGCCCACTGTCCAGCCACCCATCTAGGTATCACAGAGAACTAGC
CCCTGGGCTGACAGGTTCTGAGTGGACCCGGACAGTACTCACTCTGAACTCACGTTCTGAGGTA
GAATCTATGCCCCCACCGAGGACCAGTGCCTCCTCAGTGAGTTTGCTTTCTGTACTGAGACAGC
AGGAAGGTGGCTCTCAGGCATCTGTGTATACTTCAGCCACAGAAGGGAGGGGTTTTCCATCATC
AGGGTTGGCAACTGAGTCAGATGGAGGGAATGGTTCCAGCCAAAACAACTCAGGCAACATTCGC
CATGAGCTTCAGTGTGACCTGAGACGCTTTTTTTTGGAGTATGACAGGCTGCAGGAGCTGGATC
AGAGCCTGAGTGGGGAAACTCCCCAGACCCAACAGGCCCAGGAAATGCTCAACAATAATATTGA
ATCTGAGAGACCAGGTCCTTCCCATCAGCCTACCCCACACAGCAGTGAGAACAACTCCAACCTT
TCTCGGGGCCACCTTAATCGATGCCGTGCTTGCCATAATCTTCTAACCTTCAACAATGATACCC
TTCGTTGGGAAAGAACCACACCTAACTACTCATCCGGTGAGGCTAGCTCTTCCTGGCATGTCTC
CACTACTTTTGAGGGCATGCCACCGAGTGGCAACCAACTACCACCTCTTGAGCGGACTGAGGGC
CAAATGCCTAACTCCAGCAGGCTGGAGTTGAGCAGTTCTGCTAGTTCACAAGAGGAGAGGACTG
TGGGGGTGGCCTTTAACCAGGAGACCGGCCATTGGGAACGAATTTATACCCAGTCCAGCAGATC
TGGAACTGTATCACAGGAGGCCTTACATCAAGATATGCCTGAGGAAAGCTCTGAGGAAGACTCC
CTGAGGAGGAGGCTGCTGGAGTCTTCCCTCATTTCATTATCCCGTTATGATGGAGCAGGATCCA
GAGAGCACCCAATTTACCCAGACCCAGCGAGATTATCTCCTGCTGCATACTACGCCCAGAGGAT
GATCCAGTATCTCTCAAGGAGAGACAGTATTCGCCAGCGCTCCATGCGCTACCAACAGAATCGG
CTTCGTTCTTCCACCTCCTCTTCTTCCTCAGACAACCAGGGTCCATCAGTAGAGGGAACCGACT
TGGAATTTGAGGACTTTGAGGACAATGGTGACAGATCTAGGCACCGAGCTCCCCGAAATGCCCG
AATGTCTGCACCATCACTTGGACGCTTTGTCCCAAGGCGTTTTTTGCTGCCTGAGTACTTGCCT
TATGCTGGGATTTTTCATGAGCGTGGACAGCCTGGCTTGGCTACTCATTCTTCTGTTAACAGGG
TCCTGGCAGGGGCAGTAATTGGAGATGGACAGTCTGCTGTGGCCAGTAACATTGCCAATACTAC
CTACAGGCTCCAGTGGTGGGACTTCACCAAGTTTGACCTTCCAGAAATCAGTAATGCCTCCGTG
AATGTCCTGGTACAGAACTGCAAGATCTACAATGATGCCAGCTGTGACATTTCTGCAGATGGCC
AGCTCCTGGCAGCTTTCATCCCGAGTAGCCAGAGGGGCTTTCCTGATGAAGGCATCCTGGCAGT
GTATTCCCTGGCCCCCCATAACTTGGGGGAAATGCTCTACACCAAGCGATTTGGTCCCAATGCC
ATTTCTGTAAGCCTGTCCCCAATGGGCCGATACGTTATGGTGGGCTTGGCCTCACGAAGGATCC
TGCTGCACCCCTCTACAGAGCACATGGTAGCCCAGGTCTTCAGGCTGCAGCAGGCCCATGGTGG
TGAGACTTCCATGAGGAGAGTTTTCAACGTCCTTTACCCCATGCCTGCGGACCAGCGGAGACAC
GTCAGCATCAACTCTGCCCGCTGGCTACCTGAGCCAGGGCTCGGTTTGGCCTATGGCACCAACA
AAGGAGACCTGGTGATCTGCCGACCAGAGGCCTTAAACTCTGGCATTGAGTACTACTGGGACCA
GCTAAATGAAACGGTCTTCACTGTCCACTCAAGTAGCAGGAGCAGCGAGCGGCCTGGAACCAGC
AGAGCCACATGGCGGACAGACAGAGACATGGGCTTGATGAATGCAATTGGGCTGCAACCTCGGA
ACCCTACCACCTCTGTGACATCTCAGGGCACCCAGACTCTGGCCCTCCAGTTGCAGAATGCTGA
AACACAGACTGAGAGGGAGGAAGAGGAACCAGGGACAGCATCCTCAGGTCCTGGTGAAGGCGAG
GGCTCGGAATATGGTGGCAGTGGGGAAGATGCCCTCAGCCGGATCCAGAGGCTAATGGCCGAGG
GTGGCATGACAGCTGTGGTACAGCGAGAACAGAGTACCACCATGGCCTCCATGGGTGGCTTCGG
CAACAACATCATCGTTAGCCACCGCATTCACCGCAGCTCCCAGACAGGCACAGAGTCAGGGGCT
GCTCGTACCTCCTCACCCCAGCCCTCCACCTCTCGAGGACTACTCTCAGAACCTGGGCAACTGG
CAGAGCGAGGACTAAGCCCCCGGACAGCCTCCTGGGACCAGCCTAGTACCTCTGGAAGGGAACT
ACCCCAGCCAGCCCTGTCCTCTTCCTCCCCTGTCCCCATTCCAGTCCCCCTTGCCAGCAATGAG
GGACCAACCATGCACTGCAATGTGACCAATAACAGTCACCTTCCTGAGGGTGATAGTAGCAATG
TGGGGGAAGCTGCAGGCCCTAGTGGGGAGCCACGGAACCGATAGAGACAAAACCAGGTACTGGT
ACCTCCCTCAAGCTGCTGAGCAGGAGCAGGACCTCACGGCTGGCTGGGAACTGGACACAGAAGA
GCTGATGCTTGCATCCAGGAACAGGAGCAATGAGAGGGTGGGGCAGTGGGTAAGGGGCAGTCCA
ACTGGCAAGGCTGGCCTGGGATACTAGAGCCTTCCATGATCTAGAGCCCAGAAGAGCCTCACTG
CTGAACCTGGTGTGAATGAAGAAGCAAGTGGGTATCTCTGCTATGAGCCCCATTTCTCCTAGGA
TCACTGACCTAGGGGACTCAACCCTGGGCATGAGCCCCAGAAGAGCGAAGTCTTCCAGAGCTAG
ACCACACCATCCTGGACAGAATGGTGGGACAGTTCTTCTCCGCCCACTACTGGAGGGAAGAGCC
ACCAGGAGCAGAGGAGCAGCGCCCCCCCCCCCCCAATTGCTTCCATCTTTAAAACTTCCAGAGT
TCCAGCCTCTCACATCCTCTTAGCCCACAGAGACGGAAAGGTCAAGCCCAGCTTCCATGCCAGT
GACTTGTTACACTCACGAGTGCGACACCTGTGGAGTGAAGGAGATAGCCTACTTGACTGACACA
GGATGGAGTCGATACACGGTGGTGGACAGGTCCTCAGGAGTGGGGGGGGTGTAGGCTGGCCCGC
CCCCAGCATGTCCACCAAGCTCCCCCCTTCCACAAGACCCTCCGTGCAGCACCTATGGGTGTCA
GTATTACCTAAGCATAGGCCAAAGCCAGCCCAAGGTTGGAGGGAGGAGATTCCAGGTCAGAATG
TGAGGTCTTGGTCTGTGACTTGAGGTGTTGCATGTGGAATCCTGAACTGTACGTGTAGTTTTTA
GTGGAGAAATCAAGGCTCTGATCATTTTGTTTTTAGTATGAAAATGTGATTTCCTTTCTGTTTG
TCACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGACAGTCTACTGCTAATGAGGGAGACA
CCAAAGATCTACATCATTAAAATGATGACATGCCCCTCATCA

hide sequence

RefSeq Acc Id:

XM_008762030 ⟹ XP_008760252

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,156,732 - 98,345,873 (+)	NCBI
mRatBN7.2	3	77,701,048 - 77,890,218 (+)	NCBI
Rnor_6.0	3	80,634,630 - 80,830,065 (+)	NCBI

Sequence:

show sequence

CTCGCTTCCTTCAGCCTCTCCCCGCCTTCCGTCCGTGGCTCCGTGCGCTCGTTGGCCTTCCGGC
CAAGCTCTCACTCGCCTCGCAGCCAAGAACCTGACCTGGGCTGACTCTTAAGATTGAAGAACAG
TGAACTCAGTATCCGTTGAGCCAAGGCTTGGACACCTGCCTCTGATACTGTCTGAAAGGAAAGC
CTGGATTCAAATCTTGCTCTGGCTACTGACTTATTTGATTTCCATGAGGACAGCTGACAAGGAC
CTGAATGGCCTCATTTTAGCTACTTCTGTCTGTGGAGCTATTTCTTGCTCCTTCAGTTCTGATC
CCTGGTGCGACAGTGGCTCCTGAGCACCATGAAAGTTGTCCCAGAGAAGAATGCTGTACGAATC
CTCTGGGGCCGAGAGCGGGGCACTCGTGCCATGGGTGCCCAGCGGCTTCTGCAGGAGCTGGTGG
AGGATAAGACTCGATGGATGAAATGGGAGGGCAAGAGAGTAGAACTTCCTGATAGTCCCACGCT
CGACTTCTTACTGGCCTTCAGCCCAGACAGGACTCTCTTGGCGTCCACACATGTGAACCATAAC
ATCTATATTACAGAGGTTAAGACTGGCAAGTGTGTTCACTCTCTGATTGGACACCGCCGTACTC
CATGGTGTGTCACTTTTCATCCCACTATCTCAGGCCTTATTGCTTCTGGCTGCCTAGATGGGGA
AGTTAGGATTTGGGACTTACATGGTGGCAGTGAAAGCTGGTTCACAGATAGCAACAATGCCATA
GCTTCTTTGGCTTTCCACCCTACGGCTCAGCTCCTGCTGATCGCCACTGCAAATGAGATCCATT
TCTGGGATTGGAGTCGTCGGGAACCCTTTGCTGTGGTGAAAACAGCTAGTGAGATGGAGCGTGT
TCGTCTGGTGAGATTTGATCCACTTGGACACTACTTACTTACAGCTATTGTTAACCCCTCTAAT
CAGCAGGGTGATGATGAACCAGAAATCCCTATAGATGGAACAGAATTATCTCATTACCGTCAGC
GTGCCCTCCTGCAATCACAGCCAGTTCGCCGGACACCCCTCCTCCACAATTTCCTGCATATGCT
GTCCTCCCGCTCCTCTGGCATCCAGGTGGGAGAGCAAAGCACAGTACAAGATTCTGCTACCCCC
TCACCCCCACCGCCTCCCCCTCAGCCCTCCACGGAGCGTCCCAGGACTTCCGCTTACATCAGAC
TCCGACAGCGGGTCAGTTACCCCACCACAGTTGAGTGCTGCCAGCACCCTGGGATCCTGTGCCT
TTGCAGCCGTTGTGCTGGCACTCGAGTTCCTTCCCTCTTGCCACACCAGGACAGTGTCCCCCCT
GCTTCTGCCAGAGCTACTACCCCTTCCTTTTCTTTTGTACAGACCGAGCCCTTCCATCCCCCGG
AGCAGGCTTCATCAACGCAGCAGGACCAAGGCCTCCTGAACCGGCCGTCTGCCTTCAGTACAGT
CCAGAGCAGCACTGCGGGCAACACGCTCCGCAACCTCAGTCTGGGTCCTACCCGTCGCTCTTTG
GGGGGCCCACTGTCCAGCCACCCATCTAGGTATCACAGAGAACTAGCCCCTGGGCTGACAGGTT
CTGAGTGGACCCGGACAGTACTCACTCTGAACTCACGTTCTGAGGTAGAATCTATGCCCCCACC
GAGGACCAGTGCCTCCTCAGTGAGTTTGCTTTCTGTACTGAGACAGCAGGAAGGTGGCTCTCAG
GCATCTGTGTATACTTCAGCCACAGAAGGGAGGGGTTTTCCATCATCAGGGTTGGCAACTGAGT
CAGATGGAGGGAATGGTTCCAGCCAAAACAACTCAGGCAACATTCGCCATGAGCTTCAGTGTGA
CCTGAGACGCTTTTTTTTGGAGTATGACAGGCTGCAGGAGCTGGATCAGAGCCTGAGTGGGGAA
ACTCCCCAGACCCAACAGGCCCAGGAAATGCTCAACAATAATATTGAATCTGAGAGACCAGGTC
CTTCCCATCAGCCTACCCCACACAGCAGTGAGAACAACTCCAACCTTTCTCGGGGCCACCTTAA
TCGATGCCGTGCTTGCCATAATCTTCTAACCTTCAACAATGATACCCTTCGTTGGGAAAGAACC
ACACCTAACTACTCATCCGGTGAGGCTAGCTCTTCCTGGCATGTCTCCACTACTTTTGAGGGCA
TGCCACCGAGTGGCAACCAACTACCACCTCTTGAGCGGACTGAGGGCCAAATGCCTAACTCCAG
CAGGCTGGAGTTGAGCAGTTCTGCTAGTTCACAAGAGGAGAGGACTGTGGGGGTGGCCTTTAAC
CAGGAGACCGGCCATTGGGAACGAATTTATACCCAGTCCAGCAGATCTGGAACTGTATCACAGG
AGGCCTTACATCAAGATATGCCTGAGGAAAGCTCTGAGGAAGACTCCCTGAGGAGGAGGCTGCT
GGAGTCTTCCCTCATTTCATTATCCCGTTATGATGGAGCAGGATCCAGAGAGCACCCAATTTAC
CCAGACCCAGCGAGATTATCTCCTGCTGCATACTACGCCCAGAGGATGATCCAGTATCTCTCAA
GGAGAGACAGTATTCGCCAGCGCTCCATGCGCTACCAACAGAATCGGCTTCGTTCTTCCACCTC
CTCTTCTTCCTCAGACAACCAGGGTCCATCAGTAGAGGGAACCGACTTGGAATTTGAGGACTTT
GAGGACAATGGTGACAGATCTAGGCACCGAGCTCCCCGAAATGCCCGAATGTCTGCACCATCAC
TTGGACGCTTTGTCCCAAGGCGTTTTTTGCTGCCTGAGTACTTGCCTTATGCTGGGATTTTTCA
TGAGCGTGGACAGCCTGGCTTGGCTACTCATTCTTCTGTTAACAGGGTCCTGGCAGGGGCAGTA
ATTGGAGATGGACAGTCTGCTGTGGCCAGTAACATTGCCAATACTACCTACAGGCTCCAGTGGT
GGGACTTCACCAAGTTTGACCTTCCAGAAATCAGTAATGCCTCCGTGAATGTCCTGGTACAGAA
CTGCAAGATCTACAATGATGCCAGCTGTGACATTTCTGCAGATGGCCAGCTCCTGGCAGCTTTC
ATCCCGAGTAGCCAGAGGGGCTTTCCTGATGAAGGCATCCTGGCAGTGTATTCCCTGGCCCCCC
ATAACTTGGGGGAAATGCTCTACACCAAGCGATTTGGTCCCAATGCCATTTCTGTAAGCCTGTC
CCCAATGGGCCGATACGTTATGGTGGGCTTGGCCTCACGAAGGATCCTGCTGCACCCCTCTACA
GAGCACATGGTAGCCCAGGTCTTCAGGCTGCAGCAGGCCCATGGTGGTGAGACTTCCATGAGGA
GAGTTTTCAACGTCCTTTACCCCATGCCTGCGGACCAGCGGAGACACGTCAGCATCAACTCTGC
CCGCTGGCTACCTGAGCCAGGGCTCGGTTTGGCCTATGGCACCAACAAAGGAGACCTGGTGATC
TGCCGACCAGAGGCCTTAAACTCTGGCATTGAGTACTACTGGGACCAGCTAAATGAAACGGTCT
TCACTGTCCACTCAAGTAGCAGGAGCAGCGAGCGGCCTGGAACCAGCAGAGCCACATGGCGGAC
AGACAGAGACATGGGCTTGATGAATGCAATTGGGCTGCAACCTCGGAACCCTACCACCTCTGTG
ACATCTCAGGGCACCCAGACTCTGGCCCTCCAGTTGCAGAATGCTGAAACACAGACTGAGAGGG
AGGAAGAGGAACCAGGGACAGCATCCTCAGGTCCTGGTGAAGGCGAGGGCTCGGAATATGGTGG
CAGTGGGGAAGATGCCCTCAGCCGGATCCAGAGGCTAATGGCCGAGGGTGGCATGACAGCTGTG
GTACAGCGAGAACAGAGTACCACCATGGCCTCCATGGGTGGCTTCGGCAACAACATCATCGTTA
GCCACCGCATTCACCGCAGCTCCCAGACAGGCACAGAGTCAGGGGCTGCTCGTACCTCCTCACC
CCAGCCCTCCACCTCTCGAGGACTACTCTCAGAACCTGGGCAACTGGCAGAGCGAGGACTAAGC
CCCCGGACAGCCTCCTGGGACCAGCCTAGTACCTCTGGAAGGGAACTACCCCAGCCAGCCCTGT
CCTCTTCCTCCCCTGTCCCCATTCCAGTCCCCCTTGCCAGCAATGAGGGACCAACCATGCACTG
CAATGTGACCAATAACAGTCACCTTCCTGAGGGTGATAGTAGCAATGTGGGGGAAGCTGCAGGC
CCTAGTGGGGAGCCACGGAACCGATAGAGACAAAACCAGGTACTGGTACCTCCCTCAAGCTGCT
GAGCAGGAGCAGGACCTCACGGCTGGCTGGGAACTGGACACAGAAGAGCTGATGCTTGCATCCA
GGAACAGGAGCAATGAGAGGGTGGGGCAGTGGGTAAGGGGCAGTCCAACTGGCAAGGCTGGCCT
GGGATACTAGAGCCTTCCATGATCTAGAGCCCAGAAGAGCCTCACTGCTGAACCTGGTGTGAAT
GAAGAAGCAAGTGGGTATCTCTGCTATGAGCCCCATTTCTCCTAGGATCACTGACCTAGGGGAC
TCAACCCTGGGCATGAGCCCCAGAAGAGCGAAGTCTTCCAGAGCTAGACCACACCATCCTGGAC
AGAATGGTGGGACAGTTCTTCTCCGCCCACTACTGGAGGGAAGAGCCACCAGGAGCAGAGGAGC
AGCGCCCCCCCCCCCCCAATTGCTTCCATCTTTAAAACTTCCAGAGTTCCAGCCTCTCACATCC
TCTTAGCCCACAGAGACGGAAAGGTCAAGCCCAGCTTCCATGCCAGTGACTTGTTACACTCACG
AGTGCGACACCTGTGGAGTGAAGGAGATAGCCTACTTGACTGACACAGGATGGAGTCGATACAC
GGTGGTGGACAGGTCCTCAGGAGTGGGGGGGGTGTAGGCTGGCCCGCCCCCAGCATGTCCACCA
AGCTCCCCCCTTCCACAAGACCCTCCGTGCAGCACCTATGGGTGTCAGTATTACCTAAGCATAG
GCCAAAGCCAGCCCAAGGTTGGAGGGAGGAGATTCCAGGTCAGAATGTGAGGTCTTGGTCTGTG
ACTTGAGGTGTTGCATGTGGAATCCTGAACTGTACGTGTAGTTTTTAGTGGAGAAATCAAGGCT
CTGATCATTTTGTTTTTAGTATGAAAATGTGATTTCCTTTCTGTTTGTCACTCATCATAGAAAC
ATTGTGGTGGGAGGAGAGGGGACAGTCTACTGCTAATGAGGGAGACACCAAAGATCTACATCAT
TAAAATGATGACATGCCCCTCA

hide sequence

RefSeq Acc Id:

XM_008762031 ⟹ XP_008760253

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,156,732 - 98,345,873 (+)	NCBI
mRatBN7.2	3	77,701,048 - 77,890,218 (+)	NCBI
Rnor_6.0	3	80,634,632 - 80,830,065 (+)	NCBI

Sequence:

show sequence

CGCTTCCTTCAGCCTCTCCCCGCCTTCCGTCCGTGGCTCCGTGCGCTCGTTGGCCTTCCGGCCA
AGCTCTCACTCGCCTCGCAGATTTCCATGAGGACAGCTGACAAGGACCTGAATGGCCTCATTTT
AGCTACTTCTGTCTGTGGAGCTATTTCTTGCTCCTTCAGTTCTGATCCCTGGTGCGACAGTGGC
TCCTGAGCACCATGAAAGTTGTCCCAGAGAAGAATGCTGTACGAATCCTCTGGGGCCGAGAGCG
GGGCACTCGTGCCATGGGTGCCCAGCGGCTTCTGCAGGAGCTGGTGGAGGATAAGACTCGATGG
ATGAAATGGGAGGGCAAGAGAGTAGAACTTCCTGATAGTCCCACGCTCGACTTCTTACTGGCCT
TCAGCCCAGACAGGACTCTCTTGGCGTCCACACATGTGAACCATAACATCTATATTACAGAGGT
TAAGACTGGCAAGTGTGTTCACTCTCTGATTGGACACCGCCGTACTCCATGGTGTGTCACTTTT
CATCCCACTATCTCAGGCCTTATTGCTTCTGGCTGCCTAGATGGGGAAGTTAGGATTTGGGACT
TACATGGTGGCAGTGAAAGCTGGTTCACAGATAGCAACAATGCCATAGCTTCTTTGGCTTTCCA
CCCTACGGCTCAGCTCCTGCTGATCGCCACTGCAAATGAGATCCATTTCTGGGATTGGAGTCGT
CGGGAACCCTTTGCTGTGGTGAAAACAGCTAGTGAGATGGAGCGTGTTCGTCTGGTGAGATTTG
ATCCACTTGGACACTACTTACTTACAGCTATTGTTAACCCCTCTAATCAGCAGGGTGATGATGA
ACCAGAAATCCCTATAGATGGAACAGAATTATCTCATTACCGTCAGCGTGCCCTCCTGCAATCA
CAGCCAGTTCGCCGGACACCCCTCCTCCACAATTTCCTGCATATGCTGTCCTCCCGCTCCTCTG
GCATCCAGGTGGGAGAGCAAAGCACAGTACAAGATTCTGCTACCCCCTCACCCCCACCGCCTCC
CCCTCAGCCCTCCACGGAGCGTCCCAGGACTTCCGCTTACATCAGACTCCGACAGCGGGTCAGT
TACCCCACCACAGTTGAGTGCTGCCAGCACCCTGGGATCCTGTGCCTTTGCAGCCGTTGTGCTG
GCACTCGAGTTCCTTCCCTCTTGCCACACCAGGACAGTGTCCCCCCTGCTTCTGCCAGAGCTAC
TACCCCTTCCTTTTCTTTTGTACAGACCGAGCCCTTCCATCCCCCGGAGCAGGCTTCATCAACG
CAGCAGGACCAAGGCCTCCTGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCAGCACTGCGG
GCAACACGCTCCGCAACCTCAGTCTGGGTCCTACCCGTCGCTCTTTGGGGGGCCCACTGTCCAG
CCACCCATCTAGGTATCACAGAGAACTAGCCCCTGGGCTGACAGGTTCTGAGTGGACCCGGACA
GTACTCACTCTGAACTCACGTTCTGAGGTAGAATCTATGCCCCCACCGAGGACCAGTGCCTCCT
CAGTGAGTTTGCTTTCTGTACTGAGACAGCAGGAAGGTGGCTCTCAGGCATCTGTGTATACTTC
AGCCACAGAAGGGAGGGGTTTTCCATCATCAGGGTTGGCAACTGAGTCAGATGGAGGGAATGGT
TCCAGCCAAAACAACTCAGGCAACATTCGCCATGAGCTTCAGTGTGACCTGAGACGCTTTTTTT
TGGAGTATGACAGGCTGCAGGAGCTGGATCAGAGCCTGAGTGGGGAAACTCCCCAGACCCAACA
GGCCCAGGAAATGCTCAACAATAATATTGAATCTGAGAGACCAGGTCCTTCCCATCAGCCTACC
CCACACAGCAGTGAGAACAACTCCAACCTTTCTCGGGGCCACCTTAATCGATGCCGTGCTTGCC
ATAATCTTCTAACCTTCAACAATGATACCCTTCGTTGGGAAAGAACCACACCTAACTACTCATC
CGGTGAGGCTAGCTCTTCCTGGCATGTCTCCACTACTTTTGAGGGCATGCCACCGAGTGGCAAC
CAACTACCACCTCTTGAGCGGACTGAGGGCCAAATGCCTAACTCCAGCAGGCTGGAGTTGAGCA
GTTCTGCTAGTTCACAAGAGGAGAGGACTGTGGGGGTGGCCTTTAACCAGGAGACCGGCCATTG
GGAACGAATTTATACCCAGTCCAGCAGATCTGGAACTGTATCACAGGAGGCCTTACATCAAGAT
ATGCCTGAGGAAAGCTCTGAGGAAGACTCCCTGAGGAGATTATCTCCTGCTGCATACTACGCCC
AGAGGATGATCCAGTATCTCTCAAGGAGAGACAGTATTCGCCAGCGCTCCATGCGCTACCAACA
GAATCGGCTTCGTTCTTCCACCTCCTCTTCTTCCTCAGACAACCAGGGTCCATCAGTAGAGGGA
ACCGACTTGGAATTTGAGGACTTTGAGGACAATGGTGACAGATCTAGGCACCGAGCTCCCCGAA
ATGCCCGAATGTCTGCACCATCACTTGGACGCTTTGTCCCAAGGCGTTTTTTGCTGCCTGAGTA
CTTGCCTTATGCTGGGATTTTTCATGAGCGTGGACAGCCTGGCTTGGCTACTCATTCTTCTGTT
AACAGGGTCCTGGCAGGGGCAGTAATTGGAGATGGACAGTCTGCTGTGGCCAGTAACATTGCCA
ATACTACCTACAGGCTCCAGTGGTGGGACTTCACCAAGTTTGACCTTCCAGAAATCAGTAATGC
CTCCGTGAATGTCCTGGTACAGAACTGCAAGATCTACAATGATGCCAGCTGTGACATTTCTGCA
GATGGCCAGCTCCTGGCAGCTTTCATCCCGAGTAGCCAGAGGGGCTTTCCTGATGAAGGCATCC
TGGCAGTGTATTCCCTGGCCCCCCATAACTTGGGGGAAATGCTCTACACCAAGCGATTTGGTCC
CAATGCCATTTCTGTAAGCCTGTCCCCAATGGGCCGATACGTTATGGTGGGCTTGGCCTCACGA
AGGATCCTGCTGCACCCCTCTACAGAGCACATGGTAGCCCAGGTCTTCAGGCTGCAGCAGGCCC
ATGGTGGTGAGACTTCCATGAGGAGAGTTTTCAACGTCCTTTACCCCATGCCTGCGGACCAGCG
GAGACACGTCAGCATCAACTCTGCCCGCTGGCTACCTGAGCCAGGGCTCGGTTTGGCCTATGGC
ACCAACAAAGGAGACCTGGTGATCTGCCGACCAGAGGCCTTAAACTCTGGCATTGAGTACTACT
GGGACCAGCTAAATGAAACGGTCTTCACTGTCCACTCAAGTAGCAGGAGCAGCGAGCGGCCTGG
AACCAGCAGAGCCACATGGCGGACAGACAGAGACATGGGCTTGATGAATGCAATTGGGCTGCAA
CCTCGGAACCCTACCACCTCTGTGACATCTCAGGGCACCCAGACTCTGGCCCTCCAGTTGCAGA
ATGCTGAAACACAGACTGAGAGGGAGGAAGAGGAACCAGGGACAGCATCCTCAGGTCCTGGTGA
AGGCGAGGGCTCGGAATATGGTGGCAGTGGGGAAGATGCCCTCAGCCGGATCCAGAGGCTAATG
GCCGAGGGTGGCATGACAGCTGTGGTACAGCGAGAACAGAGTACCACCATGGCCTCCATGGGTG
GCTTCGGCAACAACATCATCGTTAGCCACCGCATTCACCGCAGCTCCCAGACAGGCACAGAGTC
AGGGGCTGCTCGTACCTCCTCACCCCAGCCCTCCACCTCTCGAGGACTACTCTCAGAACCTGGG
CAACTGGCAGAGCGAGGACTAAGCCCCCGGACAGCCTCCTGGGACCAGCCTAGTACCTCTGGAA
GGGAACTACCCCAGCCAGCCCTGTCCTCTTCCTCCCCTGTCCCCATTCCAGTCCCCCTTGCCAG
CAATGAGGGACCAACCATGCACTGCAATGTGACCAATAACAGTCACCTTCCTGAGGGTGATAGT
AGCAATGTGGGGGAAGCTGCAGGCCCTAGTGGGGAGCCACGGAACCGATAGAGACAAAACCAGG
TACTGGTACCTCCCTCAAGCTGCTGAGCAGGAGCAGGACCTCACGGCTGGCTGGGAACTGGACA
CAGAAGAGCTGATGCTTGCATCCAGGAACAGGAGCAATGAGAGGGTGGGGCAGTGGGTAAGGGG
CAGTCCAACTGGCAAGGCTGGCCTGGGATACTAGAGCCTTCCATGATCTAGAGCCCAGAAGAGC
CTCACTGCTGAACCTGGTGTGAATGAAGAAGCAAGTGGGTATCTCTGCTATGAGCCCCATTTCT
CCTAGGATCACTGACCTAGGGGACTCAACCCTGGGCATGAGCCCCAGAAGAGCGAAGTCTTCCA
GAGCTAGACCACACCATCCTGGACAGAATGGTGGGACAGTTCTTCTCCGCCCACTACTGGAGGG
AAGAGCCACCAGGAGCAGAGGAGCAGCGCCCCCCCCCCCCCAATTGCTTCCATCTTTAAAACTT
CCAGAGTTCCAGCCTCTCACATCCTCTTAGCCCACAGAGACGGAAAGGTCAAGCCCAGCTTCCA
TGCCAGTGACTTGTTACACTCACGAGTGCGACACCTGTGGAGTGAAGGAGATAGCCTACTTGAC
TGACACAGGATGGAGTCGATACACGGTGGTGGACAGGTCCTCAGGAGTGGGGGGGGTGTAGGCT
GGCCCGCCCCCAGCATGTCCACCAAGCTCCCCCCTTCCACAAGACCCTCCGTGCAGCACCTATG
GGTGTCAGTATTACCTAAGCATAGGCCAAAGCCAGCCCAAGGTTGGAGGGAGGAGATTCCAGGT
CAGAATGTGAGGTCTTGGTCTGTGACTTGAGGTGTTGCATGTGGAATCCTGAACTGTACGTGTA
GTTTTTAGTGGAGAAATCAAGGCTCTGATCATTTTGTTTTTAGTATGAAAATGTGATTTCCTTT
CTGTTTGTCACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGACAGTCTACTGCTAATGAG
GGAGACACCAAAGATCTACATCATTAAAATGATGACATGCCCCTCA

hide sequence

RefSeq Acc Id:

XM_008762032 ⟹ XP_008760254

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,156,732 - 98,345,873 (+)	NCBI
mRatBN7.2	3	77,701,048 - 77,890,218 (+)	NCBI
Rnor_6.0	3	80,634,632 - 80,830,065 (+)	NCBI

Sequence:

show sequence

CGCTTCCTTCAGCCTCTCCCCGCCTTCCGTCCGTGGCTCCGTGCGCTCGTTGGCCTTCCGGCCA
AGCTCTCACTCGCCTCGCAGATTTCCATGAGGACAGCTGACAAGGACCTGAATGGCCTCATTTT
AGCTACTTCTGTCTGTGGAGCTATTTCTTGCTCCTTCAGTTCTGATCCCTGGTGCGACAGTGGC
TCCTGAGCACCATGAAAGTTGTCCCAGAGAAGAATGCTGTACGAATCCTCTGGGGCCGAGAGCG
GGGCACTCGTGCCATGGGTGCCCAGCGGCTTCTGCAGGAGCTGGTGGAGGATAAGACTCGATGG
ATGAAATGGGAGGGCAAGAGAGTAGAACTTCCTGATAGTCCCACGCTCGACTTCTTACTGGCCT
TCAGCCCAGACAGGACTCTCTTGGCGTCCACACATGTGAACCATAACATCTATATTACAGAGGT
TAAGACTGGCAAGTGTGTTCACTCTCTGATTGGACACCGCCGTACTCCATGGTGTGTCACTTTT
CATCCCACTATCTCAGGCCTTATTGCTTCTGGCTGCCTAGATGGGGAAGTTAGGATTTGGGACT
TACATGGTGGCAGTGAAAGCTGGTTCACAGATAGCAACAATGCCATAGCTTCTTTGGCTTTCCA
CCCTACGGCTCAGCTCCTGCTGATCGCCACTGCAAATGAGATCCATTTCTGGGATTGGAGTCGT
CGGGAACCCTTTGCTGTGGTGAAAACAGCTAGTGAGATGGAGCGTGTTCGTCTGGTGAGATTTG
ATCCACTTGGACACTACTTACTTACAGCTATTGTTAACCCCTCTAATCAGCAGGGTGATGATGA
ACCAGAAATCCCTATAGATGGAACAGAATTATCTCATTACCGTCAGCGTGCCCTCCTGCAATCA
CAGCCAGTTCGCCGGACACCCCTCCTCCACAATTTCCTGCATATGCTGTCCTCCCGCTCCTCTG
GCATCCAGGTGGGAGAGCAAAGCACAGTACAAGATTCTGCTACCCCCTCACCCCCACCGCCTCC
CCCTCAGCCCTCCACGGAGCGTCCCAGGACTTCCGCTTACATCAGACTCCGACAGCGGGTCAGT
TACCCCACCACAGTTGAGTGCTGCCAGCACCCTGGGATCCTGTGCCTTTGCAGCCGTTGTGCTG
GCACTCGAGTTCCTTCCCTCTTGCCACACCAGGACAGTGTCCCCCCTGCTTCTGCCAGAGCTAC
TACCCCTTCCTTTTCTTTTGTACAGACCGAGCCCTTCCATCCCCCGGAGCAGGCTTCATCAACG
CAGCAGGACCAAGGCCTCCTGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCAGCACTGCGG
GCAACACGCTCCGCAACCTCAGTCTGGGTCCTACCCGTCGCTCTTTGGGGGGCCCACTGTCCAG
CCACCCATCTAGGTATCACAGAGAACTAGCCCCTGGGCTGACAGGTTCTGAGTGGACCCGGACA
GTACTCACTCTGAACTCACGTTCTGAGGTAGAATCTATGCCCCCACCGAGGACCAGTGCCTCCT
CAGTGAGTTTGCTTTCTGTACTGAGACAGCAGGAAGGTGGCTCTCAGGCATCTGTGTATACTTC
AGCCACAGAAGGGAGGGGTTTTCCATCATCAGGGTTGGCAACTGAGTCAGATGGAGGGAATGGT
TCCAGCCAAAACAACTCAGGCAACATTCGCCATGAGCTTCAGTGTGACCTGAGACGCTTTTTTT
TGGAGTATGACAGGCTGCAGGAGCTGGATCAGAGCCTGAGTGGGGAAACTCCCCAGACCCAACA
GGCCCAGGAAATGCTCAACAATAATATTGAATCTGAGAGACCAGGTCCTTCCCATCAGCCTACC
CCACACAGCAGTGAGAACAACTCCAACCTTTCTCGGGGCCACCTTAATCGATGCCGTGCTTGCC
ATAATCTTCTAACCTTCAACAATGATACCCTTCGTTGGGAAAGAACCACACCTAACTACTCATC
CGGTGAGGCTAGCTCTTCCTGGCATGTCTCCACTACTTTTGAGGGCATGCCACCGAGTGGCAAC
CAACTACCACCTCTTGAGCGGACTGAGGGCCAAATGCCTAACTCCAGCAGGCTGGAGTTGAGCA
GTTCTGCTAGTTCACAAGAGGAGAGGACTGTGGGGGTGGCCTTTAACCAGGAGACCGGCCATTG
GGAACGAATTTATACCCAGTCCAGCAGATCTGGAACTGTATCACAGGAGGCCTTACATCAAGAT
ATGCCTGAGGAAAGCTCTGAGGAAGACTCCCTGAGGAGGAGGCTGCTGGAGTCTTCCCTCATTT
CATTATCCCGTTATGATGGAGCAGGATCCAGAGAGCACCCAATTTACCCAGACCCAGCGAGGGA
CAATGGTGACAGATCTAGGCACCGAGCTCCCCGAAATGCCCGAATGTCTGCACCATCACTTGGA
CGCTTTGTCCCAAGGCGTTTTTTGCTGCCTGAGTACTTGCCTTATGCTGGGATTTTTCATGAGC
GTGGACAGCCTGGCTTGGCTACTCATTCTTCTGTTAACAGGGTCCTGGCAGGGGCAGTAATTGG
AGATGGACAGTCTGCTGTGGCCAGTAACATTGCCAATACTACCTACAGGCTCCAGTGGTGGGAC
TTCACCAAGTTTGACCTTCCAGAAATCAGTAATGCCTCCGTGAATGTCCTGGTACAGAACTGCA
AGATCTACAATGATGCCAGCTGTGACATTTCTGCAGATGGCCAGCTCCTGGCAGCTTTCATCCC
GAGTAGCCAGAGGGGCTTTCCTGATGAAGGCATCCTGGCAGTGTATTCCCTGGCCCCCCATAAC
TTGGGGGAAATGCTCTACACCAAGCGATTTGGTCCCAATGCCATTTCTGTAAGCCTGTCCCCAA
TGGGCCGATACGTTATGGTGGGCTTGGCCTCACGAAGGATCCTGCTGCACCCCTCTACAGAGCA
CATGGTAGCCCAGGTCTTCAGGCTGCAGCAGGCCCATGGTGGTGAGACTTCCATGAGGAGAGTT
TTCAACGTCCTTTACCCCATGCCTGCGGACCAGCGGAGACACGTCAGCATCAACTCTGCCCGCT
GGCTACCTGAGCCAGGGCTCGGTTTGGCCTATGGCACCAACAAAGGAGACCTGGTGATCTGCCG
ACCAGAGGCCTTAAACTCTGGCATTGAGTACTACTGGGACCAGCTAAATGAAACGGTCTTCACT
GTCCACTCAAGTAGCAGGAGCAGCGAGCGGCCTGGAACCAGCAGAGCCACATGGCGGACAGACA
GAGACATGGGCTTGATGAATGCAATTGGGCTGCAACCTCGGAACCCTACCACCTCTGTGACATC
TCAGGGCACCCAGACTCTGGCCCTCCAGTTGCAGAATGCTGAAACACAGACTGAGAGGGAGGAA
GAGGAACCAGGGACAGCATCCTCAGGTCCTGGTGAAGGCGAGGGCTCGGAATATGGTGGCAGTG
GGGAAGATGCCCTCAGCCGGATCCAGAGGCTAATGGCCGAGGGTGGCATGACAGCTGTGGTACA
GCGAGAACAGAGTACCACCATGGCCTCCATGGGTGGCTTCGGCAACAACATCATCGTTAGCCAC
CGCATTCACCGCAGCTCCCAGACAGGCACAGAGTCAGGGGCTGCTCGTACCTCCTCACCCCAGC
CCTCCACCTCTCGAGGACTACTCTCAGAACCTGGGCAACTGGCAGAGCGAGGACTAAGCCCCCG
GACAGCCTCCTGGGACCAGCCTAGTACCTCTGGAAGGGAACTACCCCAGCCAGCCCTGTCCTCT
TCCTCCCCTGTCCCCATTCCAGTCCCCCTTGCCAGCAATGAGGGACCAACCATGCACTGCAATG
TGACCAATAACAGTCACCTTCCTGAGGGTGATAGTAGCAATGTGGGGGAAGCTGCAGGCCCTAG
TGGGGAGCCACGGAACCGATAGAGACAAAACCAGGTACTGGTACCTCCCTCAAGCTGCTGAGCA
GGAGCAGGACCTCACGGCTGGCTGGGAACTGGACACAGAAGAGCTGATGCTTGCATCCAGGAAC
AGGAGCAATGAGAGGGTGGGGCAGTGGGTAAGGGGCAGTCCAACTGGCAAGGCTGGCCTGGGAT
ACTAGAGCCTTCCATGATCTAGAGCCCAGAAGAGCCTCACTGCTGAACCTGGTGTGAATGAAGA
AGCAAGTGGGTATCTCTGCTATGAGCCCCATTTCTCCTAGGATCACTGACCTAGGGGACTCAAC
CCTGGGCATGAGCCCCAGAAGAGCGAAGTCTTCCAGAGCTAGACCACACCATCCTGGACAGAAT
GGTGGGACAGTTCTTCTCCGCCCACTACTGGAGGGAAGAGCCACCAGGAGCAGAGGAGCAGCGC
CCCCCCCCCCCCAATTGCTTCCATCTTTAAAACTTCCAGAGTTCCAGCCTCTCACATCCTCTTA
GCCCACAGAGACGGAAAGGTCAAGCCCAGCTTCCATGCCAGTGACTTGTTACACTCACGAGTGC
GACACCTGTGGAGTGAAGGAGATAGCCTACTTGACTGACACAGGATGGAGTCGATACACGGTGG
TGGACAGGTCCTCAGGAGTGGGGGGGGTGTAGGCTGGCCCGCCCCCAGCATGTCCACCAAGCTC
CCCCCTTCCACAAGACCCTCCGTGCAGCACCTATGGGTGTCAGTATTACCTAAGCATAGGCCAA
AGCCAGCCCAAGGTTGGAGGGAGGAGATTCCAGGTCAGAATGTGAGGTCTTGGTCTGTGACTTG
AGGTGTTGCATGTGGAATCCTGAACTGTACGTGTAGTTTTTAGTGGAGAAATCAAGGCTCTGAT
CATTTTGTTTTTAGTATGAAAATGTGATTTCCTTTCTGTTTGTCACTCATCATAGAAACATTGT
GGTGGGAGGAGAGGGGACAGTCTACTGCTAATGAGGGAGACACCAAAGATCTACATCATTAAAA
TGATGACATGCCCCTCA

hide sequence

RefSeq Acc Id:

XM_008762033 ⟹ XP_008760255

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,156,732 - 98,345,873 (+)	NCBI
mRatBN7.2	3	77,701,048 - 77,890,218 (+)	NCBI
Rnor_6.0	3	80,634,632 - 80,830,065 (+)	NCBI

Sequence:

show sequence

CGCTTCCTTCAGCCTCTCCCCGCCTTCCGTCCGTGGCTCCGTGCGCTCGTTGGCCTTCCGGCCA
AGCTCTCACTCGCCTCGCAGATTTCCATGAGGACAGCTGACAAGGACCTGAATGGCCTCATTTT
AGCTACTTCTGTCTGTGGAGCTATTTCTTGCTCCTTCAGTTCTGATCCCTGGTGCGACAGTGGC
TCCTGAGCACCATGAAAGTTGTCCCAGAGAAGAATGCTGTACGAATCCTCTGGGGCCGAGAGCG
GGGCACTCGTGCCATGGGTGCCCAGCGGCTTCTGCAGGAGCTGGTGGAGGATAAGACTCGATGG
ATGAAATGGGAGGGCAAGAGAGTAGAACTTCCTGATAGTCCCACGCTCGACTTCTTACTGGCCT
TCAGCCCAGACAGGACTCTCTTGGCGTCCACACATGTGAACCATAACATCTATATTACAGAGGT
TAAGACTGGCAAGTGTGTTCACTCTCTGATTGGACACCGCCGTACTCCATGGTGTGTCACTTTT
CATCCCACTATCTCAGGCCTTATTGCTTCTGGCTGCCTAGATGGGGAAGTTAGGATTTGGGACT
TACATGGTGGCAGTGAAAGCTGGTTCACAGATAGCAACAATGCCATAGCTTCTTTGGCTTTCCA
CCCTACGGCTCAGCTCCTGCTGATCGCCACTGCAAATGAGATCCATTTCTGGGATTGGAGTCGT
CGGGAACCCTTTGCTGTGGTGAAAACAGCTAGTGAGATGGAGCGTGTTCGTCTGGTGAGATTTG
ATCCACTTGGACACTACTTACTTACAGCTATTGTTAACCCCTCTAATCAGCAGGGTGATGATGA
ACCAGAAATCCCTATAGATGGAACAGAATTATCTCATTACCGTCAGCGTGCCCTCCTGCAATCA
CAGCCAGTTCGCCGGACACCCCTCCTCCACAATTTCCTGCATATGCTGTCCTCCCGCTCCTCTG
GCATCCAGACCGAGCCCTTCCATCCCCCGGAGCAGGCTTCATCAACGCAGCAGGACCAAGGCCT
CCTGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCAGCACTGCGGGCAACACGCTCCGCAAC
CTCAGTCTGGGTCCTACCCGTCGCTCTTTGGGGGGCCCACTGTCCAGCCACCCATCTAGGTATC
ACAGAGAACTAGCCCCTGGGCTGACAGGTTCTGAGTGGACCCGGACAGTACTCACTCTGAACTC
ACGTTCTGAGGTAGAATCTATGCCCCCACCGAGGACCAGTGCCTCCTCAGTGAGTTTGCTTTCT
GTACTGAGACAGCAGGAAGGTGGCTCTCAGGCATCTGTGTATACTTCAGCCACAGAAGGGAGGG
GTTTTCCATCATCAGGGTTGGCAACTGAGTCAGATGGAGGGAATGGTTCCAGCCAAAACAACTC
AGGCAACATTCGCCATGAGCTTCAGTGTGACCTGAGACGCTTTTTTTTGGAGTATGACAGGCTG
CAGGAGCTGGATCAGAGCCTGAGTGGGGAAACTCCCCAGACCCAACAGGCCCAGGAAATGCTCA
ACAATAATATTGAATCTGAGAGACCAGGTCCTTCCCATCAGCCTACCCCACACAGCAGTGAGAA
CAACTCCAACCTTTCTCGGGGCCACCTTAATCGATGCCGTGCTTGCCATAATCTTCTAACCTTC
AACAATGATACCCTTCGTTGGGAAAGAACCACACCTAACTACTCATCCGGTGAGGCTAGCTCTT
CCTGGCATGTCTCCACTACTTTTGAGGGCATGCCACCGAGTGGCAACCAACTACCACCTCTTGA
GCGGACTGAGGGCCAAATGCCTAACTCCAGCAGGCTGGAGTTGAGCAGTTCTGCTAGTTCACAA
GAGGAGAGGACTGTGGGGGTGGCCTTTAACCAGGAGACCGGCCATTGGGAACGAATTTATACCC
AGTCCAGCAGATCTGGAACTGTATCACAGGAGGCCTTACATCAAGATATGCCTGAGGAAAGCTC
TGAGGAAGACTCCCTGAGGAGGAGGCTGCTGGAGTCTTCCCTCATTTCATTATCCCGTTATGAT
GGAGCAGGATCCAGAGAGCACCCAATTTACCCAGACCCAGCGAGATTATCTCCTGCTGCATACT
ACGCCCAGAGGATGATCCAGTATCTCTCAAGGAGAGACAGTATTCGCCAGCGCTCCATGCGCTA
CCAACAGAATCGGCTTCGTTCTTCCACCTCCTCTTCTTCCTCAGACAACCAGGGTCCATCAGTA
GAGGGAACCGACTTGGAATTTGAGGACTTTGAGGACAATGGTGACAGATCTAGGCACCGAGCTC
CCCGAAATGCCCGAATGTCTGCACCATCACTTGGACGCTTTGTCCCAAGGCGTTTTTTGCTGCC
TGAGTACTTGCCTTATGCTGGGATTTTTCATGAGCGTGGACAGCCTGGCTTGGCTACTCATTCT
TCTGTTAACAGGGTCCTGGCAGGGGCAGTAATTGGAGATGGACAGTCTGCTGTGGCCAGTAACA
TTGCCAATACTACCTACAGGCTCCAGTGGTGGGACTTCACCAAGTTTGACCTTCCAGAAATCAG
TAATGCCTCCGTGAATGTCCTGGTACAGAACTGCAAGATCTACAATGATGCCAGCTGTGACATT
TCTGCAGATGGCCAGCTCCTGGCAGCTTTCATCCCGAGTAGCCAGAGGGGCTTTCCTGATGAAG
GCATCCTGGCAGTGTATTCCCTGGCCCCCCATAACTTGGGGGAAATGCTCTACACCAAGCGATT
TGGTCCCAATGCCATTTCTGTAAGCCTGTCCCCAATGGGCCGATACGTTATGGTGGGCTTGGCC
TCACGAAGGATCCTGCTGCACCCCTCTACAGAGCACATGGTAGCCCAGGTCTTCAGGCTGCAGC
AGGCCCATGGTGGTGAGACTTCCATGAGGAGAGTTTTCAACGTCCTTTACCCCATGCCTGCGGA
CCAGCGGAGACACGTCAGCATCAACTCTGCCCGCTGGCTACCTGAGCCAGGGCTCGGTTTGGCC
TATGGCACCAACAAAGGAGACCTGGTGATCTGCCGACCAGAGGCCTTAAACTCTGGCATTGAGT
ACTACTGGGACCAGCTAAATGAAACGGTCTTCACTGTCCACTCAAGTAGCAGGAGCAGCGAGCG
GCCTGGAACCAGCAGAGCCACATGGCGGACAGACAGAGACATGGGCTTGATGAATGCAATTGGG
CTGCAACCTCGGAACCCTACCACCTCTGTGACATCTCAGGGCACCCAGACTCTGGCCCTCCAGT
TGCAGAATGCTGAAACACAGACTGAGAGGGAGGAAGAGGAACCAGGGACAGCATCCTCAGGTCC
TGGTGAAGGCGAGGGCTCGGAATATGGTGGCAGTGGGGAAGATGCCCTCAGCCGGATCCAGAGG
CTAATGGCCGAGGGTGGCATGACAGCTGTGGTACAGCGAGAACAGAGTACCACCATGGCCTCCA
TGGGTGGCTTCGGCAACAACATCATCGTTAGCCACCGCATTCACCGCAGCTCCCAGACAGGCAC
AGAGTCAGGGGCTGCTCGTACCTCCTCACCCCAGCCCTCCACCTCTCGAGGACTACTCTCAGAA
CCTGGGCAACTGGCAGAGCGAGGACTAAGCCCCCGGACAGCCTCCTGGGACCAGCCTAGTACCT
CTGGAAGGGAACTACCCCAGCCAGCCCTGTCCTCTTCCTCCCCTGTCCCCATTCCAGTCCCCCT
TGCCAGCAATGAGGGACCAACCATGCACTGCAATGTGACCAATAACAGTCACCTTCCTGAGGGT
GATAGTAGCAATGTGGGGGAAGCTGCAGGCCCTAGTGGGGAGCCACGGAACCGATAGAGACAAA
ACCAGGTACTGGTACCTCCCTCAAGCTGCTGAGCAGGAGCAGGACCTCACGGCTGGCTGGGAAC
TGGACACAGAAGAGCTGATGCTTGCATCCAGGAACAGGAGCAATGAGAGGGTGGGGCAGTGGGT
AAGGGGCAGTCCAACTGGCAAGGCTGGCCTGGGATACTAGAGCCTTCCATGATCTAGAGCCCAG
AAGAGCCTCACTGCTGAACCTGGTGTGAATGAAGAAGCAAGTGGGTATCTCTGCTATGAGCCCC
ATTTCTCCTAGGATCACTGACCTAGGGGACTCAACCCTGGGCATGAGCCCCAGAAGAGCGAAGT
CTTCCAGAGCTAGACCACACCATCCTGGACAGAATGGTGGGACAGTTCTTCTCCGCCCACTACT
GGAGGGAAGAGCCACCAGGAGCAGAGGAGCAGCGCCCCCCCCCCCCCAATTGCTTCCATCTTTA
AAACTTCCAGAGTTCCAGCCTCTCACATCCTCTTAGCCCACAGAGACGGAAAGGTCAAGCCCAG
CTTCCATGCCAGTGACTTGTTACACTCACGAGTGCGACACCTGTGGAGTGAAGGAGATAGCCTA
CTTGACTGACACAGGATGGAGTCGATACACGGTGGTGGACAGGTCCTCAGGAGTGGGGGGGGTG
TAGGCTGGCCCGCCCCCAGCATGTCCACCAAGCTCCCCCCTTCCACAAGACCCTCCGTGCAGCA
CCTATGGGTGTCAGTATTACCTAAGCATAGGCCAAAGCCAGCCCAAGGTTGGAGGGAGGAGATT
CCAGGTCAGAATGTGAGGTCTTGGTCTGTGACTTGAGGTGTTGCATGTGGAATCCTGAACTGTA
CGTGTAGTTTTTAGTGGAGAAATCAAGGCTCTGATCATTTTGTTTTTAGTATGAAAATGTGATT
TCCTTTCTGTTTGTCACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGACAGTCTACTGCT
AATGAGGGAGACACCAAAGATCTACATCATTAAAATGATGACATGCCCCTCA

hide sequence

RefSeq Acc Id:

XM_008762034 ⟹ XP_008760256

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,156,732 - 98,345,873 (+)	NCBI
mRatBN7.2	3	77,701,048 - 77,890,218 (+)	NCBI
Rnor_6.0	3	80,634,632 - 80,830,065 (+)	NCBI

Sequence:

show sequence

CGCTTCCTTCAGCCTCTCCCCGCCTTCCGTCCGTGGCTCCGTGCGCTCGTTGGCCTTCCGGCCA
AGCTCTCACTCGCCTCGCAGATTTCCATGAGGACAGCTGACAAGGACCTGAATGGCCTCATTTT
AGCTACTTCTGTCTGTGGAGCTATTTCTTGCTCCTTCAGTTCTGATCCCTGGTGCGACAGTGGC
TCCTGAGCACCATGAAAGTTGTCCCAGAGAAGAATGCTGTACGAATCCTCTGGGGCCGAGAGCG
GGGCACTCGTGCCATGGGTGCCCAGCGGCTTCTGCAGGAGCTGGTGGAGGATAAGACTCGATGG
ATGAAATGGGAGGGCAAGAGAGTAGAACTTCCTGATAGTCCCACGCTCGACTTCTTACTGGCCT
TCAGCCCAGACAGGACTCTCTTGGCGTCCACACATGTGAACCATAACATCTATATTACAGAGGT
TAAGACTGGCAAGTGTGTTCACTCTCTGATTGGACACCGCCGTACTCCATGGTGTGTCACTTTT
CATCCCACTATCTCAGGCCTTATTGCTTCTGGCTGCCTAGATGGGGAAGTTAGGATTTGGGACT
TACATGGTGGCAGTGAAAGCTGGTTCACAGATAGCAACAATGCCATAGCTTCTTTGGCTTTCCA
CCCTACGGCTCAGCTCCTGCTGATCGCCACTGCAAATGAGATCCATTTCTGGGATTGGAGTCGT
CGGGAACCCTTTGCTGTGGTGAAAACAGCTAGTGAGATGGAGCGTGTTCGTCTGGTGAGATTTG
ATCCACTTGGACACTACTTACTTACAGCTATTGTTAACCCCTCTAATCAGCAGGGTGATGATGA
ACCAGAAATCCCTATAGATGGAACAGAATTATCTCATTACCGTCAGCGTGCCCTCCTGCAATCA
CAGCCAGTTCGCCGGACACCCCTCCTCCACAATTTCCTGCATATGCTGTCCTCCCGCTCCTCTG
GCATCCAGACCGAGCCCTTCCATCCCCCGGAGCAGGCTTCATCAACGCAGCAGGACCAAGGCCT
CCTGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCAGCACTGCGGGCAACACGCTCCGCAAC
CTCAGTCTGGGTCCTACCCGTCGCTCTTTGGGGGGCCCACTGTCCAGCCACCCATCTAGGTATC
ACAGAGAACTAGCCCCTGGGCTGACAGGTTCTGAGTGGACCCGGACAGTACTCACTCTGAACTC
ACGTTCTGAGGTAGAATCTATGCCCCCACCGAGGACCAGTGCCTCCTCAGTGAGTTTGCTTTCT
GTACTGAGACAGCAGGAAGGTGGCTCTCAGGCATCTGTGTATACTTCAGCCACAGAAGGGAGGG
GTTTTCCATCATCAGGGTTGGCAACTGAGTCAGATGGAGGGAATGGTTCCAGCCAAAACAACTC
AGGCAACATTCGCCATGAGCTTCAGTGTGACCTGAGACGCTTTTTTTTGGAGTATGACAGGCTG
CAGGAGCTGGATCAGAGCCTGAGTGGGGAAACTCCCCAGACCCAACAGGCCCAGGAAATGCTCA
ACAATAATATTGAATCTGAGAGACCAGGTCCTTCCCATCAGCCTACCCCACACAGCAGTGAGAA
CAACTCCAACCTTTCTCGGGGCCACCTTAATCGATGCCGTGCTTGCCATAATCTTCTAACCTTC
AACAATGATACCCTTCGTTGGGAAAGAACCACACCTAACTACTCATCCGGTGAGGCTAGCTCTT
CCTGGCATGTCTCCACTACTTTTGAGGGCATGCCACCGAGTGGCAACCAACTACCACCTCTTGA
GCGGACTGAGGGCCAAATGCCTAACTCCAGCAGGCTGGAGTTGAGCAGTTCTGCTAGTTCACAA
GAGGAGAGGACTGTGGGGGTGGCCTTTAACCAGGAGACCGGCCATTGGGAACGAATTTATACCC
AGTCCAGCAGATCTGGAACTGTATCACAGGAGGCCTTACATCAAGATATGCCTGAGGAAAGCTC
TGAGGAAGACTCCCTGAGGAGATTATCTCCTGCTGCATACTACGCCCAGAGGATGATCCAGTAT
CTCTCAAGGAGAGACAGTATTCGCCAGCGCTCCATGCGCTACCAACAGAATCGGCTTCGTTCTT
CCACCTCCTCTTCTTCCTCAGACAACCAGGGTCCATCAGTAGAGGGAACCGACTTGGAATTTGA
GGACTTTGAGGACAATGGTGACAGATCTAGGCACCGAGCTCCCCGAAATGCCCGAATGTCTGCA
CCATCACTTGGACGCTTTGTCCCAAGGCGTTTTTTGCTGCCTGAGTACTTGCCTTATGCTGGGA
TTTTTCATGAGCGTGGACAGCCTGGCTTGGCTACTCATTCTTCTGTTAACAGGGTCCTGGCAGG
GGCAGTAATTGGAGATGGACAGTCTGCTGTGGCCAGTAACATTGCCAATACTACCTACAGGCTC
CAGTGGTGGGACTTCACCAAGTTTGACCTTCCAGAAATCAGTAATGCCTCCGTGAATGTCCTGG
TACAGAACTGCAAGATCTACAATGATGCCAGCTGTGACATTTCTGCAGATGGCCAGCTCCTGGC
AGCTTTCATCCCGAGTAGCCAGAGGGGCTTTCCTGATGAAGGCATCCTGGCAGTGTATTCCCTG
GCCCCCCATAACTTGGGGGAAATGCTCTACACCAAGCGATTTGGTCCCAATGCCATTTCTGTAA
GCCTGTCCCCAATGGGCCGATACGTTATGGTGGGCTTGGCCTCACGAAGGATCCTGCTGCACCC
CTCTACAGAGCACATGGTAGCCCAGGTCTTCAGGCTGCAGCAGGCCCATGGTGGTGAGACTTCC
ATGAGGAGAGTTTTCAACGTCCTTTACCCCATGCCTGCGGACCAGCGGAGACACGTCAGCATCA
ACTCTGCCCGCTGGCTACCTGAGCCAGGGCTCGGTTTGGCCTATGGCACCAACAAAGGAGACCT
GGTGATCTGCCGACCAGAGGCCTTAAACTCTGGCATTGAGTACTACTGGGACCAGCTAAATGAA
ACGGTCTTCACTGTCCACTCAAGTAGCAGGAGCAGCGAGCGGCCTGGAACCAGCAGAGCCACAT
GGCGGACAGACAGAGACATGGGCTTGATGAATGCAATTGGGCTGCAACCTCGGAACCCTACCAC
CTCTGTGACATCTCAGGGCACCCAGACTCTGGCCCTCCAGTTGCAGAATGCTGAAACACAGACT
GAGAGGGAGGAAGAGGAACCAGGGACAGCATCCTCAGGTCCTGGTGAAGGCGAGGGCTCGGAAT
ATGGTGGCAGTGGGGAAGATGCCCTCAGCCGGATCCAGAGGCTAATGGCCGAGGGTGGCATGAC
AGCTGTGGTACAGCGAGAACAGAGTACCACCATGGCCTCCATGGGTGGCTTCGGCAACAACATC
ATCGTTAGCCACCGCATTCACCGCAGCTCCCAGACAGGCACAGAGTCAGGGGCTGCTCGTACCT
CCTCACCCCAGCCCTCCACCTCTCGAGGACTACTCTCAGAACCTGGGCAACTGGCAGAGCGAGG
ACTAAGCCCCCGGACAGCCTCCTGGGACCAGCCTAGTACCTCTGGAAGGGAACTACCCCAGCCA
GCCCTGTCCTCTTCCTCCCCTGTCCCCATTCCAGTCCCCCTTGCCAGCAATGAGGGACCAACCA
TGCACTGCAATGTGACCAATAACAGTCACCTTCCTGAGGGTGATAGTAGCAATGTGGGGGAAGC
TGCAGGCCCTAGTGGGGAGCCACGGAACCGATAGAGACAAAACCAGGTACTGGTACCTCCCTCA
AGCTGCTGAGCAGGAGCAGGACCTCACGGCTGGCTGGGAACTGGACACAGAAGAGCTGATGCTT
GCATCCAGGAACAGGAGCAATGAGAGGGTGGGGCAGTGGGTAAGGGGCAGTCCAACTGGCAAGG
CTGGCCTGGGATACTAGAGCCTTCCATGATCTAGAGCCCAGAAGAGCCTCACTGCTGAACCTGG
TGTGAATGAAGAAGCAAGTGGGTATCTCTGCTATGAGCCCCATTTCTCCTAGGATCACTGACCT
AGGGGACTCAACCCTGGGCATGAGCCCCAGAAGAGCGAAGTCTTCCAGAGCTAGACCACACCAT
CCTGGACAGAATGGTGGGACAGTTCTTCTCCGCCCACTACTGGAGGGAAGAGCCACCAGGAGCA
GAGGAGCAGCGCCCCCCCCCCCCCAATTGCTTCCATCTTTAAAACTTCCAGAGTTCCAGCCTCT
CACATCCTCTTAGCCCACAGAGACGGAAAGGTCAAGCCCAGCTTCCATGCCAGTGACTTGTTAC
ACTCACGAGTGCGACACCTGTGGAGTGAAGGAGATAGCCTACTTGACTGACACAGGATGGAGTC
GATACACGGTGGTGGACAGGTCCTCAGGAGTGGGGGGGGTGTAGGCTGGCCCGCCCCCAGCATG
TCCACCAAGCTCCCCCCTTCCACAAGACCCTCCGTGCAGCACCTATGGGTGTCAGTATTACCTA
AGCATAGGCCAAAGCCAGCCCAAGGTTGGAGGGAGGAGATTCCAGGTCAGAATGTGAGGTCTTG
GTCTGTGACTTGAGGTGTTGCATGTGGAATCCTGAACTGTACGTGTAGTTTTTAGTGGAGAAAT
CAAGGCTCTGATCATTTTGTTTTTAGTATGAAAATGTGATTTCCTTTCTGTTTGTCACTCATCA
TAGAAACATTGTGGTGGGAGGAGAGGGGACAGTCTACTGCTAATGAGGGAGACACCAAAGATCT
ACATCATTAAAATGATGACATGCCCCTCA

hide sequence

RefSeq Acc Id:

XM_039105763 ⟹ XP_038961691

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,156,732 - 98,345,873 (+)	NCBI
mRatBN7.2	3	77,701,048 - 77,890,218 (+)	NCBI

RefSeq Acc Id:

XM_039105764 ⟹ XP_038961692

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,156,732 - 98,345,873 (+)	NCBI
mRatBN7.2	3	77,701,048 - 77,890,218 (+)	NCBI

RefSeq Acc Id:

XM_039105765 ⟹ XP_038961693

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,222,264 - 98,345,873 (+)	NCBI
mRatBN7.2	3	77,771,393 - 77,890,218 (+)	NCBI

RefSeq Acc Id:

XM_063284450 ⟹ XP_063140520

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,157,193 - 98,345,873 (+)	NCBI

RefSeq Acc Id:

XM_063284451 ⟹ XP_063140521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,156,732 - 98,345,873 (+)	NCBI

RefSeq Acc Id:

XM_063284452 ⟹ XP_063140522

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,157,193 - 98,345,873 (+)	NCBI

RefSeq Acc Id:

XM_063284453 ⟹ XP_063140523

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,156,732 - 98,345,873 (+)	NCBI

RefSeq Acc Id:

XM_063284454 ⟹ XP_063140524

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,157,183 - 98,345,873 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001127813	(Get FASTA)	NCBI Sequence Viewer
	XP_008760252	(Get FASTA)	NCBI Sequence Viewer
	XP_008760253	(Get FASTA)	NCBI Sequence Viewer
	XP_008760254	(Get FASTA)	NCBI Sequence Viewer
	XP_008760255	(Get FASTA)	NCBI Sequence Viewer
	XP_008760256	(Get FASTA)	NCBI Sequence Viewer
	XP_038961691	(Get FASTA)	NCBI Sequence Viewer
	XP_038961692	(Get FASTA)	NCBI Sequence Viewer
	XP_038961693	(Get FASTA)	NCBI Sequence Viewer
	XP_063140520	(Get FASTA)	NCBI Sequence Viewer
	XP_063140521	(Get FASTA)	NCBI Sequence Viewer
	XP_063140522	(Get FASTA)	NCBI Sequence Viewer
	XP_063140523	(Get FASTA)	NCBI Sequence Viewer
	XP_063140524	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI00095	(Get FASTA)	NCBI Sequence Viewer
	BAA77717	(Get FASTA)	NCBI Sequence Viewer
	EDL79545	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000039742
	ENSRNOP00000039742.6
	ENSRNOP00000073365
	ENSRNOP00000073365.2
	ENSRNOP00000087603
	ENSRNOP00000087603.1
	ENSRNOP00000091295
	ENSRNOP00000091295.2

RefSeq Acc Id:

NP_001127813 ⟸ NM_001134341

- UniProtKB:

F1LNQ2 (UniProtKB/TrEMBL), A6HNE5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLAFSPD
RTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGG
SESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEMERVRLVRFDPLG
HYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLLHNFLHMLSSRSSGIQV
GEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTTVECCQHPGILCLCSRCAGTRV
PSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQQDQGLLNRPSAFSTVQSSTAGNTL
RNLSLGPTRRSLGGPLSSHPSRYHRELAPGLTGSEWTRTVLTLNSRSEVESMPPPRTSASSVSL
LSVLRQQEGGSQASVYTSATEGRGFPSSGLATESDGGNGSSQNNSGNIRHELQCDLRRFFLEYD
RLQELDQSLSGETPQTQQAQEMLNNNIESERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLL
TFNNDTLRWERTTPNYSSGEASSSWHVSTTFEGMPPSGNQLPPLERTEGQMPNSSRLELSSSAS
SQEERTVGVAFNQETGHWERIYTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSR
YDGAGSREHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGP
SVEGTDLEFEDFEDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLAT
HSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASC
DISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVG
LASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEPGLG
LAYGTNKGDLVICRPEALNSGIEYYWDQLNETVFTVHSSSRSSERPGTSRATWRTDRDMGLMNA
IGLQPRNPTTSVTSQGTQTLALQLQNAETQTEREEEEPGTASSGPGEGEGSEYGGSGEDALSRI
QRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTESGAARTSSPQPSTSRGLL
SEPGQLAERGLSPRTASWDQPSTSGRELPQPALSSSSPVPIPVPLASNEGPTMHCNVTNNSHLP
EGDSSNVGEAAGPSGEPRNR

hide sequence

RefSeq Acc Id:	XP_008760252 ⟸ XM_008762030
- Peptide Label:	isoform X1
- UniProtKB:	F1LNQ2 (UniProtKB/TrEMBL), A6HNE5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPTLDFLLAFSPD RTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGG SESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEMERVRLVRFDPLG HYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLLHNFLHMLSSRSSGIQV GEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTTVECCQHPGILCLCSRCAGTRV PSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQQDQGLLNRPSAFSTVQSSTAGNTL RNLSLGPTRRSLGGPLSSHPSRYHRELAPGLTGSEWTRTVLTLNSRSEVESMPPPRTSASSVSL LSVLRQQEGGSQASVYTSATEGRGFPSSGLATESDGGNGSSQNNSGNIRHELQCDLRRFFLEYD RLQELDQSLSGETPQTQQAQEMLNNNIESERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLL TFNNDTLRWERTTPNYSSGEASSSWHVSTTFEGMPPSGNQLPPLERTEGQMPNSSRLELSSSAS SQEERTVGVAFNQETGHWERIYTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSR YDGAGSREHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGP SVEGTDLEFEDFEDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLAT HSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASC DISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVG LASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEPGLG LAYGTNKGDLVICRPEALNSGIEYYWDQLNETVFTVHSSSRSSERPGTSRATWRTDRDMGLMNA IGLQPRNPTTSVTSQGTQTLALQLQNAETQTEREEEEPGTASSGPGEGEGSEYGGSGEDALSRI QRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTESGAARTSSPQPSTSRGLL SEPGQLAERGLSPRTASWDQPSTSGRELPQPALSSSSPVPIPVPLASNEGPTMHCNVTNNSHLP EGDSSNVGEAAGPSGEPRNR hide sequence

RefSeq Acc Id:	XP_008760254 ⟸ XM_008762032
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AGV8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPTLDFLLAFSPD RTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGG SESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEMERVRLVRFDPLG HYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLLHNFLHMLSSRSSGIQV GEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTTVECCQHPGILCLCSRCAGTRV PSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQQDQGLLNRPSAFSTVQSSTAGNTL RNLSLGPTRRSLGGPLSSHPSRYHRELAPGLTGSEWTRTVLTLNSRSEVESMPPPRTSASSVSL LSVLRQQEGGSQASVYTSATEGRGFPSSGLATESDGGNGSSQNNSGNIRHELQCDLRRFFLEYD RLQELDQSLSGETPQTQQAQEMLNNNIESERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLL TFNNDTLRWERTTPNYSSGEASSSWHVSTTFEGMPPSGNQLPPLERTEGQMPNSSRLELSSSAS SQEERTVGVAFNQETGHWERIYTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSR YDGAGSREHPIYPDPARDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQP GLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYN DASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRY VMVGLASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPE PGLGLAYGTNKGDLVICRPEALNSGIEYYWDQLNETVFTVHSSSRSSERPGTSRATWRTDRDMG LMNAIGLQPRNPTTSVTSQGTQTLALQLQNAETQTEREEEEPGTASSGPGEGEGSEYGGSGEDA LSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTESGAARTSSPQPSTS RGLLSEPGQLAERGLSPRTASWDQPSTSGRELPQPALSSSSPVPIPVPLASNEGPTMHCNVTNN SHLPEGDSSNVGEAAGPSGEPRNR hide sequence

RefSeq Acc Id:

XP_008760253 ⟸ XM_008762031

- Peptide Label:

isoform X2

- Sequence:

show sequence

MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPTLDFLLAFSPD
RTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGG
SESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEMERVRLVRFDPLG
HYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLLHNFLHMLSSRSSGIQV
GEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTTVECCQHPGILCLCSRCAGTRV
PSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQQDQGLLNRPSAFSTVQSSTAGNTL
RNLSLGPTRRSLGGPLSSHPSRYHRELAPGLTGSEWTRTVLTLNSRSEVESMPPPRTSASSVSL
LSVLRQQEGGSQASVYTSATEGRGFPSSGLATESDGGNGSSQNNSGNIRHELQCDLRRFFLEYD
RLQELDQSLSGETPQTQQAQEMLNNNIESERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLL
TFNNDTLRWERTTPNYSSGEASSSWHVSTTFEGMPPSGNQLPPLERTEGQMPNSSRLELSSSAS
SQEERTVGVAFNQETGHWERIYTQSSRSGTVSQEALHQDMPEESSEEDSLRRLSPAAYYAQRMI
QYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGPSVEGTDLEFEDFEDNGDRSRHRAPRNARM
SAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTY
RLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVY
SLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGLASRRILLHPSTEHMVAQVFRLQQAHGGE
TSMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPEALNSGIEYYWDQL
NETVFTVHSSSRSSERPGTSRATWRTDRDMGLMNAIGLQPRNPTTSVTSQGTQTLALQLQNAET
QTEREEEEPGTASSGPGEGEGSEYGGSGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGN
NIIVSHRIHRSSQTGTESGAARTSSPQPSTSRGLLSEPGQLAERGLSPRTASWDQPSTSGRELP
QPALSSSSPVPIPVPLASNEGPTMHCNVTNNSHLPEGDSSNVGEAAGPSGEPRNR

hide sequence

RefSeq Acc Id:	XP_008760255 ⟸ XM_008762033
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K5B6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPTLDFLLAFSPD RTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGG SESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEMERVRLVRFDPLG HYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLLHNFLHMLSSRSSGIQT EPFHPPEQASSTQQDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREL APGLTGSEWTRTVLTLNSRSEVESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPS SGLATESDGGNGSSQNNSGNIRHELQCDLRRFFLEYDRLQELDQSLSGETPQTQQAQEMLNNNI ESERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSSWHV STTFEGMPPSGNQLPPLERTEGQMPNSSRLELSSSASSQEERTVGVAFNQETGHWERIYTQSSR SGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPARLSPAAYYAQR MIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGPSVEGTDLEFEDFEDNGDRSRHRAPRNA RMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANT TYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISADGQLLAAFIPSSQRGFPDEGILA VYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGLASRRILLHPSTEHMVAQVFRLQQAHG GETSMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPEALNSGIEYYWD QLNETVFTVHSSSRSSERPGTSRATWRTDRDMGLMNAIGLQPRNPTTSVTSQGTQTLALQLQNA ETQTEREEEEPGTASSGPGEGEGSEYGGSGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGF GNNIIVSHRIHRSSQTGTESGAARTSSPQPSTSRGLLSEPGQLAERGLSPRTASWDQPSTSGRE LPQPALSSSSPVPIPVPLASNEGPTMHCNVTNNSHLPEGDSSNVGEAAGPSGEPRNR hide sequence

RefSeq Acc Id:	XP_008760256 ⟸ XM_008762034
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6AF66 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPTLDFLLAFSPD RTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGG SESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEMERVRLVRFDPLG HYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLLHNFLHMLSSRSSGIQT EPFHPPEQASSTQQDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREL APGLTGSEWTRTVLTLNSRSEVESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPS SGLATESDGGNGSSQNNSGNIRHELQCDLRRFFLEYDRLQELDQSLSGETPQTQQAQEMLNNNI ESERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSSWHV STTFEGMPPSGNQLPPLERTEGQMPNSSRLELSSSASSQEERTVGVAFNQETGHWERIYTQSSR SGTVSQEALHQDMPEESSEEDSLRRLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSS SSSDNQGPSVEGTDLEFEDFEDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHE RGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNC KIYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSP MGRYVMVGLASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSAR WLPEPGLGLAYGTNKGDLVICRPEALNSGIEYYWDQLNETVFTVHSSSRSSERPGTSRATWRTD RDMGLMNAIGLQPRNPTTSVTSQGTQTLALQLQNAETQTEREEEEPGTASSGPGEGEGSEYGGS GEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTESGAARTSSPQ PSTSRGLLSEPGQLAERGLSPRTASWDQPSTSGRELPQPALSSSSPVPIPVPLASNEGPTMHCN VTNNSHLPEGDSSNVGEAAGPSGEPRNR hide sequence

Ensembl Acc Id:

ENSRNOP00000075219 ⟸ ENSRNOT00000084809

Ensembl Acc Id:

ENSRNOP00000039742 ⟸ ENSRNOT00000045644

Ensembl Acc Id:

ENSRNOP00000073365 ⟸ ENSRNOT00000085614

RefSeq Acc Id:	XP_038961691 ⟸ XM_039105763
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038961692 ⟸ XM_039105764
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038961693 ⟸ XM_039105765
- Peptide Label:	isoform X9

Ensembl Acc Id:

ENSRNOP00000091295 ⟸ ENSRNOT00000105609

Ensembl Acc Id:

ENSRNOP00000087603 ⟸ ENSRNOT00000093866

RefSeq Acc Id:	XP_063140521 ⟸ XM_063284451
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K5B6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140523 ⟸ XM_063284453
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063140524 ⟸ XM_063284454
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063140520 ⟸ XM_063284450
- Peptide Label:	isoform X1
- UniProtKB:	A6HNE5 (UniProtKB/TrEMBL), F1LNQ2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140522 ⟸ XM_063284452
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K5B6 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1LNQ2-F1-model_v2	AlphaFold	F1LNQ2	1-1300	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692219

Promoter ID:

EPDNEW_R2743

Type:

initiation region

Name:

Ambra1_1

Description:

autophagy and beclin 1 regulator 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	80,634,523 - 80,634,583	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621330	AgrOrtholog
BioCyc Gene	G2FUF-48719	BioCyc
Ensembl Genes	ENSRNOG00000017422	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000045644	ENTREZGENE
	ENSRNOT00000045644.7	UniProtKB/TrEMBL
	ENSRNOT00000085614	ENTREZGENE
	ENSRNOT00000085614.3	UniProtKB/TrEMBL
	ENSRNOT00000093866	ENTREZGENE
	ENSRNOT00000093866.2	UniProtKB/TrEMBL
	ENSRNOT00000105609	ENTREZGENE
	ENSRNOT00000105609.2	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7373916	IMAGE-MGC_LOAD
InterPro	AMBRA1_autophagy	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_CS	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
KEGG Report	rno:59319	UniProtKB/TrEMBL
MGC_CLONE	MGC:112805	IMAGE-MGC_LOAD
NCBI Gene	59319	ENTREZGENE
PANTHER	ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1	UniProtKB/TrEMBL
	ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1	UniProtKB/TrEMBL
Pfam	WD40	UniProtKB/TrEMBL
PhenoGen	Ambra1	PhenoGen
PROSITE	WD_REPEATS_1	UniProtKB/TrEMBL
	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000017422	RatGTEx
SMART	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	WD40_like	UniProtKB/TrEMBL
UniProt	A0A0G2K5B6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AF66	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AGV8	ENTREZGENE, UniProtKB/TrEMBL
	A6HNE5	ENTREZGENE, UniProtKB/TrEMBL
	F1LNQ2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-05-04	Ambra1	autophagy and beclin 1 regulator 1	Ambra1	autophagy/beclin 1 regulator 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	Nyw1	ischemia related factor NYW-1			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Nyw1	ischemia related factor NYW-1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB