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Gene: Dnajc2 (DnaJ heat shock protein family (Hsp40) member C2) Rattus norvegicus

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Symbol:

Dnajc2

Name:

DnaJ heat shock protein family (Hsp40) member C2

RGD ID:

620524

Description:

Predicted to enable several functions, including Hsp70 protein binding activity; histone binding activity; and ubiquitin-modified histone reader activity. Involved in negative regulation of cell growth. Predicted to be located in cytoplasm and nucleolus. Predicted to be active in cytosol. Orthologous to human DNAJC2 (DnaJ heat shock protein family (Hsp40) member C2); INTERACTS WITH (+)-schisandrin B; 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 2,2',4,4'-Tetrabromodiphenyl ether.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

(rat homolog) mouse id-associated protein 1; DnaJ (Hsp40) homolog, subfamily C, member 2; dnaJ homolog subfamily C member 2; gliosarcoma-related antigen MIDA1; MGC105894; MIDA1; Zrf2; zuotin related factor 2; zuotin-related factor 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	14,162,490 - 14,189,662 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	14,163,838 - 14,192,846 (+)	Ensembl				GRCr8
mRatBN7.2	4	13,270,239 - 13,297,438 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	13,270,191 - 13,297,431 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	18,416,844 - 18,442,774 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	14,231,613 - 14,257,127 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	12,602,482 - 12,628,411 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	9,881,505 - 9,908,693 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	9,882,904 - 9,908,689 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	9,884,085 - 9,909,844 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	8,719,916 - 8,746,752 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	8,862,809 - 8,888,344 (+)	NCBI		Celera
RGSC_v3.1	4	8,719,942 - 8,746,749 (+)	NCBI
Cytogenetic Map	4	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(S)-amphetamine (ISO)

1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane (EXP)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

1H-pyrazole (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

4,4'-sulfonyldiphenol (ISO)

4-amino-2,6-dinitrotoluene (EXP)

aflatoxin B1 (ISO)

ammonium chloride (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bis(2-chloroethyl) sulfide (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

chlorpyrifos (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (EXP)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

elemental selenium (ISO)

enzyme inhibitor (ISO)

fenofibrate (ISO)

fenthion (ISO)

flutamide (EXP)

FR900359 (ISO)

furan (EXP)

gentamycin (EXP)

GSK-J4 (ISO)

ivermectin (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methidathion (ISO)

methylmercury chloride (ISO)

N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal (ISO)

N-ethyl-N-nitrosourea (ISO)

nitrates (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (ISO)

paraquat (EXP)

pentachlorophenol (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

phosgene (ISO)

pirinixic acid (ISO)

propiconazole (ISO)

quercetin (ISO)

selenium atom (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

succimer (ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

toluene (EXP)

trichloroethene (ISO)

trichostatin A (ISO)

tungsten (ISO)

valproic acid (ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

'de novo' cotranslational protein folding (IBA,IEA)

chromatin organization (IEA)

DNA replication (ISO)

DNA-templated transcription (IEA)

negative regulation of cell growth (IDA)

negative regulation of DNA biosynthetic process (ISO)

positive regulation of DNA-templated transcription (IEA,ISO,ISS)

regulation of translational fidelity (IEA)

Cellular Component

cytoplasm (IEA,ISO)

cytosol (IBA,IEA,ISO,ISS)

nucleolus (IEA,ISO)

nucleus (IEA,ISO,ISS)

Molecular Function

chromatin binding (IEA,ISO,ISS)

histone binding (IEA,ISO,ISS)

Hsp70 protein binding (IBA,IEA,ISO)

protein binding (ISO)

ribosome binding (IBA,IEA)

ubiquitin-modified histone reader activity (IEA,ISO,ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
5.	Immunization with an antigen identified by cytokine tumor vaccine-assisted SEREX (CAS) suppressed growth of the rat 9L glioma in vivo.	Okada H, etal., Cancer Res 2001 Mar 15;61(6):2625-31.
6.	GOA pipeline	RGD automated data pipeline
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:7559602	PMID:8885239	PMID:12477932	PMID:15489334	PMID:16002468	PMID:21179169	PMID:22658674	PMID:28416769

Genomics

Comparative Map Data

Dnajc2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	14,162,490 - 14,189,662 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	14,163,838 - 14,192,846 (+)	Ensembl				GRCr8
mRatBN7.2	4	13,270,239 - 13,297,438 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	13,270,191 - 13,297,431 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	18,416,844 - 18,442,774 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	14,231,613 - 14,257,127 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	12,602,482 - 12,628,411 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	9,881,505 - 9,908,693 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	9,882,904 - 9,908,689 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	9,884,085 - 9,909,844 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	8,719,916 - 8,746,752 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	8,862,809 - 8,888,344 (+)	NCBI		Celera
RGSC_v3.1	4	8,719,942 - 8,746,749 (+)	NCBI
Cytogenetic Map	4	q11	NCBI

DNAJC2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	103,312,289 - 103,344,767 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	103,312,289 - 103,344,830 (-)	Ensembl			hg38	GRCh38
GRCh37	7	102,952,736 - 102,985,214 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	102,740,157 - 102,772,556 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	102,546,872 - 102,579,064	NCBI
Celera	7	97,760,144 - 97,792,539 (-)	NCBI		Celera
Cytogenetic Map	7	q22.1	NCBI
HuRef	7	97,315,139 - 97,347,680 (-)	NCBI		HuRef
CHM1_1	7	102,885,927 - 102,918,312 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	104,626,740 - 104,659,211 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	102,313,287 - 102,345,686 (-)	NCBI

Dnajc2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	21,962,279 - 21,990,183 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	21,962,265 - 21,990,249 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	21,757,266 - 21,785,264 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	21,757,267 - 21,785,251 (-)	Ensembl			mm10	GRCm38
MGSCv37	5	21,263,095 - 21,290,983 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	21,269,101 - 21,296,989 (-)	NCBI		MGSCv36	mm8
Celera	5	18,728,195 - 18,756,090 (-)	NCBI		Celera
Cytogenetic Map	5	A3	NCBI
cM Map	5	9.97	NCBI

Dnajc2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	8,317,646 - 8,338,501 (-)	Ensembl
ChiLan1.0	NW_004955410	8,317,640 - 8,338,407 (-)	NCBI	ChiLan1.0	ChiLan1.0

DNAJC2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	140,171,849 - 140,204,012 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	188,441,817 - 188,473,885 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	95,303,823 - 95,336,085 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	108,048,243 - 108,080,373 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	108,048,307 - 108,080,127 (-)	Ensembl			panPan2	panpan1.1

DNAJC2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	16,866,795 - 16,894,143 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	16,887,901 - 16,893,857 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	16,506,808 - 16,541,831 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	17,154,371 - 17,189,146 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	17,149,577 - 17,189,088 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	16,919,310 - 16,954,307 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	16,858,208 - 16,893,227 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	17,126,436 - 17,161,453 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dnajc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	59,044,989 - 59,074,652 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936479	20,169,016 - 20,198,411 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936479	20,168,991 - 20,198,440 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DNAJC2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	103,329,881 - 103,362,608 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	103,329,873 - 103,362,599 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	113,938,381 - 113,971,115 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DNAJC2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	72,286,515 - 72,320,780 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	72,286,573 - 72,320,841 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666042	31,681,893 - 31,716,466 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dnajc2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624739	26,018,247 - 26,045,738 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624739	26,018,209 - 26,045,781 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dnajc2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	151,061,973 - 151,088,111 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Dnajc2
122 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	46
Count of miRNA genes:	45
Interacting mature miRNAs:	46
Transcripts:	ENSRNOT00000016909
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2302371	Stl22	Serum triglyceride level QTL 22	5.15		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	13080146	58080146	Rat
8552903	Pigfal2	Plasma insulin-like growth factor 1 level QTL 2	7.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	4	1	32668025	Rat
724557	Plsm1	Polydactyly-luxate syndrome (PLS) morphotypes QTL 1		0.0003	forelimb integrity trait (VT:0010562)	front foot phalanges count (CMO:0001947)	4	1	28392287	Rat
9590100	Sffal4	Serum free fatty acids level QTL 4	7.36	0.05	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	4	1	32668025	Rat
8552906	Pigfal3	Plasma insulin-like growth factor 1 level QTL 3			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	4	11038706	56038706	Rat
1357341	Gluco5	Glucose level QTL 5	6.4		adipocyte free fatty acid secretion trait (VT:0010465)	absolute change in adipocyte free fatty acid secretion per unit volume (CMO:0001446)	4	1	34142783	Rat
1357343	Gluco4	Glucose level QTL 4		0.00002	adipocyte glucose uptake trait (VT:0004185)	adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)	4	1	34142783	Rat
8552782	Vie1	Viral induced encephalitis QTL 1	26.4		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	4	1	35396961	Rat
6478766	Anxrr47	Anxiety related response QTL 47		0.09637	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	11038706	56038706	Rat
631642	Stl2	Serum triglyceride level QTL 2	3.3		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	5894575	57613242	Rat
6478769	Anxrr48	Anxiety related response QTL 48		0.02514	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	11038706	56038706	Rat
631261	Tcas3	Tongue tumor susceptibility QTL 3	6.88		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	4	11706604	92690519	Rat
61333	Gluco16	Glucose level QTL 16	4.3	0.00001	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	1	31106810	Rat
61408	Scl23	Serum cholesterol level QTL 23		0.0005	blood HDL phospholipid amount (VT:0010504)	serum high density lipoprotein phospholipid level (CMO:0001567)	4	1	28392287	Rat
631209	Bw2	Body weight QTL2	4.2		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	4	1	45429897	Rat
8552803	Bw144	Body weight QTL 144	16		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	4	1	35396961	Rat
8694374	Bw155	Body weight QTL 155	3.39	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	4	11038706	56038706	Rat
8552801	Bw143	Body weight QTL 143	7.3		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	4	1	35396961	Rat
2303168	Bp330	Blood pressure QTL 330	4.25	0.017	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	5889999	148002343	Rat
9589046	Scfw2	Subcutaneous fat weight QTL 2	5.54	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	4	1	32668025	Rat
6478724	Anxrr35	Anxiety related response QTL 35		0.00449	defecation behavior trait (VT:0010462)	defecation measurement (CMO:0000997)	4	11038706	56038706	Rat
61351	Bp33	Blood pressure QTL 33		0.0018	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	1	28392287	Rat
61415	Eae11	Experimental allergic encephalomyelitis QTL 11	2.9		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	4	1	40471598	Rat
1641905	Colcr1	Colorectal carcinoma resistance QTL 1	4.3	0.0003	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	4	8428551	30449094	Rat
619616	Bp79	Blood pressure QTL 79		0.0292	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	5889999	50889999	Rat
8552809	Vie5	Viral induced encephalitis QTL 5	25.3		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	4	1	35396961	Rat
738021	Hcar13	Hepatocarcinoma resistance QTL 13	4.3		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	4	1	33538816	Rat
70192	BpQTLcluster5	Blood pressure QTL cluster 5	4.183		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	4	1	63900697	Rat
9590304	Scort17	Serum corticosterone level QTL 17	4.96	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	11038706	56038706	Rat
9589097	Slep11	Serum leptin concentration QTL 11	5.09	0.001	blood leptin amount (VT:0005667)	plasma leptin level (CMO:0000781)	4	1	32668025	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat
1300141	Bp178	Blood pressure QTL 178			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	10758701	40490708	Rat

Markers in Region

RH129581

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	4	14,189,058 - 14,189,628 (+)	Marker Load Pipeline
mRatBN7.2	4	13,296,834 - 13,297,404 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	9,908,090 - 9,908,659	NCBI	Rnor6.0
Rnor_5.0	4	9,909,248 - 9,909,817	UniSTS	Rnor5.0
RGSC_v3.4	4	8,746,156 - 8,746,725	UniSTS	RGSC3.4
Celera	4	8,887,746 - 8,888,317	UniSTS
Cytogenetic Map	4	q11	UniSTS

RH142375

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	4	14,189,007 - 14,189,554 (+)	Marker Load Pipeline
mRatBN7.2	4	13,296,783 - 13,297,330 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	9,908,039 - 9,908,585	NCBI	Rnor6.0
Rnor_5.0	4	9,909,197 - 9,909,743	UniSTS	Rnor5.0
RGSC_v3.4	4	8,746,105 - 8,746,651	UniSTS	RGSC3.4
Celera	4	8,887,695 - 8,888,243	UniSTS
RH 3.4 Map	4	34.8	UniSTS
Cytogenetic Map	4	q11	UniSTS

RH136383

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	4	14,188,982 - 14,189,563 (+)	Marker Load Pipeline
mRatBN7.2	4	13,296,758 - 13,297,339 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	9,908,014 - 9,908,594	NCBI	Rnor6.0
Rnor_5.0	4	9,909,172 - 9,909,752	UniSTS	Rnor5.0
RGSC_v3.4	4	8,746,080 - 8,746,660	UniSTS	RGSC3.4
Celera	4	8,887,670 - 8,888,252	UniSTS
Cytogenetic Map	4	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_053776	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC141152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF118853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY322161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY322162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY322163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY322164	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC088838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000016909 ⟹ ENSRNOP00000016909

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	14,163,838 - 14,189,662 (+)	Ensembl
mRatBN7.2 Ensembl	4	13,271,649 - 13,297,425 (+)	Ensembl
Rnor_6.0 Ensembl	4	9,882,904 - 9,908,689 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096397 ⟹ ENSRNOP00000082213

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	14,163,845 - 14,189,725 (+)	Ensembl
mRatBN7.2 Ensembl	4	13,270,191 - 13,297,431 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116435 ⟹ ENSRNOP00000078600

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	14,163,845 - 14,189,662 (+)	Ensembl
mRatBN7.2 Ensembl	4	13,271,649 - 13,297,425 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000136389 ⟹ ENSRNOP00000111806

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	14,168,762 - 14,189,658 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000142317 ⟹ ENSRNOP00000100530

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	14,163,845 - 14,192,846 (+)	Ensembl

RefSeq Acc Id:

NM_053776 ⟹ NP_446228

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	14,163,845 - 14,189,662 (+)	NCBI
mRatBN7.2	4	13,271,617 - 13,297,438 (+)	NCBI
Rnor_6.0	4	9,882,948 - 9,908,686 (+)	NCBI
Rnor_5.0	4	9,884,085 - 9,909,844 (+)	NCBI
RGSC_v3.4	4	8,719,916 - 8,746,752 (+)	RGD
Celera	4	8,862,809 - 8,888,344 (+)	RGD

Sequence:

show sequence

GTGCTTACTGGTCGTCTCCATGCGCCGGTTCCTGGGCGTAAAGCCTAGGCGCGAGGCTCAGCCC
AGCAGGTAGTGAGGACGCAGAGGGCCCTGCCTGCTGGACGAGAGCCGCGGCGTCCGCGGGAACA
GCTCCAGCCAGCATGCTGCTCCTGCCCAGCGCCGCGGAGGGCCAGGGCACCGCCATCACCCACG
CTCTGACCTCCGCCTCTGCAGTCTGTCAAGTCGAACCCGTGGGAAGATGGTTTGAAGCTTTCGT
TAAGAGGAGAAACAGAAATGCTTCCACATCTTTTCAGGAACTGGAAGATAAGAAAGAGTTGTCA
GAGGAATCAGAAGATGAAGAGTTACAGTTAGAAGAGTTCCCCATGCTGAAAACACTTGATCCCA
AAGATTGGAAGAATCAAGATCATTATGCAGTTCTTGGACTTGGCCACGTCAGATACAAAGCCAC
ACAGAGACAGATCAAAGCAGCTCACAAAACAATGGTCTTGAAACATCACCCAGACAAGCGGAAA
GCGGCTGGGGAACCCATCAAAGAAGGGGACAACGACTACTTCACTTGTATAACGAAAGCTTATG
AAATGTTGTCTGATCCAGTGAAAAGGCGGGCATTTAACAGTGTAGATCCTACTTTTGACAACTC
AGTTCCTTCTAAAAGTGAAGCAAAGGAGAATTTTTTCCAAGTGTTTTCTCCAGTGTTTGAAAGG
AATTCCAGATGGTCAAATAAGAAAAATGTTCCCAAACTTGGTGATATGAACTCATCATTTGAAG
ATGTAGATGCATTTTATTCCTTCTGGTATAATTTTGATTCTTGGAGAGAATTTTCTTACTTAGA
TGAAGAAGAAAAAGAAAAAGCAGAATGTCGTGATGAGAGGAAATGGATTGAAAAGCAGAACAGA
GCAACGAGGGCACAAAGGAAGAAGGAAGAGATGAACAGAATAAGAACTTTAGTTGATAATGCTT
ACAGTTGTGACCCAAGGATAAAAAAGTTTAAGGAAGAAGGAAAGGCCAAGAAGGAAGCAGAAAA
GAGAGCAAAAGCAGAAGCCAGGAGGAAGGAACAGGAAGCCAAAGAAAAGCAAAGACAAGCTGAG
TTAGAAGCTGTTCGGTTGGCTAAAGAGAAAGAAGAGGAAGAAGTTAGACAGCAAGCATTGTTGG
CCAAGAAAGAAAAGGAGATCCAGAAAAAAGCCATTAAAAAGGAAAGGCAGAAACTTCGTAACTC
ATGCAAGAACTGGAATCACTTCTCGGACAATGAGGCAGACCGGGTTAAAATGATGGAAGAGGTG
GAAAAACTCTGTGATCGGCTTGAACTAGCAAGCCTACAGTGCTTGAATGAAATACTGGCATCAT
CTACGAGAGAAGTGGGAAAAGCTGCACTTGAAAAACAGATAGAAGAAGTCAATGAGCTGATGAG
GAAAGAGAAGGAGGAAGCTGATGCCCGGATGCGGCAAGCATCTAAGAATGCAGAGAAGTCAACC
GGCAGAAGTGGGAGTGGCAGTAAGAACTGGTCAGAAGATGATCTGCAATTATTAATTAAGGCTG
TCAATCTCTTCCCCGCTGGGACAAACTCCAGATGGGAAGTCATTGCTAATTATATGAACATACA
TTCTTCTTCTGGTGTCAAAAGAACTGCCAAAGATGTTATTGGTAAAGCTAAAAGCCTCCAAAAA
CTTGACCCTCACCAAAAAGATGACATTAACAAAAAGGCATTTGATAAGTTTAAAAAAGAACATG
GCGTGGCCCCTCAGGCTGACAGTGCGGCACCCTCAGAGCGATTTGAAGGTCCCTGCATAGATTC
CATCCCTTGGACAACAGAAGAGCAGAAACTTCTAGAACAGGCTTTGAAAACATACCCGGTAAAT
ACTCCGGAAAGATGGGAAAAGATCGCGGAAGCCGTTCCTGGCAGGACGAAGAAGGACTGCATGA
GGCGATACAAGGAGCTCGTGGAGATGGTGAAAGCCAAGAAAGCTGCTCAGGAGCAGGTGCTGAA
TGCCAGCAGAGCCAGGAAGTGACGCGGGCAGGCGGTCTCGGTCTGTGTGCACTTTTATAATAAA
ACTCAAAATACTGTACAAAAAAAAAAAAAAAAAAAAAAAAAGG

hide sequence

RefSeq Acc Id:

XM_008762628 ⟹ XP_008760850

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	14,162,490 - 14,189,662 (+)	NCBI
mRatBN7.2	4	13,270,239 - 13,297,438 (+)	NCBI
Rnor_6.0	4	9,881,505 - 9,908,693 (+)	NCBI

Sequence:

show sequence

GCACTGCTGACTGGAGGGAGGATTATTACCTGTTATGAGACATTTATTTACCCCGCTCCCTCAC
AAGTCTGGTCTTTTTAGGTACCCGAACACGAACTTCCAAGACTAGCCCTGGCTCAGTTGATGAA
CTTACATCCTGATTTAGTCATTAATGAATAATACACACAGCCGGGAACTGATGCGTCTAGGAAC
TGTTCGTTCGGGTACCTTGGATTCCAGCCGGTTTAGAGTCATAGAGGAAGTAGGCGGCCGCGCG
CATTGGCGCGAGTCCGTAGGGGTGGGATTGGCGGCCGCGCCGCGAAAGCTCCATCCCGGAAGTG
CTTACTGGTCGTCTCCATGCGCCGGTTCCTGGGCGTAAAGCCTAGGCGCGAGGCTCAGCCCAGC
AGGTAGTGAGGACGCAGAGGGCCCTGCCTGCTGGACGAGAGCCGCGGCGTCCGCGGGAACAGCT
CCAGCCAGCATGCTGCTCCTGCCCAGCGCCGCGGAGGGCCAGGGCACCGCCATCACCCACGCTC
TGACCTCCGCCTCTGCAGTCTGTCAAGTCGAACCCGTGGGAAGATGGTTTGAAGCTTTCGTTAA
GAGGAGAAACAGAAATGCTTCCACATCTTTTCAGGAACTGGAAGATAAGAAAGAGTTGTCAGAG
GAATCAGAAGATGAAGAGTTACAGTTAGAAGAGTTCCCCATGCTGAAAACACTTGATCCCAAAG
ATTGGAAGAATCAAGATCATTATGCAGTTCTTGGACTTGGCCACGTCAGATACAAAGCCACACA
GAGACAGATCAAAGCAGCTCACAAAACAATGGTCTTGAAACATCACCCAGACAAGCGGAAAGCG
GCTGGGGAACCCATCAAAGAAGGGGACAACGACTACTTCACTTGTATAACGAAAGCTTATGAAA
TGTTGTCTGATCCAGTGAAAAGGCGGGCATTTAACAGTGTAGATCCTACTTTTGACAACTCAGT
TCCTTCTAAAAGTGAAGCAAAGGAGAATTTTTTCCAAGTGTTTTCTCCAGTGTTTGAAAGGAAT
TCCAGATGGTCAAATAAGAAAAATGTTCCCAAACTTGGTGATATGAACTCATCATTTGAAGATG
TAGATGCATTTTATTCCTTCTGGTATAATTTTGATTCTTGGAGAGAATTTTCTTACTTAGATGA
AGAAGAAAAAGAAAAAGCAGAATGTCGTGATGAGAGGAAATGGATTGAAAAGCAGAACAGAGCA
ACGAGGGCACAAAGGAAGAAGGAAGAGATGAACAGAATAAGAACTTTAGTTGATAATGCTTACA
GTTGTGACCCAAGGATAAAAAAGTTTAAGGAAGAAGGAAAGGCCAAGAAGGAAGCAGAAAAGAG
AGCAAAAGCAGAAGCCAGGAGGAAGGAACAGGAAGCCAAAGAAAAGCAAAGACAAGCTGAGTTA
GAAGCTGTTCGGTTGGCTAAAGAGAAAGAAGAGGAAGAAGTTAGACAGCAAGCATTGTTGGCCA
AGAAAGAAAAGGAGATCCAGAAAAAAGCCATTAAAAAGGAAAGGCAGAAACTTCGTAACTCATG
CAAGAACTGGAATCACTTCTCGGACAATGAGGCAGACCGGGTTAAAATGATGGAAGAGGTGGAA
AAACTCTGTGATCGGCTTGAACTAGCAAGCCTACAGTGCTTGAATGAAATACTGGCATCATCTA
CGAGAGAAGTGGGAAAAGCTGCACTTGAAAAACAGATAGAAGAAGTCAATGAGCTGATGAGGAA
AGAGAAGGAGGAAGCTGATGCCCGGATGCGGCAAGCATCTAAGAATGCAGAGAAGTCAACCGGC
AGAAGTGGGAGTGGCAGTAAGAACTGGTCAGAAGATGATCTGCAATTATTAATTAAGGCTGTCA
ATCTCTTCCCCGCTGGGACAAACTCCAGATGGGAAGTCATTGCTAATTATATGAACATACATTC
TTCTTCTGGTGTCAAAAGAACTGCCAAAGATGTTATTGGTAAAGCTAAAAGCCTCCAAAAACTT
GACCCTCACCAAAAAGATGACATTAACAAAAAGGCATTTGATAAGTTTAAAAAAGAACATGGCG
TGGCCCCTCAGGCTGACAGTGCGGCACCCTCAGAGCGATTTGAAGGTCCCTGCATAGATTCCAT
CCCTTGGACAACAGAAGAGCAGAAACTTCTAGAACAGGCTTTGAAAACATACCCGGTAAATACT
CCGGAAAGATGGGAAAAGATCGCGGAAGCCGTTCCTGGCAGGACGAAGAAGGACTGCATGAGGC
GATACAAGGAGCTCGTGGAGATGGTGAAAGCCAAGAAAGCTGCTCAGGAGCAGGTGCTGAATGC
CAGCAGAGCCAGGAAGTGACGCGGGCAGGCGGTCTCGGTCTGTGTGCACTTTTATAATAAAACT
CAAAATACTGTACACACCCCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_446228	(Get FASTA)	NCBI Sequence Viewer
	XP_008760850	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD45407	(Get FASTA)	NCBI Sequence Viewer
	AAH88838	(Get FASTA)	NCBI Sequence Viewer
	AAP84338	(Get FASTA)	NCBI Sequence Viewer
	AAP84339	(Get FASTA)	NCBI Sequence Viewer
	AAP84340	(Get FASTA)	NCBI Sequence Viewer
	AAP84341	(Get FASTA)	NCBI Sequence Viewer
	EDL99414	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000016909
GenBank Protein	Q7TQ20	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_446228 ⟸ NM_053776

- UniProtKB:

Q9WVG4 (UniProtKB/Swiss-Prot), Q7TQ18 (UniProtKB/Swiss-Prot), Q5HZY5 (UniProtKB/Swiss-Prot), Q7TQ20 (UniProtKB/Swiss-Prot), A0A0G2JSM0 (UniProtKB/TrEMBL), A6K5A5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLLLPSAAEGQGTAITHALTSASAVCQVEPVGRWFEAFVKRRNRNASTSFQELEDKKELSEESE
DEELQLEEFPMLKTLDPKDWKNQDHYAVLGLGHVRYKATQRQIKAAHKTMVLKHHPDKRKAAGE
PIKEGDNDYFTCITKAYEMLSDPVKRRAFNSVDPTFDNSVPSKSEAKENFFQVFSPVFERNSRW
SNKKNVPKLGDMNSSFEDVDAFYSFWYNFDSWREFSYLDEEEKEKAECRDERKWIEKQNRATRA
QRKKEEMNRIRTLVDNAYSCDPRIKKFKEEGKAKKEAEKRAKAEARRKEQEAKEKQRQAELEAV
RLAKEKEEEEVRQQALLAKKEKEIQKKAIKKERQKLRNSCKNWNHFSDNEADRVKMMEEVEKLC
DRLELASLQCLNEILASSTREVGKAALEKQIEEVNELMRKEKEEADARMRQASKNAEKSTGRSG
SGSKNWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPH
QKDDINKKAFDKFKKEHGVAPQADSAAPSERFEGPCIDSIPWTTEEQKLLEQALKTYPVNTPER
WEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQEQVLNASRARK

hide sequence

RefSeq Acc Id:	XP_008760850 ⟸ XM_008762628
- Peptide Label:	isoform X1
- UniProtKB:	Q9WVG4 (UniProtKB/Swiss-Prot), Q7TQ18 (UniProtKB/Swiss-Prot), Q5HZY5 (UniProtKB/Swiss-Prot), Q7TQ20 (UniProtKB/Swiss-Prot), A0A0G2JSM0 (UniProtKB/TrEMBL), A6K5A5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLLLPSAAEGQGTAITHALTSASAVCQVEPVGRWFEAFVKRRNRNASTSFQELEDKKELSEESE DEELQLEEFPMLKTLDPKDWKNQDHYAVLGLGHVRYKATQRQIKAAHKTMVLKHHPDKRKAAGE PIKEGDNDYFTCITKAYEMLSDPVKRRAFNSVDPTFDNSVPSKSEAKENFFQVFSPVFERNSRW SNKKNVPKLGDMNSSFEDVDAFYSFWYNFDSWREFSYLDEEEKEKAECRDERKWIEKQNRATRA QRKKEEMNRIRTLVDNAYSCDPRIKKFKEEGKAKKEAEKRAKAEARRKEQEAKEKQRQAELEAV RLAKEKEEEEVRQQALLAKKEKEIQKKAIKKERQKLRNSCKNWNHFSDNEADRVKMMEEVEKLC DRLELASLQCLNEILASSTREVGKAALEKQIEEVNELMRKEKEEADARMRQASKNAEKSTGRSG SGSKNWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPH QKDDINKKAFDKFKKEHGVAPQADSAAPSERFEGPCIDSIPWTTEEQKLLEQALKTYPVNTPER WEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQEQVLNASRARK hide sequence

Ensembl Acc Id:

ENSRNOP00000016909 ⟸ ENSRNOT00000016909

Ensembl Acc Id:

ENSRNOP00000082213 ⟸ ENSRNOT00000096397

Ensembl Acc Id:

ENSRNOP00000078600 ⟸ ENSRNOT00000116435

Ensembl Acc Id:

ENSRNOP00000100530 ⟸ ENSRNOT00000142317

Ensembl Acc Id:

ENSRNOP00000111806 ⟸ ENSRNOT00000136389

Protein Domains

HTH myb-type J Myb-like SANT

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q7TQ20-F1-model_v2	AlphaFold	Q7TQ20	1-621	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692807

Promoter ID:

EPDNEW_R3330

Type:

initiation region

Name:

Dnajc2_1

Description:

DnaJ heat shock protein family member C2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	9,882,954 - 9,883,014	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:620524	AgrOrtholog
BioCyc Gene	G2FUF-45987	BioCyc
Ensembl Genes	ENSRNOG00000012392	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000016909	ENTREZGENE
Gene3D-CATH	1.10.287.110	UniProtKB/Swiss-Prot
	1.10.8.840	UniProtKB/Swiss-Prot
	Homeodomain-like	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7132881	IMAGE-MGC_LOAD
InterPro	DnaJ_domain	UniProtKB/Swiss-Prot
	DnaJ_domain_CS	UniProtKB/Swiss-Prot
	Homeobox-like_sf	UniProtKB/Swiss-Prot
	J_dom_sf	UniProtKB/Swiss-Prot
	Myb_dom	UniProtKB/Swiss-Prot
	RAC_head	UniProtKB/Swiss-Prot
	RAC_head_sf	UniProtKB/Swiss-Prot
	SANT/Myb	UniProtKB/Swiss-Prot
	SANT_dom	UniProtKB/Swiss-Prot
	ZUO1-like_ZHD	UniProtKB/Swiss-Prot
	Zuotin/DnaJC2	UniProtKB/Swiss-Prot
KEGG Report	rno:116456	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:105894	IMAGE-MGC_LOAD
NCBI Gene	116456	ENTREZGENE
PANTHER	DNAJ HOMOLOG SUBFAMILY C MEMBER 2	UniProtKB/Swiss-Prot
	PTHR43999	UniProtKB/Swiss-Prot
Pfam	DnaJ	UniProtKB/Swiss-Prot
	Myb_DNA-binding	UniProtKB/Swiss-Prot
	RAC_head	UniProtKB/Swiss-Prot
	ZUO1-like_ZHD	UniProtKB/Swiss-Prot
PhenoGen	Dnajc2	PhenoGen
PROSITE	DNAJ_1	UniProtKB/Swiss-Prot
	DNAJ_2	UniProtKB/Swiss-Prot
	SANT	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000012392	RatGTEx
SMART	DnaJ	UniProtKB/Swiss-Prot
	SANT	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF46565	UniProtKB/Swiss-Prot
	SSF46689	UniProtKB/Swiss-Prot
UniProt	A0A0G2JSM0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZLA9_RAT	UniProtKB/TrEMBL
	A0A8I6G953_RAT	UniProtKB/TrEMBL
	A0ABK0L9B6_RAT	UniProtKB/TrEMBL
	A0ABK0M1H7_RAT	UniProtKB/TrEMBL
	A6K5A5	ENTREZGENE, UniProtKB/TrEMBL
	DNJC2_RAT	UniProtKB/Swiss-Prot
	Q5HZY5	ENTREZGENE
	Q7TQ18	ENTREZGENE
	Q7TQ20	ENTREZGENE
	Q9WVG4	ENTREZGENE
UniProt Secondary	Q5HZY5	UniProtKB/Swiss-Prot
	Q7TQ18	UniProtKB/Swiss-Prot
	Q9WVG4	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-25	Dnajc2	DnaJ heat shock protein family (Hsp40) member C2	Dnajc2	DnaJ (Hsp40) homolog, subfamily C, member 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-08	Dnajc2	DnaJ (Hsp40) homolog, subfamily C, member 2	Zrf2	zuotin related factor 2	Symbol and Name updated	1299863	APPROVED
2002-08-07	Zrf2	zuotin related factor 2			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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