Nemf (nuclear export mediator factor) - Rat Genome Database

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Gene: Nemf (nuclear export mediator factor) Rattus norvegicus
Analyze
Symbol: Nemf (Ensembl: AABR07064719.2)
Name: nuclear export mediator factor
RGD ID: 2315525
Description: Predicted to enable alpha-aminoacyl-tRNA binding activity and ribosomal large subunit binding activity. Predicted to be involved in CAT tailing; nuclear export; and protein-containing complex assembly. Predicted to act upstream of or within rescue of stalled ribosome; tRNA 3'-terminal CCA addition; and ubiquitin-dependent protein catabolic process via the C-end degron rule pathway. Predicted to be located in cytosol. Predicted to be part of RQC complex. Predicted to be active in cytosolic ribosome. Orthologous to human NEMF (nuclear export mediator factor); INTERACTS WITH 2,6-dinitrotoluene; acrylamide; amitrole.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: nuclear export mediator factor NEMF; ribosome quality control complex subunit NEMF; Sdccag1; serologically defined colon cancer antigen 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Sdccag1-ps1  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8693,527,690 - 93,571,863 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl693,527,704 - 93,571,863 (-)EnsemblGRCr8
mRatBN7.2687,791,650 - 87,835,826 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl687,791,656 - 87,835,841 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx688,190,715 - 88,235,069 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0688,490,148 - 88,534,500 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0687,929,905 - 87,974,257 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0691,611,021 - 91,676,394 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06101,068,660 - 101,132,712 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4691,276,394 - 91,319,734 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera686,289,001 - 86,333,626 (-)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IEA,ISO)
cytosolic ribosome  (IEA,ISO)
nucleus  (IEA)
RQC complex  (IBA,IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. A brain-derived MeCP2 complex supports a role for MeCP2 in RNA processing. Long SW, etal., Biosci Rep. 2011 Oct 1;31(5):333-43. doi: 10.1042/BSR20100124.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10025504   PMID:12477932   PMID:15632090   PMID:16103875  


Genomics

Comparative Map Data
Nemf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8693,527,690 - 93,571,863 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl693,527,704 - 93,571,863 (-)EnsemblGRCr8
mRatBN7.2687,791,650 - 87,835,826 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl687,791,656 - 87,835,841 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx688,190,715 - 88,235,069 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0688,490,148 - 88,534,500 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0687,929,905 - 87,974,257 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0691,611,021 - 91,676,394 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06101,068,660 - 101,132,712 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4691,276,394 - 91,319,734 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera686,289,001 - 86,333,626 (-)NCBICelera
Cytogenetic Map6q24NCBI
NEMF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381449,782,083 - 49,852,788 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1449,782,083 - 49,852,822 (-)Ensemblhg38GRCh38
GRCh371450,248,801 - 50,319,506 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361449,320,282 - 49,389,289 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341449,320,282 - 49,389,289NCBI
Celera1430,118,228 - 30,186,686 (-)NCBICelera
Cytogenetic Map14q21.3NCBI
HuRef1430,375,757 - 30,444,509 (-)NCBIHuRef
CHM1_11450,189,108 - 50,257,797 (-)NCBICHM1_1
T2T-CHM13v2.01443,987,877 - 44,058,011 (-)NCBIT2T-CHM13v2.0
Nemf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391269,358,315 - 69,403,975 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1269,357,296 - 69,403,939 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381269,311,541 - 69,357,201 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1269,310,522 - 69,357,165 (-)Ensemblmm10GRCm38
MGSCv371270,412,530 - 70,458,153 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361270,230,148 - 70,275,771 (-)NCBIMGSCv36mm8
Celera1270,409,762 - 70,455,395 (-)NCBICelera
Cytogenetic Map12C2NCBI
cM Map1228.78NCBI
Nemf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540912,855,749 - 12,900,702 (+)Ensembl
ChiLan1.0NW_00495540912,855,655 - 12,901,673 (+)NCBIChiLan1.0ChiLan1.0
NEMF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21550,917,346 - 50,988,160 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11450,135,272 - 50,205,013 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01430,372,390 - 30,441,660 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11448,679,252 - 48,748,258 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1448,679,252 - 48,748,258 (-)EnsemblpanPan2panpan1.1
NEMF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1826,364,664 - 26,411,475 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl826,364,838 - 26,411,424 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha826,113,773 - 26,165,138 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0826,537,351 - 26,588,734 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl826,542,548 - 26,588,859 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1826,192,975 - 26,244,344 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0826,266,156 - 26,317,640 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0826,583,882 - 26,635,227 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Nemf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864058,428,777 - 58,479,125 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936583209,813 - 255,131 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936583209,818 - 255,439 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NEMF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1179,622,755 - 179,670,996 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11179,622,728 - 179,671,225 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21199,958,280 - 200,005,937 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NEMF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12426,834,457 - 26,906,668 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2426,835,305 - 26,906,564 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605315,159,608 - 15,230,852 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nemf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473118,917,191 - 18,961,764 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473118,917,097 - 18,963,490 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Nemf
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1782,974,275 - 83,021,959 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Nemf
315 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:259
Count of miRNA genes:168
Interacting mature miRNAs:198
Transcripts:ENSRNOT00000029880
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)671278722116278722Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)664367996109367996Rat
2293088Iddm28Insulin dependent diabetes mellitus QTL 285.21blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)668767270135411972Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)688019181136741135Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)690871046135871046Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)693560258136550638Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)66345744194939581Rat
4889933Bss88Bone structure and strength QTL 883.8tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)65368492198684921Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)679198463144254945Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)646050607116278722Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)686867923110125012Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)684490437129490437Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)686867923110125012Rat
4889848Pur25Proteinuria QTL 25140.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)66303731995934232Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)690871046135871046Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)693560258136550638Rat
5684963Bss99Bone structure and strength QTL 993.1tibia area (VT:1000281)tibia area measurement (CMO:0001382)65368492198684921Rat
5684992Bmd83Bone mineral density QTL 824.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)65368492198684921Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)678204640123204640Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)693560258136550638Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)676937178121937178Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)686494122112380234Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)66345744194939581Rat

Markers in Region
RH144072  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8693,527,979 - 93,528,228 (+)Marker Load Pipeline
mRatBN7.2687,791,939 - 87,792,188 (+)MAPPERmRatBN7.2
Rnor_6.0691,611,311 - 91,611,559NCBIRnor6.0
Rnor_5.06101,068,950 - 101,069,198UniSTSRnor5.0
RGSC_v3.4691,275,151 - 91,275,399UniSTSRGSC3.4
Celera686,289,291 - 86,289,539UniSTS
RH 3.4 Map6627.1UniSTS
AU022198  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2687,791,311 - 87,791,510 (+)MAPPERmRatBN7.2
mRatBN7.2X67,673,699 - 67,673,898 (+)MAPPERmRatBN7.2
Rnor_6.0X72,449,832 - 72,450,030NCBIRnor6.0
Rnor_6.0691,610,683 - 91,610,881NCBIRnor6.0
Rnor_5.06101,068,322 - 101,068,520UniSTSRnor5.0
Rnor_5.0X73,291,717 - 73,291,915UniSTSRnor5.0
RGSC_v3.4X90,625,288 - 90,625,486UniSTSRGSC3.4
RGSC_v3.4691,274,523 - 91,274,721UniSTSRGSC3.4
Celera686,288,663 - 86,288,861UniSTS
CeleraX68,027,084 - 68,027,282UniSTS
Cytogenetic MapXq31UniSTS
Cytogenetic Map6q24UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
hemolymphoid system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
sensory system
visual system
9 2 29 93 119 230 164 18 95 57 48 33 33

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001170586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AI058275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC089999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF387383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ204739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA507359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA512507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB545170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB694542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB756993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO386317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM071452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM096492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ205447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000083872   ⟹   ENSRNOP00000074974
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl693,540,341 - 93,571,863 (-)Ensembl
mRatBN7.2 Ensembl687,804,301 - 87,835,841 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000093963   ⟹   ENSRNOP00000089887
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl693,527,704 - 93,571,518 (-)Ensembl
mRatBN7.2 Ensembl687,791,656 - 87,835,655 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098306   ⟹   ENSRNOP00000084632
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl693,527,704 - 93,571,863 (-)Ensembl
mRatBN7.2 Ensembl687,791,656 - 87,835,841 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000108891   ⟹   ENSRNOP00000097296
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl693,527,704 - 93,571,348 (-)Ensembl
mRatBN7.2 Ensembl687,791,656 - 87,835,627 (-)Ensembl
RefSeq Acc Id: NM_001170586   ⟹   NP_001164057
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8693,527,690 - 93,571,863 (-)NCBI
mRatBN7.2687,791,650 - 87,835,826 (-)NCBI
Rnor_6.0691,611,021 - 91,676,394 (-)NCBI
Rnor_5.06101,068,660 - 101,132,712 (-)NCBI
Celera686,289,001 - 86,333,626 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001164057 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH89999 (Get FASTA)   NCBI Sequence Viewer  
  EDM03517 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000074974.2
  ENSRNOP00000084632
  ENSRNOP00000084632.1
  ENSRNOP00000089887.1
  ENSRNOP00000097296.1
RefSeq Acc Id: NP_001164057   ⟸   NM_001170586
- UniProtKB: A0A8I6A2E1 (UniProtKB/TrEMBL),   A0A8I6ARH7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000084632   ⟸   ENSRNOT00000098306
Ensembl Acc Id: ENSRNOP00000089887   ⟸   ENSRNOT00000093963
Ensembl Acc Id: ENSRNOP00000074974   ⟸   ENSRNOT00000083872
Ensembl Acc Id: ENSRNOP00000097296   ⟸   ENSRNOT00000108891
Protein Domains
NFACT protein C-terminal   NFACT RNA-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K9F2-F1-model_v2 AlphaFold A0A0G2K9F2 1-781 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2315525 AgrOrtholog
BioCyc Gene G2FUF-37252 BioCyc
Ensembl Genes ENSRNOG00000056128 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000083872.3 UniProtKB/TrEMBL
  ENSRNOT00000093963.2 UniProtKB/TrEMBL
  ENSRNOT00000098306 ENTREZGENE
  ENSRNOT00000098306.2 UniProtKB/TrEMBL
  ENSRNOT00000108891.2 UniProtKB/TrEMBL
Gene3D-CATH ibrinogen binding protein from staphylococcus aureus domain UniProtKB/TrEMBL
InterPro NFACT-C UniProtKB/TrEMBL
  NFACT_RNA-bd UniProtKB/TrEMBL
  RQC_Subunit_NEMF UniProtKB/TrEMBL
NCBI Gene 100322884 ENTREZGENE
PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF UniProtKB/TrEMBL
  NUCLEAR EXPORT MEDIATOR FACTOR NEMF UniProtKB/TrEMBL
Pfam NFACT-C UniProtKB/TrEMBL
  NFACT-R_1 UniProtKB/TrEMBL
  NFACT_N UniProtKB/TrEMBL
PhenoGen Nemf PhenoGen
RatGTEx ENSRNOG00000056128 RatGTEx
UniProt A0A0G2K9F2_RAT UniProtKB/TrEMBL
  A0A8I6A2E1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A9M7_RAT UniProtKB/TrEMBL
  A0A8I6ARH7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-16 Nemf  nuclear export mediator factor  Sdccag1  serologically defined colon cancer antigen 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED