Uggt1 (UDP-glucose glycoprotein glucosyltransferase 1) - Rat Genome Database

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Gene: Uggt1 (UDP-glucose glycoprotein glucosyltransferase 1) Rattus norvegicus
Analyze
Symbol: Uggt1
Name: UDP-glucose glycoprotein glucosyltransferase 1
RGD ID: 619710
Description: Enables UDP-glucose:glycoprotein glucosyltransferase activity and unfolded protein binding activity. Predicted to be involved in protein N-linked glycosylation via asparagine. Located in endoplasmic reticulum lumen and endoplasmic reticulum-Golgi intermediate compartment. Orthologous to human UGGT1 (UDP-glucose glycoprotein glucosyltransferase 1); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: RUGT; rUGT1; UDP--Glc:glycoprotein glucosyltransferase; UDP-glucose ceramide glucosyltransferase-like 1; UDP-glucose glycoprotein: glucosyltransferase UGGT; UDP-glucose:glycoprotein glucosyltransferase 1; Ugcgl1; Uggt; UGT1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8945,851,127 - 45,964,454 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl945,854,985 - 45,964,455 (-)EnsemblGRCr8
mRatBN7.2938,355,229 - 38,468,473 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl938,359,089 - 38,468,467 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx946,870,976 - 46,979,763 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0951,977,889 - 52,087,045 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0950,259,795 - 50,368,950 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0942,692,156 - 42,805,680 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl942,692,105 - 42,805,673 (-)Ensemblrn6Rnor6.0
Rnor_5.0942,346,274 - 42,459,780 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4935,055,040 - 35,164,194 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera936,127,195 - 36,236,339 (-)NCBICelera
RGSC_v3.1935,056,453 - 35,165,608 (-)NCBI
Cytogenetic Map9q21NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. UDP-Glc:glycoprotein glucosyltransferase recognizes structured and solvent accessible hydrophobic patches in molten globule-like folding intermediates. Caramelo JJ, etal., Proc Natl Acad Sci U S A 2003 Jan 7;100(1):86-91.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Association between the 15-kDa selenoprotein and UDP-glucose:glycoprotein glucosyltransferase in the endoplasmic reticulum of mammalian cells. Korotkov KV, etal., J Biol Chem 2001 May 4;276(18):15330-6. Epub 2001 Feb 7.
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Cloning and characterization of mammalian UDP-glucose glycoprotein: glucosyltransferase and the development of a specific substrate for this enzyme. Tessier DC, etal., Glycobiology 2000 Apr;10(4):403-12.
10. Immunolocalization of UDP-glucose:glycoprotein glucosyltransferase indicates involvement of pre-Golgi intermediates in protein quality control. Zuber C, etal., Proc Natl Acad Sci U S A. 2001 Sep 11;98(19):10710-5. Epub 2001 Sep 4.
Additional References at PubMed
PMID:1533626   PMID:10694380   PMID:12671684   PMID:14730348   PMID:15861139   PMID:19199708   PMID:19222173   PMID:23349634   PMID:25931508  


Genomics

Comparative Map Data
Uggt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8945,851,127 - 45,964,454 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl945,854,985 - 45,964,455 (-)EnsemblGRCr8
mRatBN7.2938,355,229 - 38,468,473 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl938,359,089 - 38,468,467 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx946,870,976 - 46,979,763 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0951,977,889 - 52,087,045 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0950,259,795 - 50,368,950 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0942,692,156 - 42,805,680 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl942,692,105 - 42,805,673 (-)Ensemblrn6Rnor6.0
Rnor_5.0942,346,274 - 42,459,780 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4935,055,040 - 35,164,194 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera936,127,195 - 36,236,339 (-)NCBICelera
RGSC_v3.1935,056,453 - 35,165,608 (-)NCBI
Cytogenetic Map9q21NCBI
UGGT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382128,091,200 - 128,195,677 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2128,091,151 - 128,195,677 (+)Ensemblhg38GRCh38
GRCh372128,848,774 - 128,953,251 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362128,565,255 - 128,665,465 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342128,565,123 - 128,663,750NCBI
Celera2122,144,568 - 122,259,888 (+)NCBICelera
Cytogenetic Map2q14.3NCBI
HuRef2121,155,046 - 121,259,530 (+)NCBIHuRef
CHM1_12128,854,060 - 128,958,258 (+)NCBICHM1_1
T2T-CHM13v2.02128,527,394 - 128,631,631 (+)NCBIT2T-CHM13v2.0
Uggt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39136,179,109 - 36,283,407 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl136,179,108 - 36,283,801 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38136,140,028 - 36,244,320 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl136,140,027 - 36,244,720 (-)Ensemblmm10GRCm38
MGSCv37136,196,873 - 36,301,147 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36136,088,034 - 36,188,795 (-)NCBIMGSCv36mm8
Celera135,925,950 - 36,030,076 (-)NCBICelera
Cytogenetic Map1BNCBI
cM Map115.15NCBI
Uggt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554592,347,946 - 2,461,392 (-)Ensembl
ChiLan1.0NW_0049554592,347,946 - 2,461,174 (-)NCBIChiLan1.0ChiLan1.0
UGGT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21347,440,079 - 47,546,992 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B47,455,055 - 47,561,968 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B32,071,319 - 32,178,207 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B128,761,281 - 128,864,923 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B128,761,281 - 128,864,923 (+)EnsemblpanPan2panpan1.1
UGGT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11922,415,392 - 22,538,937 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1922,419,460 - 22,538,866 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1922,662,335 - 22,786,173 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01923,743,972 - 23,865,678 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1923,747,535 - 23,865,686 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11922,397,247 - 22,520,463 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01922,640,922 - 22,765,085 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01923,772,315 - 23,896,128 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Uggt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530398,370,208 - 98,477,258 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646943,140,455 - 43,247,539 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493646943,140,469 - 43,247,486 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UGGT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1559,141,639 - 59,265,047 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11559,141,582 - 59,265,053 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21565,884,854 - 65,977,064 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UGGT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1102,040,102 - 2,145,011 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl102,038,397 - 2,144,963 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606120,619,980 - 20,727,663 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Uggt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473217,279,254 - 17,415,628 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473217,274,731 - 17,379,634 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Uggt1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v14112,346,168 - 112,456,592 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Uggt1
859 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:209
Count of miRNA genes:144
Interacting mature miRNAs:162
Transcripts:ENSRNOT00000020558
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)9671488884474983Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9534647950346479Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)94002992585029925Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9875049253750492Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)93125043268875676Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)94445825699506504Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)92956766474567664Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)94445825685262605Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92956766483835942Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)94172029586720295Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9621499551214995Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9875049253750492Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)93125043265651574Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)944458256121768150Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9534647950416711Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)92103143049025574Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)93922018684220186Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)94002992585029925Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9621499551214995Rat
1598823Memor16Memory QTL 161.9exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)93145606157460683Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)93496059079960590Rat

Markers in Region
D9Rat147  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2938,368,067 - 38,368,227 (+)MAPPERmRatBN7.2
Rnor_6.0942,704,993 - 42,705,152NCBIRnor6.0
Rnor_5.0942,359,111 - 42,359,270UniSTSRnor5.0
RGSC_v3.4935,064,016 - 35,064,176RGDRGSC3.4
RGSC_v3.4935,064,017 - 35,064,176UniSTSRGSC3.4
Celera936,136,172 - 36,136,331UniSTS
RGSC_v3.1935,065,430 - 35,065,590RGD
FHH x ACI Map926.86RGD
FHH x ACI Map926.86UniSTS
Cytogenetic Map9q21UniSTS
RH124983  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2938,393,910 - 38,393,992 (+)MAPPERmRatBN7.2
Rnor_6.0942,730,972 - 42,731,053NCBIRnor6.0
Rnor_5.0942,385,090 - 42,385,171UniSTSRnor5.0
RGSC_v3.4935,089,858 - 35,089,939UniSTSRGSC3.4
Celera936,162,014 - 36,162,095UniSTS
Cytogenetic Map9q21UniSTS
UGCGL1  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8945,888,410 - 45,889,057 (+)Marker Load Pipeline
mRatBN7.2938,392,518 - 38,393,165 (+)MAPPERmRatBN7.2
Rnor_6.0942,729,580 - 42,730,226NCBIRnor6.0
Rnor_5.0942,383,698 - 42,384,344UniSTSRnor5.0
RGSC_v3.4935,088,466 - 35,089,112UniSTSRGSC3.4
Celera936,160,622 - 36,161,268UniSTS
Cytogenetic Map9q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000020558   ⟹   ENSRNOP00000020558
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl945,854,985 - 45,964,455 (-)Ensembl
mRatBN7.2 Ensembl938,359,089 - 38,468,467 (-)Ensembl
Rnor_6.0 Ensembl942,692,105 - 42,805,673 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000107876   ⟹   ENSRNOP00000080848
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl945,854,985 - 45,964,455 (-)Ensembl
mRatBN7.2 Ensembl938,359,089 - 38,468,467 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000116243   ⟹   ENSRNOP00000089531
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl945,857,431 - 45,956,545 (-)Ensembl
mRatBN7.2 Ensembl938,361,535 - 38,460,657 (-)Ensembl
RefSeq Acc Id: NM_133596   ⟹   NP_598280
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8945,854,985 - 45,964,140 (-)NCBI
mRatBN7.2938,359,089 - 38,468,251 (-)NCBI
Rnor_6.0942,696,016 - 42,805,460 (-)NCBI
Rnor_5.0942,346,274 - 42,459,780 (-)NCBI
RGSC_v3.4935,055,040 - 35,164,194 (-)RGD
Celera936,127,195 - 36,236,339 (-)RGD
Sequence:
RefSeq Acc Id: XM_006244735   ⟹   XP_006244797
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8945,851,127 - 45,964,454 (-)NCBI
mRatBN7.2938,355,229 - 38,468,473 (-)NCBI
Rnor_6.0942,692,156 - 42,805,680 (-)NCBI
Rnor_5.0942,346,274 - 42,459,780 (-)NCBI
Sequence:
RefSeq Acc Id: NP_598280   ⟸   NM_133596
- Peptide Label: precursor
- UniProtKB: Q9JLA3 (UniProtKB/Swiss-Prot),   A6INC3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006244797   ⟸   XM_006244735
- Peptide Label: isoform X1
- UniProtKB: Q9JLA3 (UniProtKB/Swiss-Prot),   A0A8I5ZR75 (UniProtKB/TrEMBL),   A6INC3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000020558   ⟸   ENSRNOT00000020558
Ensembl Acc Id: ENSRNOP00000080848   ⟸   ENSRNOT00000107876
Ensembl Acc Id: ENSRNOP00000089531   ⟸   ENSRNOT00000116243
Protein Domains
Glucosyltransferase 24 catalytic   UDP-glucose:glycoprotein glucosyltransferase   UGGT thioredoxin-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9JLA3-F1-model_v2 AlphaFold Q9JLA3 1-1551 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696598
Promoter ID:EPDNEW_R7123
Type:initiation region
Name:Uggt1_1
Description:UDP-glucose glycoprotein glucosyltransferase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0942,805,539 - 42,805,599EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:619710 AgrOrtholog
BioCyc Gene G2FUF-27827 BioCyc
Ensembl Genes ENSRNOG00000014901 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000020558 ENTREZGENE
  ENSRNOT00000020558.6 UniProtKB/Swiss-Prot
  ENSRNOT00000107876 ENTREZGENE
Gene3D-CATH Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A UniProtKB/Swiss-Prot
InterPro Glyco_transf_24 UniProtKB/Swiss-Prot
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot
  UDP-g_GGtrans UniProtKB/Swiss-Prot
  UGGT_TRXL_1 UniProtKB/Swiss-Prot
  UGGT_TRXL_2 UniProtKB/Swiss-Prot
  UGGT_TRXL_3 UniProtKB/Swiss-Prot
  UGGT_TRXL_4 UniProtKB/Swiss-Prot
KEGG Report rno:171129 UniProtKB/Swiss-Prot
NCBI Gene 171129 ENTREZGENE
PANTHER PTHR11226 UniProtKB/Swiss-Prot
  UDP-GLUCOSE:GLYCOPROTEIN GLUCOSYLTRANSFERASE 1 UniProtKB/Swiss-Prot
Pfam Glyco_transf_24 UniProtKB/Swiss-Prot
  Thioredoxin_12 UniProtKB/Swiss-Prot
  Thioredoxin_13 UniProtKB/Swiss-Prot
  Thioredoxin_14 UniProtKB/Swiss-Prot
  Thioredoxin_15 UniProtKB/Swiss-Prot
  UDP-g_GGTase UniProtKB/Swiss-Prot
PhenoGen Uggt1 PhenoGen
PROSITE ER_TARGET UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000014901 RatGTEx
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot
UniProt A0A8I5ZR75 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AAI4_RAT UniProtKB/TrEMBL
  A6INC3 ENTREZGENE, UniProtKB/TrEMBL
  Q9JLA3 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-05-07 Uggt1  UDP-glucose glycoprotein glucosyltransferase 1  Ugcgl1  UDP-glucose ceramide glucosyltransferase-like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Ugcgl1  UDP-glucose ceramide glucosyltransferase-like 1  Uggt  UDP-glucose glycoprotein: glucosyltransferase UGGT  Symbol and Name updated 1299863 APPROVED
2002-08-07 Uggt  UDP-glucose glycoprotein: glucosyltransferase UGGT      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_cellular_localization localized to the endoplasmic reticulum 634448