Dcp1a (decapping mRNA 1A) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Dcp1a (decapping mRNA 1A) Rattus norvegicus
Analyze
Symbol: Dcp1a
Name: decapping mRNA 1A
RGD ID: 1561298
Description: Enables kinesin binding activity. Predicted to be involved in deadenylation-dependent decapping of nuclear-transcribed mRNA; deadenylation-independent decapping of nuclear-transcribed mRNA; and protein localization to cytoplasmic stress granule. Located in dendrite. Orthologous to human DCP1A (decapping mRNA 1A); PARTICIPATES IN RNA degradation pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; bisphenol A; gentamycin.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DCP1 decapping enzyme homolog A (S. cerevisiae); LOC361109; mRNA-decapping enzyme 1A; RGD1561298; similar to transcription factor; test2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8165,663,437 - 5,708,623 (+)NCBIGRCr8
mRatBN7.2165,656,960 - 5,702,151 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl165,656,773 - 5,702,140 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx165,669,169 - 5,710,742 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0166,814,620 - 6,856,195 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0165,667,742 - 5,709,322 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0166,542,415 - 6,583,856 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl166,542,216 - 6,587,619 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0166,476,320 - 6,517,715 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4165,840,678 - 5,883,381 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera169,490,489 - 9,531,406 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Dendrites of mammalian neurons contain specialized P-body-like structures that respond to neuronal activation. Cougot N, etal., J Neurosci. 2008 Dec 17;28(51):13793-804. doi: 10.1523/JNEUROSCI.4155-08.2008.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Activity-dependent synaptic localization of processing bodies and their role in dendritic structural plasticity. Oh JY, etal., J Cell Sci. 2013 May 1;126(Pt 9):2114-23. doi: 10.1242/jcs.125690. Epub 2013 Mar 13.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:16364915   PMID:18625844   PMID:19861488   PMID:19946888   PMID:19966221   PMID:22745163   PMID:24965446  


Genomics

Comparative Map Data
Dcp1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8165,663,437 - 5,708,623 (+)NCBIGRCr8
mRatBN7.2165,656,960 - 5,702,151 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl165,656,773 - 5,702,140 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx165,669,169 - 5,710,742 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0166,814,620 - 6,856,195 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0165,667,742 - 5,709,322 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0166,542,415 - 6,583,856 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl166,542,216 - 6,587,619 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0166,476,320 - 6,517,715 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4165,840,678 - 5,883,381 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera169,490,489 - 9,531,406 (-)NCBICelera
Cytogenetic Map16p16NCBI
DCP1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38353,283,429 - 53,347,543 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl353,283,429 - 53,347,586 (-)EnsemblGRCh38hg38GRCh38
GRCh37353,317,449 - 53,381,570 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36353,292,489 - 53,356,677 (-)NCBINCBI36Build 36hg18NCBI36
Build 34353,296,427 - 53,356,653NCBI
Celera353,284,637 - 53,348,841 (-)NCBICelera
Cytogenetic Map3p21.1NCBI
HuRef353,366,873 - 53,431,011 (-)NCBIHuRef
CHM1_1353,269,053 - 53,333,274 (-)NCBICHM1_1
T2T-CHM13v2.0353,316,420 - 53,380,518 (-)NCBIT2T-CHM13v2.0
Dcp1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391430,201,613 - 30,249,013 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1430,201,492 - 30,249,020 (+)EnsemblGRCm39 Ensembl
GRCm381430,479,486 - 30,527,056 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1430,479,535 - 30,527,063 (+)EnsemblGRCm38mm10GRCm38
MGSCv371431,292,751 - 31,340,242 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361429,308,621 - 29,356,065 (+)NCBIMGSCv36mm8
Celera1426,736,107 - 26,783,618 (+)NCBICelera
Cytogenetic Map14BNCBI
cM Map1418.75NCBI
Dcp1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554303,225,840 - 3,284,064 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554303,225,840 - 3,284,058 (-)NCBIChiLan1.0ChiLan1.0
DCP1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2253,280,908 - 53,346,823 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1353,285,671 - 53,351,611 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0353,231,318 - 53,291,890 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1354,449,980 - 54,514,267 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl354,449,980 - 54,514,267 (-)Ensemblpanpan1.1panPan2
DCP1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12036,597,457 - 36,661,362 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2036,597,178 - 36,657,756 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2036,533,884 - 36,597,988 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02036,875,441 - 36,939,771 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2036,875,504 - 36,939,709 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12036,312,345 - 36,376,559 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02036,674,363 - 36,738,449 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02036,888,559 - 36,952,682 (+)NCBIUU_Cfam_GSD_1.0
Dcp1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118170,861,241 - 170,912,568 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364733,995,879 - 4,051,192 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364733,998,172 - 4,051,140 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DCP1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1335,391,320 - 35,455,743 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11335,392,592 - 35,455,639 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21338,462,231 - 38,525,387 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DCP1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12214,678,611 - 14,735,688 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2214,678,429 - 14,735,619 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041152,157,995 - 152,216,954 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dcp1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248223,902,595 - 3,967,580 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248223,903,535 - 3,970,763 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dcp1a
309 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:118
Count of miRNA genes:89
Interacting mature miRNAs:95
Transcripts:ENSRNOT00000021475
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1619639137Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126727669Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
1600369Hcas8Hepatocarcinoma susceptibility QTL 8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)16122477621Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
737825Alc13Alcohol consumption QTL 134.5consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760916039848Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
1300133Rf24Renal function QTL 243.64blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)16338015021361552Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126727669Rat
61372Bp40Blood pressure QTL 402.2blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)16422773017696785Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)16285170915884239Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat

Markers in Region
RH132389  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2165,701,856 - 5,702,038 (+)MAPPERmRatBN7.2
Rnor_6.0166,587,331 - 6,587,512NCBIRnor6.0
Rnor_5.0166,521,190 - 6,521,371UniSTSRnor5.0
RGSC_v3.4165,886,856 - 5,887,037UniSTSRGSC3.4
Celera169,486,833 - 9,487,014UniSTS
RH 3.4 Map1633.3UniSTS
Cytogenetic Map16p16UniSTS
AW530962  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2165,657,536 - 5,657,687 (+)MAPPERmRatBN7.2
Rnor_6.0166,543,027 - 6,543,177NCBIRnor6.0
Rnor_5.0166,476,932 - 6,477,082UniSTSRnor5.0
RGSC_v3.4165,841,290 - 5,841,440UniSTSRGSC3.4
Celera169,530,644 - 9,530,794UniSTS
RH 3.4 Map1630.4UniSTS
Cytogenetic Map16p16UniSTS
BI276712  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2165,699,049 - 5,699,202 (+)MAPPERmRatBN7.2
Rnor_6.0166,584,524 - 6,584,676NCBIRnor6.0
Rnor_5.0166,518,383 - 6,518,535UniSTSRnor5.0
RGSC_v3.4165,884,049 - 5,884,201UniSTSRGSC3.4
Celera169,489,669 - 9,489,821UniSTS
RH 3.4 Map1616.3UniSTS
Cytogenetic Map16p16UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000021475   ⟹   ENSRNOP00000021473
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl165,656,773 - 5,702,140 (+)Ensembl
Rnor_6.0 Ensembl166,542,216 - 6,587,619 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000111266   ⟹   ENSRNOP00000096529
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl165,656,925 - 5,702,140 (+)Ensembl
RefSeq Acc Id: NM_001191831   ⟹   NP_001178760
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8165,663,437 - 5,708,623 (+)NCBI
mRatBN7.2165,656,960 - 5,702,151 (+)NCBI
Rnor_6.0166,542,415 - 6,583,856 (+)NCBI
Rnor_5.0166,476,320 - 6,517,715 (+)NCBI
Celera169,490,489 - 9,531,406 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001411752   ⟹   NP_001398681
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8165,663,437 - 5,708,623 (+)NCBI
mRatBN7.2165,656,960 - 5,702,151 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001178760 (Get FASTA)   NCBI Sequence Viewer  
  NP_001398681 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL88997 (Get FASTA)   NCBI Sequence Viewer  
  EDL88998 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000021473.4
  ENSRNOP00000096529.1
RefSeq Acc Id: NP_001178760   ⟸   NM_001191831
- Peptide Label: isoform 1
- UniProtKB: D4AE80 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000021473   ⟸   ENSRNOT00000021475
Ensembl Acc Id: ENSRNOP00000096529   ⟸   ENSRNOT00000111266
RefSeq Acc Id: NP_001398681   ⟸   NM_001411752
- Peptide Label: isoform 2
- UniProtKB: A0A8I6APY3 (UniProtKB/TrEMBL),   D4AE80 (UniProtKB/TrEMBL)
Protein Domains
mRNA-decapping enzyme C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4AE80-F1-model_v2 AlphaFold D4AE80 1-601 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1561298 AgrOrtholog
BioCyc Gene G2FUF-12194 BioCyc
Ensembl Genes ENSRNOG00000016015 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000021475.6 UniProtKB/TrEMBL
  ENSRNOT00000111266.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
  6.10.140.2030 UniProtKB/TrEMBL
InterPro DCP1 UniProtKB/TrEMBL
  mRNA_decap_C UniProtKB/TrEMBL
  PH_like_dom UniProtKB/TrEMBL
KEGG Report rno:361109 UniProtKB/TrEMBL
NCBI Gene 361109 ENTREZGENE
PANTHER DCP1 UniProtKB/TrEMBL
  MRNA-DECAPPING ENZYME 1A UniProtKB/TrEMBL
Pfam DCP1 UniProtKB/TrEMBL
  mRNA_decap_C UniProtKB/TrEMBL
PhenoGen Dcp1a PhenoGen
RatGTEx ENSRNOG00000016015 RatGTEx
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
UniProt A0A8I6APY3 ENTREZGENE, UniProtKB/TrEMBL
  D4AE80 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-09-16 Dcp1a  decapping mRNA 1A  Dcp1a  DCP1 decapping enzyme homolog A (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-06-02 Dcp1a  DCP1 decapping enzyme homolog A (S. cerevisiae)  test2  test2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-05-08     Dcp1a  DCP1 decapping enzyme homolog A (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-03 Dcp1a  DCP1 decapping enzyme homolog A (S. cerevisiae)  Dcp1a_predicted  DCP1 decapping enzyme homolog A (S. cerevisiae) (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Dcp1a_predicted  DCP1 decapping enzyme homolog A (S. cerevisiae) (predicted)  RGD1561298_predicted  similar to transcription factor (predicted)  Symbol and Name updated 1299863 APPROVED
2006-03-07 RGD1561298_predicted  similar to transcription factor (predicted)  LOC361109  similar to transcription factor  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC361109  similar to transcription factor      Symbol and Name status set to provisional 70820 PROVISIONAL