Dnai1 (dynein, axonemal, intermediate chain 1) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Dnai1 (dynein, axonemal, intermediate chain 1) Rattus norvegicus
Analyze
Symbol: Dnai1
Name: dynein, axonemal, intermediate chain 1
RGD ID: 1565671
Description: Predicted to enable dynein heavy chain binding activity and dynein light chain binding activity. Predicted to be involved in cilium movement; insulin receptor signaling pathway; and outer dynein arm assembly. Predicted to act upstream of or within several processes, including determination of left/right symmetry; epithelial cilium movement involved in extracellular fluid movement; and flagellated sperm motility. Predicted to be located in several cellular components, including 9+2 motile cilium; centrosome; and glial cell projection. Predicted to be part of outer dynein arm. Human ortholog(s) of this gene implicated in Kartagener syndrome and primary ciliary dyskinesia 1. Orthologous to human DNAI1 (dynein axonemal intermediate chain 1); PARTICIPATES IN Huntington's disease pathway; INTERACTS WITH 1,2-dimethylhydrazine; 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: axonemal dynein intermediate chain 1; Dnaic1; dynein axonemal intermediate chain 1; dynein intermediate chain 1, axonemal; LOC500442; similar to dynein, axonemal, intermediate chain 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8561,526,079 - 61,596,806 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl561,525,999 - 61,596,810 (+)EnsemblGRCr8
mRatBN7.2556,730,179 - 56,800,926 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl556,730,179 - 56,800,925 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx558,712,718 - 58,782,367 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0560,531,521 - 60,601,189 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0560,512,217 - 60,587,674 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0557,947,796 - 58,017,985 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl557,947,716 - 58,017,992 (+)Ensemblrn6Rnor6.0
Rnor_5.0562,474,510 - 62,544,535 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4558,988,981 - 59,060,130 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera555,325,994 - 55,398,000 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Axonemal dynein intermediate-chain gene (DNAI1) mutations result in situs inversus and primary ciliary dyskinesia (Kartagener syndrome). Guichard C, etal., Am J Hum Genet. 2001 Apr;68(4):1030-5. Epub 2001 Feb 23.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
9. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
10. Molecular motors implicated in the axonal transport of tau and alpha-synuclein. Utton MA, etal., J Cell Sci. 2005 Oct 15;118(Pt 20):4645-54. Epub 2005 Sep 21.
Additional References at PubMed
PMID:15489334   PMID:15750039   PMID:16858015   PMID:17515466   PMID:18492703   PMID:18950741   PMID:20498047   PMID:22499950   PMID:25807483   PMID:27120127   PMID:28057765  


Genomics

Comparative Map Data
Dnai1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8561,526,079 - 61,596,806 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl561,525,999 - 61,596,810 (+)EnsemblGRCr8
mRatBN7.2556,730,179 - 56,800,926 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl556,730,179 - 56,800,925 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx558,712,718 - 58,782,367 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0560,531,521 - 60,601,189 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0560,512,217 - 60,587,674 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0557,947,796 - 58,017,985 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl557,947,716 - 58,017,992 (+)Ensemblrn6Rnor6.0
Rnor_5.0562,474,510 - 62,544,535 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4558,988,981 - 59,060,130 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera555,325,994 - 55,398,000 (+)NCBICelera
Cytogenetic Map5q22NCBI
DNAI1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38934,458,805 - 34,520,984 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl934,457,414 - 34,520,988 (+)Ensemblhg38GRCh38
GRCh37934,458,803 - 34,520,982 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36934,448,811 - 34,510,982 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34934,448,810 - 34,510,981NCBI
Celera934,390,311 - 34,452,482 (+)NCBICelera
Cytogenetic Map9p13.3NCBI
HuRef934,413,082 - 34,475,335 (+)NCBIHuRef
CHM1_1934,458,532 - 34,520,778 (+)NCBICHM1_1
T2T-CHM13v2.0934,477,326 - 34,539,522 (+)NCBIT2T-CHM13v2.0
Dnai1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39441,569,731 - 41,638,158 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl441,569,775 - 41,638,158 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38441,569,647 - 41,638,158 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl441,569,775 - 41,638,158 (+)Ensemblmm10GRCm38
MGSCv37441,516,827 - 41,585,191 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36441,758,465 - 41,826,821 (+)NCBIMGSCv36mm8
Celera441,231,484 - 41,300,976 (+)NCBICelera
Cytogenetic Map4A5NCBI
cM Map421.75NCBI
Dnai1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554721,599,493 - 1,668,024 (-)Ensembl
ChiLan1.0NW_0049554721,599,265 - 1,668,214 (-)NCBIChiLan1.0ChiLan1.0
DNAI1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21190,083,046 - 90,145,795 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1990,088,986 - 90,151,735 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0934,295,010 - 34,357,331 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1935,104,297 - 35,167,454 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl935,104,297 - 35,167,454 (+)EnsemblpanPan2panpan1.1
DNAI1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11151,080,080 - 51,205,381 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1151,106,370 - 51,237,467 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1149,709,714 - 49,834,590 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01152,022,142 - 52,146,931 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1152,086,129 - 52,212,664 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11150,684,829 - 50,809,688 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01150,552,931 - 50,677,839 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01151,317,729 - 51,442,601 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dnai1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947165,961,982 - 166,078,975 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365242,572,956 - 2,614,026 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365242,551,431 - 2,614,245 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAI1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1032,275,175 - 32,355,399 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11032,275,173 - 32,355,444 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21036,414,541 - 36,430,131 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DNAI1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11246,058,280 - 46,155,989 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1246,090,829 - 46,128,839 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603843,207,678 - 43,272,504 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnai1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473638,859,050 - 38,922,097 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473638,858,918 - 38,922,092 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Dnai1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v113,913,558 - 3,981,360 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Dnai1
500 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:109
Count of miRNA genes:81
Interacting mature miRNAs:86
Transcripts:ENSRNOT00000067657
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)53275164977751649Rat
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53801167083011670Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)55266537294894052Rat
6907115Mcs29Mammary carcinoma susceptibility QTL 29mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)53800433183004331Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)544924861153890773Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)52367149379046465Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)538207390136631402Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51757663362576633Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)548523123134369373Rat
1598807Glom12Glomerulus QTL 122.7kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)53801167083011670Rat
1302786Kidm8Kidney mass QTL 828.15kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)53801167083011670Rat
1331782Rf36Renal function QTL 363.296kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)539019942102105896Rat
6903292Stl28Serum triglyceride level QTL 282.60.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)53331167378311673Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)551657967166600247Rat
1578767Stresp17Stress response QTL 174.30.01blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)53275164977751649Rat
1641922Alcrsp8Alcohol response QTL 8alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)51748608062486080Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555124766172190305Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)53998594884985948Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)5692228281330203Rat
6903306Scl35Serum cholesterol QTL 352.60.0073blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53331167378311673Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)53952692484526924Rat
1331773Scl26Serum cholesterol level QTL 263.065blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)54852312391770353Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)560601597137492949Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)51001906491770353Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)560511627105511627Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5706553574335773Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)536460764136631402Rat
1641903Alcrsp3Alcohol response QTL 3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)51748608062486080Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)51001906487027358Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52602321171023211Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)556546393101546393Rat
1600358Mamtr5Mammary tumor resistance QTL 5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)52367149368671493Rat

Markers in Region
D5Got282  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8561,541,519 - 61,541,753 (+)Marker Load Pipeline
mRatBN7.2556,745,624 - 56,745,858 (+)MAPPERmRatBN7.2
Rnor_6.0557,963,238 - 57,963,471NCBIRnor6.0
Rnor_5.0562,489,951 - 62,490,184UniSTSRnor5.0
RGSC_v3.4559,004,422 - 59,004,655UniSTSRGSC3.4
Celera555,341,435 - 55,341,668UniSTS
Cytogenetic Map5q22UniSTS
D5Cebr3  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2556,781,193 - 56,781,493 (+)MAPPERmRatBN7.2
Rnor_6.0557,998,801 - 57,999,098NCBIRnor6.0
Rnor_5.0562,525,322 - 62,525,619UniSTSRnor5.0
RGSC_v3.4559,040,824 - 59,041,121UniSTSRGSC3.4
Celera555,376,925 - 55,377,222UniSTS
Cytogenetic Map5q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
10 8 34 145 71 70 39 19 39 6 172 77 7 125 40 86 31 12 12

Sequence


Ensembl Acc Id: ENSRNOT00000067657   ⟹   ENSRNOP00000059516
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl561,525,999 - 61,596,810 (+)Ensembl
mRatBN7.2 Ensembl556,730,179 - 56,800,925 (+)Ensembl
Rnor_6.0 Ensembl557,947,716 - 58,017,992 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000136386   ⟹   ENSRNOP00000104670
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl561,525,999 - 61,592,278 (+)Ensembl
RefSeq Acc Id: NM_001024342   ⟹   NP_001019513
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8561,526,079 - 61,596,806 (+)NCBI
mRatBN7.2556,730,179 - 56,800,926 (+)NCBI
Rnor_6.0557,947,796 - 58,017,985 (+)NCBI
Rnor_5.0562,474,510 - 62,544,535 (+)NCBI
RGSC_v3.4558,988,981 - 59,060,130 (+)RGD
Celera555,325,994 - 55,398,000 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001019513 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH83662 (Get FASTA)   NCBI Sequence Viewer  
  EDL98681 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000059516
  ENSRNOP00000059516.1
GenBank Protein Q5XIL8 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001019513   ⟸   NM_001024342
- UniProtKB: Q5XIL8 (UniProtKB/Swiss-Prot),   A6IIW1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000059516   ⟸   ENSRNOT00000067657
Ensembl Acc Id: ENSRNOP00000104670   ⟸   ENSRNOT00000136386

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5XIL8-F1-model_v2 AlphaFold Q5XIL8 1-705 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693653
Promoter ID:EPDNEW_R4178
Type:single initiation site
Name:Dnai1_1
Description:dynein, axonemal, intermediate chain 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0557,947,757 - 57,947,817EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565671 AgrOrtholog
BioCyc Gene G2FUF-41554 BioCyc
Ensembl Genes ENSRNOG00000013734 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000067657 ENTREZGENE
  ENSRNOT00000067657.3 UniProtKB/Swiss-Prot
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7135392 IMAGE-MGC_LOAD
InterPro Dynein_IC UniProtKB/Swiss-Prot
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot
  WD40_repeat UniProtKB/Swiss-Prot
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:500442 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94497 IMAGE-MGC_LOAD
NCBI Gene 500442 ENTREZGENE
PANTHER DYNEIN AXONEMAL INTERMEDIATE CHAIN 1 UniProtKB/Swiss-Prot
  DYNEIN INTERMEDIATE CHAIN UniProtKB/Swiss-Prot
Pfam WD40 UniProtKB/Swiss-Prot
PhenoGen Dnai1 PhenoGen
PROSITE WD_REPEATS_2 UniProtKB/Swiss-Prot
  WD_REPEATS_REGION UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000013734 RatGTEx
SMART WD40 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot
UniProt A0ABK0LGM0_RAT UniProtKB/TrEMBL
  A6IIW1 ENTREZGENE, UniProtKB/TrEMBL
  DNAI1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-10-17 Dnai1  dynein, axonemal, intermediate chain 1  Dnaic1  dynein, axonemal, intermediate chain 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-05 Dnaic1  dynein, axonemal, intermediate chain 1  LOC500442  similar to dynein, axonemal, intermediate chain 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-02-09 LOC500442  similar to dynein, axonemal, intermediate chain 1      Symbol and Name status set to provisional 70820 PROVISIONAL