Advanced Search (OLGA)

Gene: Cdkl3 (cyclin-dependent kinase-like 3) Rattus norvegicus

Analyze

Symbol:

Cdkl3

Name:

cyclin-dependent kinase-like 3

RGD ID:

619874

Description:

Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within dendrite extension; negative regulation of axon extension; and positive regulation of dendrite morphogenesis. Located in cytoplasm and nucleus. Orthologous to human CDKL3 (cyclin dependent kinase like 3); INTERACTS WITH 1,3,5-trinitro-1,3,5-triazinane; 2,4-dinitrotoluene; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC103693326; LOC103694901; Nkiatre; Nkiatreb; serine/threonine kinase NKIATRE; serine/threonine kinase NKIATRE beta; serine/threonine protein kinase NKIATRE; uncharacterized LOC103693326

RGD Orthologs

Human

Mouse

Black Rat

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	36,755,413 - 36,850,197 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	36,764,377 - 36,878,660 (+)	Ensembl				GRCr8
mRatBN7.2	10	36,263,212 - 36,349,268 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	36,266,977 - 36,349,268 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	40,961,446 - 40,985,530 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	40,451,416 - 40,475,500 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	35,955,138 - 35,979,222 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	37,458,397 - 37,510,345 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	37,458,452 - 37,493,491 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	37,227,962 - 37,315,393 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	37,527,865 - 37,552,851 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	35,621,986 - 35,646,386 (+)	NCBI		Celera
Cytogenetic Map	10	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,3,5-trinitro-1,3,5-triazinane (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

acrylamide (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

atrazine (EXP,ISO)

bisphenol A (EXP)

choline (ISO)

cisplatin (ISO)

CU-O LINKAGE (ISO)

dexamethasone (ISO)

dichloroacetic acid (ISO)

dorsomorphin (ISO)

flavonoids (EXP)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

hydrogen peroxide (ISO)

indole-3-methanol (EXP)

indometacin (ISO)

L-methionine (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

N-nitrosodiethylamine (EXP)

nickel atom (ISO)

niclosamide (ISO)

okadaic acid (ISO)

ozone (ISO)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

thioacetamide (EXP)

Triptolide (ISO)

triptonide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

tunicamycin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

dendrite extension (IBA,IEA,IMP,ISO)

negative regulation of axon extension (IBA,IEA,IMP,ISO)

positive regulation of dendrite morphogenesis (IBA,IEA,IMP,ISO)

regulation of cell cycle (IEA)

Cellular Component

cytoplasm (IDA,IEA)

nucleus (IBA,IDA,IEA)

Molecular Function

ATP binding (IEA)

cyclin-dependent protein serine/threonine kinase activity (IEA)

kinase activity (IEA)

nucleotide binding (IEA)

protein binding (ISO)

protein kinase activity (IEA)

protein serine kinase activity (IEA)

protein serine/threonine kinase activity (IBA,IEA)

transferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	NKIATRE is a novel conserved cdc2-related kinase.	Haq R, etal., Genomics 2001 Jan 15;71(2):131-41.
3.	Non-syndromic mild mental retardation candidate gene CDKL3 regulates neuronal morphogenesis.	Liu Z, etal., Neurobiol Dis. 2010 Sep;39(3):242-51. doi: 10.1016/j.nbd.2010.03.015. Epub 2010 Mar 27.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:15057822

Genomics

Comparative Map Data

Cdkl3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	36,755,413 - 36,850,197 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	36,764,377 - 36,878,660 (+)	Ensembl				GRCr8
mRatBN7.2	10	36,263,212 - 36,349,268 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	36,266,977 - 36,349,268 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	40,961,446 - 40,985,530 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	40,451,416 - 40,475,500 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	35,955,138 - 35,979,222 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	37,458,397 - 37,510,345 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	37,458,452 - 37,493,491 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	37,227,962 - 37,315,393 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	37,527,865 - 37,552,851 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	35,621,986 - 35,646,386 (+)	NCBI		Celera
Cytogenetic Map	10	q22	NCBI

CDKL3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	134,283,345 - 134,371,624 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	134,286,350 - 134,371,047 (-)	Ensembl			hg38	GRCh38
GRCh37	5	133,634,115 - 133,706,734 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	133,671,591 - 133,730,113 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	5	133,671,590 - 133,730,113	NCBI
Celera	5	129,757,884 - 129,826,544 (-)	NCBI		Celera
Cytogenetic Map	5	q31.1	NCBI
HuRef	5	128,818,996 - 128,887,557 (-)	NCBI		HuRef
CHM1_1	5	133,066,750 - 133,135,396 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	134,806,646 - 134,895,410 (-)	NCBI		T2T-CHM13v2.0

Cdkl3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	51,891,694 - 51,980,605 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	51,895,048 - 51,980,611 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	52,000,842 - 52,089,778 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	52,004,221 - 52,089,784 (+)	Ensembl			mm10	GRCm38
MGSCv37	11	51,817,723 - 51,898,169 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	51,847,745 - 51,881,588 (+)	NCBI		MGSCv36	mm8
Celera	11	56,572,516 - 56,652,949 (+)	NCBI		Celera
Cytogenetic Map	11	B1.3	NCBI
cM Map	11	31.85	NCBI

Cdkl3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	34,594,027 - 34,677,927 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cdkl3
663 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	17
Count of miRNA genes:	17
Interacting mature miRNAs:	17
Transcripts:	ENSRNOT00000059040
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61441	Btemp1	Thermal response to stress QTL 1	4		body temperature trait (VT:0005535)	core body temperature (CMO:0001036)	10	35893451	64140567	Rat
152025229	Scl83	Serum cholesterol level QTL 83	4.33		blood cholesterol amount (VT:0000180)		10	36211556	69161158	Rat
1578779	Tcas10	Tongue tumor susceptibility QTL 10	3.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	10	31796281	76796281	Rat
631564	Apr3	Acute phase response QTL 3	3.9		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	10	15776754	60776754	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	27023535	98502431	Rat
2293669	Bmd33	Bone mineral density QTL 33	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck polar moment of inertia (CMO:0001670)	10	27443787	72443787	Rat
631552	Vetf2	Vascular elastic tissue fragility QTL 2	4.5	0.0002	aorta elastic tissue integrity trait (VT:0010556)	artery internal elastic lamina non-tumorous lesion count (CMO:0001913)	10	35509383	91417879	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1250554	64349221	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2293679	Bmd30	Bone mineral density QTL 30	3.5	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	27443787	72443787	Rat
1578761	Stresp21	Stress response QTL 21	3.3		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	6877142	51877142	Rat
2298544	Neuinf9	Neuroinflammation QTL 9	4.6		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	10	19939207	64939207	Rat
61332	Eau3	Experimental allergic uveoretinitis QTL 3		0.004	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	18035782	63035782	Rat
10401803	Kidm50	Kidney mass QTL 50			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	10	922197	45922197	Rat
2317754	Glom25	Glomerulus QTL 25	3.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	2103708	47103708	Rat
1598852	Anxrr19	Anxiety related response QTL 19	5.07		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	10	18668419	63668419	Rat
1581497	Esta1	Estrogen-induced thymic atrophy QTL 1			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	21833758	61843633	Rat
724527	Bp148	Blood pressure QTL 148		0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	28950353	73950353	Rat
2313095	Bss62	Bone structure and strength QTL 62	1.5	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	5893811	50893811	Rat
1358897	Stresp6	Stress response QTL 6	4.17	0.022	blood norepinephrine amount (VT:0005663)	plasma norepinephrine level (CMO:0001010)	10	35893263	64653589	Rat
1331762	Rf40	Renal function QTL 40	3.873		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	10	29800910	64653589	Rat
2300171	Bmd58	Bone mineral density QTL 58	4.9	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	10	27443787	72443787	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	14991535	86964295	Rat
2313104	Bss61	Bone structure and strength QTL 61	0.9	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	10	5893811	50893811	Rat
2293652	Bmd22	Bone mineral density QTL 22	4.9	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	27443787	72443787	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14991535	107556066	Rat
724556	Pur2	Proteinuria QTL 2	5.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	22931373	91127454	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6660923	73950353	Rat
2313066	Bss63	Bone structure and strength QTL 63	1.4	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	10	5893811	50893811	Rat
2313064	Bmd71	Bone mineral density QTL 71	0.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	10	5893811	50893811	Rat
70223	Bp57	Blood pressure QTL 57	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	14653541	59653541	Rat
1354587	Kidm21	Kidney mass QTL 21	3.3		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	10	15533012	73695498	Rat
634329	Pia15	Pristane induced arthritis QTL 15	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	24662123	73695339	Rat
70224	Eae3	Experimental allergic encephalomyelitis QTL 3	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	10	27023535	61843633	Rat
2298480	Eau7	Experimental allergic uveoretinitis QTL 7		0.0049	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	35509383	80509383	Rat
2313081	Bss64	Bone structure and strength QTL 64	1.3	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	10	5893811	50893811	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	29800910	91417879	Rat
2298495	Eae23	Experimental allergic encephalomyelitis QTL 23	16.93		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis duration (CMO:0001424)	10	16175525	61175525	Rat
2313087	Bmd80	Bone mineral density QTL 80	3.2	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	10	20110614	65110614	Rat
634327	Hc4	Hypercalciuria QTL 4	2.4		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	10	1	38832698	Rat
1354614	Hpcl1	Hepatic cholesterol level QTL 1	3.3		liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	35893263	52293000	Rat
2289985	Bp305	Blood pressure QTL 305			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	29076978	74076978	Rat
631530	Tls3	T-lymphoma susceptibility QTL 3	0	0.0001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	10	27587226	96099902	Rat
631532	Cm50	Cardiac mass QTL 50	6.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	10	18035782	63035782	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
1600371	Mcs21	Mammary carcinoma susceptibility QTL 21	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	10	29377046	52699134	Rat
2293705	Bmd25	Bone mineral density QTL 25	7.1	0.0001	femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	10	27443787	72443787	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14991535	107713808	Rat
1576311	Pia26	Pristane induced arthritis QTL 26			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	31129113	76129113	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
6893342	Cm78	Cardiac mass QTL 78	0.1	0.88	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	35509383	88177745	Rat
2313055	Bw96	Body weight QTL 96	3.6	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	10	20110614	65110614	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	27023535	99451848	Rat

Markers in Region

RH132769

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	36,267,163 - 36,267,366 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	37,458,677 - 37,458,879	NCBI	Rnor6.0
Rnor_5.0	10	37,231,787 - 37,231,989	UniSTS	Rnor5.0
RGSC_v3.4	10	37,528,052 - 37,528,254	UniSTS	RGSC3.4
Celera	10	35,622,173 - 35,622,375	UniSTS
RH 3.4 Map	10	390.5	UniSTS
Cytogenetic Map	10	q22	UniSTS

RH133033

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	36,302,574 - 36,302,768 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	37,494,122 - 37,494,315	NCBI	Rnor6.0
Rnor_5.0	10	37,268,701 - 37,268,894	UniSTS	Rnor5.0
RGSC_v3.4	10	37,564,834 - 37,565,027	UniSTS	RGSC3.4
Celera	10	35,657,659 - 35,657,852	UniSTS
RH 3.4 Map	10	387.2	UniSTS
Cytogenetic Map	10	q22	UniSTS

AU049026

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	36,280,983 - 36,281,214 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	37,472,495 - 37,472,725	NCBI	Rnor6.0
Rnor_5.0	10	37,245,886 - 37,246,117	NCBI	Rnor5.0
RGSC_v3.4	10	37,541,870 - 37,542,100	UniSTS	RGSC3.4
Celera	10	35,635,961 - 35,636,191	UniSTS
Cytogenetic Map	10	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
19	13	103	226	108	111	63	102	63	6	450	243	11	199	115	132	48	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_021772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006246323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006246325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006246326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006246329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006246332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006246333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773889	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597503	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086735	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269756	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269763	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005489935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005489936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010055232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010055233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010055234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010055235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010055236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_597993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AABR07024291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01063836	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01063837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01063838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC091229	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC130253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF112183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF112184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AW523244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BI296078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000079411 ⟹ ENSRNOP00000072310

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	36,764,377 - 36,802,965 (+)	Ensembl
mRatBN7.2 Ensembl	10	36,266,977 - 36,302,432 (+)	Ensembl
Rnor_6.0 Ensembl	10	37,458,452 - 37,493,491 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000079985 ⟹ ENSRNOP00000071286

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	36,767,885 - 36,878,660 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085895 ⟹ ENSRNOP00000073449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	36,767,776 - 36,850,197 (+)	Ensembl
mRatBN7.2 Ensembl	10	36,266,977 - 36,349,268 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087152 ⟹ ENSRNOP00000068841

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	36,764,377 - 36,805,038 (+)	Ensembl
mRatBN7.2 Ensembl	10	36,266,977 - 36,304,109 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098640 ⟹ ENSRNOP00000091215

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	36,764,377 - 36,845,502 (+)	Ensembl
mRatBN7.2 Ensembl	10	36,266,977 - 36,344,571 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099737 ⟹ ENSRNOP00000084767

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	36,767,800 - 36,803,851 (+)	Ensembl
mRatBN7.2 Ensembl	10	36,266,984 - 36,302,946 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102740 ⟹ ENSRNOP00000082633

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	36,767,883 - 36,811,912 (+)	Ensembl
mRatBN7.2 Ensembl	10	36,266,977 - 36,310,602 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113693 ⟹ ENSRNOP00000096533

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	36,764,377 - 36,810,088 (+)	Ensembl
mRatBN7.2 Ensembl	10	36,266,977 - 36,310,602 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000120278 ⟹ ENSRNOP00000094552

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	36,764,377 - 36,798,569 (+)	Ensembl
mRatBN7.2 Ensembl	10	36,266,977 - 36,296,776 (+)	Ensembl

RefSeq Acc Id:

NM_021772 ⟹ NP_068540

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,767,908 - 36,792,231 (+)	NCBI
mRatBN7.2	10	36,266,977 - 36,291,302 (+)	NCBI
Rnor_6.0	10	37,458,490 - 37,482,849 (+)	NCBI
Rnor_5.0	10	37,227,962 - 37,315,393 (+)	NCBI
RGSC_v3.4	10	37,527,865 - 37,552,851 (+)	RGD
Celera	10	35,621,986 - 35,646,386 (+)	NCBI

Sequence:

show sequence

CAAGGTCGGCCAGGACTGGAGGTGTGGTGTCCCGCGTCCGGCTGGGACTTCCACGCAGCCGGGC
CGGCGGGACTACAGGATGGGCTGAGGCGGCGGCGATTCTCAGGACGAGAAGCCAGGCTTGAAAA
TGGAGATGTATGAAACCCTTGGAAAAGTAGGAGAGGGAAGTTATGGAACGGTCATGAAATGCAA
GCATAAGGATACTGGGCGGATAGTGGCCATTAAGATATTCTATGAGAAACCAGAAAAATCTGTC
AACAAAATTGCAACGAGAGAAATAAAGTTTCTAAAGCAATTTCGTCATGAAAACCTGGTCAATC
TGATTGAAGTTTTTAGACAAAAAAAGAAAATCCATTTGGTATTTGAGTTTATTGACCACACGGT
CTTAGATGAGTTACAGCATTATTGTCACGGATTAGAGAGTAAGCGACTAAGAAAGTACCTGTTC
CAGATCCTCCGAGCGATCGAGTATCTGCACAACAACAACATTATCCACCGAGATATAAAGCCTG
AGAATATTTTAGTCTCCCAGTCAGGAATTACAAAGCTCTGCGATTTTGGGTTTGCGCGGACACT
AGCAGCTCCTGGAGACGTTTACACAGACTACGTGGCCACCCGCTGGTACAGAGCTCCAGAGCTG
GTGTTGAAAGACACCACCTATGGAAAACCAGTGGATATCTGGGCTTTGGGCTGTATGATCATTG
AAATGGCCACTGGCAATCCCTACCTTCCTAGCAGTTCCGATTTGGATTTGCTCCACAAGATTGT
TTTAAAAGTAGGCAACCTGACCCCGCACCTGCACAATATTTTTTCCAAGAGTCCCATCTTTGCT
GGGGTGGTTCTTCCTCAAGTTCAACATCCCAAAAACGCAAGAAAGAAATACCCAAAGCTCAACG
GATTGCTGGCAGATATAGTTCATGCTTGTTTACAAATTGATCCTGCTGAGAGGATATCATCCAC
CGATCTTTTGCATCACGATTACTTTACTAGAGATGGATTTATTGAGAAATTTATACCAGAGCTG
AGAGCTAAGTTATTACAGGAAGCAAAGGTTAATTCATTTATAAAGCCAAAAGAGAATTTTAAGG
AAAATGAACCTGTGAGAGATGAGAAAAAACCAGTTTTTACCAACCCTCTGCTCTATGGAAACCC
AACACTTTATGGAAAGGAAGTGGACAGAGACAAAAGGGCCAAGGAGCTCAAAGTCAGAGTCATT
AAGGCCAAAGGGGGAAAAGGAGACGTCCCAGACCTGAAGAAGACAGAGAGTGAAGGTGAACACC
GCCAGCAGGGCACAGCTGAGGACACACACCCCACATCACTGGACAGGAAGCCTTCTGTCTCGGA
ACTAACAAACCCTGTCCATCCCAGTGCGAATTCTGACACTGTCAAAGAAGACCCACACTCTGGG
GGCTGTATGATAATGCCACCTATCAACCTGACAAGCAGTAATTTGTTGGCCGCAAATCCCAGTT
CAAACCTCTCCCACCCCAATTCACGGTGAGCTAGAGTGAGAGGAGGCTTGATTAAGTAAGGCGT
CCTCCTGTGCGGCGCATTGCAGACACACGTGTACGATGTCAGTATGGACCGGACCTGAAAAGGA
TCTTCTCAAGTTGCAGTCAAGTAGTAACAGGGCATTCCCTGAGGAGTTCTTGGGAATGTTATGT
GAGAAGTGTTTTTCTTAGCTATATAGGTATTAAACTTTTTTTTGAGACAAATTGCCACAGAGCC
CAG

hide sequence

RefSeq Acc Id:

XM_008773883 ⟹ XP_008772105

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,833,314 (+)	NCBI
mRatBN7.2	10	36,266,889 - 36,311,829 (+)	NCBI

Sequence:

show sequence

ACCCCAGCGATTTCCAGTCTTGCGTACTGTGCTCCGAACGCCTCAGGTCCCGCCCCCACCCGGT
TGCCAGGGCATCCGGCTGCCCGGAGCGGGCAAGGTCGGCCAGGACTGGAGGTGTGGTGTCCCGC
GTCCGGCTGGGACTTCCACGCAGCCGGGCCGGCGGGACTACAGGATGGGCTGAGGCGGCGGCGA
TTCTCAGGACGAGGTCCACAGCGCGGCGAGACGGGCCACTCGGGTTGGGGCTGCACAGACTGTG
TTTGAGAAGAGGGCAGGACGTATGGGTGACTGTAGTGCTGAGAAGCCAGGCTTGAAAATGGAGA
TGTATGAAACCCTTGGAAAAGTAGGAGAGGGAAGTTATGGAACGGTCATGAAATGCAAGCATAA
GGATACTGGGCGGATAGTGGCCATTAAGATATTCTATGAGAAACCAGAAAAATCTGTCAACAAA
ATTGCAACGAGAGAAATAAAGTTTCTAAAGCAATTTCGTCATGAAAACCTGGTCAATCTGATTG
AAGTTTTTAGACAAAAAAAGAAAATCCATTTGGTATTTGAGTTTATTGACCACACGGTCTTAGA
TGAGTTACAGCATTATTGTCACGGATTAGAGAGTAAGCGACTAAGAAAGTACCTGTTCCAGATC
CTCCGAGCGATCGAGTATCTGCACAACAACAACATTATCCACCGAGATATAAAGCCTGAGAATA
TTTTAGTCTCCCAGTCAGGAATTACAAAGCTCTGCGATTTTGGGTTTGCGCGGACACTAGCAGC
TCCTGGAGACGTTTACACAGACTACGTGGCCACCCGCTGGTACAGAGCTCCAGAGCTGGTGTTG
AAAGACACCACCTATGGAAAACCAGTGGATATCTGGGCTTTGGGCTGTATGATCATTGAAATGG
CCACTGGCAATCCCTACCTTCCTAGCAGTTCCGATTTGGATTTGCTCCACAAGATTGTTTTAAA
AGTAGGCAACCTGACCCCGCACCTGCACAATATTTTTTCCAAGAGTCCCATCTTTGCTGGGGTG
GTTCTTCCTCAAGTTCAACATCCCAAAAACGCAAGAAAGAAATACCCAAAGCTCAACGGATTGC
TGGCAGATATAGTTCATGCTTGTTTACAAATTGATCCTGCTGAGAGGATATCATCCACCGATCT
TTTGCATCACGATTACTTTACTAGAGATGGATTTATTGAGAAATTTATACCAGAGCTGAGAGCT
AAGTTATTACAGGAAGCAAAGGTTAATTCATTTATAAAGCCAAAAGAGAATTTTAAGGAAAATG
AACCTGTGAGAGATGAGAAAAAACCAGTTTTTACCAACCCTCTGCTCTATGGAAACCCAACACT
TTATGGAAAGGAAGTGGACAGAGACAAAAGGGCCAAGGAGCTCAAAGTCAGAGTCATTAAGGCC
AAAGGGGGAAAAGGAGACGTCCCAGACCTGAAGAAGACAGAGAGTGAAGGTGAACACCGCCAGC
AGGGCACAGCTGAGGACACACACCCCACATCACTGGACAGGAAGCCTTCTGTCTCGGAACTAAC
AAACCCTGTCCATCCCAGTGCGAATTCTGACACTGTCAAAGAAGACCCACACTCTGGGGGCTGT
ATGATAATGCCACCTATCAACCTGACAAGCAGTAATTTGTTGGCCGCAAATCCCAGTTCAAACC
TCTCCCACCCCAATTCACGGTTAACTGAAAGAACAAAAAAGAGACGCACCTCTTCACAAACTAT
TGGACAAACTTTGTCTAATAGCAGACAAGAGGACACAGGTCCCACACAAGTCCAAACAGAGAAA
GGTGCATTTAATGAGCGAACAGGTCAGAATGACCAAATAGCAAGTGGAAACAAAAGAAAACTGA
ATTTTTCCAAATGCGACAGGAAAGAATTCCATTTCCCTGAGCTGCCGTTCACAATACAGGCGAA
GGAGATGAAAGGGATGGAGGTTAAACAGATAAAAGTGCTGAAGAGAGAATCAAAGAAAACGGAT
TCACCTAAAATACCAACTTTACTTAGTATGGACTCAAATCAAGAAAAACAAGAGGTACAGCTGT
GCGGAGTCTGCCCCTCTGCGAGCTCCCTCCAGCCAGCCAGCGAGGTGATCATTTGCTGCTTGTG
CAGTCAGGGGAATGGTTGTGAGAGGCAATCATTTTGTTTGTTCATTTTCCCCAAGCTACTTGAC
TGCAGTGGACCCTGCCCTTTGAAGATGTCTCTTGTCTCAGTTCCATGATTCTCCCTGGCTTGAA
ACTTGGCACCAACTTGATACTTTTCAGTCTCCAAGTGTCTGATAGCCATTTCAGCAGCAGGCCT
ACTTAATTTATTCTTGCTGTAACATTCTGGTTCCAGAAAATTATATTAGTTTTTCCTAGTCATC
TCTTTTTTCCTCCAGATTCTCACTTTTATTTTTTTTAACTGTTTCACGTCCTGTTTTGTGATAC
AAGTTACCTCTTAATTTGTTTGTTCTCAACTAGCCTCAAATTGCCTTCTGTTAAATGTTGTTTA
TGTGTGATAAAGGTCTGCATTATTATGCTCAGTTGTGGTATCAGTCAGTGGTCCCCAGACAAGC
AGAACAAACGGGATAGGATGTTCTAAGAGTAGGCTCCTTAGCTTCGCTCTCATCGGCAGAAGCT
GAGCTGCACAGAGGCCATCTGCACACTGGAAAACCAGGGAACATTGGTGGCTCTAGGAAGCTGG
AAACCTCAGCACAAGAGACATATGTGCCATAGTCTGAGGCCAAATGCCTGGACGTCCCAAGGAG
CTGCTGGTGCACATCTGTACTTAGAGGCTGAAGCACCAAACATTCATAGGAAACAGAAGTGGCA
AAACCCACCTCCACTCAGGAAGGATCAAGCATGCAATTGCCAGCTTCCCACTTCTCCTTTTTGC
TTTGTCGGTCTCCTGCCTATTGGATATCACCTGAGTTAATGGTTGGTCTTCTCTAGAAAGAAGC
TCACTCCATCAAGTCAGCTTGACAGCCATACTAGTCATCAACATTCCCCAAAGAGAGGATATAG
AAAATGAACACAAAAACAGTGACAAATAACTTCAATATGTCAGTAATTTTAAAAAATTCCCTAG
AGTTGACAGGTTGTTTAAGCAGATAAAGGCACTTACAACCTGAGTTTGATTCCTGGGAGCCCTC
TGGTCAGCCATCTACTGACCTTCACATACATACGGGATATACGTATGTGCGCATGCACACACAT
GGGCACACACACACACACATCACACATACATGCACACACACAATCACAAAATAATAAGATAGAT
AAATGGGATAAGAATTTTATAATTAGCTAAGGTATAAATATAAAATGTAAGGAAGTGAGAACTG
CTGCCACAATTCATAAAATATTAGAACACAAAAT

hide sequence

RefSeq Acc Id:

XM_008773884 ⟹ XP_008772106

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,833,314 (+)	NCBI
mRatBN7.2	10	36,266,891 - 36,311,827 (+)	NCBI

Sequence:

show sequence

CCCCAGCGATTTCCAGTCTTGCGTACTGTGCTCCGAACGCCTCAGGTCCCGCCCCCACCCGGTT
GCCAGGGCATCCGGCTGCCCGGAGCGGGCAAGGTCGGCCAGGACTGGAGGTGTGGTGTCCCGCG
TCCGGCTGGGACTTCCACGCAGCCGGGCCGGCGGGACTACAGGATGGGCTGAGGCGGCGGCGAT
TCTCAGGACGAGAAGCCAGGCTTGAAAATGGAGATGTATGAAACCCTTGGAAAAGTAGGAGAGG
GAAGTTATGGAACGGTCATGAAATGCAAGCATAAGGATACTGGGCGGATAGTGGCCATTAAGAT
ATTCTATGAGAAACCAGAAAAATCTGTCAACAAAATTGCAACGAGAGAAATAAAGTTTCTAAAG
CAATTTCGTCATGAAAACCTGGTCAATCTGATTGAAGTTTTTAGACAAAAAAAGAAAATCCATT
TGGTATTTGAGTTTATTGACCACACGGTCTTAGATGAGTTACAGCATTATTGTCACGGATTAGA
GAGTAAGCGACTAAGAAAGTACCTGTTCCAGATCCTCCGAGCGATCGAGTATCTGCACAACAAC
AACATTATCCACCGAGATATAAAGCCTGAGAATATTTTAGTCTCCCAGTCAGGAATTACAAAGC
TCTGCGATTTTGGGTTTGCGCGGACACTAGCAGCTCCTGGAGACGTTTACACAGACTACGTGGC
CACCCGCTGGTACAGAGCTCCAGAGCTGGTGTTGAAAGACACCACCTATGGAAAACCAGTGGAT
ATCTGGGCTTTGGGCTGTATGATCATTGAAATGGCCACTGGCAATCCCTACCTTCCTAGCAGTT
CCGATTTGGATTTGCTCCACAAGATTGTTTTAAAAGTAGGCAACCTGACCCCGCACCTGCACAA
TATTTTTTCCAAGAGTCCCATCTTTGCTGGGGTGGTTCTTCCTCAAGTTCAACATCCCAAAAAC
GCAAGAAAGAAATACCCAAAGCTCAACGGATTGCTGGCAGATATAGTTCATGCTTGTTTACAAA
TTGATCCTGCTGAGAGGATATCATCCACCGATCTTTTGCATCACGATTACTTTACTAGAGATGG
ATTTATTGAGAAATTTATACCAGAGCTGAGAGCTAAGTTATTACAGGAAGCAAAGGTTAATTCA
TTTATAAAGCCAAAAGAGAATTTTAAGGAAAATGAACCTGTGAGAGATGAGAAAAAACCAGTTT
TTACCAACCCTCTGCTCTATGGAAACCCAACACTTTATGGAAAGGAAGTGGACAGAGACAAAAG
GGCCAAGGAGCTCAAAGTCAGAGTCATTAAGGCCAAAGGGGGAAAAGGAGACGTCCCAGACCTG
AAGAAGACAGAGAGTGAAGGTGAACACCGCCAGCAGGGCACAGCTGAGGACACACACCCCACAT
CACTGGACAGGAAGCCTTCTGTCTCGGAACTAACAAACCCTGTCCATCCCAGTGCGAATTCTGA
CACTGTCAAAGAAGACCCACACTCTGGGGGCTGTATGATAATGCCACCTATCAACCTGACAAGC
AGTAATTTGTTGGCCGCAAATCCCAGTTCAAACCTCTCCCACCCCAATTCACGGTTAACTGAAA
GAACAAAAAAGAGACGCACCTCTTCACAAACTATTGGACAAACTTTGTCTAATAGCAGACAAGA
GGACACAGGTCCCACACAAGTCCAAACAGAGAAAGGTGCATTTAATGAGCGAACAGGTCAGAAT
GACCAAATAGCAAGTGGAAACAAAAGAAAACTGAATTTTTCCAAATGCGACAGGAAAGAATTCC
ATTTCCCTGAGCTGCCGTTCACAATACAGGCGAAGGAGATGAAAGGGATGGAGGTTAAACAGAT
AAAAGTGCTGAAGAGAGAATCAAAGAAAACGGATTCACCTAAAATACCAACTTTACTTAGTATG
GACTCAAATCAAGAAAAACAAGAGGTACAGCTGTGCGGAGTCTGCCCCTCTGCGAGCTCCCTCC
AGCCAGCCAGCGAGGTGATCATTTGCTGCTTGTGCAGTCAGGGGAATGGTTGTGAGAGGCAATC
ATTTTGTTTGTTCATTTTCCCCAAGCTACTTGACTGCAGTGGACCCTGCCCTTTGAAGATGTCT
CTTGTCTCAGTTCCATGATTCTCCCTGGCTTGAAACTTGGCACCAACTTGATACTTTTCAGTCT
CCAAGTGTCTGATAGCCATTTCAGCAGCAGGCCTACTTAATTTATTCTTGCTGTAACATTCTGG
TTCCAGAAAATTATATTAGTTTTTCCTAGTCATCTCTTTTTTCCTCCAGATTCTCACTTTTATT
TTTTTTAACTGTTTCACGTCCTGTTTTGTGATACAAGTTACCTCTTAATTTGTTTGTTCTCAAC
TAGCCTCAAATTGCCTTCTGTTAAATGTTGTTTATGTGTGATAAAGGTCTGCATTATTATGCTC
AGTTGTGGTATCAGTCAGTGGTCCCCAGACAAGCAGAACAAACGGGATAGGATGTTCTAAGAGT
AGGCTCCTTAGCTTCGCTCTCATCGGCAGAAGCTGAGCTGCACAGAGGCCATCTGCACACTGGA
AAACCAGGGAACATTGGTGGCTCTAGGAAGCTGGAAACCTCAGCACAAGAGACATATGTGCCAT
AGTCTGAGGCCAAATGCCTGGACGTCCCAAGGAGCTGCTGGTGCACATCTGTACTTAGAGGCTG
AAGCACCAAACATTCATAGGAAACAGAAGTGGCAAAACCCACCTCCACTCAGGAAGGATCAAGC
ATGCAATTGCCAGCTTCCCACTTCTCCTTTTTGCTTTGTCGGTCTCCTGCCTATTGGATATCAC
CTGAGTTAATGGTTGGTCTTCTCTAGAAAGAAGCTCACTCCATCAAGTCAGCTTGACAGCCATA
CTAGTCATCAACATTCCCCAAAGAGAGGATATAGAAAATGAACACAAAAACAGTGACAAATAAC
TTCAATATGTCAGTAATTTTAAAAAATTCCCTAGAGTTGACAGGTTGTTTAAGCAGATAAAGGC
ACTTACAACCTGAGTTTGATTCCTGGGAGCCCTCTGGTCAGCCATCTACTGACCTTCACATACA
TACGGGATATACGTATGTGCGCATGCACACACATGGGCACACACACACACACATCACACATACA
TGCACACACACAATCACAAAATAATAAGATAGATAAATGGGATAAGAATTTTATAATTAGCTAA
GGTATAAATATAAAATGTAAGGAAGTGAGAACTGCTGCCACAATTCATAAAATATTAGAACACA
AAAT

hide sequence

RefSeq Acc Id:

XM_008773885 ⟹ XP_008772107

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,833,314 (+)	NCBI
mRatBN7.2	10	36,266,888 - 36,311,829 (+)	NCBI

Sequence:

show sequence

ACCCCAGCGATTTCCAGTCTTGCGTACTGTGCTCCGAACGCCTCAGGTCCCGCCCCCACCCGGT
TGCCAGGGCATCCGGCTGCCCGGAGCGGGCAAGGTCGGCCAGGACTGGAGGTGTGGTGTCCCGC
GTCCGGCTGGGACTTCCACGCAGCCGGGCCGGCGGGACTACAGGATGGGCTGAGGCGGCGGCGA
TTCTCAGGACGAGGTCCACAGCGCGGCGAGACGGGCCACTCGGGTTGGGGCTGCACAGACTGTG
TTTGAGAAGAGGGCAGGACGTATGGGTGACTGTAGTGCTGAGTAGAAGCCAGGCTTGAAAATGG
AGATGTATGAAACCCTTGGAAAAGTAGGAGAGGGAAGTTATGGAACGGTCATGAAATGCAAGCA
TAAGGATACTGGGCGGATAGTGGCCATTAAGATATTCTATGAGAAACCAGAAAAATCTGTCAAC
AAAATTGCAACGAGAGAAATAAAGTTTCTAAAGCAATTTCGTCATGAAAACCTGGTCAATCTGA
TTGAAGTTTTTAGACAAAAAAAGAAAATCCATTTGGTATTTGAGTTTATTGACCACACGGTCTT
AGATGAGTTACAGCATTATTGTCACGGATTAGAGAGTAAGCGACTAAGAAAGTACCTGTTCCAG
ATCCTCCGAGCGATCGAGTATCTGCACAACAACAACATTATCCACCGAGATATAAAGCCTGAGA
ATATTTTAGTCTCCCAGTCAGGAATTACAAAGCTCTGCGATTTTGGGTTTGCGCGGACACTAGC
AGCTCCTGGAGACGTTTACACAGACTACGTGGCCACCCGCTGGTACAGAGCTCCAGAGCTGGTG
TTGAAAGACACCACCTATGGAAAACCAGTGGATATCTGGGCTTTGGGCTGTATGATCATTGAAA
TGGCCACTGGCAATCCCTACCTTCCTAGCAGTTCCGATTTGGATTTGCTCCACAAGATTGTTTT
AAAAGTAGGCAACCTGACCCCGCACCTGCACAATATTTTTTCCAAGAGTCCCATCTTTGCTGGG
GTGGTTCTTCCTCAAGTTCAACATCCCAAAAACGCAAGAAAGAAATACCCAAAGCTCAACGGAT
TGCTGGCAGATATAGTTCATGCTTGTTTACAAATTGATCCTGCTGAGAGGATATCATCCACCGA
TCTTTTGCATCACGATTACTTTACTAGAGATGGATTTATTGAGAAATTTATACCAGAGCTGAGA
GCTAAGTTATTACAGGAAGCAAAGGTTAATTCATTTATAAAGCCAAAAGAGAATTTTAAGGAAA
ATGAACCTGTGAGAGATGAGAAAAAACCAGTTTTTACCAACCCTCTGCTCTATGGAAACCCAAC
ACTTTATGGAAAGGAAGTGGACAGAGACAAAAGGGCCAAGGAGCTCAAAGTCAGAGTCATTAAG
GCCAAAGGGGGAAAAGGAGACGTCCCAGACCTGAAGAAGACAGAGAGTGAAGGTGAACACCGCC
AGCAGGGCACAGCTGAGGACACACACCCCACATCACTGGACAGGAAGCCTTCTGTCTCGGAACT
AACAAACCCTGTCCATCCCAGTGCGAATTCTGACACTGTCAAAGAAGACCCACACTCTGGGGGC
TGTATGATAATGCCACCTATCAACCTGACAAGCAGTAATTTGTTGGCCGCAAATCCCAGTTCAA
ACCTCTCCCACCCCAATTCACGGTTAACTGAAAGAACAAAAAAGAGACGCACCTCTTCACAAAC
TATTGGACAAACTTTGTCTAATAGCAGACAAGAGGACACAGGTCCCACACAAGTCCAAACAGAG
AAAGGTGCATTTAATGAGCGAACAGGTCAGAATGACCAAATAGCAAGTGGAAACAAAAGAAAAC
TGAATTTTTCCAAATGCGACAGGAAAGAATTCCATTTCCCTGAGCTGCCGTTCACAATACAGGC
GAAGGAGATGAAAGGGATGGAGGTTAAACAGATAAAAGTGCTGAAGAGAGAATCAAAGAAAACG
GATTCACCTAAAATACCAACTTTACTTAGTATGGACTCAAATCAAGAAAAACAAGAGGTACAGC
TGTGCGGAGTCTGCCCCTCTGCGAGCTCCCTCCAGCCAGCCAGCGAGGTGATCATTTGCTGCTT
GTGCAGTCAGGGGAATGGTTGTGAGAGGCAATCATTTTGTTTGTTCATTTTCCCCAAGCTACTT
GACTGCAGTGGACCCTGCCCTTTGAAGATGTCTCTTGTCTCAGTTCCATGATTCTCCCTGGCTT
GAAACTTGGCACCAACTTGATACTTTTCAGTCTCCAAGTGTCTGATAGCCATTTCAGCAGCAGG
CCTACTTAATTTATTCTTGCTGTAACATTCTGGTTCCAGAAAATTATATTAGTTTTTCCTAGTC
ATCTCTTTTTTCCTCCAGATTCTCACTTTTATTTTTTTTAACTGTTTCACGTCCTGTTTTGTGA
TACAAGTTACCTCTTAATTTGTTTGTTCTCAACTAGCCTCAAATTGCCTTCTGTTAAATGTTGT
TTATGTGTGATAAAGGTCTGCATTATTATGCTCAGTTGTGGTATCAGTCAGTGGTCCCCAGACA
AGCAGAACAAACGGGATAGGATGTTCTAAGAGTAGGCTCCTTAGCTTCGCTCTCATCGGCAGAA
GCTGAGCTGCACAGAGGCCATCTGCACACTGGAAAACCAGGGAACATTGGTGGCTCTAGGAAGC
TGGAAACCTCAGCACAAGAGACATATGTGCCATAGTCTGAGGCCAAATGCCTGGACGTCCCAAG
GAGCTGCTGGTGCACATCTGTACTTAGAGGCTGAAGCACCAAACATTCATAGGAAACAGAAGTG
GCAAAACCCACCTCCACTCAGGAAGGATCAAGCATGCAATTGCCAGCTTCCCACTTCTCCTTTT
TGCTTTGTCGGTCTCCTGCCTATTGGATATCACCTGAGTTAATGGTTGGTCTTCTCTAGAAAGA
AGCTCACTCCATCAAGTCAGCTTGACAGCCATACTAGTCATCAACATTCCCCAAAGAGAGGATA
TAGAAAATGAACACAAAAACAGTGACAAATAACTTCAATATGTCAGTAATTTTAAAAAATTCCC
TAGAGTTGACAGGTTGTTTAAGCAGATAAAGGCACTTACAACCTGAGTTTGATTCCTGGGAGCC
CTCTGGTCAGCCATCTACTGACCTTCACATACATACGGGATATACGTATGTGCGCATGCACACA
CATGGGCACACACACACACACATCACACATACATGCACACACACAATCACAAAATAATAAGATA
GATAAATGGGATAAGAATTTTATAATTAGCTAAGGTATAAATATAAAATGTAAGGAAGTGAGAA
CTGCTGCCACAATTCATAAAATATTAGAACACAAAAT

hide sequence

RefSeq Acc Id:

XM_008773886 ⟹ XP_008772108

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,833,314 (+)	NCBI
mRatBN7.2	10	36,266,889 - 36,311,828 (+)	NCBI

Sequence:

show sequence

ACCCCAGCGATTTCCAGTCTTGCGTACTGTGCTCCGAACGCCTCAGGTCCCGCCCCCACCCGGT
TGCCAGGGCATCCGGCTGCCCGGAGCGGGCAAGGTCGGCCAGGACTGGAGGTGTGGTGTCCCGC
GTCCGGCTGGGACTTCCACGCAGCCGGGCCGGCGGGACTACAGGATGGGCTGAGGCGGCGGCGA
TTCTCAGGACGAGTAGAAGCCAGGCTTGAAAATGGAGATGTATGAAACCCTTGGAAAAGTAGGA
GAGGGAAGTTATGGAACGGTCATGAAATGCAAGCATAAGGATACTGGGCGGATAGTGGCCATTA
AGATATTCTATGAGAAACCAGAAAAATCTGTCAACAAAATTGCAACGAGAGAAATAAAGTTTCT
AAAGCAATTTCGTCATGAAAACCTGGTCAATCTGATTGAAGTTTTTAGACAAAAAAAGAAAATC
CATTTGGTATTTGAGTTTATTGACCACACGGTCTTAGATGAGTTACAGCATTATTGTCACGGAT
TAGAGAGTAAGCGACTAAGAAAGTACCTGTTCCAGATCCTCCGAGCGATCGAGTATCTGCACAA
CAACAACATTATCCACCGAGATATAAAGCCTGAGAATATTTTAGTCTCCCAGTCAGGAATTACA
AAGCTCTGCGATTTTGGGTTTGCGCGGACACTAGCAGCTCCTGGAGACGTTTACACAGACTACG
TGGCCACCCGCTGGTACAGAGCTCCAGAGCTGGTGTTGAAAGACACCACCTATGGAAAACCAGT
GGATATCTGGGCTTTGGGCTGTATGATCATTGAAATGGCCACTGGCAATCCCTACCTTCCTAGC
AGTTCCGATTTGGATTTGCTCCACAAGATTGTTTTAAAAGTAGGCAACCTGACCCCGCACCTGC
ACAATATTTTTTCCAAGAGTCCCATCTTTGCTGGGGTGGTTCTTCCTCAAGTTCAACATCCCAA
AAACGCAAGAAAGAAATACCCAAAGCTCAACGGATTGCTGGCAGATATAGTTCATGCTTGTTTA
CAAATTGATCCTGCTGAGAGGATATCATCCACCGATCTTTTGCATCACGATTACTTTACTAGAG
ATGGATTTATTGAGAAATTTATACCAGAGCTGAGAGCTAAGTTATTACAGGAAGCAAAGGTTAA
TTCATTTATAAAGCCAAAAGAGAATTTTAAGGAAAATGAACCTGTGAGAGATGAGAAAAAACCA
GTTTTTACCAACCCTCTGCTCTATGGAAACCCAACACTTTATGGAAAGGAAGTGGACAGAGACA
AAAGGGCCAAGGAGCTCAAAGTCAGAGTCATTAAGGCCAAAGGGGGAAAAGGAGACGTCCCAGA
CCTGAAGAAGACAGAGAGTGAAGGTGAACACCGCCAGCAGGGCACAGCTGAGGACACACACCCC
ACATCACTGGACAGGAAGCCTTCTGTCTCGGAACTAACAAACCCTGTCCATCCCAGTGCGAATT
CTGACACTGTCAAAGAAGACCCACACTCTGGGGGCTGTATGATAATGCCACCTATCAACCTGAC
AAGCAGTAATTTGTTGGCCGCAAATCCCAGTTCAAACCTCTCCCACCCCAATTCACGGTTAACT
GAAAGAACAAAAAAGAGACGCACCTCTTCACAAACTATTGGACAAACTTTGTCTAATAGCAGAC
AAGAGGACACAGGTCCCACACAAGTCCAAACAGAGAAAGGTGCATTTAATGAGCGAACAGGTCA
GAATGACCAAATAGCAAGTGGAAACAAAAGAAAACTGAATTTTTCCAAATGCGACAGGAAAGAA
TTCCATTTCCCTGAGCTGCCGTTCACAATACAGGCGAAGGAGATGAAAGGGATGGAGGTTAAAC
AGATAAAAGTGCTGAAGAGAGAATCAAAGAAAACGGATTCACCTAAAATACCAACTTTACTTAG
TATGGACTCAAATCAAGAAAAACAAGAGGTACAGCTGTGCGGAGTCTGCCCCTCTGCGAGCTCC
CTCCAGCCAGCCAGCGAGGTGATCATTTGCTGCTTGTGCAGTCAGGGGAATGGTTGTGAGAGGC
AATCATTTTGTTTGTTCATTTTCCCCAAGCTACTTGACTGCAGTGGACCCTGCCCTTTGAAGAT
GTCTCTTGTCTCAGTTCCATGATTCTCCCTGGCTTGAAACTTGGCACCAACTTGATACTTTTCA
GTCTCCAAGTGTCTGATAGCCATTTCAGCAGCAGGCCTACTTAATTTATTCTTGCTGTAACATT
CTGGTTCCAGAAAATTATATTAGTTTTTCCTAGTCATCTCTTTTTTCCTCCAGATTCTCACTTT
TATTTTTTTTAACTGTTTCACGTCCTGTTTTGTGATACAAGTTACCTCTTAATTTGTTTGTTCT
CAACTAGCCTCAAATTGCCTTCTGTTAAATGTTGTTTATGTGTGATAAAGGTCTGCATTATTAT
GCTCAGTTGTGGTATCAGTCAGTGGTCCCCAGACAAGCAGAACAAACGGGATAGGATGTTCTAA
GAGTAGGCTCCTTAGCTTCGCTCTCATCGGCAGAAGCTGAGCTGCACAGAGGCCATCTGCACAC
TGGAAAACCAGGGAACATTGGTGGCTCTAGGAAGCTGGAAACCTCAGCACAAGAGACATATGTG
CCATAGTCTGAGGCCAAATGCCTGGACGTCCCAAGGAGCTGCTGGTGCACATCTGTACTTAGAG
GCTGAAGCACCAAACATTCATAGGAAACAGAAGTGGCAAAACCCACCTCCACTCAGGAAGGATC
AAGCATGCAATTGCCAGCTTCCCACTTCTCCTTTTTGCTTTGTCGGTCTCCTGCCTATTGGATA
TCACCTGAGTTAATGGTTGGTCTTCTCTAGAAAGAAGCTCACTCCATCAAGTCAGCTTGACAGC
CATACTAGTCATCAACATTCCCCAAAGAGAGGATATAGAAAATGAACACAAAAACAGTGACAAA
TAACTTCAATATGTCAGTAATTTTAAAAAATTCCCTAGAGTTGACAGGTTGTTTAAGCAGATAA
AGGCACTTACAACCTGAGTTTGATTCCTGGGAGCCCTCTGGTCAGCCATCTACTGACCTTCACA
TACATACGGGATATACGTATGTGCGCATGCACACACATGGGCACACACACACACACATCACACA
TACATGCACACACACAATCACAAAATAATAAGATAGATAAATGGGATAAGAATTTTATAATTAG
CTAAGGTATAAATATAAAATGTAAGGAAGTGAGAACTGCTGCCACAATTCATAAAATATTAGAA
CACAAAAT

hide sequence

RefSeq Acc Id:

XM_008773889 ⟹ XP_008772111

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,767,819 - 36,803,875 (+)	NCBI
mRatBN7.2	10	36,266,892 - 36,301,301 (+)	NCBI

Sequence:

show sequence

CCAGCGATTTCCAGTCTTGCGTACTGTGCTCCGAACGCCTCAGGTCCCGCCCCCACCCGGTTGC
CAGGGCATCCGGCTGCCCGGAGCGGGCAAGGTCGGCCAGGACTGGAGGTGTGGTGTCCCGCGTC
CGGCTGGGACTTCCACGCAGCCGGGCCGGCGGGACTACAGGATGGGCTGAGGCGGCGGCGATTC
TCAGGACGAGGTCCACAGCGCGGCGAGACGGGCCACTCGGGTTGGGGCTGCACAGACTGTGTTT
GAGAAGAGGGCAGGACGTATGGGTGACTGTAGTGCTGAGAAGCCAGGCTTGAAAATGGAGATGT
ATGAAACCCTTGGAAAAGTAGGAGAGGGAAGTTATGGAACGGTCATGAAATGCAAGCATAAGGA
TACTGGGCGGATAGTGGCCATTAAGATATTCTATGAGAAACCAGAAAAATCTGTCAACAAAATT
GCAACGAGAGAAATAAAGTTTCTAAAGCAATTTCGTCATGAAAACCTGGTCAATCTGATTGAAG
TTTTTAGACAAAAAAAGAAAATCCATTTGGTATTTGAGTTTATTGACCACACGGTCTTAGATGA
GTTACAGCATTATTGTCACGGATTAGAGAGTAAGCGACTAAGAAAGTACCTGTTCCAGATCCTC
CGAGCGATCGAGTATCTGCACAACAACAACATTATCCACCGAGATATAAAGCCTGAGAATATTT
TAGTCTCCCAGTCAGGAATTACAAAGCTCTGCGATTTTGGGTTTGCGCGGACACTAGCAGCTCC
TGGAGACGTTTACACAGACTACGTGGCCACCCGCTGGTACAGAGCTCCAGAGCTGGTGTTGAAA
GACACCACCTATGGAAAACCAGTGGATATCTGGGCTTTGGGCTGTATGATCATTGAAATGGCCA
CTGGCAATCCCTACCTTCCTAGCAGTTCCGATTTGGATTTGCTCCACAAGATTGTTTTAAAAGT
AGGCAACCTGACCCCGCACCTGCACAATATTTTTTCCAAGAGTCCCATCTTTGCTGGGGTGGTT
CTTCCTCAAGTTCAACATCCCAAAAACGCAAGAAAGAAATACCCAAAGCTCAACGGATTGCTGG
CAGATATAGTTCATGCTTGTTTACAAATTGATCCTGCTGAGAGGATATCATCCACCGATCTTTT
GCATCACGATTACTTTACTAGAGATGGATTTATTGAGAAATTTATACCAGAGCTGAGAGCTAAG
TTATTACAGGAAGCAAAGGTTAATTCATTTATAAAGCCAAAAGAGAATTTTAAGGAAAATGAAC
CTGTGAGAGATGAGAAAAAACCAGTTTTTACCAACCCTCTGCTCTATGGAAACCCAACACTTTA
TGGAAAGGAAGTGGACAGAGACAAAAGGGCCAAGGAGCTCAAAGTCAGAGTCATTAAGGCCAAA
GGGGGAAAAGGAGACGTCCCAGACCTGAAGAAGACAGAGAGTGAAGGTGAACACCGCCAGCAGG
GCACAGCTGAGGACACACACCCCACATCACTGGACAGGAAGCCTTCTGTCTCGGAACTAACAAA
CCCTGTCCATCCCAGTGCGAATTCTGACACTGTCAAAGAAGACCCACACTCTGGGGGCTGTATG
ATAATGCCACCTATCAACCTGACAAGCAGTAATTTGTTGGCCGCAAATCCCAGTTCAAACCTCT
CCCACCCCAATTCACGGTTAACTGAAAGAACAAAAAAGAGACGCACCTCTTCACAAACTATTGG
ACAAACTTTGTCTAATAGCAGACAAGAGGACACAGGTCCCACACAAGTCCAAACAGAGAAAGGT
GCATTTAATGAGCGAACAGGTCAGAATGACCAAATAGCAAGTGGAAACAAAAGAAAACTGAATT
TTTCCAAATGCGACAGGAAAGAATTCCATTTCCCTGAGCTGCCGTTCACAATACAGGCGAAGGA
GATGAAAGGGATGGAGGTTAAACAGATAAAAGTGCTGAAGAGAGAATCAAAGAAAACGGATTCA
CCTAAAATACCAACTTTACTTAGTATGGACTCAAATCAAGAAAAACAAGAGGGTGGAGATGGCG
ATTGTGAGGGGAAGAATTTGAAGAGGAACAGATTTTTTTTTTCCCGATAGTTCTTTGTATTTTA
AGTAATCTTAAAAATACAACCTTGACAAGTCCTTCCTTTTTATTTGATATACAATAGACTGTAA
CGTAGGTCGCTGCTAAGATAGCTGTCCATCCCATCTACATCAGCATCATCTGCTTTTTTGGTTT
TGCTAGCAAAATTTTAACCATTTTTCTCTTTCTTCTAAAAACTGTGTTATTTTGATGCTGTGAT
TTGAAATTATAAAATCACCTTCTCTACCTGCTTCCTTCCTTGCTACAATTACTGAGTGGGTAGT
CACATGATGTGCCCTGCTCACAGCGCTCTTAGCCTGCTGAGAGCCCTCATAAGCCAGGGTCTCC
TGGAAAGCACTGGCCTCTTCAAGTGGATGCTCGATGAACCTTCATATCTGTTGTCTTAGCAACC
ACTCGTTGCCATCACATGATGAAAGACATTCTGTTGTCAGCAGTGAAGCATTTATAGTACTTTG
ATAACACCAGTGATATGATGACAGTGATATGATGTTCCTAGGTTAAATTCCTTGAGTTGCCTGC
ATTCTCTGACTCCCCTAGGCTAATCGTTCTTTCCATTTAGCCAGAAGAATTTCCTGAAGAAACA
ATGCACACCTGGAAAAGGTTTTCTTTCTATCCTGGGCTGTTTTCTGTTGCTGAATAATACAGAC
TGGGTAGTTAGTTAACATAAAAAAACAAAGATTTTTTAGCTCATAGTTCTGGAAGCTAAAAGTC
CACTGATACTGGCCAAAATCTGTTCAGTGTCTGGGAGGGCCTTGCTACAGTTGAGCAAGAGGTG
GAGGGCACTCCGTGGAGTGGCAGTACATCATGGAGGTGCCATTTCATGACTTTGTCCATTCTGA
ATTACCTCCTGAAGGCCCCAGCTGCCTAATGTCATTGACATATTAGTTTGATTAAGCTTTTTTT
TTTTTAAGATTTATTTATTTTATATATGTTAGTACATTGTTGCTGACTTCAGACATACCAGAAG
AGGGCATTGGAGATCCCATTACCAATGGTTGTAATCCACCATGTGGTTGTGGTTGCTGGGAATT
GAACTCAGGACTTCTGGAAGAGCAGTCAGTGCCCTTAACTACTG

hide sequence

RefSeq Acc Id:

XM_017602529 ⟹ XP_017458018

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,850,197 (+)	NCBI
mRatBN7.2	10	36,266,891 - 36,349,268 (+)	NCBI

Sequence:

show sequence

CCCCAGCGATTTCCAGTCTTGCGTACTGTGCTCCGAACGCCTCAGGTCCCGCCCCCACCCGGTT
GCCAGGGCATCCGGCTGCCCGGAGCGGGCAAGGTCGGCCAGGACTGGAGGTGTGGTGTCCCGCG
TCCGGCTGGGACTTCCACGCAGCCGGGCCGGCGGGACTACAGGATGGGCTGAGGCGGCGGCGAT
TCTCAGGACGAGGTCCACAGCGCGGCGAGACGGGCCACTCGGGTTGGGGCTGCACAGACTGTGT
TTGAGAAGAGGGCAGGACGTATGGGTGACTGTAGTGCTGAGAAGCCAGGCTTGAAAATGGAGAT
GTATGAAACCCTTGGAAAAGTAGGAGAGGGAAGTTATGGAACGGTCATGAAATGCAAGCATAAG
GATACTGGGCGGATAGTGGCCATTAAGATATTCTATGAGAAACCAGAAAAATCTGTCAACAAAA
TTGCAACGAGAGAAATAAAGTTTCTAAAGCAATTTCGTCATGAAAACCTGGTCAATCTGATTGA
AGTTTTTAGACAAAAAAAGAAAATCCATTTGGTATTTGAGTTTATTGACCACACGGTCTTAGAT
GAGTTACAGCATTATTGTCACGGATTAGAGAGTAAGCGACTAAGAAAGTACCTGTTCCAGATCC
TCCGAGCGATCGAGTATCTGCACAACAACAACATTATCCACCGAGATATAAAGCCTGAGAATAT
TTTAGTCTCCCAGTCAGGAATTACAAAGCTCTGCGATTTTGGGTTTGCGCGGACACTAGCAGCT
CCTGGAGACGTTTACACAGACTACGTGGCCACCCGCTGGTACAGAGCTCCAGAGCTGGTGTTGA
AAGACACCACCTATGGAAAACCAGTGGATATCTGGGCTTTGGGCTGTATGATCATTGAAATGGC
CACTGGCAATCCCTACCTTCCTAGCAGTTCCGATTTGGATTTGCTCCACAAGATTGTTTTAAAA
GTAGGCAACCTGACCCCGCACCTGCACAATATTTTTTCCAAGAGTCCCATCTTTGCTGGGGTGG
TTCTTCCTCAAGTTCAACATCCCAAAAACGCAAGAAAGAAATACCCAAAGCTCAACGGATTGCT
GGCAGATATAGTTCATGCTTGTTTACAAATTGATCCTGCTGAGAGGATATCATCCACCGATCTT
TTGCATCACGATTACTTTACTAGAGATGGATTTATTGAGAAATTTATACCAGAGCTGAGAGCTA
AGTTATTACAGGAAGCAAAGGTTAATTCATTTATAAAGCCAAAAGAGAATTTTAAGGAAAATGA
ACCTGTGAGAGATGAGAAAAAACCAGTTTTTACCAACCCTCTGCTCTATGGAAACCCAACACTT
TATGGAAAGGAAGTGGACAGAGACAAAAGGGCCAAGGAGCTCAAAGTCAGAGTCATTAAGGCCA
AAGGGGGAAAAGGAGACGTCCCAGACCTGAAGAAGACAGAGAGTGAAGGTGAACACCGCCAGCA
GGGCACAGCTGAGGACACACACCCCACATCACTGGACAGGAAGCCTTCTGTCTCGGAACTAACA
AACCCTGTCCATCCCAGTGCGAATTCTGACACTGTCAAAGAAGACCCACACTCTGGGGGCTGTA
TGATAATGCCACCTATCAACCTGACAAGCAGTAATTTGTTGGCCGCAAATCCCAGTTCAAACCT
CTCCCACCCCAATTCACGGTTAACTGAAAGAACAAAAAAGAGACGCACCTCTTCACAAACTATT
GGACAAACTTTGTCTAATAGCAGACAAGAGGACACAGGTCCCACACAAGTCCAAACAGAGAAAG
GTGCATTTAATGAGCGAACAGGTCAGAATGACCAAATAGCAAGTGGAAACAAAAGAAAACTGAA
TTTTTCCAAATGCGACAGGAAAGAATTCCATTTCCCTGAGCTGCCGTTCACAATACAGGCGAAG
GAGATGAAAGGGATGGAGGTTAAACAGATAAAAGTGCTGAAGAGAGAATCAAAGAAAACGGATT
CACCTAAAATACCAACTTTACTTAGTATGGACTCAAATCAAGAAAAACAAGAGACAGAACCGTG
CATGACTGTGAATGAGCAGCTTGGTCAAGAAAGGAAAGAGCCCACAGGGAGGGGAGGCCAAGGG
TTTTCAACATCTTTCCTGGCTGGTGCAAGAGAGGCAACCTCAACTGGCCATCCTGACCTCCCTC
TGGGTCAACCCCCACACTCTGCAGAGAGCTTGCTTCTCTAAAGCTAAAGAAGTCCGGGTTATTC
TTCAATGTGGAGCTCAAGCATCAGCTTCTATAGAAAGGCTTTCCCAATGTCACCAAGCAACATC
TTCACTCTTGAGAGCATGAGTAATAAATCTGTTTCACCTGG

hide sequence

RefSeq Acc Id:

XM_017602531 ⟹ XP_017458020

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,783,505 - 36,833,314 (+)	NCBI
mRatBN7.2	10	36,282,568 - 36,312,568 (+)	NCBI

Sequence:

show sequence

ATACTCTGAGAACCTCCAGGCTTATCCTGGTGTGTCCTTCTCTCTGCAATGTTGACACTCTGCC
CTCTGGTCTGGGTCCCGTCAGTGAAAAGGGACACCTTTAAAGACCAGTGGATATCTGGGCTTTG
GGCTGTATGATCATTGAAATGGCCACTGGCAATCCCTACCTTCCTAGCAGTTCCGATTTGGATT
TGCTCCACAAGATTGTTTTAAAAGTAGGCAACCTGACCCCGCACCTGCACAATATTTTTTCCAA
GAGTCCCATCTTTGCTGGGGTGGTTCTTCCTCAAGTTCAACATCCCAAAAACGCAAGAAAGAAA
TACCCAAAGCTCAACGGATTGCTGGCAGATATAGTTCATGCTTGTTTACAAATTGATCCTGCTG
AGAGGATATCATCCACCGATCTTTTGCATCACGATTACTTTACTAGAGATGGATTTATTGAGAA
ATTTATACCAGAGCTGAGAGCTAAGTTATTACAGGAAGCAAAGGTTAATTCATTTATAAAGCCA
AAAGAGAATTTTAAGGAAAATGAACCTGTGAGAGATGAGAAAAAACCAGTTTTTACCAACCCTC
TGCTCTATGGAAACCCAACACTTTATGGAAAGGAAGTGGACAGAGACAAAAGGGCCAAGGAGCT
CAAAGTCAGAGTCATTAAGGCCAAAGGGGGAAAAGGAGACGTCCCAGACCTGAAGAAGACAGAG
AGTGAAGGTGAACACCGCCAGCAGGGCACAGCTGAGGACACACACCCCACATCACTGGACAGGA
AGCCTTCTGTCTCGGAACTAACAAACCCTGTCCATCCCAGTGCGAATTCTGACACTGTCAAAGA
AGACCCACACTCTGGGGGCTGTATGATAATGCCACCTATCAACCTGACAAGCAGTAATTTGTTG
GCCGCAAATCCCAGTTCAAACCTCTCCCACCCCAATTCACGGTTAACTGAAAGAACAAAAAAGA
GACGCACCTCTTCACAAACTATTGGACAAACTTTGTCTAATAGCAGACAAGAGGACACAGGTCC
CACACAAGTCCAAACAGAGAAAGGTGCATTTAATGAGCGAACAGGTCAGAATGACCAAATAGCA
AGTGGAAACAAAAGAAAACTGAATTTTTCCAAATGCGACAGGAAAGAATTCCATTTCCCTGAGC
TGCCGTTCACAATACAGGCGAAGGAGATGAAAGGGATGGAGGTTAAACAGATAAAAGTGCTGAA
GAGAGAATCAAAGAAAACGGATTCACCTAAAATACCAACTTTACTTAGTATGGACTCAAATCAA
GAAAAACAAGAGGTACAGCTGTGCGGAGTCTGCCCCTCTGCGAGCTCCCTCCAGCCAGCCAGCG
AGGTGATCATTTGCTGCTTGTGCAGTCAGGGGAATGGTTGTGAGAGGCAATCATTTTGTTTGTT
CATTTTCCCCAAGCTACTTGACTGCAGTGGACCCTGCCCTTTGAAGATGTCTCTTGTCTCAGTT
CCATGATTCTCCCTGGCTTGAAACTTGGCACCAACTTGATACTTTTCAGTCTCCAAGTGTCTGA
TAGCCATTTCAGCAGCAGGCCTACTTAATTTATTCTTGCTGTAACATTCTGGTTCCAGAAAATT
ATATTAGTTTTTCCTAGTCATCTCTTTTTTCCTCCAGATTCTCACTTTTATTTTTTTTAACTGT
TTCACGTCCTGTTTTGTGATACAAGTTACCTCTTAATTTGTTTGTTCTCAACTAGCCTCAAATT
GCCTTCTGTTAAATGTTGTTTATGTGTGATAAAGGTCTGCATTATTATGCTCAGTTGTGGTATC
AGTCAGTGGTCCCCAGACAAGCAGAACAAACGGGATAGGATGTTCTAAGAGTAGGCTCCTTAGC
TTCGCTCTCATCGGCAGAAGCTGAGCTGCACAGAGGCCATCTGCACACTGGAAAACCAGGGAAC
ATTGGTGGCTCTAGGAAGCTGGAAACCTCAGCACAAGAGACATATGTGCCATAGTCTGAGGCCA
AATGCCTGGACGTCCCAAGGAGCTGCTGGTGCACATCTGTACTTAGAGGCTGAAGCACCAAACA
TTCATAGGAAACAGAAGTGGCAAAACCCACCTCCACTCAGGAAGGATCAAGCATGCAATTGCCA
GCTTCCCACTTCTCCTTTTTGCTTTGTCGGTCTCCTGCCTATTGGATATCACCTGAGTTAATGG
TTGGTCTTCTCTAGAAAGAAGCTCACTCCATCAAGTCAGCTTGACAGCCATACTAGTCATCAAC
ATTCCCCAAAGAGAGGATATAGAAAATGAACACAAAAACAGTGACAAATAACTTCAATATGTCA
GTAATTTTAAAAAATTCCCTAGAGTTGACAGGTTGTTTAAGCAGATAAAGGCACTTACAACCTG
AGTTTGATTCCTGGGAGCCCTCTGGTCAGCCATCTACTGACCTTCACATACATACGGGATATAC
GTATGTGCGCATGCACACACATGGGCACACACACACACACATCACACATACATGCACACACACA
ATCACAAAATAATAAGATAGATAAATGGGATAAGAATTTTATAATTAGCTAAGGTATAAATATA
AAATGTAAGGAAGTGAGAACTGCTGCCACAATTCATAAAATATTAGAACACAAAATAAA

hide sequence

RefSeq Acc Id:

XM_039086735 ⟹ XP_038942663

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,764,426 - 36,833,314 (+)	NCBI
mRatBN7.2	10	36,263,525 - 36,311,829 (+)	NCBI

RefSeq Acc Id:

XM_039086737 ⟹ XP_038942665

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,764,679 - 36,833,314 (+)	NCBI
mRatBN7.2	10	36,263,742 - 36,311,829 (+)	NCBI

RefSeq Acc Id:

XM_039086738 ⟹ XP_038942666

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,755,413 - 36,833,314 (+)	NCBI
mRatBN7.2	10	36,263,212 - 36,311,829 (+)	NCBI

RefSeq Acc Id:

XM_039086739 ⟹ XP_038942667

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,795,881 (+)	NCBI
mRatBN7.2	10	36,266,884 - 36,295,034 (+)	NCBI

RefSeq Acc Id:

XM_063269754 ⟹ XP_063125824

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,764,679 - 36,833,314 (+)	NCBI

RefSeq Acc Id:

XM_063269756 ⟹ XP_063125826

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,803,875 (+)	NCBI

RefSeq Acc Id:

XM_063269757 ⟹ XP_063125827

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,767,819 - 36,848,400 (+)	NCBI

RefSeq Acc Id:

XM_063269758 ⟹ XP_063125828

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,767,819 - 36,803,875 (+)	NCBI

RefSeq Acc Id:

XM_063269759 ⟹ XP_063125829

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,764,292 - 36,803,875 (+)	NCBI

RefSeq Acc Id:

XM_063269760 ⟹ XP_063125830

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,755,413 - 36,803,875 (+)	NCBI

RefSeq Acc Id:

XM_063269762 ⟹ XP_063125832

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,764,292 - 36,848,400 (+)	NCBI

RefSeq Acc Id:

XM_063269763 ⟹ XP_063125833

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,767,819 - 36,799,663 (+)	NCBI

RefSeq Acc Id:

XR_005489935

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,797,376 (+)	NCBI
mRatBN7.2	10	36,266,890 - 36,296,453 (+)	NCBI

RefSeq Acc Id:

XR_005489936

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,795,881 (+)	NCBI
mRatBN7.2	10	36,266,885 - 36,294,922 (+)	NCBI

RefSeq Acc Id:

XR_010055232

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,767,820 - 36,850,197 (+)	NCBI

RefSeq Acc Id:

XR_010055233

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,755,413 - 36,850,197 (+)	NCBI

RefSeq Acc Id:

XR_010055234

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,764,683 - 36,850,197 (+)	NCBI

RefSeq Acc Id:

XR_010055235

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,764,426 - 36,850,197 (+)	NCBI

RefSeq Acc Id:

XR_010055236

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,797,376 (+)	NCBI

RefSeq Acc Id:

XR_597993

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	36,766,507 - 36,850,197 (+)	NCBI
mRatBN7.2	10	36,266,893 - 36,349,268 (+)	NCBI

Sequence:

show sequence

CAGCGATTTCCAGTCTTGCGTACTGTGCTCCGAACGCCTCAGGTCCCGCCCCCACCCGGTTGCC
AGGGCATCCGGCTGCCCGGAGCGGGCAAGGTCGGCCAGGACTGGAGGTGTGGTGTCCCGCGTCC
GGCTGGGACTTCCACGCAGCCGGGCCGGCGGGACTACAGGATGGGCTGAGGCGGCGGCGATTCT
CAGGACGAGGTCCACAGCGCGGCGAGACGGGCCACTCGGGTTGGGGCTGCACAGACTGTGTTTG
AGAAGAGGGCAGGACGTATGGGTGACTGTAGTGCTGAGAAGCCAGGCTTGAAAATGGAGATGTA
TGAAACCCTTGGAAAAGTAGGAGAGGGAAGTTATGGAACGGTCATGAAATGCAAGCATAAGGAT
ACTGGGCGGATAGTGGCCATTAAGATATTCTATGAGAAACCAGAAAAATCTGTCAACAAAATTG
CAACGAGAGAAATAAAGTTTCTAAAGCAATTTCGTCATGAAAACCTGGTCAATCTGATTGAAGT
TTTTAGACAAAAAAAGAAAATCCATTTGGTATTTGAGTTTATTGACCACACGGTCTTAGATGAG
TTACAGCATTATTGTCACGGATTAGAGAGTAAGCGACTAAGAAAGTACCTGTTCCAGATCCTCC
GAGCGATCGAGTATCTGCACAACAACAACATTATCCACCGAGATATAAAGCCTGAGAATATTTT
AGTCTCCCAGTCAGGAATTACAAAGCTCTGCGATTTTGGGTTTGCGCGGACACTAGCAGCTCCT
GGAGACGTTTACACAGACTACGTGGCCACCCGCTGGTACAGAGCTCCAGAGCTGGTGTTGAAAG
ACACCACCTATGGAAAACCAGTGGATATCTGGGCTTTGGGCTGTATGATCATTGAAATGGCCAC
TGGCAATCCCTACCTTCCTAGCAGTTCCGATTTGGATTTGCTCCACAAGATTGTTTTAAAAGTA
GGCAACCTGACCCCGCACCTGCACAATATTTTTTCCAAGAGTCCCATCTTTGCTGGGGTGGTTC
TTCCTCAAGTTCAACATCCCAAAAACGCAAGAAAGAAATACCCAAAGCTCAACGGATTGCTGGC
AGATATAGTTCATGCTTGTTTACAAATTGATCCTGCTGAGAGGATATCATCCACCGATCTTTTG
CATCACGATTACTTTACTAGAGATGGATTTATTGAGAAATTTATACCAGAGCTGAGAGCTAAGT
TATTACAGGAAGCAAAGGTTAATTCATTTATAAAGCCAAAAGAGAATTTTAAGGAAAATGAACC
TGTGAGAGATGAGAAAAAACCAGTTTTTACCAACCCTCTGCTCTATGGAAACCCAACACTTTAT
GGAAAGGAAGTGGACAGAGACAAAAGGGCCAAGGAGCTCAAAGTCAGAGTCATTAAGGCCAAAG
GGGGAAAAGGAGACGTCCCAGACCTGAAGAAGACAGAGAGTGAAGGTGAACACCGCCAGCAGGG
CACAGCTGAGGACACACACCCCACATCACTGGACAGGAAGCCTTCTGTCTCGGAACTAACAAAC
CCTGTCCATCCCAGTGCGAATTCTGACACTGTCAAAGAAGACCCACACTCTGGGGGCTGTATGA
TAATGCCACCTATCAACCTGACAAGCAGTAATTTGTTGGCCGCAAATCCCAGTTCAAACCTCTC
CCACCCCAATTCACGGTTAACTGAAAGAACAAAAAAGAGACGCACCTCTTCACAAACTATTGGA
CAAACTTTGTCTAATAGCAGACAAGAGGACACAGGTCCCACACAAGTCCAAACAGAGAAAGGTG
CATTTAATGAGCGAACAGGTCAGAATGACCAAATAGCAAGTGGAAACAAAAGAAAACTGAATTT
TTCCAAATGCGACAGGAAAGAATTCCATTTCCCTGAGCTGCCGTTCACAATACAGGCGAAGGAG
ATGAAAGGGATGGAGGTTAAACAGATAAAAGTGCTGAAGAGAGAATCAAAGAAAACGGATTCAC
CTAAAATACCAACTTTACTTAGTATGGACTCAAATCAAGAAAAACAAGAGGTTTTCAACATCTT
TCCTGGCTGGTGCAAGAGAGGCAACCTCAACTGGCCATCCTGACCTCCCTCTGGGTCAACCCCC
ACACTCTGCAGAGAGCTTGCTTCTCTAAAGCTAAAGAAGTCCGGGTTATTCTTCAATGTGGAGC
TCAAGCATCAGCTTCTATAGAAAGGCTTTCCCAATGTCACCAAGCAACATCTTCACTCTTGAGA
GCATGAGTAATAAATCTGTTTCACCTGG

hide sequence

Protein Sequences


Protein RefSeqs	NP_068540	(Get FASTA)	NCBI Sequence Viewer
	XP_008772105	(Get FASTA)	NCBI Sequence Viewer
	XP_008772106	(Get FASTA)	NCBI Sequence Viewer
	XP_008772107	(Get FASTA)	NCBI Sequence Viewer
	XP_008772108	(Get FASTA)	NCBI Sequence Viewer
	XP_008772111	(Get FASTA)	NCBI Sequence Viewer
	XP_017458018	(Get FASTA)	NCBI Sequence Viewer
	XP_017458020	(Get FASTA)	NCBI Sequence Viewer
	XP_038942663	(Get FASTA)	NCBI Sequence Viewer
	XP_038942665	(Get FASTA)	NCBI Sequence Viewer
	XP_038942666	(Get FASTA)	NCBI Sequence Viewer
	XP_038942667	(Get FASTA)	NCBI Sequence Viewer
	XP_063125824	(Get FASTA)	NCBI Sequence Viewer
	XP_063125826	(Get FASTA)	NCBI Sequence Viewer
	XP_063125827	(Get FASTA)	NCBI Sequence Viewer
	XP_063125828	(Get FASTA)	NCBI Sequence Viewer
	XP_063125829	(Get FASTA)	NCBI Sequence Viewer
	XP_063125830	(Get FASTA)	NCBI Sequence Viewer
	XP_063125832	(Get FASTA)	NCBI Sequence Viewer
	XP_063125833	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF34870	(Get FASTA)	NCBI Sequence Viewer
	AAF34871	(Get FASTA)	NCBI Sequence Viewer
	EDM04342	(Get FASTA)	NCBI Sequence Viewer
	EDM04343	(Get FASTA)	NCBI Sequence Viewer
	EDM04344	(Get FASTA)	NCBI Sequence Viewer
	EDM04345	(Get FASTA)	NCBI Sequence Viewer
	EDM04346	(Get FASTA)	NCBI Sequence Viewer
	EDM04347	(Get FASTA)	NCBI Sequence Viewer
	EDM04348	(Get FASTA)	NCBI Sequence Viewer
	EDM04349	(Get FASTA)	NCBI Sequence Viewer
	EDM04350	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000072310
	ENSRNOP00000073449
	ENSRNOP00000073449.2
	ENSRNOP00000082633
	ENSRNOP00000084767
	ENSRNOP00000091215
	ENSRNOP00000094552
GenBank Protein	Q9JM01	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_068540 ⟸ NM_021772

- UniProtKB:

A6HE95 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEMYETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIKFLKQFRHENLVN
LIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYLHNNNIIHRDIKP
ENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGKPVDIWALGCMII
EMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKNARKKYPKLN
GLLADIVHACLQIDPAERISSTDLLHHDYFTRDGFIEKFIPELRAKLLQEAKVNSFIKPKENFK
ENEPVRDEKKPVFTNPLLYGNPTLYGKEVDRDKRAKELKVRVIKAKGGKGDVPDLKKTESEGEH
RQQGTAEDTHPTSLDRKPSVSELTNPVHPSANSDTVKEDPHSGGCMIMPPINLTSSNLLAANPS
SNLSHPNSR

hide sequence

Ensembl Acc Id:

ENSRNOP00000072310 ⟸ ENSRNOT00000079411

RefSeq Acc Id:	XP_038942666 ⟸ XM_039086738
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZUY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942663 ⟸ XM_039086735
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZUY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942665 ⟸ XM_039086737
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZUY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942667 ⟸ XM_039086739
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_008772107 ⟸ XM_008773885
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZUY6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEMYETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIKFLKQFRHENLVN LIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYLHNNNIIHRDIKP ENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGKPVDIWALGCMII EMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKNARKKYPKLN GLLADIVHACLQIDPAERISSTDLLHHDYFTRDGFIEKFIPELRAKLLQEAKVNSFIKPKENFK ENEPVRDEKKPVFTNPLLYGNPTLYGKEVDRDKRAKELKVRVIKAKGGKGDVPDLKKTESEGEH RQQGTAEDTHPTSLDRKPSVSELTNPVHPSANSDTVKEDPHSGGCMIMPPINLTSSNLLAANPS SNLSHPNSRLTERTKKRRTSSQTIGQTLSNSRQEDTGPTQVQTEKGAFNERTGQNDQIASGNKR KLNFSKCDRKEFHFPELPFTIQAKEMKGMEVKQIKVLKRESKKTDSPKIPTLLSMDSNQEKQEV QLCGVCPSASSLQPASEVIICCLCSQGNGCERQSFCLFIFPKLLDCSGPCPLKMSLVSVP hide sequence

RefSeq Acc Id:	XP_008772105 ⟸ XM_008773883
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZUY6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGDCSAEKPGLKMEMYETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIK FLKQFRHENLVNLIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYL HNNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGK PVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQH PKNARKKYPKLNGLLADIVHACLQIDPAERISSTDLLHHDYFTRDGFIEKFIPELRAKLLQEAK VNSFIKPKENFKENEPVRDEKKPVFTNPLLYGNPTLYGKEVDRDKRAKELKVRVIKAKGGKGDV PDLKKTESEGEHRQQGTAEDTHPTSLDRKPSVSELTNPVHPSANSDTVKEDPHSGGCMIMPPIN LTSSNLLAANPSSNLSHPNSRLTERTKKRRTSSQTIGQTLSNSRQEDTGPTQVQTEKGAFNERT GQNDQIASGNKRKLNFSKCDRKEFHFPELPFTIQAKEMKGMEVKQIKVLKRESKKTDSPKIPTL LSMDSNQEKQEVQLCGVCPSASSLQPASEVIICCLCSQGNGCERQSFCLFIFPKLLDCSGPCPL KMSLVSVP hide sequence

RefSeq Acc Id:	XP_008772108 ⟸ XM_008773886
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZUY6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEMYETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIKFLKQFRHENLVN LIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYLHNNNIIHRDIKP ENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGKPVDIWALGCMII EMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKNARKKYPKLN GLLADIVHACLQIDPAERISSTDLLHHDYFTRDGFIEKFIPELRAKLLQEAKVNSFIKPKENFK ENEPVRDEKKPVFTNPLLYGNPTLYGKEVDRDKRAKELKVRVIKAKGGKGDVPDLKKTESEGEH RQQGTAEDTHPTSLDRKPSVSELTNPVHPSANSDTVKEDPHSGGCMIMPPINLTSSNLLAANPS SNLSHPNSRLTERTKKRRTSSQTIGQTLSNSRQEDTGPTQVQTEKGAFNERTGQNDQIASGNKR KLNFSKCDRKEFHFPELPFTIQAKEMKGMEVKQIKVLKRESKKTDSPKIPTLLSMDSNQEKQEV QLCGVCPSASSLQPASEVIICCLCSQGNGCERQSFCLFIFPKLLDCSGPCPLKMSLVSVP hide sequence

RefSeq Acc Id:	XP_017458018 ⟸ XM_017602529
- Peptide Label:	isoform X2
- UniProtKB:	A6HE87 (UniProtKB/TrEMBL), A0A0G2K5J4 (UniProtKB/TrEMBL), A6HE88 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGDCSAEKPGLKMEMYETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIK FLKQFRHENLVNLIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYL HNNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGK PVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQH PKNARKKYPKLNGLLADIVHACLQIDPAERISSTDLLHHDYFTRDGFIEKFIPELRAKLLQEAK VNSFIKPKENFKENEPVRDEKKPVFTNPLLYGNPTLYGKEVDRDKRAKELKVRVIKAKGGKGDV PDLKKTESEGEHRQQGTAEDTHPTSLDRKPSVSELTNPVHPSANSDTVKEDPHSGGCMIMPPIN LTSSNLLAANPSSNLSHPNSRLTERTKKRRTSSQTIGQTLSNSRQEDTGPTQVQTEKGAFNERT GQNDQIASGNKRKLNFSKCDRKEFHFPELPFTIQAKEMKGMEVKQIKVLKRESKKTDSPKIPTL LSMDSNQEKQETEPCMTVNEQLGQERKEPTGRGGQGFSTSFLAGAREATSTGHPDLPLGQPPHS AESLLL hide sequence

RefSeq Acc Id:	XP_008772106 ⟸ XM_008773884
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZUY6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEMYETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIKFLKQFRHENLVN LIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYLHNNNIIHRDIKP ENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGKPVDIWALGCMII EMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKNARKKYPKLN GLLADIVHACLQIDPAERISSTDLLHHDYFTRDGFIEKFIPELRAKLLQEAKVNSFIKPKENFK ENEPVRDEKKPVFTNPLLYGNPTLYGKEVDRDKRAKELKVRVIKAKGGKGDVPDLKKTESEGEH RQQGTAEDTHPTSLDRKPSVSELTNPVHPSANSDTVKEDPHSGGCMIMPPINLTSSNLLAANPS SNLSHPNSRLTERTKKRRTSSQTIGQTLSNSRQEDTGPTQVQTEKGAFNERTGQNDQIASGNKR KLNFSKCDRKEFHFPELPFTIQAKEMKGMEVKQIKVLKRESKKTDSPKIPTLLSMDSNQEKQEV QLCGVCPSASSLQPASEVIICCLCSQGNGCERQSFCLFIFPKLLDCSGPCPLKMSLVSVP hide sequence

RefSeq Acc Id:	XP_008772111 ⟸ XM_008773889
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6GKT9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGDCSAEKPGLKMEMYETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIK FLKQFRHENLVNLIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYL HNNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGK PVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQH PKNARKKYPKLNGLLADIVHACLQIDPAERISSTDLLHHDYFTRDGFIEKFIPELRAKLLQEAK VNSFIKPKENFKENEPVRDEKKPVFTNPLLYGNPTLYGKEVDRDKRAKELKVRVIKAKGGKGDV PDLKKTESEGEHRQQGTAEDTHPTSLDRKPSVSELTNPVHPSANSDTVKEDPHSGGCMIMPPIN LTSSNLLAANPSSNLSHPNSRLTERTKKRRTSSQTIGQTLSNSRQEDTGPTQVQTEKGAFNERT GQNDQIASGNKRKLNFSKCDRKEFHFPELPFTIQAKEMKGMEVKQIKVLKRESKKTDSPKIPTL LSMDSNQEKQEGGDGDCEGKNLKRNRFFFSR hide sequence

RefSeq Acc Id:

XP_017458020 ⟸ XM_017602531

- Peptide Label:

isoform X10

- Sequence:

show sequence

MIIEMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKNARKKYP
KLNGLLADIVHACLQIDPAERISSTDLLHHDYFTRDGFIEKFIPELRAKLLQEAKVNSFIKPKE
NFKENEPVRDEKKPVFTNPLLYGNPTLYGKEVDRDKRAKELKVRVIKAKGGKGDVPDLKKTESE
GEHRQQGTAEDTHPTSLDRKPSVSELTNPVHPSANSDTVKEDPHSGGCMIMPPINLTSSNLLAA
NPSSNLSHPNSRLTERTKKRRTSSQTIGQTLSNSRQEDTGPTQVQTEKGAFNERTGQNDQIASG
NKRKLNFSKCDRKEFHFPELPFTIQAKEMKGMEVKQIKVLKRESKKTDSPKIPTLLSMDSNQEK
QEVQLCGVCPSASSLQPASEVIICCLCSQGNGCERQSFCLFIFPKLLDCSGPCPLKMSLVSVP

hide sequence

Ensembl Acc Id:

ENSRNOP00000073449 ⟸ ENSRNOT00000085895

Ensembl Acc Id:

ENSRNOP00000084767 ⟸ ENSRNOT00000099737

Ensembl Acc Id:

ENSRNOP00000091215 ⟸ ENSRNOT00000098640

Ensembl Acc Id:

ENSRNOP00000096533 ⟸ ENSRNOT00000113693

Ensembl Acc Id:

ENSRNOP00000094552 ⟸ ENSRNOT00000120278

Ensembl Acc Id:

ENSRNOP00000068841 ⟸ ENSRNOT00000087152

Ensembl Acc Id:

ENSRNOP00000082633 ⟸ ENSRNOT00000102740

RefSeq Acc Id:	XP_063125830 ⟸ XM_063269760
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZYS3 (UniProtKB/TrEMBL), A0A8I6GKT9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125832 ⟸ XM_063269762
- Peptide Label:	isoform X8
- UniProtKB:	Q9JM02 (UniProtKB/Swiss-Prot), Q9JM01 (UniProtKB/Swiss-Prot), A6HE90 (UniProtKB/TrEMBL), A0A8L2R015 (UniProtKB/TrEMBL), A6HE93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125829 ⟸ XM_063269759
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZYS3 (UniProtKB/TrEMBL), A0A8I6GKT9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125824 ⟸ XM_063269754
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZUY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125826 ⟸ XM_063269756
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K2N2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125827 ⟸ XM_063269757
- Peptide Label:	isoform X6
- UniProtKB:	A0A8L2R015 (UniProtKB/TrEMBL), A6HE93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125828 ⟸ XM_063269758
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZYS3 (UniProtKB/TrEMBL), A0A8I6GKT9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125833 ⟸ XM_063269763
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I6GKT9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000071286 ⟸ ENSRNOT00000079985

Protein Domains

Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9JM01-F1-model_v2	AlphaFold	Q9JM01	1-593	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13697167

Promoter ID:

EPDNEW_R7692

Type:

multiple initiation site

Name:

Cdkl3_1

Description:

cyclin-dependent kinase-like 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	37,458,470 - 37,458,530	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:619874	AgrOrtholog
BioCyc Gene	G2FUF-25178	BioCyc
Ensembl Genes	ENSRNOG00000059485	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000079411	ENTREZGENE
	ENSRNOT00000085895	ENTREZGENE
	ENSRNOT00000085895.2	UniProtKB/Swiss-Prot
	ENSRNOT00000098640	ENTREZGENE
	ENSRNOT00000099737	ENTREZGENE
	ENSRNOT00000102740	ENTREZGENE
	ENSRNOT00000120278	ENTREZGENE
Gene3D-CATH	Phosphorylase Kinase, domain 1	UniProtKB/Swiss-Prot
	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot
InterPro	CDK	UniProtKB/Swiss-Prot
	Kinase-like_dom_sf	UniProtKB/Swiss-Prot
	Prot_kinase_dom	UniProtKB/Swiss-Prot
	Protein_kinase_ATP_BS	UniProtKB/Swiss-Prot
	Ser/Thr_kinase_AS	UniProtKB/Swiss-Prot
KEGG Report	rno:60396	UniProtKB/Swiss-Prot
NCBI Gene	60396	ENTREZGENE
PANTHER	CELL DIVISION PROTEIN KINASE	UniProtKB/Swiss-Prot
	CYCLIN-DEPENDENT KINASE-LIKE 3	UniProtKB/Swiss-Prot
Pfam	Pkinase	UniProtKB/Swiss-Prot
PhenoGen	Cdkl3	PhenoGen
PROSITE	PROTEIN_KINASE_ATP	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_ST	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000059485	RatGTEx
SMART	S_TKc	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF56112	UniProtKB/Swiss-Prot
UniProt	A0A0G2K2N2	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K5J4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZUY6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZYS3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AQU1_RAT	UniProtKB/TrEMBL
	A0A8I6GKT9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2R015	ENTREZGENE, UniProtKB/TrEMBL
	A6HE87	ENTREZGENE, UniProtKB/TrEMBL
	A6HE88	ENTREZGENE, UniProtKB/TrEMBL
	A6HE90	ENTREZGENE, UniProtKB/TrEMBL
	A6HE93	ENTREZGENE, UniProtKB/TrEMBL
	A6HE95	ENTREZGENE, UniProtKB/TrEMBL
	CDKL3_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	Q9JM02	ENTREZGENE
UniProt Secondary	Q9JM02	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Cdkl3	cyclin-dependent kinase-like 3	LOC103693326	uncharacterized LOC103693326	Data merged from RGD:9397746	737654	PROVISIONAL
2015-02-13	Cdkl3	cyclin-dependent kinase-like 3	LOC103694901	cyclin-dependent kinase-like 3	Data merged from RGD:9243578	737654	APPROVED
2014-08-25	LOC103693326	uncharacterized LOC103693326			Symbol and Name status set to provisional	70820	PROVISIONAL
2014-08-25	LOC103694901	cyclin-dependent kinase-like 3			Symbol and Name status set to provisional	70820	PROVISIONAL
2004-09-10	Cdkl3	cyclin-dependent kinase-like 3	Nkiatreb	serine/threonine kinase NKIATRE beta	Symbol and Name updated	1299863	APPROVED
2002-08-07	Nkiatreb	serine/threonine kinase NKIATRE beta			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_domains	contains a cyclin-binding domain	633468
gene_protein	contains two isoforms, of which one has a nuclear localization signal	633468

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message