Aga (aspartylglucosaminidase) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Aga (aspartylglucosaminidase) Rattus norvegicus
Analyze
Symbol: Aga
Name: aspartylglucosaminidase
RGD ID: 1309646
Description: Enables N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity and identical protein binding activity. Predicted to be involved in proteolysis. Predicted to be located in endoplasmic reticulum and extracellular space. Predicted to be active in lysosome. Human ortholog(s) of this gene implicated in aspartylglucosaminuria and lysosomal storage disease. Orthologous to human AGA (aspartylglucosaminidase); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: glycosylasparaginase; LOC290923; MGC112709; n(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase; N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81645,191,215 - 45,249,537 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1645,223,339 - 45,249,551 (-)EnsemblGRCr8
mRatBN7.21638,504,661 - 38,516,607 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1638,504,663 - 38,516,606 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1643,852,185 - 43,864,091 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01647,212,763 - 47,224,669 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01642,568,414 - 42,580,309 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01641,222,225 - 41,234,169 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1641,222,238 - 41,234,095 (-)Ensemblrn6Rnor6.0
Rnor_5.01640,992,072 - 41,004,008 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41641,383,536 - 41,395,394 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1636,605,222 - 36,617,080 (-)NCBICelera
RGSC_v3.11641,383,601 - 41,395,548 (-)NCBI
Cytogenetic Map16p11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
endoplasmic reticulum  (IEA,ISO)
extracellular space  (IEA,ISO)
lysosome  (IBA,IEA,ISO)

References

References - curated
# Reference Title Reference Citation
1. Co-localization of hydrolytic enzymes with widely disparate pH optima: implications for the regulation of lysosomal pH. Butor C, etal., J Cell Sci. 1995 Jun;108 ( Pt 6):2213-9.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Aspartylglucosaminuria: cDNA encoding human aspartylglucosaminidase and the missense mutation causing the disease. Ikonen E, etal., EMBO J. 1991 Jan;10(1):51-8.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
11. Purification and characterization of rat liver glycosylasparaginase. Tollersrud OK and Aronson NN Jr, Biochem J. 1989 May 15;260(1):101-8.
Additional References at PubMed
PMID:1281977   PMID:1554372   PMID:1904874   PMID:8586423   PMID:8776587   PMID:12477932   PMID:15489334   PMID:23376485   PMID:25645918   PMID:29514215  


Genomics

Comparative Map Data
Aga
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81645,191,215 - 45,249,537 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1645,223,339 - 45,249,551 (-)EnsemblGRCr8
mRatBN7.21638,504,661 - 38,516,607 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1638,504,663 - 38,516,606 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1643,852,185 - 43,864,091 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01647,212,763 - 47,224,669 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01642,568,414 - 42,580,309 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01641,222,225 - 41,234,169 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1641,222,238 - 41,234,095 (-)Ensemblrn6Rnor6.0
Rnor_5.01640,992,072 - 41,004,008 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41641,383,536 - 41,395,394 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1636,605,222 - 36,617,080 (-)NCBICelera
RGSC_v3.11641,383,601 - 41,395,548 (-)NCBI
Cytogenetic Map16p11NCBI
AGA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384177,430,774 - 177,442,437 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4177,430,774 - 177,442,444 (-)Ensemblhg38GRCh38
GRCh374178,351,928 - 178,363,591 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364178,588,918 - 178,600,585 (-)NCBIBuild 36Build 36hg18NCBI36
Build 344178,727,072 - 178,738,740NCBI
Celera4175,679,083 - 175,690,820 (-)NCBICelera
Cytogenetic Map4q34.3NCBI
HuRef4174,102,201 - 174,113,937 (-)NCBIHuRef
CHM1_14178,328,375 - 178,340,109 (-)NCBICHM1_1
T2T-CHM13v2.04180,769,443 - 180,781,108 (-)NCBIT2T-CHM13v2.0
Aga
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39853,964,718 - 53,976,457 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl853,964,762 - 53,976,456 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38853,511,683 - 53,523,422 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl853,511,727 - 53,523,421 (+)Ensemblmm10GRCm38
MGSCv37854,597,080 - 54,608,776 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36855,010,424 - 55,022,120 (+)NCBIMGSCv36mm8
Celera856,224,973 - 56,236,712 (+)NCBICelera
Cytogenetic Map8B1.3NCBI
cM Map829.13NCBI
Aga
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540330,471,809 - 30,482,653 (+)Ensembl
ChiLan1.0NW_00495540330,471,809 - 30,482,653 (+)NCBIChiLan1.0ChiLan1.0
AGA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23175,176,804 - 175,188,178 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14175,540,655 - 175,551,997 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04169,624,480 - 169,635,810 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14181,859,116 - 181,870,473 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4181,855,136 - 181,870,473 (-)EnsemblpanPan2panpan1.1
AGA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11652,314,860 - 52,324,879 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1652,314,535 - 52,324,894 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1647,809,385 - 47,818,758 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01654,618,058 - 54,629,014 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1654,618,088 - 54,629,029 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11652,515,396 - 52,524,764 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01653,109,738 - 53,120,301 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01653,347,863 - 53,357,457 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Aga
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494327,436,705 - 27,447,598 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365167,847,356 - 7,861,966 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365167,850,995 - 7,861,883 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AGA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1539,701,310 - 39,713,496 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11539,702,900 - 39,714,566 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21545,613,331 - 45,623,930 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AGA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17123,532,215 - 123,544,658 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7123,528,800 - 123,544,623 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666037103,649,972 - 103,662,332 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aga
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247698,549,598 - 8,560,856 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247698,549,545 - 8,560,423 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Aga
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11334,444,180 - 34,455,832 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Aga
380 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:98
Count of miRNA genes:85
Interacting mature miRNAs:94
Transcripts:ENSRNOT00000000120
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549842Bp248Blood pressure QTL 2480.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1638712345387123Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)163692878281928782Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)164199206486992064Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162846870173468701Rat
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)163236104377361043Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16423421253708481Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16474422249744222Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)163188527176885271Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)164445512389455123Rat
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)164445512389455123Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16435482249354822Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)1638712345387123Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16423421249757901Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16423421266955197Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)163105803976058039Rat
1298529Arunc1Aerobic running capacity QTL 14exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)163439829479398294Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683908666195506Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338679049757901Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683908666195506Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683908666195506Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161773081872536785Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683908652786090Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)161590580260905802Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683908666195506Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16330168348301683Rat

Markers in Region
RH134567  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000000120   ⟹   ENSRNOP00000000120
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1645,237,565 - 45,249,423 (-)Ensembl
mRatBN7.2 Ensembl1638,504,665 - 38,516,595 (-)Ensembl
Rnor_6.0 Ensembl1641,222,238 - 41,234,095 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000107358   ⟹   ENSRNOP00000093756
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1645,237,565 - 45,249,551 (-)Ensembl
mRatBN7.2 Ensembl1638,504,663 - 38,516,593 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000116014   ⟹   ENSRNOP00000078440
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1645,223,339 - 45,249,423 (-)Ensembl
mRatBN7.2 Ensembl1638,504,663 - 38,516,606 (-)Ensembl
RefSeq Acc Id: NM_001031641   ⟹   NP_001026811
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81645,237,565 - 45,249,423 (-)NCBI
mRatBN7.21638,504,674 - 38,516,532 (-)NCBI
Rnor_6.01641,222,238 - 41,234,095 (-)NCBI
Rnor_5.01640,992,072 - 41,004,008 (-)NCBI
RGSC_v3.41641,383,536 - 41,395,394 (-)RGD
Celera1636,605,222 - 36,617,080 (-)RGD
Sequence:
RefSeq Acc Id: XM_006253111   ⟹   XP_006253173
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81645,237,552 - 45,249,510 (-)NCBI
mRatBN7.21638,504,661 - 38,516,607 (-)NCBI
Rnor_6.01641,222,225 - 41,234,169 (-)NCBI
Rnor_5.01640,992,072 - 41,004,008 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039094423   ⟹   XP_038950351
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81645,237,552 - 45,249,429 (-)NCBI
mRatBN7.21638,504,661 - 38,516,579 (-)NCBI
RefSeq Acc Id: XM_039094424   ⟹   XP_038950352
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81645,237,552 - 45,249,418 (-)NCBI
mRatBN7.21638,504,661 - 38,516,535 (-)NCBI
RefSeq Acc Id: XM_063275263   ⟹   XP_063131333
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81645,220,858 - 45,249,537 (-)NCBI
RefSeq Acc Id: XR_010058288
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81645,191,215 - 45,249,537 (-)NCBI
RefSeq Acc Id: NP_001026811   ⟸   NM_001031641
- Peptide Label: precursor
- UniProtKB: Q4G065 (UniProtKB/Swiss-Prot),   P30919 (UniProtKB/Swiss-Prot),   A6JPI4 (UniProtKB/TrEMBL),   A0A8I5ZKU5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006253173   ⟸   XM_006253111
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AL08 (UniProtKB/TrEMBL),   A0A8I5ZKU5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000000120   ⟸   ENSRNOT00000000120
RefSeq Acc Id: XP_038950351   ⟸   XM_039094423
- Peptide Label: isoform X3
- UniProtKB: A6JPI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950352   ⟸   XM_039094424
- Peptide Label: isoform X3
- UniProtKB: A6JPI5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000093756   ⟸   ENSRNOT00000107358
Ensembl Acc Id: ENSRNOP00000078440   ⟸   ENSRNOT00000116014
RefSeq Acc Id: XP_063131333   ⟸   XM_063275263
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P30919-F1-model_v2 AlphaFold P30919 1-345 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700085
Promoter ID:EPDNEW_R10609
Type:multiple initiation site
Name:Aga_1
Description:aspartylglucosaminidase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01641,234,103 - 41,234,163EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309646 AgrOrtholog
BioCyc Gene G2FUF-11453 BioCyc
BioCyc Pathway ASPARAGINE-DEG1-PWY-1 [L-asparagine degradation III (mammalian)] BioCyc
BioCyc Pathway Image ASPARAGINE-DEG1-PWY-1 BioCyc
Ensembl Genes ENSRNOG00000000108 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000000120 ENTREZGENE
  ENSRNOT00000000120.4 UniProtKB/Swiss-Prot
  ENSRNOT00000107358 ENTREZGENE
  ENSRNOT00000116014 ENTREZGENE
Gene3D-CATH (Glycosyl)asparaginase UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7366394 IMAGE-MGC_LOAD
InterPro Ntn_hydrolases_N UniProtKB/Swiss-Prot
  Peptidase_T2 UniProtKB/Swiss-Prot
KEGG Report rno:290923 UniProtKB/Swiss-Prot
MGC_CLONE MGC:112709 IMAGE-MGC_LOAD
NCBI Gene 290923 ENTREZGENE
PANTHER N(4)-(BETA-N-ACETYLGLUCOSAMINYL)-L-ASPARAGINASE UniProtKB/Swiss-Prot
  PTHR10188 UniProtKB/Swiss-Prot
Pfam Asparaginase_2 UniProtKB/Swiss-Prot
PhenoGen Aga PhenoGen
RatGTEx ENSRNOG00000000108 RatGTEx
Superfamily-SCOP SSF56235 UniProtKB/Swiss-Prot
UniProt A0A8I5ZKU5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AL08 ENTREZGENE, UniProtKB/TrEMBL
  A6JPI3_RAT UniProtKB/TrEMBL
  A6JPI4 ENTREZGENE, UniProtKB/TrEMBL
  A6JPI5 ENTREZGENE, UniProtKB/TrEMBL
  ASPG_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q4G065 ENTREZGENE
UniProt Secondary Q4G065 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Aga  aspartylglucosaminidase  Aga_predicted  aspartylglucosaminidase (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Aga_predicted  aspartylglucosaminidase (predicted)      Symbol and Name status set to approved 70820 APPROVED