Appl1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 16 | 2,125,234 - 2,173,457 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 2,118,503 - 2,166,741 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 2,121,255 - 2,166,692 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 16 | 2,125,142 - 2,173,305 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 16 | 3,270,829 - 3,318,993 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 16 | 2,131,417 - 2,179,844 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 16 | 2,560,103 - 2,602,035 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 2,563,520 - 2,602,103 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 2,534,851 - 2,581,754 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 2,180,613 - 2,227,905 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 16 | 2,179,191 - 2,228,173 (-) | NCBI | | | | | Celera | 16 | 2,089,133 - 2,134,528 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | p16 | NCBI | | | | |
|
APPL1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 3 | 57,227,729 - 57,273,471 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 57,227,726 - 57,278,105 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 57,261,757 - 57,307,499 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 57,236,805 - 57,282,539 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 3 | 57,227,340 - 57,273,073 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | p14.3 | NCBI | | | | | HuRef | 3 | 57,310,967 - 57,356,664 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 57,211,913 - 57,257,646 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 57,267,997 - 57,313,740 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Appl1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 14 | 26,640,943 - 26,692,567 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 14 | 26,640,945 - 26,693,189 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 14 | 26,918,986 - 26,970,611 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 14 | 26,918,988 - 26,971,232 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 14 | 27,732,174 - 27,783,737 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 14 | 25,745,872 - 25,797,435 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 14 | 23,158,676 - 23,210,368 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | A3 | NCBI | | | | | cM Map | 14 | 16.09 | NCBI | | | | |
|
Appl1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955430 | 6,986,759 - 7,018,938 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955430 | 6,986,977 - 7,018,938 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
APPL1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 2 | 57,196,344 - 57,241,732 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 57,201,137 - 57,246,504 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 57,161,299 - 57,206,672 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 58,370,424 - 58,415,258 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 58,370,430 - 58,415,258 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
APPL1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 20 | 33,123,577 - 33,166,831 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 33,130,723 - 33,166,792 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 33,051,161 - 33,094,218 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 33,395,990 - 33,439,031 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 33,402,695 - 33,439,040 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 32,845,010 - 32,887,864 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 33,203,498 - 33,246,471 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 33,374,797 - 33,418,067 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Appl1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 174,441,878 - 174,476,919 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936473 | 7,579,780 - 7,611,923 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936473 | 7,580,495 - 7,647,471 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
APPL1 (Sus scrofa - pig) |
|
APPL1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 22 | 18,546,694 - 18,591,239 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 18,546,751 - 18,589,552 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 148,278,109 - 148,324,433 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Appl1 (Heterocephalus glaber - naked mole-rat) |
|