Trhr (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 7 | 77,233,175 - 77,277,988 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 7 | 77,233,354 - 77,277,987 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 7 | 75,348,672 - 75,393,310 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 75,348,672 - 75,393,309 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 7 | 77,174,030 - 77,218,735 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 79,376,541 - 79,421,226 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 79,269,664 - 79,314,345 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 83,113,641 - 83,153,520 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 83,113,672 - 83,153,519 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 83,121,134 - 83,161,215 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 7 | 80,050,671 - 80,095,991 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 7 | 72,334,405 - 72,378,742 (+) | NCBI | | Celera | | | RGSC_v3.1 | 7 | 80,071,435 - 80,116,717 (+) | NCBI | | | | | Cytogenetic Map | 7 | q31 | NCBI | | | | |
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TRHR (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 8 | 109,086,585 - 109,121,565 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 109,086,585 - 109,121,565 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 8 | 110,098,814 - 110,133,794 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 110,168,900 - 110,200,989 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 110,168,901 - 110,200,989 | NCBI | | | | | Celera | 8 | 106,287,347 - 106,319,484 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q23.1 | NCBI | | | | | HuRef | 8 | 105,421,383 - 105,453,868 (+) | NCBI | | HuRef | | | CHM1_1 | 8 | 110,139,931 - 110,172,069 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 110,215,119 - 110,250,098 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Trhr (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 15 | 44,059,314 - 44,099,308 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 44,059,531 - 44,099,308 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 15 | 44,195,924 - 44,235,912 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 44,196,135 - 44,235,912 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 15 | 44,027,681 - 44,067,458 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 44,026,307 - 44,065,986 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 44,658,539 - 44,700,386 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | B3.2 | NCBI | | | | | cM Map | 15 | 16.82 | NCBI | | | | |
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Trhr (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955417 | 16,529,293 - 16,565,359 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955417 | 16,529,293 - 16,565,359 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TRHR (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 7 | 126,461,619 - 126,504,116 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 101,984,988 - 102,020,610 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 105,739,651 - 105,780,470 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 107,886,593 - 107,918,825 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 107,886,593 - 107,918,825 (+) | Ensembl | | | panPan2 | panpan1.1 |
|
TRHR (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 13 | 9,642,565 - 9,681,778 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 9,642,387 - 9,674,831 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 9,626,666 - 9,666,386 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 9,923,346 - 9,963,040 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 9,923,867 - 9,956,094 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 13 | 9,666,106 - 9,705,368 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 9,782,697 - 9,821,730 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 9,871,822 - 9,911,555 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Trhr (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024405303 | 28,375,898 - 28,418,063 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936470 | 35,806,397 - 35,844,267 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936470 | 35,808,569 - 35,844,062 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
TRHR (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 4 | 28,436,758 - 28,482,893 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 28,480,637 - 28,482,031 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 30,819,213 - 31,155,972 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
TRHR (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 8 | 103,798,423 - 103,835,284 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 103,800,175 - 103,831,628 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666039 | 36,743,423 - 36,777,184 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Trhr (Heterocephalus glaber - naked mole-rat) |
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Trhr (Rattus rattus - black rat) |
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