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Gene: Lzts2 (leucine zipper tumor suppressor 2) Rattus norvegicus

Analyze

Symbol:

Lzts2

Name:

leucine zipper tumor suppressor 2

RGD ID:

1359249

Description:

Involved in negative regulation of fibroblast proliferation and positive regulation of apoptotic process. Located in centrosome; midbody; and mitotic spindle pole. Orthologous to human LZTS2 (leucine zipper tumor suppressor 2); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Lapser1; leucine zipper putative tumor suppressor 2; leucine zipper, putative tumor suppressor 2; LOC365468; similar to Putative tumor suppressor LAPSER1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	LZTS2 (leucine zipper tumor suppressor 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Lzts2 (leucine zipper, putative tumor suppressor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Lzts2 (leucine zipper tumor suppressor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LZTS2 (leucine zipper tumor suppressor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	LZTS2 (leucine zipper tumor suppressor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Lzts2 (leucine zipper tumor suppressor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LZTS2 (leucine zipper tumor suppressor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LZTS2 (leucine zipper tumor suppressor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Lzts2 (leucine zipper tumor suppressor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	LZTS2 (leucine zipper tumor suppressor 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Lzts2 (leucine zipper, putative tumor suppressor 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	lzts2b (leucine zipper, putative tumor suppressor 2b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	lzts2a (leucine zipper, putative tumor suppressor 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG15365	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	F35B3.7	Alliance	DIOPT (Ensembl Compara\|OrthoFinder)
Xenopus tropicalis (tropical clawed frog):	lzts2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	253,824,073 - 253,837,614 (+)	NCBI		GRCr8
mRatBN7.2	1	243,876,665 - 243,888,489 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	243,880,022 - 243,888,423 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	252,030,600 - 252,036,133 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	258,728,485 - 258,734,007 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	251,380,645 - 251,386,160 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	264,765,256 - 264,776,553 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	264,768,105 - 264,776,616 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	272,206,770 - 272,218,957 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	250,087,884 - 250,093,397 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	250,345,517 - 250,353,957 (+)	NCBI
Celera	1	239,694,071 - 239,699,584 (+)	NCBI		Celera
Cytogenetic Map	1	q54	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

urinary system disease (ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (EXP,ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

ciguatoxin CTX1B (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

fenthion (ISO)

fipronil (EXP)

folic acid (ISO)

FR900359 (ISO)

furan (EXP)

indometacin (ISO)

lead(0) (ISO)

malathion (ISO)

mercury atom (ISO)

mercury(0) (ISO)

methamphetamine (ISO)

methidathion (ISO)

nitrofen (EXP)

oxazepam (ISO)

paracetamol (EXP)

pentachlorophenol (ISO)

perfluorohexanesulfonic acid (ISO)

sodium arsenite (ISO)

temozolomide (ISO)

titanium dioxide (ISO)

trimellitic anhydride (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

fibroblast proliferation (IEA,ISO)

kidney development (ISO)

microtubule severing (IEA)

mitotic cytokinesis (IEA)

negative regulation of canonical Wnt signaling pathway (IBA,IEA,ISO)

negative regulation of fibroblast proliferation (IDA,IEA,ISO)

negative regulation of protein localization to nucleus (IEA,ISO)

negative regulation of Wnt signaling pathway (ISO)

nuclear export (IEA)

positive regulation of apoptotic process (IDA)

primary ureteric bud growth (IEA,ISO)

spindle midzone assembly (IEA)

ureter morphogenesis (IEA,ISO)

Wnt signaling pathway (IEA,ISO)

Cellular Component

centrosome (IDA,IEA)

cytoplasm (ISO)

cytosol (IEA,ISO)

microtubule (IEA)

midbody (IDA,IEA)

mitotic spindle pole (IDA)

plasma membrane (IEA,ISO)

vesicle (IEA,ISO)

Molecular Function

protein binding (IPI,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
6.	LAPSER1 is a putative cytokinetic tumor suppressor that shows the same centrosome and midbody subcellular localization pattern as p80 katanin.	Sudo H and Maru Y, FASEB J. 2007 Jul;21(9):2086-100. Epub 2007 Mar 9.

Additional References at PubMed

PMID:19703901	PMID:21949185	PMID:23275340	PMID:25468996

Genomics

Comparative Map Data

Lzts2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	253,824,073 - 253,837,614 (+)	NCBI		GRCr8
mRatBN7.2	1	243,876,665 - 243,888,489 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	243,880,022 - 243,888,423 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	252,030,600 - 252,036,133 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	258,728,485 - 258,734,007 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	251,380,645 - 251,386,160 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	264,765,256 - 264,776,553 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	264,768,105 - 264,776,616 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	272,206,770 - 272,218,957 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	250,087,884 - 250,093,397 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	250,345,517 - 250,353,957 (+)	NCBI
Celera	1	239,694,071 - 239,699,584 (+)	NCBI		Celera
Cytogenetic Map	1	q54	NCBI

LZTS2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	100,996,588 - 101,007,833 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	100,996,618 - 101,007,836 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	102,756,345 - 102,767,590 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	102,746,955 - 102,757,580 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	10	96,494,688 - 96,505,313 (+)	NCBI		Celera
Cytogenetic Map	10	q24.31	NCBI
HuRef	10	96,386,341 - 96,397,072 (+)	NCBI		HuRef
CHM1_1	10	103,041,068 - 103,051,797 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	101,879,963 - 101,891,208 (+)	NCBI		T2T-CHM13v2.0

Lzts2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	45,003,615 - 45,015,554 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	45,002,853 - 45,015,550 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	45,015,176 - 45,027,115 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	45,014,414 - 45,027,111 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	45,089,666 - 45,101,594 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	45,074,701 - 45,080,400 (+)	NCBI		MGSCv36	mm8
Celera	19	45,785,852 - 45,797,580 (+)	NCBI		Celera
Cytogenetic Map	19	C3	NCBI
cM Map	19	38.2	NCBI

Lzts2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955485	9,181,014 - 9,191,651 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955485	9,182,984 - 9,187,144 (-)	NCBI	ChiLan1.0	ChiLan1.0

LZTS2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	112,882,086 - 112,892,902 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	112,887,421 - 112,898,225 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	97,598,337 - 97,609,124 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	101,074,043 - 101,084,732 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	101,076,884 - 101,084,724 (+)	Ensembl	panpan1.1		panPan2

LZTS2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	13,683,029 - 13,693,194 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	13,684,034 - 13,692,521 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	13,852,514 - 13,862,632 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	14,151,115 - 14,161,233 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	14,151,165 - 14,161,233 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	13,696,861 - 13,706,980 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	13,738,152 - 13,748,271 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	13,870,122 - 13,880,245 (+)	NCBI		UU_Cfam_GSD_1.0

Lzts2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	33,075,555 - 33,085,589 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936600	4,678,788 - 4,686,575 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936600	4,678,788 - 4,688,825 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LZTS2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	112,078,517 - 112,088,443 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	112,078,211 - 112,088,484 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	121,737,068 - 121,739,521 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LZTS2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	94,015,432 - 94,026,191 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	94,018,257 - 94,027,268 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	55,067,140 - 55,077,909 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lzts2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624831	604,154 - 607,824 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624831	599,457 - 608,425 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Lzts2
32 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	337
Count of miRNA genes:	205
Interacting mature miRNAs:	234
Transcripts:	ENSRNOT00000048843
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	150700247	252085048	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	151162512	256448636	Rat
631690	Scl5	Serum cholesterol level QTL 5	2.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	236125214	260522016	Rat
1354652	Kidm20	Kidney mass QTL 20	4.3		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	177227632	256448636	Rat
2293674	Bss39	Bone structure and strength QTL 39	7.1	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	1	201554356	246554356	Rat
2302378	Insul11	Insulin level QTL 11	3.25		blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	1	144267353	251128347	Rat
61327	Eae7	Experimental allergic encephalomyelitis QTL 7	5.6		body mass (VT:0001259)	change in body weight (CMO:0002045)	1	216255568	260522016	Rat
1600392	Bw123	Body weight QTL 123		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	1	223201027	260522016	Rat
1578763	Kidm29	Kidney mass QTL 29	3.3	0.0001	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	1	179567751	260522016	Rat
1600395	Niddm69	Non-insulin dependent diabetes mellitus QTL 69	4.14	0.0002	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	195804352	257091168	Rat
1354624	Cm35	Cardiac mass QTL35	5.7		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	177227632	256448636	Rat
1600396	Niddm68	Non-insulin dependent diabetes mellitus QTL 68	4.97	0.0003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	195804352	257091168	Rat
631837	Niddm35	Non-insulin dependent diabetes mellitus QTL 35		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	1	238699859	259647894	Rat
1600397	Edcs4	Endometrial carcinoma susceptibility QTL 4	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	1	206081677	251081677	Rat
631836	Stl31	Serum triglyceride level QTL 31	4.64	5e-06	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	1	237147813	260522016	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	153136852	260522016	Rat
1600388	Niddm67	Non-insulin dependent diabetes mellitus QTL 67	5.84	0.000004	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	195804352	257091168	Rat
2293694	Bss38	Bone structure and strength QTL 38	7.05	0.0001	femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	1	201554356	246554356	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	150700247	252085048	Rat
1300108	Rf8	Renal function QTL 8	3.75		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	1	228581588	259647894	Rat
8655655	Arrd2	Age-related retinal degeneration QTL 2	7.79		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	183970203	243914901	Rat
734767	Niddm57	Non-insulin dependent diabetes mellitus QTL 57			body mass (VT:0001259)	body weight (CMO:0000012)	1	224054293	260122809	Rat
1358898	Bp255	Blood pressure QTL 255	3.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	191019702	246062233	Rat
631215	Stl8	Serum triglyceride level QTL 8	9.27	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	1	225126575	260522016	Rat
631843	Bw116	Body weight QTL 116	4.1	0.016	abdominal adipose amount (VT:1000220)	abdominal fat pad weight (CMO:0000088)	1	224054293	260122809	Rat
2300175	Bmd40	Bone mineral density QTL 40	15.4	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	1	201554356	246554356	Rat
731175	Uae20	Urinary albumin excretion QTL 20	3.5	0.0018	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	221264111	259647894	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	151162512	256448636	Rat
724538	Kidm1	Kidney mass QTL 1	3.2		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	213707201	252085212	Rat
2293655	Bss36	Bone structure and strength QTL 36	10.66	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	1	201554356	246554356	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	150700142	252085212	Rat
734769	Niddm58	Non-insulin dependent diabetes mellitus QTL 58			body mass (VT:0001259)	body weight (CMO:0000012)	1	224569538	260122809	Rat
734768	Niddm59	Non-insulin dependent diabetes mellitus QTL 59			body mass (VT:0001259)	body weight (CMO:0000012)	1	213843987	258843987	Rat
1358890	Bp259	Blood pressure QTL 259	3.06		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	210702053	260522016	Rat
724533	Rf51	Renal function QTL 51	5.3	0.0002	kidney plasma flow trait (VT:0005524)	renal plasma flow (CMO:0001914)	1	218753816	256448513	Rat
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	156677124	256448636	Rat
634313	Niddm43	Non-insulin dependent diabetes mellitus QTL 43			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	199050459	259647894	Rat
1549910	Bw54	Body weight QTL 54		0.05	body mass (VT:0001259)	body weight (CMO:0000012)	1	214647894	259647894	Rat
70211	Niddm24	Non-insulin dependent diabetes mellitus QTL 24	3.79		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	214647894	259647894	Rat
1357399	Bw45	Body weight QTL 45	3.05		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	1	206329708	251329708	Rat
724552	Glom2	Glomerulus QTL 2	3.3	0.0001	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	1	222363780	260522016	Rat
2316896	Gluco57	Glucose level QTL 57	7.2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	228985440	245907899	Rat
1357404	Bw42	Body weight QTL 42	4.49	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	1	206329708	251329708	Rat
10053715	Scort24	Serum corticosterone level QTL 24	2.13	0.0088	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	1	221414816	260522016	Rat
61400	Niddm1	Non-insulin dependent diabetes mellitus QTL 1	11		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	218753689	245907899	Rat
10059587	Bw173	Body weight QTL 173	3.23	0.025	body mass (VT:0001259)	body weight (CMO:0000012)	1	202069611	247069611	Rat
2292216	Bw80	Body weight QTL 80	3.23	0.0019	body mass (VT:0001259)	body weight (CMO:0000012)	1	213533809	243914901	Rat
2292220	Bp306	Blood pressure QTL 306	3.47	0.00087	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	164310393	243914901	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	151162512	256448636	Rat
7387289	Uae45	Urinary albumin excretion QTL 45	2.86	0.0021	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	223262787	260522016	Rat
8655855	Arrd3	Age-related retinal degeneration QTL 3	3.07		lens clarity trait (VT:0001304)	cataract incidence/prevalence measurement (CMO:0001585)	1	183970203	243914901	Rat
1581544	Rf52	Renal function QTL 52		0.05	urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	1	232156370	259647894	Rat
1600363	Hc6	Hypercalciuria QTL 6	2.7		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	203995416	244113296	Rat
631536	Lnnr2	Liver neoplastic nodule remodeling QTL 2	2.9	0.0005	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	1	233948574	260522016	Rat
738032	Hcas5	Hepatocarcinoma susceptibility QTL 5	3.12		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	176426412	257976495	Rat
1358191	Ept10	Estrogen-induced pituitary tumorigenesis QTL 10	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	192825253	243914732	Rat
2302040	Pia35	Pristane induced arthritis QTL 35	3.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	1	216255568	260522016	Rat
631669	Iddm9	Insulin dependent diabetes mellitus QTL 9	2.8	0.039	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	233190394	258625266	Rat
7394701	Uae46	Urinary albumin excretion QTL 46	3.6	0.0056	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	201554356	246554356	Rat
1598821	Rf55	Renal function QTL 55	6.3		renal blood flow trait (VT:2000006)	ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)	1	218748008	257976495	Rat

Markers in Region

RH134003

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	243,888,143 - 243,888,357 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	264,776,243 - 264,776,456	NCBI	Rnor6.0
Rnor_5.0	1	272,218,632 - 272,218,845	UniSTS	Rnor5.0
RGSC_v3.4	1	250,093,087 - 250,093,300	UniSTS	RGSC3.4
Celera	1	239,699,274 - 239,699,487	UniSTS
RH 3.4 Map	1	1623.4	UniSTS
Cytogenetic Map	1	q54	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014247	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589510	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC121209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY928801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC083580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN932851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ176638	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000048843 ⟹ ENSRNOP00000042095

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	243,880,022 - 243,888,423 (+)	Ensembl
Rnor_6.0 Ensembl	1	264,768,112 - 264,776,616 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000086766 ⟹ ENSRNOP00000075697

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	1	264,768,105 - 264,776,516 (+)	Ensembl

RefSeq Acc Id:

NM_001014247 ⟹ NP_001014269

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,832,099 - 253,837,614 (+)	NCBI
mRatBN7.2	1	243,882,941 - 243,888,454 (+)	NCBI
Rnor_6.0	1	264,771,040 - 264,776,553 (+)	NCBI
Rnor_5.0	1	272,206,770 - 272,218,957 (+)	NCBI
RGSC_v3.4	1	250,087,884 - 250,093,397 (+)	RGD
Celera	1	239,694,071 - 239,699,584 (+)	RGD

Sequence:

show sequence

GTTGCCCTGGAGGCCCCTGGCCAGGCCTGAACCTCTGCCACCATGGCCATTGTGCACACTCTGC
CAGTGCCACTGGAGCCCGCACGTGAGACAGCCACTGCCCCACAAACTCCAGCAATGGGCAGCGT
GAGCAGTCTTATCTCAGGCCGGCCCTGTCCTGGGGGACCTGCTCCTCAACGCCACCATGGTGTC
CCTGGGCCTACCTTCTTCCGCCAGCAGGATGGGCTGCTCCGGGGTGGCTATGAGGCCCAGGAAC
CACTCTGCCCAGCTGTGCCACCCAGGAAGACTGTCCCAGGCAACAGCTTTACCTATGTCAATGA
GGACTTCCGGACAGAGTCACCTCCCAGCCCAAGCAGTGATGTCGAAGATCCCCGAGAACATCAG
GCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAGGCTGGAGA
AGAATATGGAGAAGATCCTGATCCGACCAACAGCCTTCAAGCCAGTGCTACCCAAACCTCGAGG
GGCGCCATCCCTACCTGGCTTCCTTGGTCCTCGAGCTGCTGGGCTATCTGGGAGCCAGGGCAGC
CTGACACAGCTGTTTGGGGGGCCAGCCTCTTCCTCCTCCTCTTCCTCTTCCTCCTCTGCTACTG
ACAAACCCTTGGCACTCAGCGGTTGGGCCAGTGGCTGCCCTTCAGGAACACTGTCAGACTCTGG
CCGAAATTCTTTATCAAGCTTGCCCACCTACAGCACCGGAGGTGCCGAGCCAACTGCCAACTCC
CCAGGTGGGCACCTGCCCTCCCACGGCCCTGGCCGAGGGCCACTGCCTGGTCCAGCCCGAGGGG
TCCCTACTGGGCCCTCCCATTCAGACAGTGGCCGGTCCTCCTCCAGCAAAAGCACAGGTTCCTT
GGGGGCTCGTGTAGCTGGGGGGCTCTTGGGCAGTGGGGCCCGGGCCTCCCCTGGCAGCAGTTCG
GGTGGAGACCGCTCCCCACCCCCTCCACCACCTCCACCCCCTTCGGATGAGGCCTTGCTACACT
GTGTCCTGGAAGGGAAGCTTCGAGACCGAGAGGCAGAGCTGCAGCAGCTGCGGGACAGTGTGGA
TGAGAGTGAGGCCGCCGTGTGTCAGGCATTCGGGGCACGGCAGCGGCGCTGGCCAGGAGAACGA
GAGGACTGTGCCTCTCACGCACAGCAGGCCACACAGCGTGTCCAGCGGGCTCAACAGCTGCTAC
AACTGCAAGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTTGCAGGATGACTTCGCCCAGCTGCT
GCAGGAGCGAGAGCAGCTGGAGCGCCGCTGTGCTACTTTTGAAAGGGAGCAGCAGGAACTTGGG
CCACGGCTAGAGGAGACCAAATGGGAGGTGTGTCAGAAATCAGGTGAGATCTCCCTTCTGAAGC
AGCAACTGAAGGAATCTCAGGCAGAGCTGGTCCAGAAGGGTAGTGAGCTGGTGGCGCTGCGGGT
GGCCCTTCGAGAGGCCCGGGCTGCCTTGCGGGTCAGTGAGGGCCGTGCCCGGGGCCTGCAGGAG
GCAGCCCGAGCTCGGGAGCTGGAGCTGGAGGCCTGCTCACAGGAGCTACAGCGGTACCGCCAGG
AGGCTGAGCAGCTCCGGGAGAAGGCTAGGCATTTGGATGCTGAAGCAGCAGGACTCCGGGAGCC
CCCTGTACCCCCGGCTACCACCGACCCGTTCCTCCTGGCGGAGAGTGATGAGGCTAAGGTGCAG
CGGGCAGCCGCTGGGACAGGGGGTAGCCTGCGGGCTCAGGTGGAACGGTTGCGCCAAGAACTGC
AGCGGGAGCAGCGGCGGGGAGATGAACAACGGAACAGCTTTGAGGGGGAGCGGCTGGCCTGGCA
GGCGGAGAAGGAACAGGTGATCCGCTACCAGAAGCAGCTGCAGCACAACTATGTCCAGATGTAC
CGGCGTAACCGACAGCTGGAGCAGGAACTGCAGCAACTGAGCCTAGAGCTGGAGGCCCGGGAGC
TTGCTGATTTGGGCTTGTCGGAGCCGGCCCCTTGCATCTGTCTGGAGGAGATCACTGCCACTGA
AATCTAGGACTTTGCAAGGGGTGCGAGCCACCGCACCACCTGCACCGGGATCCATCGAGCAAGC
GCTCCAGGTCTCAGAGCCAAAAGGCCTCTGCCGAGCATTCGGGTGGCCCCATAACTTGGAGAAG
CAGAATCAACCCCCCTGCAGTTCAGTGTCACTGTCACCCAGAGGCTCCTGCCTACGCTGCCATT
TCACTCCCCACCGCCGCCACTGCCAGTCCACTCCAGCTGGGAAAGGAAAGGGGGCTAACCTGTC
CCCACATTCTACCTGCCTGAAGCCAGAGAGAACCAGATGGCACCAGCTGCCCCAGATGTGCCTG
CCCTCAATATGCCCACGTGGAGGGGCGGGACTAGGAATGGGGCTGATCCCCATGTCCCAGCTCC
GCAAGCCTCTTGTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGCAATGTCTTGT
TTATTTGTGTTCGTGACCAAGCCGCCCTCCCTAGTTCCAGGGTTATGGCCTCGTTCCCACTTGT
ATATTTTTCACACTGTAAATTTCTTGTACAAACCCAAAGGGGAAAAAAATTAAAAAAAAAAAGT
TTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006231547 ⟹ XP_006231609

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,828,640 - 253,837,614 (+)	NCBI
mRatBN7.2	1	243,879,460 - 243,888,489 (+)	NCBI
Rnor_6.0	1	264,767,480 - 264,776,553 (+)	NCBI
Rnor_5.0	1	272,206,770 - 272,218,957 (+)	NCBI

Sequence:

show sequence

TGGCTGATAAATTGCTGGAAGGGGCCGCCAGGTGGCGCCAGTTCGGAAAAATCCTAGTGTGTGA
CCTCCAGCCTGTTGAGGGTGGGACAGAGGGACAGACTGCGACCGAGCCAGTCCCTCAGCTTGTG
CCTGGGAGCCAGCAACCGGAGCTGACCCCCCTCGGCCTCCCTTTGGACCGGGAAGCTAGACACT
GAGGAGGAAAGCTTCTCCTAGAGGAGCTGTGGGGGAGGGGCAGGCGCCGCGCTTTGGTTCTTTG
TGCTGGAACAATGACCAGCTGCCGCCGGCCCTTGGGCTCCGGCAGGGATAAACGATGACCCGCT
CGACAAGTCTCGAGCCAGCTGAACCTCCTAACACACGCAGTCTCTAGGCCACTCTGGGAGGAAT
CCCAAGCGCCGCCGTGCAACCCCCGCGTGCGCCCTGGCGGGCACTCGTGACGTGGGTTGCTTGC
GCGTGTCCGCGCCCCGGGGCGGGGACGCCCCTCGGACCCCTCCCCCGTTTGGCGTGCACCGCCC
ACTCGGGCCGGGCGGGGGCTGGTCAGGGCCGGGGGCGCCGGCTAGGCGGAGGCGGGGCCGAGCT
GGGCAGCTCCGAGTGGCCGCGCGCGCGGGCTGGAGCGGGCGGCGCGCCTGTGGAGTGCTGGGGC
GGCCCGGGGCTGAGCATGGAGCAGCGCGGCGGAGGTTGCCCTGGAGGCCCCTGGCCAGGCCTGA
ACCTCTGCCACCATGGCCATTGTGCACACTCTGCCAGTGCCACTGGAGCCCGCACGTGAGACAG
CCACTGCCCCACAAACTCCAGCAATGGGCAGCGTGAGCAGTCTTATCTCAGGCCGGCCCTGTCC
TGGGGGACCTGCTCCTCAACGCCACCATGGTGTCCCTGGGCCTACCTTCTTCCGCCAGCAGGAT
GGGCTGCTCCGGGGTGGCTATGAGGCCCAGGAACCACTCTGCCCAGCTGTGCCACCCAGGAAGA
CTGTCCCAGGCAACAGCTTTACCTATGTCAATGAGGACTTCCGGACAGAGTCACCTCCCAGCCC
AAGCAGTGATGTCGAAGATCCCCGAGAACATCAGGCACACAATGCCCACCTCCGTGGGCCCCCA
CCAAAGCTCATCCCTGTCTCTGGAAGGCTGGAGAAGAATATGGAGAAGATCCTGATCCGACCAA
CAGCCTTCAAGCCAGTGCTACCCAAACCTCGAGGGGCGCCATCCCTACCTGGCTTCCTTGGTCC
TCGAGCTGCTGGGCTATCTGGGAGCCAGGGCAGCCTGACACAGCTGTTTGGGGGGCCAGCCTCT
TCCTCCTCCTCTTCCTCTTCCTCCTCTGCTACTGACAAACCCTTGGCACTCAGCGGTTGGGCCA
GTGGCTGCCCTTCAGGAACACTGTCAGACTCTGGCCGAAATTCTTTATCAAGCTTGCCCACCTA
CAGCACCGGAGGTGCCGAGCCAACTGCCAACTCCCCAGGTGGGCACCTGCCCTCCCACGGCCCT
GGCCGAGGGCCACTGCCTGGTCCAGCCCGAGGGGTCCCTACTGGGCCCTCCCATTCAGACAGTG
GCCGGTCCTCCTCCAGCAAAAGCACAGGTTCCTTGGGGGCTCGTGTAGCTGGGGGGCTCTTGGG
CAGTGGGGCCCGGGCCTCCCCTGGCAGCAGTTCGGGTGGAGACCGCTCCCCACCCCCTCCACCA
CCTCCACCCCCTTCGGATGAGGCCTTGCTACACTGTGTCCTGGAAGGGAAGCTTCGAGACCGAG
AGGCAGAGCTGCAGCAGCTGCGGGACAGTGTGGATGAGAGTGAGGCCGCCGTGTGTCAGGCATT
CGGGGCACGGCAGCGGCGCTGGCCAGGAGAACGAGAGGACTGTGCCTCTCACGCACAGCAGGCC
ACACAGCGTGTCCAGCGGGCTCAACAGCTGCTACAACTGCAAGTGTTCCAGCTGCAGCAAGAGA
AGCGCCAGTTGCAGGATGACTTCGCCCAGCTGCTGCAGGAGCGAGAGCAGCTGGAGCGCCGCTG
TGCTACTTTTGAAAGGGAGCAGCAGGAACTTGGGCCACGGCTAGAGGAGACCAAATGGGAGGTG
TGTCAGAAATCAGGTGAGATCTCCCTTCTGAAGCAGCAACTGAAGGAATCTCAGGCAGAGCTGG
TCCAGAAGGGTAGTGAGCTGGTGGCGCTGCGGGTGGCCCTTCGAGAGGCCCGGGCTGCCTTGCG
GGTCAGTGAGGGCCGTGCCCGGGGCCTGCAGGAGGCAGCCCGAGCTCGGGAGCTGGAGCTGGAG
GCCTGCTCACAGGAGCTACAGCGGTACCGCCAGGAGGCTGAGCAGCTCCGGGAGAAGGCTAGGC
ATTTGGATGCTGAAGCAGCAGGACTCCGGGAGCCCCCTGTACCCCCGGCTACCACCGACCCGTT
CCTCCTGGCGGAGAGTGATGAGGCTAAGGTGCAGCGGGCAGCCGCTGGGACAGGGGGTAGCCTG
CGGGCTCAGGTGGAACGGTTGCGCCAAGAACTGCAGCGGGAGCAGCGGCGGGGAGATGAACAAC
GGAACAGCTTTGAGGGGGAGCGGCTGGCCTGGCAGGCGGAGAAGGAACAGGTGATCCGCTACCA
GAAGCAGCTGCAGCACAACTATGTCCAGATGTACCGGCGTAACCGACAGCTGGAGCAGGAACTG
CAGCAACTGAGCCTAGAGCTGGAGGCCCGGGAGCTTGCTGATTTGGGCTTGTCGGAGCCGGCCC
CTTGCATCTGTCTGGAGGAGATCACTGCCACTGAAATCTAGGACTTTGCAAGGGGTGCGAGCCA
CCGCACCACCTGCACCGGGATCCATCGAGCAAGCGCTCCAGGTCTCAGAGCCAAAAGGCCTCTG
CCGAGCATTCGGGTGGCCCCATAACTTGGAGAAGCAGAATCAACCCCCCTGCAGTTCAGTGTCA
CTGTCACCCAGAGGCTCCTGCCTACGCTGCCATTTCACTCCCCACCGCCGCCACTGCCAGTCCA
CTCCAGCTGGGAAAGGAAAGGGGGCTAACCTGTCCCCACATTCTACCTGCCTGAAGCCAGAGAG
AACCAGATGGCACCAGCTGCCCCAGATGTGCCTGCCCTCAATATGCCCACGTGGAGGGGCGGGA
CTAGGAATGGGGCTGATCCCCATGTCCCAGCTCCGCAAGCCTCTTGTGGGCTGAGGGGGCTGAA
GTCAGACCAAAGGAAGAACTCAGCAATGTCTTGTTTATTTGTGTTCGTGACCAAGCCGCCCTCC
CTAGTTCCAGGGTTATGGCCTCGTTCCCACTTGTATATTTTTCACACTGTAAATTTCTTGTACA
AACCCAAAGGGGAAAAAAATTAAAAAAAAAAAGTTTTGTTAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006231549 ⟹ XP_006231611

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,826,563 - 253,837,614 (+)	NCBI
mRatBN7.2	1	243,878,777 - 243,888,489 (+)	NCBI
Rnor_6.0	1	264,765,619 - 264,776,553 (+)	NCBI
Rnor_5.0	1	272,206,770 - 272,218,957 (+)	NCBI

Sequence:

show sequence

AGAGAGAGAGAGAGAGAGAGCCATGCATTCACTTAAGACATGAACACTCGTGTGTTCAGGAAAA
GACAAGCACAGCGAGGTACCCTAGCTGTCCCAGAGGCAGTGCCACCAGCTCGTGCGACACCCTC
ACCCCCACCCCACCATGTGAGATGGACGCTGAGTTTTTCTGCTGGAGGCTGAGGGAAAGGGGAC
GCCCTGAGACTGTCGGCGGGGGCGGGCGGGGTTTGTCGCACCAGGCGGTTCCTGCTTCCCTGCG
TGCTGCCTGCAGGTGAAGACCCAGACGTAAACAGGCGTTGAACACGTGATTGCTTCGCAGACCG
GTGGGCAGTGCTCCCCAACTCCTGTCTAGGCAGGGACACCCCTCTCATCCACCTCCCCGCTGGT
CCTAGCTAGTTCGTTTCGCCCTGTACAAGGCATTCCACATTTCACCTGGAATGGTGGTAAATCC
TCTCACCCAGAATGGGAGCTCAACGCCCCTGGAGGCATGGATGGCCGGGAGGCCCGGAGAGAGT
TGGGGTTAACTTGGGCTCCTTGCCTTGAAGCTCATTAGCACGTTCTTGGAACCCATATCCTTGG
AAAGGTATCCCAGAGTGGATCTTGATGGCCCGGGACAGCTGCCCGGGTCTCATACACCCAATCC
CAGGAGCAGCTGTCTATAGGTCCTCTTCCTACCGCCACCTCCACCCCTTGCAGGACTGGGCACA
AATAGTCCACCTTTGCAAGAACAGTCTCCCCTCATCCCTCCTCACGGGGAATGCACAAAGAGTA
AACCTTAAACCTAAGGGGAGTTTGCCTCCTCTAGTTGAAAGAAGAACCAGAATGCCCTCTCAGA
AAATGAAAGAGGGGCTGCAGCCCTAGGCCTCTCTCCCCCTCCAGCCCCCACCCCTCACCCTGCC
ACACGCTGAGCCCAGCTGCTGCCTGAGCTTCTGGGCTGGAGGCCAGAAAGGGGAGGAGGCTCTC
GGTGCCCCAGGAGGCAGGGATCAGGGCAAGGCCAGAGGAGGGGGTTTCTGTTGGGGAGAGGGGT
TCAGTCTGTTCAGTCTGAAGCTGAGGAGCTGGAGTGAACCTGAGGGTGGCTAGGCTGTGTTTTC
CTTTCCAGGGAAAAAGAAAGAAAAACAACCCTTTCCATGGAGCTAAAAATAGAGCTGAGAGCCG
GCCAGGCTGTGGCCTGGAAGGAGGGGGGATGCTTCTTCCTGGGGCTGAGCCCAGCCCTGGCAGG
CCTTGGCCCTGGAGGGTGGGGGGCATCGAGGAAGGGAGGATGACCTTGCCAGAAGATGTGAATG
TCAGCTGACCTGACTAGGTCACAGAGACCCCTTCAGGGAAAGTGGGTGGTTTGTGAATGTGATG
TAAGAAGTTGCCTGAGTGGCTGAATACGGCTGTCATTGCGTGGAAGAGAGTTGGGAGACTAAGT
GTATTTAAAGAATGTGACTGGATGCAAAGGACTGTTGTGCACTTTCACATGCGCGAAACACCGA
GTCTTCTGTTGCCCTGGAGGCCCCTGGCCAGGCCTGAACCTCTGCCACCATGGCCATTGTGCAC
ACTCTGCCAGTGCCACTGGAGCCCGCACGTGAGACAGCCACTGCCCCACAAACTCCAGCAATGG
GCAGCGTGAGCAGTCTTATCTCAGGCCGGCCCTGTCCTGGGGGACCTGCTCCTCAACGCCACCA
TGGTGTCCCTGGGCCTACCTTCTTCCGCCAGCAGGATGGGCTGCTCCGGGGTGGCTATGAGGCC
CAGGAACCACTCTGCCCAGCTGTGCCACCCAGGAAGACTGTCCCAGGCAACAGCTTTACCTATG
TCAATGAGGACTTCCGGACAGAGTCACCTCCCAGCCCAAGCAGTGATGTCGAAGATCCCCGAGA
ACATCAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAGG
CTGGAGAAGAATATGGAGAAGATCCTGATCCGACCAACAGCCTTCAAGCCAGTGCTACCCAAAC
CTCGAGGGGCGCCATCCCTACCTGGCTTCCTTGGTCCTCGAGCTGCTGGGCTATCTGGGAGCCA
GGGCAGCCTGACACAGCTGTTTGGGGGGCCAGCCTCTTCCTCCTCCTCTTCCTCTTCCTCCTCT
GCTACTGACAAACCCTTGGCACTCAGCGGTTGGGCCAGTGGCTGCCCTTCAGGAACACTGTCAG
ACTCTGGCCGAAATTCTTTATCAAGCTTGCCCACCTACAGCACCGGAGGTGCCGAGCCAACTGC
CAACTCCCCAGGTGGGCACCTGCCCTCCCACGGCCCTGGCCGAGGGCCACTGCCTGGTCCAGCC
CGAGGGGTCCCTACTGGGCCCTCCCATTCAGACAGTGGCCGGTCCTCCTCCAGCAAAAGCACAG
GTTCCTTGGGGGCTCGTGTAGCTGGGGGGCTCTTGGGCAGTGGGGCCCGGGCCTCCCCTGGCAG
CAGTTCGGGTGGAGACCGCTCCCCACCCCCTCCACCACCTCCACCCCCTTCGGATGAGGCCTTG
CTACACTGTGTCCTGGAAGGGAAGCTTCGAGACCGAGAGGCAGAGCTGCAGCAGCTGCGGGACA
GTGTGGATGAGAGTGAGGCCGCCGTGTGTCAGGCATTCGGGGCACGGCAGCGGCGCTGGCCAGG
AGAACGAGAGGACTGTGCCTCTCACGCACAGCAGGCCACACAGCGTGTCCAGCGGGCTCAACAG
CTGCTACAACTGCAAGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTTGCAGGATGACTTCGCCC
AGCTGCTGCAGGAGCGAGAGCAGCTGGAGCGCCGCTGTGCTACTTTTGAAAGGGAGCAGCAGGA
ACTTGGGCCACGGCTAGAGGAGACCAAATGGGAGGTGTGTCAGAAATCAGGTGAGATCTCCCTT
CTGAAGCAGCAACTGAAGGAATCTCAGGCAGAGCTGGTCCAGAAGGGTAGTGAGCTGGTGGCGC
TGCGGGTGGCCCTTCGAGAGGCCCGGGCTGCCTTGCGGGTCAGTGAGGGCCGTGCCCGGGGCCT
GCAGGAGGCAGCCCGAGCTCGGGAGCTGGAGCTGGAGGCCTGCTCACAGGAGCTACAGCGGTAC
CGCCAGGAGGCTGAGCAGCTCCGGGAGAAGGCTAGGCATTTGGATGCTGAAGCAGCAGGACTCC
GGGAGCCCCCTGTACCCCCGGCTACCACCGACCCGTTCCTCCTGGCGGAGAGTGATGAGGCTAA
GGTGCAGCGGGCAGCCGCTGGGACAGGGGGTAGCCTGCGGGCTCAGGTGGAACGGTTGCGCCAA
GAACTGCAGCGGGAGCAGCGGCGGGGAGATGAACAACGGAACAGCTTTGAGGGGGAGCGGCTGG
CCTGGCAGGCGGAGAAGGAACAGGTGATCCGCTACCAGAAGCAGCTGCAGCACAACTATGTCCA
GATGTACCGGCGTAACCGACAGCTGGAGCAGGAACTGCAGCAACTGAGCCTAGAGCTGGAGGCC
CGGGAGCTTGCTGATTTGGGCTTGTCGGAGCCGGCCCCTTGCATCTGTCTGGAGGAGATCACTG
CCACTGAAATCTAGGACTTTGCAAGGGGTGCGAGCCACCGCACCACCTGCACCGGGATCCATCG
AGCAAGCGCTCCAGGTCTCAGAGCCAAAAGGCCTCTGCCGAGCATTCGGGTGGCCCCATAACTT
GGAGAAGCAGAATCAACCCCCCTGCAGTTCAGTGTCACTGTCACCCAGAGGCTCCTGCCTACGC
TGCCATTTCACTCCCCACCGCCGCCACTGCCAGTCCACTCCAGCTGGGAAAGGAAAGGGGGCTA
ACCTGTCCCCACATTCTACCTGCCTGAAGCCAGAGAGAACCAGATGGCACCAGCTGCCCCAGAT
GTGCCTGCCCTCAATATGCCCACGTGGAGGGGCGGGACTAGGAATGGGGCTGATCCCCATGTCC
CAGCTCCGCAAGCCTCTTGTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGCAAT
GTCTTGTTTATTTGTGTTCGTGACCAAGCCGCCCTCCCTAGTTCCAGGGTTATGGCCTCGTTCC
CACTTGTATATTTTTCACACTGTAAATTTCTTGTACAAACCCAAAGGGGAAAAAAATTAAAAAA
AAAAAGTTTTGTTAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017589508 ⟹ XP_017444997

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,826,281 - 253,837,614 (+)	NCBI
mRatBN7.2	1	243,876,665 - 243,888,489 (+)	NCBI
Rnor_6.0	1	264,765,256 - 264,776,553 (+)	NCBI

Sequence:

show sequence

GGCCGGCCTGGCGGGAGCGGGGAGCCGGGAGCGCTGAGCCCCGAGCCCGCTGAAGAACCAGAGT
TCTATCGCAGTGAGGAAGCAGGCACGCTGGAGCAGGAGTCGAGCCAAAAAGGGAGCAGCGGCGC
AGGTGACGCTGGGTTGCCCTGGAGGCCCCTGGCCAGGCCTGAACCTCTGCCACCATGGCCATTG
TGCACACTCTGCCAGTGCCACTGGAGCCCGCACGTGAGACAGCCACTGCCCCACAAACTCCAGC
AATGGGCAGCGTGAGCAGTCTTATCTCAGGCCGGCCCTGTCCTGGGGGACCTGCTCCTCAACGC
CACCATGGTGTCCCTGGGCCTACCTTCTTCCGCCAGCAGGATGGGCTGCTCCGGGGTGGCTATG
AGGCCCAGGAACCACTCTGCCCAGCTGTGCCACCCAGGAAGACTGTCCCAGGCAACAGCTTTAC
CTATGTCAATGAGGACTTCCGGACAGAGTCACCTCCCAGCCCAAGCAGTGATGTCGAAGATCCC
CGAGAACATCAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTG
GAAGGCTGGAGAAGAATATGGAGAAGATCCTGATCCGACCAACAGCCTTCAAGCCAGTGCTACC
CAAACCTCGAGGGGCGCCATCCCTACCTGGCTTCCTTGGTCCTCGAGCTGCTGGGCTATCTGGG
AGCCAGGGCAGCCTGACACAGCTGTTTGGGGGGCCAGCCTCTTCCTCCTCCTCTTCCTCTTCCT
CCTCTGCTACTGACAAACCCTTGGCACTCAGCGGTTGGGCCAGTGGCTGCCCTTCAGGAACACT
GTCAGACTCTGGCCGAAATTCTTTATCAAGCTTGCCCACCTACAGCACCGGAGGTGCCGAGCCA
ACTGCCAACTCCCCAGGTGGGCACCTGCCCTCCCACGGCCCTGGCCGAGGGCCACTGCCTGGTC
CAGCCCGAGGGGTCCCTACTGGGCCCTCCCATTCAGACAGTGGCCGGTCCTCCTCCAGCAAAAG
CACAGGTTCCTTGGGGGCTCGTGTAGCTGGGGGGCTCTTGGGCAGTGGGGCCCGGGCCTCCCCT
GGCAGCAGTTCGGGTGGAGACCGCTCCCCACCCCCTCCACCACCTCCACCCCCTTCGGATGAGG
CCTTGCTACACTGTGTCCTGGAAGGGAAGCTTCGAGACCGAGAGGCAGAGCTGCAGCAGCTGCG
GGACAGTGTGGATGAGAGTGAGGCCGCCGTGTGTCAGGCATTCGGGGCACGGCAGCGGCGCTGG
CCAGGAGAACGAGAGGACTGTGCCTCTCACGCACAGCAGGCCACACAGCGTGTCCAGCGGGCTC
AACAGCTGCTACAACTGCAAGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTTGCAGGATGACTT
CGCCCAGCTGCTGCAGGAGCGAGAGCAGCTGGAGCGCCGCTGTGCTACTTTTGAAAGGGAGCAG
CAGGAACTTGGGCCACGGCTAGAGGAGACCAAATGGGAGGTGTGTCAGAAATCAGGTGAGATCT
CCCTTCTGAAGCAGCAACTGAAGGAATCTCAGGCAGAGCTGGTCCAGAAGGGTAGTGAGCTGGT
GGCGCTGCGGGTGGCCCTTCGAGAGGCCCGGGCTGCCTTGCGGGTCAGTGAGGGCCGTGCCCGG
GGCCTGCAGGAGGCAGCCCGAGCTCGGGAGCTGGAGCTGGAGGCCTGCTCACAGGAGCTACAGC
GGTACCGCCAGGAGGCTGAGCAGCTCCGGGAGAAGGCTAGGCATTTGGATGCTGAAGCAGCAGG
ACTCCGGGAGCCCCCTGTACCCCCGGCTACCACCGACCCGTTCCTCCTGGCGGAGAGTGATGAG
GCTAAGGTGCAGCGGGCAGCCGCTGGGACAGGGGGTAGCCTGCGGGCTCAGGTGGAACGGTTGC
GCCAAGAACTGCAGCGGGAGCAGCGGCGGGGAGATGAACAACGGAACAGCTTTGAGGGGGAGCG
GCTGGCCTGGCAGGCGGAGAAGGAACAGGTGATCCGCTACCAGAAGCAGCTGCAGCACAACTAT
GTCCAGATGTACCGGCGTAACCGACAGCTGGAGCAGGAACTGCAGCAACTGAGCCTAGAGCTGG
AGGCCCGGGAGCTTGCTGATTTGGGCTTGTCGGAGCCGGCCCCTTGCATCTGTCTGGAGGAGAT
CACTGCCACTGAAATCTAGGACTTTGCAAGGGGTGCGAGCCACCGCACCACCTGCACCGGGATC
CATCGAGCAAGCGCTCCAGGTCTCAGAGCCAAAAGGCCTCTGCCGAGCATTCGGGTGGCCCCAT
AACTTGGAGAAGCAGAATCAACCCCCCTGCAGTTCAGTGTCACTGTCACCCAGAGGCTCCTGCC
TACGCTGCCATTTCACTCCCCACCGCCGCCACTGCCAGTCCACTCCAGCTGGGAAAGGAAAGGG
GGCTAACCTGTCCCCACATTCTACCTGCCTGAAGCCAGAGAGAACCAGATGGCACCAGCTGCCC
CAGATGTGCCTGCCCTCAATATGCCCACGTGGAGGGGCGGGACTAGGAATGGGGCTGATCCCCA
TGTCCCAGCTCCGCAAGCCTCTTGTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCA
GCAATGTCTTGTTTATTTGTGTTCGTGACCAAGCCGCCCTCCCTAGTTCCAGGGTTATGGCCTC
GTTCCCACTTGTATATTTTTCACACTGTAAATTTCTTGTACAAACCCAAAGGGGAAAAAAATTA
AAAAAAAAAAGTTTTGTTAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017589509 ⟹ XP_017444998

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,824,073 - 253,837,614 (+)	NCBI
mRatBN7.2	1	243,877,159 - 243,888,489 (+)	NCBI
Rnor_6.0	1	264,765,256 - 264,776,553 (+)	NCBI

Sequence:

show sequence

GGCCGGCCTGGCGGGAGCGGGGAGCCGGGAGCGCTGAGCCCCGAGCCCGCTGAAGAACCAGAGT
TCTATCGCAGTGAGGAAGCAGGCACGCTGGAGCAGGAGTCGAGCCAAAAAGGGAGCAGCGGCGC
AGGTTGCCCTGGAGGCCCCTGGCCAGGCCTGAACCTCTGCCACCATGGCCATTGTGCACACTCT
GCCAGTGCCACTGGAGCCCGCACGTGAGACAGCCACTGCCCCACAAACTCCAGCAATGGGCAGC
GTGAGCAGTCTTATCTCAGGCCGGCCCTGTCCTGGGGGACCTGCTCCTCAACGCCACCATGGTG
TCCCTGGGCCTACCTTCTTCCGCCAGCAGGATGGGCTGCTCCGGGGTGGCTATGAGGCCCAGGA
ACCACTCTGCCCAGCTGTGCCACCCAGGAAGACTGTCCCAGGCAACAGCTTTACCTATGTCAAT
GAGGACTTCCGGACAGAGTCACCTCCCAGCCCAAGCAGTGATGTCGAAGATCCCCGAGAACATC
AGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAGGCTGGA
GAAGAATATGGAGAAGATCCTGATCCGACCAACAGCCTTCAAGCCAGTGCTACCCAAACCTCGA
GGGGCGCCATCCCTACCTGGCTTCCTTGGTCCTCGAGCTGCTGGGCTATCTGGGAGCCAGGGCA
GCCTGACACAGCTGTTTGGGGGGCCAGCCTCTTCCTCCTCCTCTTCCTCTTCCTCCTCTGCTAC
TGACAAACCCTTGGCACTCAGCGGTTGGGCCAGTGGCTGCCCTTCAGGAACACTGTCAGACTCT
GGCCGAAATTCTTTATCAAGCTTGCCCACCTACAGCACCGGAGGTGCCGAGCCAACTGCCAACT
CCCCAGGTGGGCACCTGCCCTCCCACGGCCCTGGCCGAGGGCCACTGCCTGGTCCAGCCCGAGG
GGTCCCTACTGGGCCCTCCCATTCAGACAGTGGCCGGTCCTCCTCCAGCAAAAGCACAGGTTCC
TTGGGGGCTCGTGTAGCTGGGGGGCTCTTGGGCAGTGGGGCCCGGGCCTCCCCTGGCAGCAGTT
CGGGTGGAGACCGCTCCCCACCCCCTCCACCACCTCCACCCCCTTCGGATGAGGCCTTGCTACA
CTGTGTCCTGGAAGGGAAGCTTCGAGACCGAGAGGCAGAGCTGCAGCAGCTGCGGGACAGTGTG
GATGAGAGTGAGGCCGCCGTGTGTCAGGCATTCGGGGCACGGCAGCGGCGCTGGCCAGGAGAAC
GAGAGGACTGTGCCTCTCACGCACAGCAGGCCACACAGCGTGTCCAGCGGGCTCAACAGCTGCT
ACAACTGCAAGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTTGCAGGATGACTTCGCCCAGCTG
CTGCAGGAGCGAGAGCAGCTGGAGCGCCGCTGTGCTACTTTTGAAAGGGAGCAGCAGGAACTTG
GGCCACGGCTAGAGGAGACCAAATGGGAGGTGTGTCAGAAATCAGGTGAGATCTCCCTTCTGAA
GCAGCAACTGAAGGAATCTCAGGCAGAGCTGGTCCAGAAGGGTAGTGAGCTGGTGGCGCTGCGG
GTGGCCCTTCGAGAGGCCCGGGCTGCCTTGCGGGTCAGTGAGGGCCGTGCCCGGGGCCTGCAGG
AGGCAGCCCGAGCTCGGGAGCTGGAGCTGGAGGCCTGCTCACAGGAGCTACAGCGGTACCGCCA
GGAGGCTGAGCAGCTCCGGGAGAAGGCTAGGCATTTGGATGCTGAAGCAGCAGGACTCCGGGAG
CCCCCTGTACCCCCGGCTACCACCGACCCGTTCCTCCTGGCGGAGAGTGATGAGGCTAAGGTGC
AGCGGGCAGCCGCTGGGACAGGGGGTAGCCTGCGGGCTCAGGTGGAACGGTTGCGCCAAGAACT
GCAGCGGGAGCAGCGGCGGGGAGATGAACAACGGAACAGCTTTGAGGGGGAGCGGCTGGCCTGG
CAGGCGGAGAAGGAACAGGTGATCCGCTACCAGAAGCAGCTGCAGCACAACTATGTCCAGATGT
ACCGGCGTAACCGACAGCTGGAGCAGGAACTGCAGCAACTGAGCCTAGAGCTGGAGGCCCGGGA
GCTTGCTGATTTGGGCTTGTCGGAGCCGGCCCCTTGCATCTGTCTGGAGGAGATCACTGCCACT
GAAATCTAGGACTTTGCAAGGGGTGCGAGCCACCGCACCACCTGCACCGGGATCCATCGAGCAA
GCGCTCCAGGTCTCAGAGCCAAAAGGCCTCTGCCGAGCATTCGGGTGGCCCCATAACTTGGAGA
AGCAGAATCAACCCCCCTGCAGTTCAGTGTCACTGTCACCCAGAGGCTCCTGCCTACGCTGCCA
TTTCACTCCCCACCGCCGCCACTGCCAGTCCACTCCAGCTGGGAAAGGAAAGGGGGCTAACCTG
TCCCCACATTCTACCTGCCTGAAGCCAGAGAGAACCAGATGGCACCAGCTGCCCCAGATGTGCC
TGCCCTCAATATGCCCACGTGGAGGGGCGGGACTAGGAATGGGGCTGATCCCCATGTCCCAGCT
CCGCAAGCCTCTTGTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGCAATGTCTT
GTTTATTTGTGTTCGTGACCAAGCCGCCCTCCCTAGTTCCAGGGTTATGGCCTCGTTCCCACTT
GTATATTTTTCACACTGTAAATTTCTTGTACAAACCCAAAGGGGAAAAAAATTAAAAAAAAAAA
GTTTTGTTAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_063270009 ⟹ XP_063126079

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,824,073 - 253,837,614 (+)	NCBI

RefSeq Acc Id:

XM_063270014 ⟹ XP_063126084

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,828,315 - 253,837,614 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001014269	(Get FASTA)	NCBI Sequence Viewer
	XP_006231609	(Get FASTA)	NCBI Sequence Viewer
	XP_006231611	(Get FASTA)	NCBI Sequence Viewer
	XP_017444997	(Get FASTA)	NCBI Sequence Viewer
	XP_017444998	(Get FASTA)	NCBI Sequence Viewer
	XP_063126079	(Get FASTA)	NCBI Sequence Viewer
	XP_063126084	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH83580	(Get FASTA)	NCBI Sequence Viewer
	AAX28869	(Get FASTA)	NCBI Sequence Viewer
	ABA06435	(Get FASTA)	NCBI Sequence Viewer
	EDL94299	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000042095.4
GenBank Protein	Q3LUD4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001014269 ⟸ NM_001014247

- UniProtKB:

Q24K74 (UniProtKB/Swiss-Prot), Q3LUD4 (UniProtKB/Swiss-Prot), F7FLS6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAIVHTLPVPLEPARETATAPQTPAMGSVSSLISGRPCPGGPAPQRHHGVPGPTFFRQQDGLLR
GGYEAQEPLCPAVPPRKTVPGNSFTYVNEDFRTESPPSPSSDVEDPREHQAHNAHLRGPPPKLI
PVSGRLEKNMEKILIRPTAFKPVLPKPRGAPSLPGFLGPRAAGLSGSQGSLTQLFGGPASSSSS
SSSSSATDKPLALSGWASGCPSGTLSDSGRNSLSSLPTYSTGGAEPTANSPGGHLPSHGPGRGP
LPGPARGVPTGPSHSDSGRSSSSKSTGSLGARVAGGLLGSGARASPGSSSGGDRSPPPPPPPPP
SDEALLHCVLEGKLRDREAELQQLRDSVDESEAAVCQAFGARQRRWPGEREDCASHAQQATQRV
QRAQQLLQLQVFQLQQEKRQLQDDFAQLLQEREQLERRCATFEREQQELGPRLEETKWEVCQKS
GEISLLKQQLKESQAELVQKGSELVALRVALREARAALRVSEGRARGLQEAARARELELEACSQ
ELQRYRQEAEQLREKARHLDAEAAGLREPPVPPATTDPFLLAESDEAKVQRAAAGTGGSLRAQV
ERLRQELQREQRRGDEQRNSFEGERLAWQAEKEQVIRYQKQLQHNYVQMYRRNRQLEQELQQLS
LELEARELADLGLSEPAPCICLEEITATEI

hide sequence

RefSeq Acc Id:	XP_006231611 ⟸ XM_006231549
- Peptide Label:	isoform X1
- UniProtKB:	Q3LUD4 (UniProtKB/Swiss-Prot), Q24K74 (UniProtKB/Swiss-Prot), F7FLS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAIVHTLPVPLEPARETATAPQTPAMGSVSSLISGRPCPGGPAPQRHHGVPGPTFFRQQDGLLR GGYEAQEPLCPAVPPRKTVPGNSFTYVNEDFRTESPPSPSSDVEDPREHQAHNAHLRGPPPKLI PVSGRLEKNMEKILIRPTAFKPVLPKPRGAPSLPGFLGPRAAGLSGSQGSLTQLFGGPASSSSS SSSSSATDKPLALSGWASGCPSGTLSDSGRNSLSSLPTYSTGGAEPTANSPGGHLPSHGPGRGP LPGPARGVPTGPSHSDSGRSSSSKSTGSLGARVAGGLLGSGARASPGSSSGGDRSPPPPPPPPP SDEALLHCVLEGKLRDREAELQQLRDSVDESEAAVCQAFGARQRRWPGEREDCASHAQQATQRV QRAQQLLQLQVFQLQQEKRQLQDDFAQLLQEREQLERRCATFEREQQELGPRLEETKWEVCQKS GEISLLKQQLKESQAELVQKGSELVALRVALREARAALRVSEGRARGLQEAARARELELEACSQ ELQRYRQEAEQLREKARHLDAEAAGLREPPVPPATTDPFLLAESDEAKVQRAAAGTGGSLRAQV ERLRQELQREQRRGDEQRNSFEGERLAWQAEKEQVIRYQKQLQHNYVQMYRRNRQLEQELQQLS LELEARELADLGLSEPAPCICLEEITATEI hide sequence

RefSeq Acc Id:	XP_006231609 ⟸ XM_006231547
- Peptide Label:	isoform X1
- UniProtKB:	Q3LUD4 (UniProtKB/Swiss-Prot), Q24K74 (UniProtKB/Swiss-Prot), F7FLS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAIVHTLPVPLEPARETATAPQTPAMGSVSSLISGRPCPGGPAPQRHHGVPGPTFFRQQDGLLR GGYEAQEPLCPAVPPRKTVPGNSFTYVNEDFRTESPPSPSSDVEDPREHQAHNAHLRGPPPKLI PVSGRLEKNMEKILIRPTAFKPVLPKPRGAPSLPGFLGPRAAGLSGSQGSLTQLFGGPASSSSS SSSSSATDKPLALSGWASGCPSGTLSDSGRNSLSSLPTYSTGGAEPTANSPGGHLPSHGPGRGP LPGPARGVPTGPSHSDSGRSSSSKSTGSLGARVAGGLLGSGARASPGSSSGGDRSPPPPPPPPP SDEALLHCVLEGKLRDREAELQQLRDSVDESEAAVCQAFGARQRRWPGEREDCASHAQQATQRV QRAQQLLQLQVFQLQQEKRQLQDDFAQLLQEREQLERRCATFEREQQELGPRLEETKWEVCQKS GEISLLKQQLKESQAELVQKGSELVALRVALREARAALRVSEGRARGLQEAARARELELEACSQ ELQRYRQEAEQLREKARHLDAEAAGLREPPVPPATTDPFLLAESDEAKVQRAAAGTGGSLRAQV ERLRQELQREQRRGDEQRNSFEGERLAWQAEKEQVIRYQKQLQHNYVQMYRRNRQLEQELQQLS LELEARELADLGLSEPAPCICLEEITATEI hide sequence

RefSeq Acc Id:	XP_017444997 ⟸ XM_017589508
- Peptide Label:	isoform X1
- UniProtKB:	Q3LUD4 (UniProtKB/Swiss-Prot), Q24K74 (UniProtKB/Swiss-Prot), F7FLS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAIVHTLPVPLEPARETATAPQTPAMGSVSSLISGRPCPGGPAPQRHHGVPGPTFFRQQDGLLR GGYEAQEPLCPAVPPRKTVPGNSFTYVNEDFRTESPPSPSSDVEDPREHQAHNAHLRGPPPKLI PVSGRLEKNMEKILIRPTAFKPVLPKPRGAPSLPGFLGPRAAGLSGSQGSLTQLFGGPASSSSS SSSSSATDKPLALSGWASGCPSGTLSDSGRNSLSSLPTYSTGGAEPTANSPGGHLPSHGPGRGP LPGPARGVPTGPSHSDSGRSSSSKSTGSLGARVAGGLLGSGARASPGSSSGGDRSPPPPPPPPP SDEALLHCVLEGKLRDREAELQQLRDSVDESEAAVCQAFGARQRRWPGEREDCASHAQQATQRV QRAQQLLQLQVFQLQQEKRQLQDDFAQLLQEREQLERRCATFEREQQELGPRLEETKWEVCQKS GEISLLKQQLKESQAELVQKGSELVALRVALREARAALRVSEGRARGLQEAARARELELEACSQ ELQRYRQEAEQLREKARHLDAEAAGLREPPVPPATTDPFLLAESDEAKVQRAAAGTGGSLRAQV ERLRQELQREQRRGDEQRNSFEGERLAWQAEKEQVIRYQKQLQHNYVQMYRRNRQLEQELQQLS LELEARELADLGLSEPAPCICLEEITATEI hide sequence

RefSeq Acc Id:	XP_017444998 ⟸ XM_017589509
- Peptide Label:	isoform X1
- UniProtKB:	Q3LUD4 (UniProtKB/Swiss-Prot), Q24K74 (UniProtKB/Swiss-Prot), F7FLS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAIVHTLPVPLEPARETATAPQTPAMGSVSSLISGRPCPGGPAPQRHHGVPGPTFFRQQDGLLR GGYEAQEPLCPAVPPRKTVPGNSFTYVNEDFRTESPPSPSSDVEDPREHQAHNAHLRGPPPKLI PVSGRLEKNMEKILIRPTAFKPVLPKPRGAPSLPGFLGPRAAGLSGSQGSLTQLFGGPASSSSS SSSSSATDKPLALSGWASGCPSGTLSDSGRNSLSSLPTYSTGGAEPTANSPGGHLPSHGPGRGP LPGPARGVPTGPSHSDSGRSSSSKSTGSLGARVAGGLLGSGARASPGSSSGGDRSPPPPPPPPP SDEALLHCVLEGKLRDREAELQQLRDSVDESEAAVCQAFGARQRRWPGEREDCASHAQQATQRV QRAQQLLQLQVFQLQQEKRQLQDDFAQLLQEREQLERRCATFEREQQELGPRLEETKWEVCQKS GEISLLKQQLKESQAELVQKGSELVALRVALREARAALRVSEGRARGLQEAARARELELEACSQ ELQRYRQEAEQLREKARHLDAEAAGLREPPVPPATTDPFLLAESDEAKVQRAAAGTGGSLRAQV ERLRQELQREQRRGDEQRNSFEGERLAWQAEKEQVIRYQKQLQHNYVQMYRRNRQLEQELQQLS LELEARELADLGLSEPAPCICLEEITATEI hide sequence

Ensembl Acc Id:

ENSRNOP00000042095 ⟸ ENSRNOT00000048843

Ensembl Acc Id:

ENSRNOP00000075697 ⟸ ENSRNOT00000086766

RefSeq Acc Id:	XP_063126079 ⟸ XM_063270009
- Peptide Label:	isoform X1
- UniProtKB:	Q3LUD4 (UniProtKB/Swiss-Prot), Q24K74 (UniProtKB/Swiss-Prot), F7FLS6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063126084 ⟸ XM_063270014
- Peptide Label:	isoform X1
- UniProtKB:	Q3LUD4 (UniProtKB/Swiss-Prot), Q24K74 (UniProtKB/Swiss-Prot), F7FLS6 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q3LUD4-F1-model_v2	AlphaFold	Q3LUD4	1-670	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13690955

Promoter ID:

EPDNEW_R1471

Type:

initiation region

Name:

Lzts2_1

Description:

leucine zipper tumor suppressor 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	264,768,060 - 264,768,120	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359249	AgrOrtholog
BioCyc Gene	G2FUF-55569	BioCyc
Ensembl Genes	ENSRNOG00000014969	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000048843.6	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7129196	IMAGE-MGC_LOAD
InterPro	LZTS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LZTS2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:365468	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:94184	IMAGE-MGC_LOAD
NCBI Gene	365468	ENTREZGENE
PANTHER	PTHR19354	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR19354:SF4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Fez1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Lzts2	PhenoGen
RatGTEx	ENSRNOG00000014969	RatGTEx
UniProt	A6JHH5_RAT	UniProtKB/TrEMBL
	F7FLS6	ENTREZGENE, UniProtKB/TrEMBL
	LZTS2_RAT	UniProtKB/Swiss-Prot
	Q24K74	ENTREZGENE
	Q3LUD4	ENTREZGENE
	Q5XIU0_RAT	UniProtKB/TrEMBL
UniProt Secondary	Q24K74	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-07-27	Lzts2	leucine zipper tumor suppressor 2	Lzts2	leucine zipper, putative tumor suppressor 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-11-17	Lzts2	leucine zipper, putative tumor suppressor 2			Symbol and Name updated	1299863	APPROVED
2005-07-29	LOC365468	similar to Putative tumor suppressor LAPSER1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI