Ddrgk1 (DDRGK domain containing 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Ddrgk1 (DDRGK domain containing 1) Rattus norvegicus
Analyze
Symbol: Ddrgk1
Name: DDRGK domain containing 1
RGD ID: 1309979
Description: Predicted to enable UFM1-modified protein reader activity and ubiquitin-like protein ligase binding activity. Involved in negative regulation of apoptotic process. Predicted to be located in membrane and nucleolus. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human DDRGK1 (DDRGK domain containing 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; leflunomide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DDRGK domain-containing protein 1; LOC296162; RGD1309979; similar to chromosome 20 open reading frame 116
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83138,315,006 - 138,336,691 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3138,315,282 - 138,335,766 (-)EnsemblGRCr8
mRatBN7.23117,861,916 - 117,882,680 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3117,861,653 - 117,882,680 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3121,765,667 - 121,776,915 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03130,363,251 - 130,374,520 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03128,021,802 - 128,033,050 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03123,195,580 - 123,206,828 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3123,195,580 - 123,206,828 (-)Ensemblrn6Rnor6.0
Rnor_5.03129,693,708 - 129,704,956 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43118,284,299 - 118,295,547 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3116,682,282 - 116,693,534 (-)NCBICelera
RGSC_v3.13118,188,916 - 118,200,762 (-)NCBI
Cytogenetic Map3q36NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
cartilage development  (IBA,IEA,ISO)
negative regulation of apoptotic process  (IMP)
negative regulation of gene expression  (IEA,ISO)
negative regulation of IRE1-mediated unfolded protein response  (IBA,IEA,ISO)
negative regulation of PERK-mediated unfolded protein response  (IEA,ISO)
negative regulation of proteasomal ubiquitin-dependent protein catabolic process  (IEA,ISO)
positive regulation of canonical NF-kappaB signal transduction  (IEA,ISO)
positive regulation of cell migration  (IEA,ISO)
positive regulation of cell population proliferation  (IEA,ISO)
positive regulation of gene expression  (IEA,ISO)
positive regulation of I-kappaB phosphorylation  (ISO)
positive regulation of plasma cell differentiation  (IEA,ISO)
positive regulation of proteasomal protein catabolic process  (IEA,ISO)
positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (IEA,ISO)
positive regulation of protein localization to endoplasmic reticulum  (IEA,ISO)
positive regulation of proteolysis involved in protein catabolic process  (IEA,ISO)
positive regulation of reticulophagy  (IEA,ISO)
positive regulation of transcription by RNA polymerase II  (IEA,ISO)
protein K69-linked ufmylation  (IEA,ISO)
protein localization to endoplasmic reticulum  (IEA,ISO)
protein ufmylation  (IEA,ISO)
regulation of insulin secretion involved in cellular response to glucose stimulus  (IMP)
regulation of intracellular estrogen receptor signaling pathway  (IEA,ISO)
regulation of protein stability  (IEA,ISO)
rescue of stalled cytosolic ribosome  (IEA,ISO)
response to endoplasmic reticulum stress  (IEA,ISO)
reticulophagy  (IEA,ISO)
ribosome disassembly  (IEA,ISO)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Ubiquitin fold modifier 1 (UFM1) and its target UFBP1 protect pancreatic beta cells from ER stress-induced apoptosis. Lemaire K, etal., PLoS One. 2011 Apr 6;6(4):e18517. doi: 10.1371/journal.pone.0018517.
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:20018847   PMID:20228063   PMID:23675531   PMID:25219498   PMID:28263186  


Genomics

Comparative Map Data
Ddrgk1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83138,315,006 - 138,336,691 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3138,315,282 - 138,335,766 (-)EnsemblGRCr8
mRatBN7.23117,861,916 - 117,882,680 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3117,861,653 - 117,882,680 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3121,765,667 - 121,776,915 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03130,363,251 - 130,374,520 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03128,021,802 - 128,033,050 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03123,195,580 - 123,206,828 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3123,195,580 - 123,206,828 (-)Ensemblrn6Rnor6.0
Rnor_5.03129,693,708 - 129,704,956 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43118,284,299 - 118,295,547 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3116,682,282 - 116,693,534 (-)NCBICelera
RGSC_v3.13118,188,916 - 118,200,762 (-)NCBI
Cytogenetic Map3q36NCBI
DDRGK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38203,190,350 - 3,204,682 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl203,188,734 - 3,204,700 (-)Ensemblhg38GRCh38
GRCh37203,170,996 - 3,185,328 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36203,119,012 - 3,133,295 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34203,119,012 - 3,133,295NCBI
Celera203,232,967 - 3,247,257 (-)NCBICelera
Cytogenetic Map20p13NCBI
HuRef203,118,864 - 3,133,155 (-)NCBIHuRef
CHM1_1203,171,069 - 3,185,357 (-)NCBICHM1_1
T2T-CHM13v2.0203,221,281 - 3,235,633 (-)NCBIT2T-CHM13v2.0
Ddrgk1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392130,495,955 - 130,506,549 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2130,495,880 - 130,506,579 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm382130,654,033 - 130,664,654 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2130,653,960 - 130,664,659 (-)Ensemblmm10GRCm38
MGSCv372130,479,819 - 130,490,381 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362130,345,072 - 130,356,100 (-)NCBIMGSCv36mm8
Celera2131,878,895 - 131,889,451 (-)NCBICelera
Cytogenetic Map2F1NCBI
cM Map263.24NCBI
Ddrgk1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541514,085,404 - 14,098,856 (-)Ensembl
ChiLan1.0NW_00495541514,085,404 - 14,098,220 (-)NCBIChiLan1.0ChiLan1.0
DDRGK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2214,157,301 - 4,171,449 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1204,154,126 - 4,168,261 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0203,276,292 - 3,290,433 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1203,038,779 - 3,052,789 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl203,038,779 - 3,052,789 (-)EnsemblpanPan2panpan1.1
DDRGK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12418,085,865 - 18,098,868 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2418,084,725 - 18,097,157 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2417,914,255 - 17,927,262 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02418,504,362 - 18,517,360 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2418,504,223 - 18,517,432 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12418,098,065 - 18,111,061 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02418,210,878 - 18,223,902 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02418,538,034 - 18,551,030 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ddrgk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640167,084,969 - 167,095,016 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648515,516,302 - 15,526,376 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648515,516,348 - 15,526,380 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DDRGK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1732,479,977 - 32,491,396 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11732,479,981 - 32,491,401 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21736,851,089 - 36,862,509 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DDRGK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1233,846,591 - 33,879,770 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl233,860,439 - 33,880,101 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366607110,639,095 - 10,652,062 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ddrgk1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247414,292,256 - 4,305,504 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247414,292,256 - 4,305,424 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Ddrgk1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15110,395,351 - 110,405,971 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ddrgk1
107 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:44
Count of miRNA genes:43
Interacting mature miRNAs:44
Transcripts:ENSRNOT00000030192
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
2301414Kidm37Kidney mass QTL 370.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)396509147141509147Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)349872657138829559Rat
7387306Bw124Body weight QTL 1243.20.0003body mass (VT:0001259)body weight (CMO:0000012)3104545086149545086Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1300111Rf12Renal function QTL 123.78renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)381425008141509147Rat
1600376Arunc5Aerobic running capacity QTL 50.21exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)393829559138829559Rat
8694437Bw167Body weight QTL 16722.460.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)3112250810157250810Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1581503Cm58Cardiac mass QTL 582.70.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)396509147141509147Rat
1354611Despr2Despair related QTL 23.030.0028locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)3117537367162537367Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3125116475170116475Rat
631649Bp123Blood pressure QTL 1233.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3110225882155225882Rat
1358204Insglur1Insulin/glucose ratio QTL 13.8blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)3136091420155634702Rat
12879848Bw181Body weght QTL 1810.015body mass (VT:0001259)body weight (CMO:0000012)390755164141509147Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3122395989167395989Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)3131036586176036586Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3137114333182114333Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31141509147Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)3131036586176036586Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)398651826167012663Rat
631665Bw8Body weight QTL 85.5body mass (VT:0001259)body weight (CMO:0000012)3125814931139636791Rat
1331758Bp207Blood pressure QTL 2072.848arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3110634702155634702Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35675975141509147Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)3116188400161188400Rat

Markers in Region
AI326138  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23117,871,506 - 117,871,774 (+)MAPPERmRatBN7.2
Rnor_6.03123,195,663 - 123,195,930NCBIRnor6.0
Rnor_5.03129,693,791 - 129,694,058UniSTSRnor5.0
RGSC_v3.43118,284,382 - 118,284,649UniSTSRGSC3.4
Celera3116,682,365 - 116,682,632UniSTS
Cytogenetic Map3q36UniSTS
RH137451  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3q36UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000030192   ⟹   ENSRNOP00000036810
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3138,324,514 - 138,335,766 (-)Ensembl
mRatBN7.2 Ensembl3117,871,424 - 117,882,680 (-)Ensembl
Rnor_6.0 Ensembl3123,195,580 - 123,206,828 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000109675   ⟹   ENSRNOP00000094012
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3138,315,282 - 138,335,766 (-)Ensembl
mRatBN7.2 Ensembl3117,861,653 - 117,882,680 (-)Ensembl
RefSeq Acc Id: NM_001106512   ⟹   NP_001099982
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83138,324,514 - 138,335,766 (-)NCBI
mRatBN7.23117,871,424 - 117,882,680 (-)NCBI
Rnor_6.03123,195,580 - 123,206,828 (-)NCBI
Rnor_5.03129,693,708 - 129,704,956 (-)NCBI
RGSC_v3.43118,284,299 - 118,295,547 (-)RGD
Celera3116,682,282 - 116,693,534 (-)RGD
Sequence:
RefSeq Acc Id: XM_039104581   ⟹   XP_038960509
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83138,315,006 - 138,336,691 (-)NCBI
mRatBN7.23117,861,916 - 117,882,337 (-)NCBI
RefSeq Acc Id: NP_001099982   ⟸   NM_001106512
- UniProtKB: A6HQA5 (UniProtKB/TrEMBL),   D3ZAS9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000036810   ⟸   ENSRNOT00000030192
RefSeq Acc Id: XP_038960509   ⟸   XM_039104581
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000094012   ⟸   ENSRNOT00000109675

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZAS9-F1-model_v2 AlphaFold D3ZAS9 1-339 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309979 AgrOrtholog
BioCyc Gene G2FUF-47845 BioCyc
Ensembl Genes ENSRNOG00000021232 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000030192 ENTREZGENE
  ENSRNOT00000030192.6 UniProtKB/TrEMBL
  ENSRNOT00000109675 ENTREZGENE
  ENSRNOT00000109675.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.10 UniProtKB/TrEMBL
InterPro DDRGK_dom-contain UniProtKB/TrEMBL
  DDRGK_domain-containing UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/TrEMBL
KEGG Report rno:296162 UniProtKB/TrEMBL
NCBI Gene 296162 ENTREZGENE
PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
  DDRGK DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
Pfam DDRGK UniProtKB/TrEMBL
PhenoGen Ddrgk1 PhenoGen
RatGTEx ENSRNOG00000021232 RatGTEx
SMART DDRGK UniProtKB/TrEMBL
Superfamily-SCOP SSF46785 UniProtKB/TrEMBL
UniProt A0A8I6AKQ6 ENTREZGENE, UniProtKB/TrEMBL
  A6HQA5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZAS9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-11-14 Ddrgk1  DDRGK domain containing 1  RGD1309979  similar to chromosome 20 open reading frame 116   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1309979  similar to chromosome 20 open reading frame 116   RGD1309979_predicted  similar to chromosome 20 open reading frame 116 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-20 RGD1309979_predicted  similar to chromosome 20 open reading frame 116 (predicted)  LOC296162_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC296162_predicted  similar to chromosome 20 open reading frame 116 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL