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Gene: Mknk1 (MAPK interacting serine/threonine kinase 1) Rattus norvegicus

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Symbol:

Mknk1

Name:

MAPK interacting serine/threonine kinase 1

RGD ID:

1559603

Description:

Enables protein serine/threonine kinase activity. Involved in regulation of translational initiation. Predicted to be active in cytoplasm and nucleus. Orthologous to human MKNK1 (MAPK interacting serine/threonine kinase 1); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; cyclooxygenase mediated pathway of arachidonic acid metabolism; p38 MAPK signaling pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

MAP kinase signal-integrating kinase 1; MAP kinase-interacting serine/threonine kinase 1; MAP kinase-interacting serine/threonine-protein kinase 1; MAPK signal-integrating kinase 1; MGC112775; mnk1; similar to map kinase interacting kinase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	134,554,881 - 134,594,392 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	134,554,943 - 134,594,393 (+)	Ensembl				GRCr8
mRatBN7.2	5	129,318,128 - 129,357,641 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	129,318,170 - 129,357,639 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	131,935,265 - 131,974,307 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	133,690,135 - 133,729,177 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	133,712,289 - 133,751,335 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	134,691,852 - 134,730,887 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	134,691,881 - 134,730,893 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	136,100,236 - 136,141,344 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	127,849,685 - 127,888,824 (+)	NCBI		Celera
Cytogenetic Map	5	q35	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

substance-related disorder (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-anisomycin (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxynon-2-enal (ISO)

4-vinylcyclohexene dioxide (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

choline (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

D-glucitol (ISO)

diarsenic trioxide (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

flutamide (EXP)

folic acid (ISO)

hydrogen peroxide (ISO)

L-methionine (ISO)

lipopolysaccharide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methoxyacetic acid (EXP)

methyl methanesulfonate (ISO)

N(4)-hydroxycytidine (ISO)

nickel dichloride (ISO)

nickel subsulfide (ISO)

ozone (EXP)

paracetamol (EXP,ISO)

phorbol 13-acetate 12-myristate (ISO)

quercetin (ISO)

SB 203580 (ISO)

sorafenib (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triphenyl phosphate (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

extrinsic apoptotic signaling pathway in absence of ligand (ISO)

intracellular signal transduction (IBA,ISO)

peptidyl-serine phosphorylation (IMP)

protein phosphorylation (ISO)

regulation of translation (IEA)

regulation of translational initiation (IMP)

response to salt stress (ISO)

Cellular Component

cytoplasm (IBA)

nucleoplasm (ISO)

nucleus (IBA)

Molecular Function

ATP binding (IEA,ISO)

calcium-dependent protein serine/threonine kinase activity (IBA)

calcium/calmodulin-dependent protein kinase activity (IBA)

calmodulin binding (IBA)

kinase activity (IEA)

metal ion binding (IEA)

nucleotide binding (IEA)

protein binding (ISO)

protein kinase activity (IEA)

protein serine kinase activity (IEA)

protein serine/threonine kinase activity (IEA,IMP,ISO)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

cyclooxygenase mediated pathway of arachidonic acid metabolism (ISO)

insulin signaling pathway (IEA)

mitogen activated protein kinase signaling pathway (IEA)

p38 MAPK signaling pathway (ISO)

the extracellular signal-regulated Raf/Mek/Erk signaling pathway (IMP,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Alterations in mammalian target of rapamycin signaling pathways after traumatic brain injury.	Chen S, etal., J Cereb Blood Flow Metab. 2007 May;27(5):939-49. Epub 2006 Aug 30.
2.	MAPKAP kinases - MKs - two's company, three's a crowd.	Gaestel M Nat Rev Mol Cell Biol. 2006 Feb;7(2):120-30.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Molecules in focus: cytosolic phospholipase A2-alpha.	Niknami M, etal., Int J Biochem Cell Biol. 2009 May;41(5):994-7. doi: 10.1016/j.biocel.2008.07.017. Epub 2008 Aug 8.
5.	Ras transformation of RIE-1 cells activates cap-independent translation of ornithine decarboxylase: regulation by the Raf/MEK/ERK and phosphatidylinositol 3-kinase pathways.	Origanti S and Shantz LM, Cancer Res. 2007 May 15;67(10):4834-42.
6.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
7.	GOA pipeline	RGD automated data pipeline
8.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
10.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:9155017	PMID:9155018	PMID:15489334	PMID:17130135	PMID:17903173	PMID:25453757

Genomics

Comparative Map Data

Mknk1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	134,554,881 - 134,594,392 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	134,554,943 - 134,594,393 (+)	Ensembl				GRCr8
mRatBN7.2	5	129,318,128 - 129,357,641 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	129,318,170 - 129,357,639 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	131,935,265 - 131,974,307 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	133,690,135 - 133,729,177 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	133,712,289 - 133,751,335 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	134,691,852 - 134,730,887 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	134,691,881 - 134,730,893 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	136,100,236 - 136,141,344 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	127,849,685 - 127,888,824 (+)	NCBI		Celera
Cytogenetic Map	5	q35	NCBI

MKNK1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	46,557,407 - 46,604,268 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	46,557,407 - 46,616,843 (-)	Ensembl			hg38	GRCh38
GRCh37	1	47,023,079 - 47,069,940 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	46,795,677 - 46,842,473 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	1	45,310,474 - 45,357,318 (-)	NCBI		Celera
Cytogenetic Map	1	p33	NCBI
HuRef	1	45,138,599 - 45,185,470 (-)	NCBI		HuRef
CHM1_1	1	47,140,090 - 47,186,977 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	46,434,628 - 46,481,501 (-)	NCBI		T2T-CHM13v2.0

Mknk1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	115,695,140 - 115,736,453 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	115,696,395 - 115,736,447 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	115,837,943 - 115,879,256 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	115,839,198 - 115,879,250 (+)	Ensembl			mm10	GRCm38
MGSCv37	4	115,511,851 - 115,551,853 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	115,337,178 - 115,377,180 (+)	NCBI		MGSCv36	mm8
Celera	4	114,578,978 - 114,618,975 (+)	NCBI		Celera
Cytogenetic Map	4	D1	NCBI
cM Map	4	53.06	NCBI

Mknk1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	11,707,614 - 11,750,562 (+)	Ensembl
ChiLan1.0	NW_004955464	11,697,946 - 11,750,258 (+)	NCBI	ChiLan1.0	ChiLan1.0

MKNK1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	180,204,666 - 180,251,570 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	179,346,289 - 179,393,176 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	45,859,888 - 45,906,840 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	47,215,693 - 47,262,324 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	47,215,693 - 47,262,317 (-)	Ensembl			panPan2	panpan1.1

MKNK1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	13,857,495 - 13,898,709 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	13,857,553 - 13,898,723 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	13,978,161 - 14,019,402 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	14,008,202 - 14,049,444 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	14,008,192 - 14,049,444 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	13,809,430 - 13,850,723 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	13,878,036 - 13,919,318 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	13,947,345 - 13,988,638 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mknk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	61,743,543 - 61,786,599 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936474	27,568,325 - 27,611,315 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MKNK1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	164,887,748 - 164,933,521 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	164,887,707 - 164,933,526 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	152,376,955 - 152,423,383 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MKNK1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	86,202,953 - 86,250,574 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	86,204,502 - 86,250,712 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666033	30,741,656 - 30,788,020 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mknk1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624906	2,439,418 - 2,473,967 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624906	2,442,590 - 2,494,724 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mknk1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	39,521,584 - 39,559,632 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mknk1
185 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	74
Count of miRNA genes:	66
Interacting mature miRNAs:	67
Transcripts:	ENSRNOT00000067655
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331796	Thshl2	Thyroid stimulating hormone level QTL 2	2.3		blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	5	102105698	152749382	Rat
2303586	Gluco52	Glucose level QTL 52	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	100826632	145826632	Rat
10053720	Scort26	Serum corticosterone level QTL 26	2.06	0.0147	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	130249266	172190305	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
8552960	Pigfal15	Plasma insulin-like growth factor 1 level QTL 15			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	116702075	161702075	Rat
1354583	Despr3	Despair related QTL3	4.98	0.0002	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	5	132930505	172190305	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
1300122	Wbc1	White blood cell count QTL 1	2.75		leukocyte quantity (VT:0000217)	total white blood cell count (CMO:0000365)	5	130678987	145274255	Rat
7365049	Bp359	Blood pressure QTL 359			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	133308734	140009902	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	99905133	172190305	Rat
70156	Niddm30	Non-insulin dependent diabetes mellitus QTL 30	3.98		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	5	134369218	156289444	Rat
8552908	Pigfal4	Plasma insulin-like growth factor 1 level QTL 4	6.6		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	133789363	172190305	Rat
7411582	Foco3	Food consumption QTL 3	7.5	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	92583776	137583776	Rat
1331803	Rf32	Renal function QTL 32	2.798		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	134369199	172190305	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
7207486	Bss109	Bone structure and strength QTL 109			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	5	112142946	157142946	Rat
7207481	Bss106	Bone structure and strength QTL 106	7.9		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	112142946	157142946	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	110770739	155770739	Rat
1598861	Cm64	Cardiac mass QTL 64	2.9		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	133081618	172190305	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1549838	Bss4	Bone structure and strength QTL 4	9.2		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	5	112142946	157142946	Rat
1581505	Rf54	Renal function QTL 54			kidney physiology trait (VT:0002136)	kidney 20-HETE level (CMO:0001854)	5	133270647	172190305	Rat
7411564	Bw135	Body weight QTL 135		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	92583776	137583776	Rat
8694169	Bw148	Body weight QTL 148	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	133789363	172190305	Rat
8657050	Bw146	Body weight QTL 146	19.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	98972960	143972960	Rat
1581510	Cm54	Cardiac mass QTL 54	3.4	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	125969677	172190305	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
7411601	Foco12	Food consumption QTL 12	19.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	92583776	137583776	Rat
2303618	Vencon1	Ventilatory control QTL 1	3.8		respiration trait (VT:0001943)	oxygen consumption (CMO:0002169)	5	100826632	145826632	Rat
2317056	Wbc3	White blood cell count QTL 3	2.51	0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	5	111236572	156236572	Rat
7394710	Emca12	Estrogen-induced mammary cancer QTL 12			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	94034903	139034903	Rat
724525	Bp147	Blood pressure QTL 147	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	131708216	172190305	Rat
1598847	Cm62	Cardiac mass QTL 62	3.4		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	114131300	159131300	Rat
2293642	Bss37	Bone structure and strength QTL 37	4.64	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	125969677	156302135	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
7207488	Bss110	Bone structure and strength QTL 1	8.4		femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	5	112142946	157142946	Rat
8694441	Bw169	Body weight QTL 169	17.61	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	5	116702075	161702075	Rat
7207491	Bss112	Bone structure and strength QTL 112	7		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	5	112142946	157142946	Rat
8694389	Bw160	Body weight QTL 160	6.17	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	5	116702075	161702075	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	74335621	156302135	Rat
8694198	Abfw3	Abdominal fat weight QTL 3	16.13	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	5	116702075	161702075	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	70969494	136328156	Rat
1298089	Scl14	Serum cholesterol level QTL 14	5.8	0.0004	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	114131300	159131300	Rat
1598819	Bp292	Blood pressure QTL 292	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	133081618	172190305	Rat
6903316	Bw113	Body weight QTL 113	2	0.0103	body mass (VT:0001259)	body weight (CMO:0000012)	5	92881678	137881678	Rat
1358187	Emca1	Estrogen-induced mammary cancer QTL 1	4.4		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	5	104262817	153890625	Rat

Markers in Region

D5Mco7

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	5	134,556,948 - 134,557,274 (+)	Marker Load Pipeline
mRatBN7.2	5	129,320,195 - 129,320,521 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	134,693,892 - 134,694,217	NCBI	Rnor6.0
Rnor_5.0	5	138,478,340 - 138,478,665	UniSTS	Rnor5.0
RGSC_v3.4	5	136,102,214 - 136,102,540	RGD	RGSC3.4
RGSC_v3.4	5	136,102,215 - 136,102,540	UniSTS	RGSC3.4
Celera	5	127,851,664 - 127,851,975	UniSTS
RGSC_v3.1	5	136,107,440 - 136,107,766	RGD
Cytogenetic Map	5	q36	UniSTS

BI301014

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	129,339,283 - 129,339,435 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	134,712,918 - 134,713,069	NCBI	Rnor6.0
Celera	5	127,870,625 - 127,870,777	UniSTS
RH 3.4 Map	5	838.3	UniSTS
Cytogenetic Map	5	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001044267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001438127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238694	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110584	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC098754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000067655 ⟹ ENSRNOP00000061535

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	134,554,964 - 134,594,391 (+)	Ensembl
mRatBN7.2 Ensembl	5	129,318,211 - 129,357,632 (+)	Ensembl
Rnor_6.0 Ensembl	5	134,691,913 - 134,730,459 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091543 ⟹ ENSRNOP00000072679

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	134,554,964 - 134,594,393 (+)	Ensembl
mRatBN7.2 Ensembl	5	129,318,170 - 129,357,639 (+)	Ensembl
Rnor_6.0 Ensembl	5	134,691,881 - 134,730,893 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121912 ⟹ ENSRNOP00000112550

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	134,571,094 - 134,594,390 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000138277 ⟹ ENSRNOP00000102287

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	134,554,943 - 134,594,391 (+)	Ensembl

RefSeq Acc Id:

NM_001044267 ⟹ NP_001037732

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	134,554,970 - 134,593,969 (+)	NCBI
mRatBN7.2	5	129,318,217 - 129,357,218 (+)	NCBI
Rnor_6.0	5	134,691,913 - 134,730,464 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI
RGSC_v3.4	5	136,100,236 - 136,141,344 (+)	RGD
Celera	5	127,849,685 - 127,888,824 (+)	RGD

Sequence:

show sequence

TGCAGGTGGGGGTGCGCGCGGCCGTTCCCGCGGTGGTCAACTAAGAGATGGGCAGCAGTGAGCC
CCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACCCGGGCCACCGACTCT
CTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGGGAGAAGGAGCCTATG
CCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGTCAAAATCATCGAGAA
GCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTGTACCAGTGTCAAGGA
AACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGATTTTACTTGGTCTTTG
AGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCACTTCAATGAGCTAGA
AGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCATACTAAAGGCATTGCT
CACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGGTGTCTCCGGTGAAAA
TTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCACTCCCATAACCACACC
AGAGCTGACCACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTGGTGGAGGTCTTTAGG
GACGAGGCTACTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTGTGGTCCTCTACATCA
TGCTGAGTGGCTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGGCTGGGACCGGGGAGA
GGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCAAATACGAGTTTCCC
GACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAAGCTCCTGGTTCGAG
ATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTGCAAGGGCAAGCTCC
AGAAAGGGGACTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACCATGGACTTGACACTC
TTCGCAGCTGAGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAGAGAATGAACTGGCTG
AGGAACACGAGGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCCTCCATCCAAATCTCG
CCTGGCACGAAGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCTTGTTCCACACCCGCA
GGGCTCTGAACTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAACCTACGAGGTCAAAGT
GTGAAGCTAGCCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCATCCACAAAGGCTCCT
GGGTTCCCACCCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCTTTTTCCAAAGGGGTT
GTCTTTGAAAAGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCAGCAGGAACATCTCTC
TGCCCGGCTCCAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTGGTGGGGGCTGCTGGG
GCTGCAGCCTTCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAGACACGCCTCTTCTCC
CCTGCACTGTCACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCTCTGCCTGTCTTCTCC
CCGGCTGAGCAAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAACCAGATCAGTCTTCCA
GTCTGTAGCACGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATGTCTTCCTCATTTATC
ATCCTCTTCCGTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTTTAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006238694 ⟹ XP_006238756

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	134,569,724 - 134,594,392 (+)	NCBI
mRatBN7.2	5	129,332,967 - 129,357,641 (+)	NCBI
Rnor_6.0	5	134,706,555 - 134,730,887 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI

Sequence:

show sequence

TGTCTTTGTGTGGGAAGCCATAAAATATAATATTGAGTATGTGGCTCTGCCCAGGGTTATGCTG
CTTGCACGGGAGGCTCCACAGCCCTGCTGTGGTAAAGAGCACGTATAAACTGCCGCTAACAGGG
TTTTCTGTCTAGAGCTGTAAGTACGTCTGAGAGGCCCCTGTGAGTCGCAATGCTGCCAGCTCTC
CTGCTGTTCTCCACACTGCCTGCCTGTTGGCTGTTTGGTTTGTCCACAGGCTCCTAATTGGAGT
GTGGCCAGGGGAGGGTGAAGGAGCAGAAACCACATCTGTTCGCTCCACTCTGGGTTTGCAGCAC
TGGTGAGGAATAGTTGGGACAAGGGCTGACACTAGACTGCATGCCACGGGGAAGACAGTCCAGT
CATATCCCAACCCCGTCCTGTCCCCTCCCCCAGTCCTTCAAAGACAAATGGCCTTGCACTTTGT
TTCGGAAGAATTTCTCCCAGTGCCCCGTAATGCATCTGGAGGGCATTTCTCCTTGTGATTTACC
TCACGGGTGTGGGTACCTCAGTAGCAGGATTTAATCCTTTGAGAGTTGTAGGGCTGTGTCATCC
CCGGGTAGAACTTGAGCTTGAAGCTGTTGGTGGGAGCGATATTTTCAGATGCTCTGTGGATTCT
TTGTATCCGTGTATTTTTTTTTCTGCTCTGTTCTGGGGTGTAATTGAAAACCTGCTGTGATCAG
ATCACTACCATGGACGGAGGGATGCATCTAAGTGGGGCTGTCAGACGCTTGGCTGCTTAGCTGT
GCTTTCTGGATTGTGGTGTTGAAAGTGCCATTCTGCATGCTTCCTGCTAACAACCGCCAAGAGC
CTGCCTCTGTGGGCAGCATGCATGTGGGCAGTGGCACTAAGCAACCTTCTGCCGGACCCTTGGA
GAAGGGAGTGGGCCTTCTCCTCCGTGAGCGAAGAACCTGATTCCATTTTAAAATTTCTCAGGAC
AAACCAAGCCTCAGAGCCTATGTTTATTGAAGTTTGGGGTGGAAGGCTCTCACATCCTCCACCC
GTCAGAAGGATATAGAGGCTTAATCACCCTGGTGGGGATTTAGACCCAGAGACTTCAGAGAAAT
CTTATTATTTCTAACTGCAGGCAAAGAGTATTAAGGCTCCACTCTGGATCCAGGGCATGACATG
TTCTCTAAGTAATTTATCTTTACCAGGGGAAGGCCCCTACTAGAGTGGCCTAGAAACAAACCTG
AGATGGGCTCTCATTGTTCCCCCTCTTTTCTTCCCCATCTCAGCCTCCTGCTGCTTCCTTCTGT
CCTGACCCTTCCTGCCCACAATGTCCTGTGTCTGTGTCTGCCAGCATGGGCGTCGGGTGCCTGC
CAGGGAGAGATAATGATATCTTTACAGTCCGTGGCCTCATCCAGCCTCGTAAACTTGTCAGTGG
CTGGCCTCCCTGCACCCCTTCAGAGAAGGACCAGGGAAGGGAGAAGATGGAGTGAGGGGATTGG
GGCCTTCCACAGCCCCCAGTGCAGGTCATGGAAATATTGCTCAGCTTTCTGATTTCCAGGTTCT
ATTCCTGCTCCCTCCTTACCCAGTTCGCAGCCCCAGGGACCGTCTTTCTGATGATCACAGAGAT
GGGCAGCAGTGAGCCCCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACC
CGGGCCACCGACTCTCTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGG
GAGAAGGAGCCTATGCCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGT
CAAAATCATCGAGAAGCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTG
TACCAGTGTCAAGGAAACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGAT
TTTACTTGGTCTTTGAGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCA
CTTCAATGAGCTAGAAGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCAT
ACTAAAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGG
TGTCTCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCAC
TCCCATAACCACACCAGAGCTGACCACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTG
GTGGAGGTCTTTAGGGACGAGGCTACTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTG
TGGTCCTCTACATCATGCTGAGTGGCTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGG
CTGGGACCGGGGAGAGGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGC
AAATACGAGTTTCCCGACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTA
AGCTCCTGGTTCGAGATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGT
GCAAGGGCAAGCTCCAGAAAGGGGACTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACC
ATGGACTTGACACTCTTCGCAGCTGAGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAG
AGAATGAACTGGCTGAGGAACACGAGGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCC
TCCATCCAAATCTCGCCTGGCACGAAGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCT
TGTTCCACACCCGCAGGGCTCTGAACTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAAC
CTACGAGGTCAAAGTGTGAAGCTAGCCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCA
TCCACAAAGGCTCCTGGGTTCCCACCCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCT
TTTTCCAAAGGGGTTGTCTTTGAAAAGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCA
GCAGGAACATCTCTCTGCCCGGCTCCAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTG
GTGGGGGCTGCTGGGGCTGCAGCCTTCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAG
ACACGCCTCTTCTCCCCTGCACTGTCACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCT
CTGCCTGTCTTCTCCCCGGCTGAGCAAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAAC
CAGATCAGTCTTCCAGTCTGTAGCACGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATG
TCTTCCTCATTTATCATCCTCTTCCGTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTT
TAAAAATGCGTTTGCTTTATTTTTAACCATGTTCTTCCAGCAACCATAGAACTTCAAACTCGCA
CTGTGAGCCCATGGACTTCCCCAGGCAGATGCCCATGCACTTGGGTTTTAATCCTCCTCCCCAC
TGTCTCCAACTTTAAAGACCGGTGCCTTCGCATCTTTGTCTGCCACTGCCTTCTCCCAGGTCTT
TTGTGGAGAGAGGCACAAACCCAGGGCAGTCAGACTGCTGTGTCCGAGATGAAGCCCTGCTGCC
CTGCTCTGAGAAATGCTGTGCCCACTGCCCCCAGACATGAAGGCACAGCCACTGTCAGATAAGC
TGTGGGGTCACATAAAACAGATTTGCACATGTGACATACGTTAGTCAACCACGACCACCCAAAT
TCTCTCATAACTTGTGCTTATTTTAATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_006238696 ⟹ XP_006238758

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	134,554,906 - 134,594,392 (+)	NCBI
mRatBN7.2	5	129,318,152 - 129,357,641 (+)	NCBI
Rnor_6.0	5	134,691,857 - 134,730,887 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI

Sequence:

show sequence

GCCAGGGCCCTCCCCCTGAGTTTAGCTCCACCTCTTCCGCGTTCTCGACTGAGACCTGCAGGTG
GGGGTGCGCGCGGCCGTTCCCGCGGTGGTCAACTAAGATGGACTCTCTCTGGGATACCCAGGCT
GGCATCAGTTGCTAAGCACAAATTTCCATGCTGGAGGAGATGAAGCAGAAGCAGGCGGCAGACT
GAAGGGCACTGACTGGACAGAGGCCAGTGATAACTCCCTGCGGCTGGAAGACACCAACCTTGGG
ATTCCTCTGAGATTTCACGTTCACAAGTATCACTGCTGAGTTGAAGAACCTTGCGGTTTCAAAA
ACAACTCTCCCTCAACAAGTTCTGTTTGCAAGGAAAACCTTACCCATTTGTCCCTTCTGGCGCA
CCTCCTTCCATTGAGATCCATGCAGAATAGACCAGAGATGGGCAGCAGTGAGCCCCTTCCCATC
GTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACCCGGGCCACCGACTCTCTGCCAGGGA
AGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGGGAGAAGGAGCCTATGCCAAAGTCCA
GGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGTCAAAATCATCGAGAAGCAAGCAGGA
CACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTGTACCAGTGTCAAGGAAACAGGAACA
TTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGATTTTACTTGGTCTTTGAGAAATTGCA
AGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCACTTCAATGAGCTAGAAGCCAGCAGA
GTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCATACTAAAGGCATTGCTCACCGTGATC
TGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGGTGTCTCCGGTGAAAATTTGTGACTT
TGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCACTCCCATAACCACACCAGAGCTGACC
ACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTGGTGGAGGTCTTTAGGGACGAGGCTA
CTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTGTGGTCCTCTACATCATGCTGAGTGG
CTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGGCTGGGACCGGGGAGAGGTATGCAGG
ATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCAAATACGAGTTTCCCGACAAAGACT
GGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAAGCTCCTGGTTCGAGATGCGAAGCA
GAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTGCAAGGGCAAGCTCCAGAAAGGGGA
CTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACCATGGACTTGACACTCTTCGCAGCTG
AGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAGAGAATGAACTGGCTGAGGAACACGA
GGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCCTCCATCCAAATCTCGCCTGGCACGA
AGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCTTGTTCCACACCCGCAGGGCTCTGAA
CTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAACCTACGAGGTCAAAGTGTGAAGCTAG
CCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCATCCACAAAGGCTCCTGGGTTCCCAC
CCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCTTTTTCCAAAGGGGTTGTCTTTGAAA
AGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCAGCAGGAACATCTCTCTGCCCGGCTC
CAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTGGTGGGGGCTGCTGGGGCTGCAGCCT
TCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAGACACGCCTCTTCTCCCCTGCACTGT
CACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCTCTGCCTGTCTTCTCCCCGGCTGAGC
AAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAACCAGATCAGTCTTCCAGTCTGTAGCA
CGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATGTCTTCCTCATTTATCATCCTCTTCC
GTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTTTAAAAATGCGTTTGCTTTATTTTTA
ACCATGTTCTTCCAGCAACCATAGAACTTCAAACTCGCACTGTGAGCCCATGGACTTCCCCAGG
CAGATGCCCATGCACTTGGGTTTTAATCCTCCTCCCCACTGTCTCCAACTTTAAAGACCGGTGC
CTTCGCATCTTTGTCTGCCACTGCCTTCTCCCAGGTCTTTTGTGGAGAGAGGCACAAACCCAGG
GCAGTCAGACTGCTGTGTCCGAGATGAAGCCCTGCTGCCCTGCTCTGAGAAATGCTGTGCCCAC
TGCCCCCAGACATGAAGGCACAGCCACTGTCAGATAAGCTGTGGGGTCACATAAAACAGATTTG
CACATGTGACATACGTTAGTCAACCACGACCACCCAAATTCTCTCATAACTTGTGCTTATTTTA
ATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_006238697 ⟹ XP_006238759

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	134,554,881 - 134,594,392 (+)	NCBI
mRatBN7.2	5	129,318,128 - 129,357,641 (+)	NCBI
Rnor_6.0	5	134,691,852 - 134,730,887 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI

Sequence:

show sequence

CTTCTGCCAGGGCCCTCCCCCTGAGTTTAGCTCCACCTCTTCCGCGTTCTCGACTGAGACCTGC
AGGTGGGGGTGCGCGCGGCCGTTCCCGCGGTGGTCAACTAAGATTTCCATGCTGGAGGAGATGA
AGCAGAAGCAGGCGGCAGACTGAAGGGCACTGACTGGACAGAGGCCAGTGATAACTCCCTGCGG
CTGGAAGACACCAACCTTGGGATTCCTCTGAGATTTCACGTTCACAAGTATCACTGCTGAGTTG
AAGAACCTTGCGGTTTCAAAAACAACTCTCCCTCAACAAGTTCTGTTTGCAAGGAAAACCTTAC
CCATTTGTCCCTTCTGGCGCACCTCCTTCCATTGAGATCCATGCAGAATAGACCAGAGATGGGC
AGCAGTGAGCCCCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACCCGGG
CCACCGACTCTCTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGGGAGA
AGGAGCCTATGCCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGTCAAA
ATCATCGAGAAGCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTGTACC
AGTGTCAAGGAAACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGATTTTA
CTTGGTCTTTGAGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCACTTC
AATGAGCTAGAAGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCATACTA
AAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGGTGTC
TCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCACTCCC
ATAACCACACCAGAGCTGACCACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTGGTGG
AGGTCTTTAGGGACGAGGCTACTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTGTGGT
CCTCTACATCATGCTGAGTGGCTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGGCTGG
GACCGGGGAGAGGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCAAAT
ACGAGTTTCCCGACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAAGCT
CCTGGTTCGAGATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTGCAA
GGGCAAGCTCCAGAAAGGGGACTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACCATGG
ACTTGACACTCTTCGCAGCTGAGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAGAGAA
TGAACTGGCTGAGGAACACGAGGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCCTCCA
TCCAAATCTCGCCTGGCACGAAGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCTTGTT
CCACACCCGCAGGGCTCTGAACTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAACCTAC
GAGGTCAAAGTGTGAAGCTAGCCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCATCCA
CAAAGGCTCCTGGGTTCCCACCCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCTTTTT
CCAAAGGGGTTGTCTTTGAAAAGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCAGCAG
GAACATCTCTCTGCCCGGCTCCAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTGGTGG
GGGCTGCTGGGGCTGCAGCCTTCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAGACAC
GCCTCTTCTCCCCTGCACTGTCACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCTCTGC
CTGTCTTCTCCCCGGCTGAGCAAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAACCAGA
TCAGTCTTCCAGTCTGTAGCACGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATGTCTT
CCTCATTTATCATCCTCTTCCGTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTTTAAA
AATGCGTTTGCTTTATTTTTAACCATGTTCTTCCAGCAACCATAGAACTTCAAACTCGCACTGT
GAGCCCATGGACTTCCCCAGGCAGATGCCCATGCACTTGGGTTTTAATCCTCCTCCCCACTGTC
TCCAACTTTAAAGACCGGTGCCTTCGCATCTTTGTCTGCCACTGCCTTCTCCCAGGTCTTTTGT
GGAGAGAGGCACAAACCCAGGGCAGTCAGACTGCTGTGTCCGAGATGAAGCCCTGCTGCCCTGC
TCTGAGAAATGCTGTGCCCACTGCCCCCAGACATGAAGGCACAGCCACTGTCAGATAAGCTGTG
GGGTCACATAAAACAGATTTGCACATGTGACATACGTTAGTCAACCACGACCACCCAAATTCTC
TCATAACTTGTGCTTATTTTAATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_006238698 ⟹ XP_006238760

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	134,554,906 - 134,594,392 (+)	NCBI
mRatBN7.2	5	129,318,152 - 129,357,641 (+)	NCBI
Rnor_6.0	5	134,691,857 - 134,730,887 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI

Sequence:

show sequence

GCCAGGGCCCTCCCCCTGAGTTTAGCTCCACCTCTTCCGCGTTCTCGACTGAGACCTGCAGGTG
GGGGTGCGCGCGGCCGTTCCCGCGGTGGTCAACTAAGATGGACTCTCTCTGGGATACCCAGGCT
GGCATCAGTTGCTAAGCACAAATTTCCATGCTGGAGGAGATGAAGCAGAAGCAGGCGGCAGACT
GAAGGGCACTGACTGGACAGAGGCCAGTGATAACTCCCTGCGGCTGGAAGACACCAACCTTGGG
ATTCCTCTGAGATTTCACGTTCACAAGTATCACTGCTGAGTTGAAGAACCTTGCGGAGATGGGC
AGCAGTGAGCCCCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACCCGGG
CCACCGACTCTCTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGGGAGA
AGGAGCCTATGCCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGTCAAA
ATCATCGAGAAGCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTGTACC
AGTGTCAAGGAAACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGATTTTA
CTTGGTCTTTGAGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCACTTC
AATGAGCTAGAAGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCATACTA
AAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGGTGTC
TCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCACTCCC
ATAACCACACCAGAGCTGACCACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTGGTGG
AGGTCTTTAGGGACGAGGCTACTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTGTGGT
CCTCTACATCATGCTGAGTGGCTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGGCTGG
GACCGGGGAGAGGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCAAAT
ACGAGTTTCCCGACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAAGCT
CCTGGTTCGAGATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTGCAA
GGGCAAGCTCCAGAAAGGGGACTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACCATGG
ACTTGACACTCTTCGCAGCTGAGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAGAGAA
TGAACTGGCTGAGGAACACGAGGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCCTCCA
TCCAAATCTCGCCTGGCACGAAGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCTTGTT
CCACACCCGCAGGGCTCTGAACTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAACCTAC
GAGGTCAAAGTGTGAAGCTAGCCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCATCCA
CAAAGGCTCCTGGGTTCCCACCCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCTTTTT
CCAAAGGGGTTGTCTTTGAAAAGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCAGCAG
GAACATCTCTCTGCCCGGCTCCAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTGGTGG
GGGCTGCTGGGGCTGCAGCCTTCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAGACAC
GCCTCTTCTCCCCTGCACTGTCACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCTCTGC
CTGTCTTCTCCCCGGCTGAGCAAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAACCAGA
TCAGTCTTCCAGTCTGTAGCACGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATGTCTT
CCTCATTTATCATCCTCTTCCGTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTTTAAA
AATGCGTTTGCTTTATTTTTAACCATGTTCTTCCAGCAACCATAGAACTTCAAACTCGCACTGT
GAGCCCATGGACTTCCCCAGGCAGATGCCCATGCACTTGGGTTTTAATCCTCCTCCCCACTGTC
TCCAACTTTAAAGACCGGTGCCTTCGCATCTTTGTCTGCCACTGCCTTCTCCCAGGTCTTTTGT
GGAGAGAGGCACAAACCCAGGGCAGTCAGACTGCTGTGTCCGAGATGAAGCCCTGCTGCCCTGC
TCTGAGAAATGCTGTGCCCACTGCCCCCAGACATGAAGGCACAGCCACTGTCAGATAAGCTGTG
GGGTCACATAAAACAGATTTGCACATGTGACATACGTTAGTCAACCACGACCACCCAAATTCTC
TCATAACTTGTGCTTATTTTAATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_039110584 ⟹ XP_038966512

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	134,569,534 - 134,594,392 (+)	NCBI
mRatBN7.2	5	129,332,781 - 129,357,641 (+)	NCBI

RefSeq Acc Id:

XM_039110585 ⟹ XP_038966513

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	134,569,534 - 134,594,392 (+)	NCBI
mRatBN7.2	5	129,332,781 - 129,356,543 (+)	NCBI

RefSeq Acc Id:

XM_039110586 ⟹ XP_038966514

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	134,569,534 - 134,594,392 (+)	NCBI
mRatBN7.2	5	129,332,781 - 129,357,641 (+)	NCBI

RefSeq Acc Id:

XM_039110587 ⟹ XP_038966515

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	134,554,906 - 134,594,392 (+)	NCBI
mRatBN7.2	5	129,318,152 - 129,357,641 (+)	NCBI

RefSeq Acc Id:

XM_063288236 ⟹ XP_063144306

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	134,554,905 - 134,594,392 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001037732	(Get FASTA)	NCBI Sequence Viewer
	NP_001425056	(Get FASTA)	NCBI Sequence Viewer
	XP_006238756	(Get FASTA)	NCBI Sequence Viewer
	XP_006238758	(Get FASTA)	NCBI Sequence Viewer
	XP_006238759	(Get FASTA)	NCBI Sequence Viewer
	XP_006238760	(Get FASTA)	NCBI Sequence Viewer
	XP_038966512	(Get FASTA)	NCBI Sequence Viewer
	XP_038966513	(Get FASTA)	NCBI Sequence Viewer
	XP_038966514	(Get FASTA)	NCBI Sequence Viewer
	XP_038966515	(Get FASTA)	NCBI Sequence Viewer
	XP_063144306	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH98754	(Get FASTA)	NCBI Sequence Viewer
	EDL90300	(Get FASTA)	NCBI Sequence Viewer
	EDL90301	(Get FASTA)	NCBI Sequence Viewer
	EDL90302	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000061535
	ENSRNOP00000072679
	ENSRNOP00000102287
	ENSRNOP00000112550
GenBank Protein	Q4G050	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001037732 ⟸ NM_001044267

- UniProtKB:

Q4G050 (UniProtKB/Swiss-Prot), A6JZ51 (UniProtKB/TrEMBL), A0A8L2QVH8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGSSEPLPIVDSDKRRKKKRKTRATDSLPGKFEDVYQLTSELLGEGAYAKVQGAVSLQSGKEYA
VKIIEKQAGHSRSRVFREVETLYQCQGNRNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKRK
HFNELEASRVVRDVATALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNNSC
TPITTPELTTPCGSAEYMAPEVVEVFRDEATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADC
GWDRGEVCRMCQNKLFESIQEGKYEFPDKDWAHISTEAKDLISKLLVRDAKQRLSAAQVLQHPW
VQGQAPERGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEHEALAEGLCSMKLS
PPSKSRLARRRALAHAGREANSCSTPAGL

hide sequence

RefSeq Acc Id:	XP_006238759 ⟸ XM_006238697
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K3K7 (UniProtKB/TrEMBL), A0A8L2QVH8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQNRPEMGSSEPLPIVDSDKRRKKKRKTRATDSLPGKFEDVYQLTSELLGEGAYAKVQGAVSLQ SGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNRNILELIEFFEDDTRFYLVFEKLQGGSILA HIQKRKHFNELEASRVVRDVATALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGV KLNNSCTPITTPELTTPCGSAEYMAPEVVEVFRDEATFYDKRCDLWSLGVVLYIMLSGYPPFVG HCGADCGWDRGEVCRMCQNKLFESIQEGKYEFPDKDWAHISTEAKDLISKLLVRDAKQRLSAAQ VLQHPWVQGQAPERGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEHEALAEGL CSMKLSPPSKSRLARRRALAHAGREANSCSTPAGL hide sequence

RefSeq Acc Id:	XP_006238758 ⟸ XM_006238696
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K3K7 (UniProtKB/TrEMBL), A0A8L2QVH8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQNRPEMGSSEPLPIVDSDKRRKKKRKTRATDSLPGKFEDVYQLTSELLGEGAYAKVQGAVSLQ SGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNRNILELIEFFEDDTRFYLVFEKLQGGSILA HIQKRKHFNELEASRVVRDVATALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGV KLNNSCTPITTPELTTPCGSAEYMAPEVVEVFRDEATFYDKRCDLWSLGVVLYIMLSGYPPFVG HCGADCGWDRGEVCRMCQNKLFESIQEGKYEFPDKDWAHISTEAKDLISKLLVRDAKQRLSAAQ VLQHPWVQGQAPERGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEHEALAEGL CSMKLSPPSKSRLARRRALAHAGREANSCSTPAGL hide sequence

RefSeq Acc Id:

XP_006238760 ⟸ XM_006238698

- Peptide Label:

isoform X3

- Sequence:

show sequence

MGSSEPLPIVDSDKRRKKKRKTRATDSLPGKFEDVYQLTSELLGEGAYAKVQGAVSLQSGKEYA
VKIIEKQAGHSRSRVFREVETLYQCQGNRNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKRK
HFNELEASRVVRDVATALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNNSC
TPITTPELTTPCGSAEYMAPEVVEVFRDEATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADC
GWDRGEVCRMCQNKLFESIQEGKYEFPDKDWAHISTEAKDLISKLLVRDAKQRLSAAQVLQHPW
VQGQAPERGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEHEALAEGLCSMKLS
PPSKSRLARRRALAHAGREANSCSTPAGL

hide sequence

RefSeq Acc Id:	XP_006238756 ⟸ XM_006238694
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QVH8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEILLSFLISRFYSCSLLTQFAAPGTVFLMITEMGSSEPLPIVDSDKRRKKKRKTRATDSLPGK FEDVYQLTSELLGEGAYAKVQGAVSLQSGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNRNI LELIEFFEDDTRFYLVFEKLQGGSILAHIQKRKHFNELEASRVVRDVATALDFLHTKGIAHRDL KPENILCESPEKVSPVKICDFDLGSGVKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFRDEAT FYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRMCQNKLFESIQEGKYEFPDKDW AHISTEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPERGLPTPQVLQRNSSTMDLTLFAAE AIALNRQLSQHEENELAEEHEALAEGLCSMKLSPPSKSRLARRRALAHAGREANSCSTPAGL hide sequence

Ensembl Acc Id:

ENSRNOP00000061535 ⟸ ENSRNOT00000067655

Ensembl Acc Id:

ENSRNOP00000072679 ⟸ ENSRNOT00000091543

RefSeq Acc Id:	XP_038966515 ⟸ XM_039110587
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038966514 ⟸ XM_039110586
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038966512 ⟸ XM_039110584
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038966513 ⟸ XM_039110585
- Peptide Label:	isoform X5
- UniProtKB:	A0A8L2QVH8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144306 ⟸ XM_063288236
- Peptide Label:	isoform X8

Ensembl Acc Id:

ENSRNOP00000102287 ⟸ ENSRNOT00000138277

Ensembl Acc Id:

ENSRNOP00000112550 ⟸ ENSRNOT00000121912

Protein Domains

Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q4G050-F1-model_v2	AlphaFold	Q4G050	1-413	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693932

Promoter ID:

EPDNEW_R4449

Type:

multiple initiation site

Name:

Mknk1_1

Description:

MAP kinase-interacting serine/threonine kinase 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,691,897 - 134,691,957	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1559603	AgrOrtholog
BioCyc Gene	G2FUF-40273	BioCyc
Ensembl Genes	ENSRNOG00000010381	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000067655	ENTREZGENE
	ENSRNOT00000091543	ENTREZGENE
	ENSRNOT00000121912	ENTREZGENE
	ENSRNOT00000138277	ENTREZGENE
Gene3D-CATH	Phosphorylase Kinase, domain 1	UniProtKB/Swiss-Prot
	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7370127	IMAGE-MGC_LOAD
InterPro	CDPK_Ser/Thr_kinases	UniProtKB/Swiss-Prot
	Kinase-like_dom_sf	UniProtKB/Swiss-Prot
	Prot_kinase_dom	UniProtKB/Swiss-Prot
	Protein_kinase_ATP_BS	UniProtKB/Swiss-Prot
	Ser/Thr_kinase_AS	UniProtKB/Swiss-Prot
KEGG Report	rno:500526	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:112775	IMAGE-MGC_LOAD
NCBI Gene	500526	ENTREZGENE
PANTHER	SERINE/THREONINE-PROTEIN KINASE	UniProtKB/Swiss-Prot
Pfam	Pkinase	UniProtKB/Swiss-Prot
PhenoGen	Mknk1	PhenoGen
PROSITE	PROTEIN_KINASE_ATP	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_ST	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000010381	RatGTEx
SMART	S_TKc	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF56112	UniProtKB/Swiss-Prot
UniProt	A0A0G2K3K7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QVH8	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LDD9_RAT	UniProtKB/TrEMBL
	A0ABK0MAZ0_RAT	UniProtKB/TrEMBL
	A6JZ51	ENTREZGENE, UniProtKB/TrEMBL
	MKNK1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-08-08	Mknk1	MAPK interacting serine/threonine kinase 1	Mknk1	MAP kinase-interacting serine/threonine kinase 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-06	Mknk1	MAP kinase-interacting serine/threonine kinase 1	MGC112775	similar to map kinase interacting kinase	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-02-09	MGC112775	similar to map kinase interacting kinase			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)