Mob4 (MOB family member 4, phocein) - Rat Genome Database

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Gene: Mob4 (MOB family member 4, phocein) Rattus norvegicus
Analyze
Symbol: Mob4
Name: MOB family member 4, phocein
RGD ID: 620183
Description: Enables kinase binding activity. Predicted to be involved in negative regulation of hippo signaling. Located in several cellular components, including dendritic spine; neuronal cell body; and perinuclear region of cytoplasm. Orthologous to human MOB4 (MOB family member 4, phocein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; aconitine; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: class II mMOB1; MOB-like protein phocein; mob1 homolog 3; MOB1, Mps One Binder kinase activator-like 3; MOB1, Mps One Binder kinase activator-like 3 (yeast); mob3; Mobkl1; Mobkl3; mps one binder kinase activator-like 3; phocein; phocein, Mob-like protein; Phocn; Prei3; preimplantation protein 3
RGD Orthologs
Human
Mouse
Dog
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8964,111,170 - 64,135,740 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl964,111,718 - 64,135,779 (+)EnsemblGRCr8
mRatBN7.2956,617,374 - 56,641,336 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl956,617,368 - 56,641,329 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx965,126,329 - 65,150,264 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0970,242,230 - 70,266,164 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0968,541,958 - 68,565,908 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0961,720,583 - 61,744,532 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl961,720,583 - 61,744,531 (+)Ensemblrn6Rnor6.0
Rnor_5.0961,403,860 - 61,427,809 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4953,922,795 - 53,946,745 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera954,098,848 - 54,122,811 (+)NCBICelera
RGSC_v3.1953,924,208 - 53,948,158 (+)NCBI
Cytogenetic Map9q31NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Interactions of phocein with nucleoside-diphosphate kinase, Eps15, and Dynamin I. Baillat G, etal., J Biol Chem 2002 May 24;277(21):18961-6.
2. Molecular cloning and characterization of phocein, a protein found from the Golgi complex to dendritic spines. Baillat G, etal., Mol Biol Cell 2001 Mar;12(3):663-73.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:18466332   PMID:30053369  


Genomics

Comparative Map Data
Mob4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8964,111,170 - 64,135,740 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl964,111,718 - 64,135,779 (+)EnsemblGRCr8
mRatBN7.2956,617,374 - 56,641,336 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl956,617,368 - 56,641,329 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx965,126,329 - 65,150,264 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0970,242,230 - 70,266,164 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0968,541,958 - 68,565,908 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0961,720,583 - 61,744,532 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl961,720,583 - 61,744,531 (+)Ensemblrn6Rnor6.0
Rnor_5.0961,403,860 - 61,427,809 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4953,922,795 - 53,946,745 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera954,098,848 - 54,122,811 (+)NCBICelera
RGSC_v3.1953,924,208 - 53,948,158 (+)NCBI
Cytogenetic Map9q31NCBI
MOB4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382197,515,554 - 197,553,699 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2197,515,571 - 197,553,699 (+)Ensemblhg38GRCh38
GRCh372198,380,278 - 198,418,423 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362198,088,565 - 198,125,760 (+)NCBIBuild 36Build 36hg18NCBI36
Celera2192,136,193 - 192,173,386 (+)NCBICelera
Cytogenetic Map2q33.1NCBI
HuRef2190,232,691 - 190,270,816 (+)NCBIHuRef
CHM1_12198,386,134 - 198,424,264 (+)NCBICHM1_1
T2T-CHM13v2.02197,999,154 - 198,037,300 (+)NCBIT2T-CHM13v2.0
Mob4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39155,170,404 - 55,194,058 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl155,170,390 - 55,194,058 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38155,131,245 - 55,154,899 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl155,131,231 - 55,154,899 (+)Ensemblmm10GRCm38
MGSCv37155,188,089 - 55,211,743 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36155,075,838 - 55,098,646 (+)NCBIMGSCv36mm8
Celera155,651,452 - 55,675,027 (+)NCBICelera
Cytogenetic Map1C1.2NCBI
cM Map128.03NCBI
HSPE1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1377,020,507 - 7,063,678 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl377,035,829 - 7,062,213 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha377,966,857 - 8,009,888 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0376,910,995 - 6,954,039 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl376,926,127 - 6,954,089 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1376,909,827 - 6,952,869 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0376,876,745 - 6,917,729 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0376,899,891 - 6,942,950 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
MOBKL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15101,390,917 - 101,420,447 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.115101,390,913 - 101,420,282 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215112,565,015 - 112,591,016 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MOB4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11083,017,823 - 83,073,100 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1083,037,028 - 83,074,776 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666040116,371,831 - 116,426,996 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Mob4
107 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:484
Count of miRNA genes:258
Interacting mature miRNAs:328
Transcripts:ENSRNOT00000020536
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)9671488884474983Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)956047863101047863Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)94002992585029925Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)963376862108376862Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)93125043268875676Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)94445825699506504Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)92956766474567664Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)94445825685262605Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92956766483835942Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)94172029586720295Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)93125043265651574Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)944458256121768150Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)93922018684220186Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)948718864108376862Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)94002992585029925Rat
1598849Memor17Memory QTL 172.2exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)95746049778547958Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)95450650499506504Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)93496059079960590Rat

Markers in Region
D9Mco76  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2956,627,713 - 56,627,933 (+)MAPPERmRatBN7.2
Rnor_6.0961,730,923 - 61,731,138NCBIRnor6.0
Rnor_5.0961,414,200 - 61,414,415UniSTSRnor5.0
RGSC_v3.4953,933,135 - 53,933,350UniSTSRGSC3.4
Celera954,109,188 - 54,109,403UniSTS
Cytogenetic Map9q31UniSTS
RH129911  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2956,640,909 - 56,641,092 (+)MAPPERmRatBN7.2
Rnor_6.0961,744,106 - 61,744,288NCBIRnor6.0
Rnor_5.0961,427,383 - 61,427,565UniSTSRnor5.0
RGSC_v3.4953,946,319 - 53,946,501UniSTSRGSC3.4
Celera954,122,385 - 54,122,567UniSTS
RH 3.4 Map9476.98UniSTS
Cytogenetic Map9q31UniSTS
RH143767  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2956,617,875 - 56,618,032 (+)MAPPERmRatBN7.2
Rnor_6.0961,721,085 - 61,721,241NCBIRnor6.0
Rnor_5.0961,404,362 - 61,404,518UniSTSRnor5.0
RGSC_v3.4953,923,297 - 53,923,453UniSTSRGSC3.4
Celera954,099,350 - 54,099,506UniSTS
RH 3.4 Map9477.98UniSTS
Cytogenetic Map9q31UniSTS
RH138957  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2956,640,720 - 56,640,929 (+)MAPPERmRatBN7.2
Rnor_6.0961,743,917 - 61,744,125NCBIRnor6.0
Rnor_5.0961,427,194 - 61,427,402UniSTSRnor5.0
RGSC_v3.4953,946,130 - 53,946,338UniSTSRGSC3.4
Celera954,122,196 - 54,122,404UniSTS
RH 3.4 Map9479.57UniSTS
Cytogenetic Map9q31UniSTS
RH140245  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2956,640,982 - 56,641,195 (+)MAPPERmRatBN7.2
Rnor_6.0961,744,179 - 61,744,391NCBIRnor6.0
Rnor_5.0961,427,456 - 61,427,668UniSTSRnor5.0
RGSC_v3.4953,946,392 - 53,946,604UniSTSRGSC3.4
Celera954,122,458 - 54,122,670UniSTS
RH 3.4 Map9477.67UniSTS
Cytogenetic Map9q31UniSTS
AA818419  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2956,639,413 - 56,639,531 (+)MAPPERmRatBN7.2
Rnor_6.0961,742,610 - 61,742,727NCBIRnor6.0
Rnor_5.0961,425,887 - 61,426,004UniSTSRnor5.0
RGSC_v3.4953,944,823 - 53,944,940UniSTSRGSC3.4
Celera954,120,900 - 54,121,017UniSTS
RH 3.4 Map9477.87UniSTS
Cytogenetic Map9q31UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000020536   ⟹   ENSRNOP00000020536
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl964,111,718 - 64,135,779 (+)Ensembl
mRatBN7.2 Ensembl956,617,368 - 56,641,329 (+)Ensembl
Rnor_6.0 Ensembl961,720,583 - 61,744,531 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000096080   ⟹   ENSRNOP00000084702
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl964,111,761 - 64,135,779 (+)Ensembl
mRatBN7.2 Ensembl956,617,381 - 56,641,328 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000103898   ⟹   ENSRNOP00000092795
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl964,112,094 - 64,135,779 (+)Ensembl
mRatBN7.2 Ensembl956,617,375 - 56,641,328 (+)Ensembl
RefSeq Acc Id: NM_133528   ⟹   NP_598212
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8964,111,789 - 64,135,740 (+)NCBI
mRatBN7.2956,617,374 - 56,641,336 (+)NCBI
Rnor_6.0961,720,583 - 61,744,532 (+)NCBI
Rnor_5.0961,403,860 - 61,427,809 (+)NCBI
RGSC_v3.4953,922,795 - 53,946,745 (+)RGD
Celera954,098,848 - 54,122,811 (+)RGD
Sequence:
RefSeq Acc Id: XM_063266616   ⟹   XP_063122686
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8964,111,170 - 64,135,735 (+)NCBI
Protein Sequences
Protein RefSeqs NP_598212 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122686 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH85708 (Get FASTA)   NCBI Sequence Viewer  
  CAB57295 (Get FASTA)   NCBI Sequence Viewer  
  EDL99048 (Get FASTA)   NCBI Sequence Viewer  
  EDL99049 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000020536
  ENSRNOP00000092795.1
GenBank Protein Q9QYW3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_598212   ⟸   NM_133528
- UniProtKB: Q9QYW3 (UniProtKB/Swiss-Prot),   A6IP11 (UniProtKB/TrEMBL),   A0A8L2QA94 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000020536   ⟸   ENSRNOT00000020536
Ensembl Acc Id: ENSRNOP00000092795   ⟸   ENSRNOT00000103898
Ensembl Acc Id: ENSRNOP00000084702   ⟸   ENSRNOT00000096080
RefSeq Acc Id: XP_063122686   ⟸   XM_063266616
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9QYW3-F1-model_v2 AlphaFold Q9QYW3 1-225 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696672
Promoter ID:EPDNEW_R7196
Type:initiation region
Name:Mob4_1
Description:MOB family member 4, phocein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0961,720,577 - 61,720,637EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620183 AgrOrtholog
BIND 129608
  130460
  134478
BioCyc Gene G2FUF-27532 BioCyc
Ensembl Genes ENSRNOG00000014980 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000020536 ENTREZGENE
  ENSRNOT00000103898.1 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.140.30 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7193103 IMAGE-MGC_LOAD
InterPro MOB_kinase_act_fam UniProtKB/Swiss-Prot
  MOB_kinase_act_sf UniProtKB/Swiss-Prot
KEGG Report rno:171050 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93220 IMAGE-MGC_LOAD
NCBI Gene 171050 ENTREZGENE
PANTHER PTHR22599 UniProtKB/Swiss-Prot
Pfam Mob1_phocein UniProtKB/Swiss-Prot
PhenoGen Mob4 PhenoGen
RatGTEx ENSRNOG00000014980 RatGTEx
SMART Mob1_phocein UniProtKB/Swiss-Prot
Superfamily-SCOP SSF101152 UniProtKB/Swiss-Prot
UniProt A0A8I6GC42_RAT UniProtKB/TrEMBL
  A0A8L2QA94 ENTREZGENE, UniProtKB/TrEMBL
  A6IP11 ENTREZGENE, UniProtKB/TrEMBL
  PHOCN_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-10-18 Mob4  MOB family member 4, phocein  Phocn  phocein, Mob-like protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-09-02 Phocn  phocein, Mob-like protein  Mobkl3  MOB1, Mps One Binder kinase activator-like 3 (yeast)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-19 Mobkl3  MOB1, Mps One Binder kinase activator-like 3 (yeast)  Prei3  preimplantation protein 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Prei3  preimplantation protein 3      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Prei3  preimplantation protein 3      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_cellular_localization localized to membrane fractions 633583
gene_expression protein is detected in adult brain neurons 633583