Ilkap (ILK associated serine/threonine phosphatase) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Ilkap (ILK associated serine/threonine phosphatase) Rattus norvegicus
Analyze
Symbol: Ilkap
Name: ILK associated serine/threonine phosphatase
RGD ID: 620128
Description: Enables protein serine/threonine phosphatase activity. Involved in regulation of nuclear cell cycle DNA replication. Predicted to be located in cytoplasm. Orthologous to human ILKAP (ILK associated serine/threonine phosphatase); PARTICIPATES IN integrin mediated signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: AF095927; integrin-linked kinase-associated serine/threonine phosphatase; integrin-linked kinase-associated serine/threonine phosphatase 2C; PP2Cdelta; protein phosphatase 2C
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8999,413,981 - 99,436,262 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl999,413,978 - 99,436,418 (-)EnsemblGRCr8
mRatBN7.2991,966,440 - 91,988,791 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl991,966,441 - 91,988,892 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx9100,393,225 - 100,415,489 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09105,528,983 - 105,551,247 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09103,892,577 - 103,914,843 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0998,514,599 - 98,536,586 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl998,514,584 - 98,536,581 (-)Ensemblrn6Rnor6.0
Rnor_5.0998,190,668 - 98,212,634 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4990,602,949 - 90,626,753 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera989,507,483 - 89,529,779 (-)NCBICelera
RGSC_v3.1990,807,717 - 90,831,522 (-)NCBI
Cytogenetic Map9q36NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Protein phosphatase 2C binds selectively to and dephosphorylates metabotropic glutamate receptor 3. Flajolet M, etal., Proc Natl Acad Sci U S A 2003 Dec 23;100(26):16006-11. Epub 2003 Dec 08.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. ILK, PINCH and parvin: the tIPP of integrin signalling. Legate KR, etal., Nat Rev Mol Cell Biol. 2006 Jan;7(1):20-31.
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
8. Cloning and characterization of a novel mammalian PP2C isozyme. Tong Y, etal., J Biol Chem 1998 Dec 25;273(52):35282-90.
Additional References at PubMed
PMID:15489334  


Genomics

Comparative Map Data
Ilkap
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8999,413,981 - 99,436,262 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl999,413,978 - 99,436,418 (-)EnsemblGRCr8
mRatBN7.2991,966,440 - 91,988,791 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl991,966,441 - 91,988,892 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx9100,393,225 - 100,415,489 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09105,528,983 - 105,551,247 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09103,892,577 - 103,914,843 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0998,514,599 - 98,536,586 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl998,514,584 - 98,536,581 (-)Ensemblrn6Rnor6.0
Rnor_5.0998,190,668 - 98,212,634 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4990,602,949 - 90,626,753 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera989,507,483 - 89,529,779 (-)NCBICelera
RGSC_v3.1990,807,717 - 90,831,522 (-)NCBI
Cytogenetic Map9q36NCBI
ILKAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382238,170,402 - 238,203,695 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2238,170,400 - 238,203,756 (-)Ensemblhg38GRCh38
GRCh372239,079,043 - 239,112,336 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362238,743,782 - 238,777,063 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342238,861,043 - 238,894,324NCBI
Celera2232,791,584 - 232,824,882 (-)NCBICelera
Cytogenetic Map2q37.3NCBI
HuRef2230,870,240 - 230,903,537 (-)NCBIHuRef
CHM1_12239,084,148 - 239,118,134 (-)NCBICHM1_1
T2T-CHM13v2.02238,660,143 - 238,693,437 (-)NCBIT2T-CHM13v2.0
Ilkap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39191,301,568 - 91,326,566 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl191,301,583 - 91,326,537 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38191,373,846 - 91,398,844 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl191,373,861 - 91,398,815 (-)Ensemblmm10GRCm38
MGSCv37193,272,408 - 93,295,360 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36193,206,237 - 93,229,189 (-)NCBIMGSCv36mm8
Celera194,312,974 - 94,349,943 (-)NCBICelera
Cytogenetic Map1DNCBI
cM Map146.11NCBI
Ilkap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555422,391,431 - 2,408,732 (+)Ensembl
ChiLan1.0NW_0049555422,391,432 - 2,407,559 (+)NCBIChiLan1.0ChiLan1.0
ILKAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213140,802,982 - 140,836,441 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B140,817,949 - 140,851,383 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B125,403,220 - 125,436,614 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B244,253,970 - 244,278,317 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B244,253,970 - 244,278,317 (-)EnsemblpanPan2panpan1.1
ILKAP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12548,666,850 - 48,689,405 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2548,666,849 - 48,689,381 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2549,162,771 - 49,185,336 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02549,052,924 - 49,075,502 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2549,052,925 - 49,075,569 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12548,928,074 - 48,950,661 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02548,716,721 - 48,739,506 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02548,948,767 - 48,971,334 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ilkap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303190,617,020 - 190,641,591 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936525303,499 - 322,563 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936525303,436 - 322,677 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ILKAP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15137,740,292 - 137,765,784 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.115137,740,291 - 137,765,758 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215152,222,010 - 152,247,435 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ILKAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110124,191,926 - 124,225,735 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10124,190,785 - 124,225,678 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604075,190,863 - 75,224,901 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ilkap
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248473,320,788 - 3,344,705 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248473,321,400 - 3,344,725 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Ilkap
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v14163,371,810 - 163,394,008 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ilkap
267 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:126
Count of miRNA genes:103
Interacting mature miRNAs:112
Transcripts:ENSRNOT00000027295
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)956047863101047863Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)963376862108376862Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)94445825699506504Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)965657365108376720Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)986720043110356905Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)986720043121768150Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)964220169109220169Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)944458256121768150Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)964220169109220169Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)964220169109220169Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)968875497121768150Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)983161999118999486Rat
4889852Pur26Proteinuria QTL 26150.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)985262459109044727Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)985262459118999486Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)948718864108376862Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)95450650499506504Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)964220169109220169Rat

Markers in Region
BF387256  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2991,966,738 - 91,966,892 (+)MAPPERmRatBN7.2
Rnor_6.0998,514,898 - 98,515,051NCBIRnor6.0
Rnor_5.0998,190,946 - 98,191,099UniSTSRnor5.0
RGSC_v3.4990,603,227 - 90,603,380UniSTSRGSC3.4
Celera989,507,761 - 89,507,914UniSTS
RH 3.4 Map9796.4UniSTS
Cytogenetic Map9q36UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000027295   ⟹   ENSRNOP00000027295
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl999,413,978 - 99,436,263 (-)Ensembl
mRatBN7.2 Ensembl991,966,452 - 91,988,753 (-)Ensembl
Rnor_6.0 Ensembl998,514,584 - 98,536,581 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000096782   ⟹   ENSRNOP00000077906
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl999,414,490 - 99,436,263 (-)Ensembl
mRatBN7.2 Ensembl991,966,953 - 91,988,753 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000115342   ⟹   ENSRNOP00000083927
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl991,966,441 - 91,982,769 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000119384   ⟹   ENSRNOP00000083940
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl999,413,978 - 99,436,418 (-)Ensembl
mRatBN7.2 Ensembl991,966,441 - 91,988,892 (-)Ensembl
RefSeq Acc Id: NM_022606   ⟹   NP_072128
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8999,413,998 - 99,436,262 (-)NCBI
mRatBN7.2991,966,461 - 91,988,725 (-)NCBI
Rnor_6.0998,514,620 - 98,536,586 (-)NCBI
Rnor_5.0998,190,668 - 98,212,634 (-)NCBI
RGSC_v3.4990,602,949 - 90,626,753 (-)RGD
Celera989,507,483 - 89,529,779 (-)RGD
Sequence:
RefSeq Acc Id: XM_039084169   ⟹   XP_038940097
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8999,413,981 - 99,428,278 (-)NCBI
mRatBN7.2991,966,440 - 91,988,697 (-)NCBI
RefSeq Acc Id: XM_039084170   ⟹   XP_038940098
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8999,413,981 - 99,428,278 (-)NCBI
mRatBN7.2991,966,440 - 91,988,791 (-)NCBI
RefSeq Acc Id: XM_063267686   ⟹   XP_063123756
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8999,413,981 - 99,428,262 (-)NCBI
RefSeq Acc Id: NP_072128   ⟸   NM_022606
- UniProtKB: Q9Z1Z6 (UniProtKB/Swiss-Prot),   Q6P6U8 (UniProtKB/Swiss-Prot),   A0A0G2JSS1 (UniProtKB/TrEMBL),   A6JQR2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000027295   ⟸   ENSRNOT00000027295
RefSeq Acc Id: XP_038940098   ⟸   XM_039084170
- Peptide Label: isoform X2
- UniProtKB: A6JQR3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940097   ⟸   XM_039084169
- Peptide Label: isoform X2
- UniProtKB: A6JQR3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000077906   ⟸   ENSRNOT00000096782
Ensembl Acc Id: ENSRNOP00000083940   ⟸   ENSRNOT00000119384
Ensembl Acc Id: ENSRNOP00000083927   ⟸   ENSRNOT00000115342
RefSeq Acc Id: XP_063123756   ⟸   XM_063267686
- Peptide Label: isoform X1
- UniProtKB: A6JQR1 (UniProtKB/TrEMBL),   A0A8I6GBB0 (UniProtKB/TrEMBL)
Protein Domains
PPM-type phosphatase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z1Z6-F1-model_v2 AlphaFold Q9Z1Z6 1-392 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696859
Promoter ID:EPDNEW_R7384
Type:initiation region
Name:Ilkap_1
Description:ILK associated serine/threonine phosphatase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0998,536,637 - 98,536,697EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620128 AgrOrtholog
BioCyc Gene G2FUF-26717 BioCyc
Ensembl Genes ENSRNOG00000020115 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000027295 ENTREZGENE
  ENSRNOT00000119384 ENTREZGENE
Gene3D-CATH 3.60.40.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:5621497 IMAGE-MGC_LOAD
InterPro PP2C UniProtKB/Swiss-Prot
  PP2C_BS UniProtKB/Swiss-Prot
  PPM-type_dom_sf UniProtKB/Swiss-Prot
  PPM-type_phosphatase_dom UniProtKB/Swiss-Prot
KEGG Report rno:64538 UniProtKB/Swiss-Prot
MGC_CLONE MGC:72440 IMAGE-MGC_LOAD
NCBI Gene 64538 ENTREZGENE
PANTHER PROTEIN PHOSPHATASE UniProtKB/Swiss-Prot
Pfam PP2C UniProtKB/Swiss-Prot
PhenoGen Ilkap PhenoGen
PROSITE PPM_1 UniProtKB/Swiss-Prot
  PPM_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000020115 RatGTEx
SMART PP2Cc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF81606 UniProtKB/Swiss-Prot
UniProt A0A0G2JSS1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5YCJ9_RAT UniProtKB/TrEMBL
  A0A8I6GBB0 ENTREZGENE, UniProtKB/TrEMBL
  A6JQR0_RAT UniProtKB/TrEMBL
  A6JQR1 ENTREZGENE, UniProtKB/TrEMBL
  A6JQR2 ENTREZGENE, UniProtKB/TrEMBL
  A6JQR3 ENTREZGENE, UniProtKB/TrEMBL
  A6JQR4_RAT UniProtKB/TrEMBL
  A6JQR5_RAT UniProtKB/TrEMBL
  A6JQR7_RAT UniProtKB/TrEMBL
  A6JQR8_RAT UniProtKB/TrEMBL
  A6JQR9_RAT UniProtKB/TrEMBL
  A6JQS0_RAT UniProtKB/TrEMBL
  ILKAP_RAT UniProtKB/Swiss-Prot
  Q6P6U8 ENTREZGENE
  Q9Z1Z6 ENTREZGENE
UniProt Secondary Q6P6U8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-02-01 Ilkap  ILK associated serine/threonine phosphatase  Ilkap  integrin-linked kinase-associated serine/threonine phosphatase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-08-02 Ilkap  integrin-linked kinase-associated serine/threonine phosphatase  Ilkap  integrin-linked kinase-associated serine/threonine phosphatase 2C  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Ilkap  integrin-linked kinase-associated serine/threonine phosphatase 2C  AF095927  protein phosphatase 2C  Symbol and Name updated 1299863 APPROVED
2002-08-07 AF095927  protein phosphatase 2C      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression widely expressed in all tissues 632254
gene_function recombinant protein purified from bacteria exhibited a potent Mn2+-dependent serine/threonine phosphatase activity 632254
gene_mutations_overexpression overexpression causes cell cycle arrest at early S phase and inhibition of DNA synthesis and leading to cell death 632254
gene_protein 392 amino acids 632254
gene_regulation expression induced by the addition of ethanol to the culture medium or UV irradiation of cells 632254