Advanced Search (OLGA)

Gene: Myh7b (myosin heavy chain 7B) Rattus norvegicus

Analyze

Symbol:

Myh7b

Name:

myosin heavy chain 7B

RGD ID:

1307994

Description:

Predicted to enable actin filament binding activity and microfilament motor activity. Involved in regulation of CAMKK-AMPK signaling cascade; regulation of cardiac muscle cell contraction; and regulation of cytosolic calcium ion concentration. Predicted to be located in cardiac myofibril. Predicted to be part of myosin II complex. Predicted to be active in cytoplasm and myosin filament. Used to study hypertrophic cardiomyopathy. Human ortholog(s) of this gene implicated in hypertrophic cardiomyopathy. Orthologous to human MYH7B (myosin heavy chain 7B); PARTICIPATES IN myocarditis pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4-amino-2,6-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC311570; myosin, heavy chain 7B, cardiac muscle, beta; myosin, heavy polypeptide 7B, cardiac muscle, beta; myosin-7B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MYH7B (myosin heavy chain 7B)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Myh7b (myosin, heavy chain 7B, cardiac muscle, beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Myh7b (myosin heavy chain 7B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MYH7B (myosin heavy chain 7B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MYH7B (myosin heavy chain 7B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Myh7b (myosin heavy chain 7B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MYH7B (myosin heavy chain 7B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MYH7B (myosin heavy chain 7B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Myh7b (myosin heavy chain 7B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Myh7b (myosin heavy chain 7B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MYH7B (myosin heavy chain 7B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Myh7b (myosin, heavy chain 7B, cardiac muscle, beta)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	myh7bb (myosin, heavy chain 7B, cardiac muscle, beta b)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)
Danio rerio (zebrafish):	myh7ba (myosin, heavy chain 7B, cardiac muscle, beta a)	Alliance	DIOPT (Hieranoid\|OMA\|OrthoFinder\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	MYO1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	MYO1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Mhc	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Mhc	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-3	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-3	Alliance	DIOPT (InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	unc-54	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	unc-54	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	myh15	Alliance	DIOPT (Hieranoid\|InParanoid\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	myh7b	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Allele / Splice:

Myh7b^em1Blar

Genetic Models:

SD-Myh7b^em1Blar-/- ; SD-Myh7b^em1Blar+/-

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	164,537,211 - 164,582,441 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	164,558,340 - 164,582,094 (+)	Ensembl				GRCr8
mRatBN7.2	3	144,076,911 - 144,122,714 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	144,098,190 - 144,122,084 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	147,964,503 - 147,988,252 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	156,581,784 - 156,605,532 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	154,321,322 - 154,345,070 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	151,105,038 - 151,150,621 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	151,126,591 - 151,150,344 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	157,472,519 - 157,518,151 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	146,115,687 - 146,139,441 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	142,822,381 - 142,846,143 (+)	NCBI		Celera
RGSC_v3.1	3	146,013,986 - 146,045,029 (+)	NCBI
Cytogenetic Map	3	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Contracture (ISO)

Dilated Cardiomyopathy with Left Ventricular Noncompaction (ISO)

Dwarfism (ISO)

hypertrophic cardiomyopathy (IMP,ISO)

hypertrophic cardiomyopathy 1 (ISO)

left ventricular noncompaction (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

4-amino-2,6-dinitrotoluene (EXP)

6-propyl-2-thiouracil (EXP)

8-Br-cAMP (ISO)

acetamide (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

bisphenol F (ISO)

bromobenzene (EXP)

cadmium dichloride (EXP)

carbon nanotube (ISO)

chlorpyrifos (ISO)

diuron (ISO)

doxorubicin (ISO)

ethanol (ISO)

furan (EXP)

isoprenaline (ISO)

paracetamol (EXP)

rotenone (ISO)

testosterone (ISO)

tetrachloroethene (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

triclosan (ISO)

Triptolide (ISO)

triptonide (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of calcium-mediated signaling (IMP)

regulation of CAMKK-AMPK signaling cascade (IMP)

regulation of cardiac muscle cell contraction (IMP)

regulation of cytosolic calcium ion concentration (IMP)

Cellular Component

cardiac myofibril (IEA,ISO)

cytoplasm (IBA)

myosin complex (IEA)

myosin filament (IBA,IEA)

myosin II complex (IBA)

Molecular Function

actin binding (IEA)

actin filament binding (IBA,IEA)

ATP binding (IEA)

cytoskeletal motor activity (IEA)

microfilament motor activity (IBA)

nucleotide binding (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

myocarditis pathway (IEA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal myocardial fiber calcium currents (IMP)

abnormal sarcomere morphology (IMP)

cardiac fibrosis (IMP)

decreased body weight (IMP)

heart left ventricle hypertrophy (IMP)

increased cardiac muscle calcium level (IMP)

increased heart left ventricle posterior wall thickness (IMP)

increased myocardial fiber size (IMP)

thick interventricular septum (IMP)

References

References - curated

#	Reference Title	Reference Citation
1.	MYH7B variants cause hypertrophic cardiomyopathy by activating the CaMK-signaling pathway.	Chen P, etal., Sci China Life Sci. 2020 Sep;63(9):1347-1362. doi: 10.1007/s11427-019-1627-y. Epub 2020 Mar 17.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19948655	PMID:21273429	PMID:22422726	PMID:25865156	PMID:33053365

Genomics

Comparative Map Data

Myh7b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	164,537,211 - 164,582,441 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	164,558,340 - 164,582,094 (+)	Ensembl				GRCr8
mRatBN7.2	3	144,076,911 - 144,122,714 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	144,098,190 - 144,122,084 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	147,964,503 - 147,988,252 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	156,581,784 - 156,605,532 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	154,321,322 - 154,345,070 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	151,105,038 - 151,150,621 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	151,126,591 - 151,150,344 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	157,472,519 - 157,518,151 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	146,115,687 - 146,139,441 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	142,822,381 - 142,846,143 (+)	NCBI		Celera
RGSC_v3.1	3	146,013,986 - 146,045,029 (+)	NCBI
Cytogenetic Map	3	q42	NCBI

MYH7B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	34,955,868 - 35,002,437 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	34,955,810 - 35,002,437 (+)	Ensembl			hg38	GRCh38
GRCh37	20	33,543,671 - 33,590,240 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	33,026,867 - 33,053,897 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	20	33,026,866 - 33,053,897	NCBI
Celera	20	30,292,798 - 30,339,326 (+)	NCBI		Celera
Cytogenetic Map	20	q11.22	NCBI
HuRef	20	30,322,082 - 30,368,569 (+)	NCBI		HuRef
CHM1_1	20	33,444,929 - 33,491,422 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	36,676,523 - 36,723,074 (+)	NCBI		T2T-CHM13v2.0

Myh7b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	155,453,129 - 155,476,227 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	155,453,132 - 155,476,227 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	155,611,243 - 155,634,307 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	155,611,212 - 155,634,307 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	155,436,948 - 155,460,043 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	155,281,366 - 155,325,748 (+)	NCBI		MGSCv36	mm8
Celera	2	161,543,475 - 161,566,572 (+)	NCBI		Celera
Cytogenetic Map	2	H1	NCBI
cM Map	2	77.26	NCBI

Myh7b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	26,383,174 - 26,409,559 (-)	Ensembl
ChiLan1.0	NW_004955422	26,383,440 - 26,409,559 (-)	NCBI	ChiLan1.0	ChiLan1.0

MYH7B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	40,688,690 - 40,735,377 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	40,681,784 - 40,728,480 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	31,284,197 - 31,330,893 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	32,431,039 - 32,455,569 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	32,428,870 - 32,455,569 (+)	Ensembl			panPan2	panpan1.1

MYH7B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	24,000,243 - 24,041,059 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	24,019,741 - 24,041,012 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	23,646,356 - 23,687,094 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	24,692,265 - 24,733,017 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	24,694,080 - 24,733,008 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	23,997,248 - 24,020,096 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	24,074,626 - 24,115,525 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	24,513,578 - 24,554,443 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Myh7b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	172,984,284 - 173,028,094 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936561	5,721,587 - 5,744,867 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936561	5,721,353 - 5,744,623 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MYH7B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	38,362,452 - 38,386,469 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	17	38,362,158 - 38,385,680 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	43,559,521 - 43,582,601 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MYH7B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	39,258,541 - 39,304,569 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	39,287,302 - 39,305,798 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666050	87,508,599 - 87,554,376 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Myh7b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624842	4,395,859 - 4,433,985 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624842	4,395,859 - 4,442,557 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Myh7b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	134,944,726 - 134,969,017 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Myh7b
406 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	108
Count of miRNA genes:	82
Interacting mature miRNAs:	84
Transcripts:	ENSRNOT00000025859
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	141555229	186555229	Rat
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141555229	186555229	Rat
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	141555229	186555229	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	141555229	186555229	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	151075912	189428310	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	141555229	186555229	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	141555229	186555229	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161492708	189428310	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
61335	Bp20	Blood pressure QTL 20	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161799493	176036425	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1331726	Bp208	Blood pressure QTL 208	3.129		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	161799270	187311134	Rat
1582213	Insul6	Insulin level QTL 6	3.7	0.0009	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
1300173	Rf11	Renal function QTL 11	3.38		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	141508991	166376254	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	152055202	189428310	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	145335553	189428310	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
1582256	Insul9	Insulin level QTL 9	4.4	0.0016	blood insulin amount (VT:0001560)	absolute change in serum insulin level (CMO:0002038)	3	155759447	189428310	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	139299381	184299381	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	122395989	167395989	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	141508991	177728348	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	137114333	182114333	Rat
1582248	Insul7	Insulin level QTL 7	3.9	0.0041	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	151075912	189428310	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	151075912	189428310	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	141555229	186555229	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat
2293087	Iddm27	Insulin dependent diabetes mellitus QTL 27	2.68		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	160357340	167835660	Rat

Markers in Region

RH126268

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	144,122,036 - 144,122,240 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	151,150,430 - 151,150,633	NCBI	Rnor6.0
Rnor_5.0	3	157,518,237 - 157,518,440	UniSTS	Rnor5.0
RGSC_v3.4	3	146,139,527 - 146,139,730	UniSTS	RGSC3.4
Celera	3	142,846,229 - 142,846,432	UniSTS
Cytogenetic Map	3	q42	UniSTS

Genetic Models

This gene Myh7b is modified in the following models/strains:

SD-Myh7b^em1Blar-/- SD-Myh7b^em1Blar+/-

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	162	91	90	59	80	59	6	344	180	11	141	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107794	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC123188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EU241478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000025859 ⟹ ENSRNOP00000025859

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	164,558,340 - 164,582,094 (+)	Ensembl
mRatBN7.2 Ensembl	3	144,098,190 - 144,122,084 (+)	Ensembl
Rnor_6.0 Ensembl	3	151,126,591 - 151,150,344 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148538 ⟹ ENSRNOP00000106404

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	164,558,340 - 164,582,094 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000173656 ⟹ ENSRNOP00000099828

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	164,558,410 - 164,582,094 (+)	Ensembl

RefSeq Acc Id:

NM_001107794 ⟹ NP_001101264

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	164,558,340 - 164,582,094 (+)	NCBI
mRatBN7.2	3	144,098,190 - 144,121,951 (+)	NCBI
Rnor_6.0	3	151,126,591 - 151,150,344 (+)	NCBI
Rnor_5.0	3	157,472,519 - 157,518,151 (+)	NCBI
RGSC_v3.4	3	146,115,687 - 146,139,441 (+)	RGD
Celera	3	142,822,381 - 142,846,143 (+)	RGD

Sequence:

show sequence

TTGTGGGTTGGAGGATCAGACCCCAGTGTGGGTCCTGGTTCCTGAGTTTCCAGTCTTTTCCATC
TCGCAGGGCCTGCTGCCTCGGATTGTCTTGAATCGCTGTCCCGATTCTCAACACCAACACCTCT
CAACACCATGATGGATATGAATGAACTTGGAGAATCAGCCTGCTACCTCCGCCAGGGATACCAG
GAAATGATGAAGGTGCACACTGTCCCATGGGATGGCAAGAAACGGGTCTGGGTGCCTGATGAAC
AGGATGCCTATGTCGAAGCTGAGGTCAAGACTGAAGCTACTGGAGGCCGAGTCACTGTGGAGAC
CAAAGACCAGAAGGTGCTGACAGTGCGTGAAACGGAAATGCAGCCCATGAACCCACCCCGCTTC
GACTTACTGGAGGACATGGCCATGATGACGCACCTCAACGAGGCTGCAGTGCTGCACAACCTGC
GCCAGCGTTATGCTCGCTGGATGATCTACACATACTCGGGCCTCTTCTGTGTCACCATTAACCC
ATACAAATGGCTCCCGGTCTACACAGCTACTGTGGTGGCCGCCTACAAGGGCAAGCGCCGCTCG
GAGGCCCCGCCTCATATATATGCAGTGGCAGATAATGCCTACAATGACATGCTCCGCAACAGAG
AGAACCAGTCCATGCTGATCACCGGAGAGTCGGGGGCCGGTAAGACGGTTAACACCAAGCGGGT
CATTCAGTATTTTGCCATCGTCGCTGCCCTGGGAGACGGGCCGGGCAAGAAGGCACAATTTCTG
GCAACAAAAACCGGGGGCACCCTTGAGGATCAAATCATCGAGGCTAACCCTGCCATGGAGGCTT
TTGGTAACGCCAAGACTCTGAGGAACGACAACTCCTCCCGTTTTGGCAAGTTCATCCGCATCCA
CTTTGGTCCCACTGGGAAGCTGGCCTCTGCGGACATTGACAGCTATCTCCTGGAAAAGTCTCGA
GTGATCTTCCAGCTGCCCGGTGAGCGTGGTTACCATGTCTACTACCAAATCCTCTCCGGGAAGA
AGCCAGAGCTGCAGGACATGCTGCTCCTCTCCATGAACCCCTACGACTACCACTTCTGCAGTCA
GGGGGTCACCACCGTGGATAACATGAACGACGGGGAGGAGCTTATCGCCACTGATCATGCAATG
GACATCCTGGGCTTCAGCGTGGATGAGAAGTGCGCATGCTATAAGATCGTGGGCGCCCTCCTGC
ACTTTGGCAACATGAAGTTCAAACAGAAGCAGAGAGAGGAACAGGCTGAGGCAGACGGCACTGA
GAGTGCCGACAAGGCTGCCTACCTGATGGGAGTCAGCAGTGGAGACCTCCTCAAAGGTCTTCTG
CACCCCCGGGTTCGTGTGGGAAACGAGTATGTGACCAAGGGCCAGAGTGTGGAGCAGGTGGTAT
TTGCTGTGGGGGCCCTGGCCAAGGCTACCTATGACCGGTTGTTCCGATGGCTGGTATCTCGAAT
CAATCAGACCCTGGACACAAAGCTCCCCCGTCAGTTCTTCATTGGGGTCCTGGATATCGCTGGT
TTTGAGATCTTTGAGTTTAACAGCTTCGAGCAACTGTGTATCAACTTCACCAACGAGAAACTGC
AGCAGTTCTTCAACCAGCACATGTTCGTGCTGGAGCAGGAGGAGTACAAACGGGAGGGCATTGA
CTGGGTCTTCATCGACTTCGGCCTTGACCTGCAGCCCTGCATCGACCTCATCGAGAAGCCTCTG
GGCATTCTGTCCATCCTGGAGGAGGAGTGCATGTTCCCCAAGGCTTCAGACGCAAGCTTCAGGG
CCAAGCTCTATGACAATCACTCTGGGAAGTCACCTAATTTCCAGCAGCCTCGCCCAGACAAGAA
ACGCAAGTACCAGGCTCACTTCGAGGTGGTCCACTACGCAGGCGTGGTACCTTATAGCATTGTG
GGCTGGCTGGAGAAAAACAAGGACCCCCTCAATGAGACCGTGGTCCCCATCTTCCAAAAGTCAC
AGAATAGGCTCTTGGCCACCCTCTATGAGAACTATGCAGGTTCTTGCTCCACCGAGCCCCCCAA
GTCTGGGGTGAAAGAGAAACGAAAGAAAGCAGCATCATTTCAGACAGTGTCTCAGCTTCACAAG
GAGAACCTCAACAAGCTTATGACCAACCTGCGGGCCACACAGCCCCACTTCGTCCGTTGTATCG
TCCCCAACGAGAACAAGACTCCAGGGGTCATGGATTCCTTCTTGGTGCTACACCAGCTACGCTG
TAACGGGGTCCTAGAGGGGATCCGGATCTGCCGCCAAGGGTTCCCCAACAGACTGCTGTATGCT
GACTTCAGGCAGCGGTACCGAATCCTGAACCCCAGTGCCATCCCAGATGACACCTTTGTGGACA
GCAGGAAGGCCACAGAGAAGCTGCTGGGCTCTCTGGACATTGACCACACCCAGTATCAGTTTGG
CCACACCAAGGTGTTCTTCAAGGCTGGGCTTCTAGGCATCCTGGAGGAGCTCCGGGACCAGCGT
CTGGCTAAGGTGCTGACACTGCTGCAGGCTCGGAGCCGGGGCCGCCTCATGCGTCTGGAGTACC
AGCGCATGCTAGGAGGAAGGGATGCCCTGTTCACCATCCAGTGGAACATCCGGGCCTTCAATGC
CGTCAAGAACTGGTCCTGGATGAAGCTCTTCTTCAAGATGAAGCCACTGCTGCGCTCAGCACAG
GCAGAGGAAGAGCTGGCAGCACTTCGGGCAGAACTGCGGGGGCTGCGGGGGGCCCTGGCTACGG
CTGAGGCCAAGCGTCAGGAGCTGGAGGAGACTCAAGTCAGTGTCACTCAGGAGAAGAATGACCT
GGCCCTGCAGCTGCAGGCAGAGCAGGACAACCTAGCGGATGCGGAGGAGCGCTGCCACTTGCTC
ATCAAGTCCAAGGTGCAGCTCGAGGCGAAGGTGAAGGAGCTGAACGAGCGGCTGGAGGATGAGG
AGGAAGTGAACGCTGACCTGGCCGCACGCAGGCGCAAGCTGGAGGATGAGTGCACGGAGCTCAA
GAAGGACATTGATGACCTGGAGCTGACCCTGGCCAAGGCTGAGAAGGAGAAACAAGCCACCGAG
AATAAGGTGAAGAACCTGACAGAGGAGATGGCTGCCCTGGACGAGTCCGTGGTCCGCCTGACTA
AGGAGAAGAAGGCGTTGCAGGAGGCTCACCAGCAGGCTCTGGGTGACCTGCAGGCTGAAGAGGA
CCGTGTGAGTGCGCTGGCCAAGGCCAAGATCCGGTTGGAGCAGCAAGTAGAGGACCTGGAGTGC
TCCCTGGAGCAAGAGAAGAAGCTTCGCATGGATACAGAACGTGCCAAGCGCAAGCTCGAAGGAG
ACCTGAAGCTGACGCAGGAGACAGTGACAGACACCACACAAGACAAGCAGCAGCTGGAGGAGAA
GTTGAAGAAGAAGGATTCAGAGCTGAGTCAGCTGAGCCTGCGGGTGGAGGATGAGCAGCTCCTG
GGGGCGCAGTTGCAGAAGAAGATCAAGGAGCTACAGGCGAGGGCTGAGGAGCTGGAGGAGGAGC
TGGAGGCGGAGCGAGCAGCCCGTGCCCGTGTGGAAAAGCAGCGAGCTGAGGCAGCCCGAGAGCT
GGAGGAGCTGAGTGAGAGGCTAGAGGAGGCTGGTGGAGCCTCTGCCGGGCAGCGTGAGGGTTGC
CGCAAGCGTGAGGCTGAGTTGGGCCGACTGCGGCGGGAGCTGGAGGAGACAGTTCTGAGACACG
AGGCCACTGTGGCTGCCCTGCGCCGCAAGCAGGCTGATAGCGCCGCAGAGTTGAGCGAGCAGGT
AGACAGCCTCCAGCGGATCCGGCAGAAACTGGAGAAGGAAAAGAGTGAGCTGCGCATGGAGGTG
GATGATCTGGGGGCCAGCGTGGAAACTCTGGCCCGTGGCAAGGCCAGTGCAGAGAAGCTGTGCC
GGACCTATGAGGACCAGCTCAGCGAGGCCAAGATCAAAGTGGAGGAGCTGCAGCGGCAGCTGAC
TGACGCCAGCACCCAGCGGGGGCGGTTACAAACGGAGAACGGGGAGCTGGGCCGCCTGCTTGAG
GAGAAGGAGTCTATGATCAGCCAGCTGAGCCGCGGGAAGACCTCAGCCGCTCAGAGTCTGGAGG
AACTTCGGCGGCAGTTGGAGGAAGAAAGCAAGGCCAAGGGTGCGCTGGCTCACGCAGTGCAGGC
TCTGCGGCACGACTGCGACCTCCTGCGAGAGCAGCATGAGGAAGAGTCCGAGGCGCAGGCTGAG
CTGCAGCGGCTGCTGTCCAAAGCCAACGCTGAGGTGGCACAGTGGAGGAGCAAGTATGAGGCGG
ACGCCATCCAAAGGACGGAGGAGCTGGAGGAGGCCAAGAAGAAGCTGGCCCTGAGGCTGCAGGA
GGCAGAAGAAGGCGTAGAGGCTGCGAATGCCAAGTGCTCCTCACTGGAGAAGGCCAAGCTGCGG
CTGCAGACAGAGTCCGAGGACGTGACCTTGGAGCTGGAGCGGGCCACCTCAGCCGCTGCTGCAC
TGGATAAGAAGCAGCGGCACTTGGAGCGGGCCCTGGAGGAACGGAGGCGGCAGGAGGAGGAGAT
GCAGCGGGAACTGGAGGCGGCGCAGAGGGAGGCTCGAGGTCTGGGCACCGAGCTCTTTCGATTG
CGGCACAGCCATGAGGAGGCGCTTGAGGCTCTGGAGACACTCAAGCGGGAGAACAAGAATCTGC
AGGAGGAGATCAGCGACCTTACAGACCAGGTCAGCCTCAGCGGGAAGAGCATCCAGGAACTGGA
GAAGGCCAAGAAGGCGCTGGAAGGGGAGAAGAGTGAGCTGCAGGCTGCGCTGGAGGAGGCTGAG
GGGGCGCTGGAGCTGGAAGAGACAAAGACCCTGCGGATCCAGTTGGAGTTGTCCCAGGTCAAGG
CGGAAGTGGACCGAAAGCTGGCGGAGAAGGATGAGGAGTGTACTAACCTGAGGCGCAACCACCA
GCGGGCTGTGGAGTCCTTGCAGGCCTCCCTGGATGCCGAGACTAGGGCCCGCAATGAAGCACTG
CGTCTCAAGAAGAAGATGGAGGGGGACCTCAATGACCTGGAGTTACAGCTGGGCCACGCAACCC
GCCAGGCCATGGAGGCACAGGCAGCCACGAGGCTGCTTCAGGCCCAACTCAAGGAGGAGCAAGC
AGGGCGTGATGAGGAGCAGAGGCTGGCTGCCGAGCTCCGCGAGCAGGGCCAGGCCCTCGAGCGC
AGGGCTGCACTGCTGGCATCTGAGCTGGAAGAGCTTCGGGCCGCCCTGGAACAGGGCGAGCGCA
GCCGAAGGCTGGCTGAACAGGAGCTGTTGGAGGCCACAGAGCGCCTCAACCTACTGCATTCACA
GAACACAGGCCTCCTGAACCAGAAAAAGAAGCTGGAGGTGGACTTGGCCCAGCTGAGTGGGGAG
GTGGAGGAGGCTGCGCAGGAGAGGCGGGAAGCTGAGGAGAAGGCCAAAAAGGCCATCACGGATG
CAGCCATGATGGCTGAGGAGCTGAAAAAGGAGCAGGACACAAGTGCACACCTCGAACGGATGAA
GAAGACCCTGGAACAGACAGTGCGGGAGCTGCAGGCCCGCCTTGAGGAAGCAGAGCAGGCCGCA
CTCCGGGGTGGGAAGAAGCAAGTGCAGAAGCTGGAAGCCAAGGTGCGGGAACTGGAGGCAGAGC
TTGACGCAGAGCAGAAGAAGCACGCTGAGGCCCTCAAGGGTGTGCGCAAACATGAGCGCAGGGT
CAAGGAGCTTGCGTACCAGACTGAGGAAGACAGGAAGAACCTGGCTCGCATGCAGGACCTAGTG
GACAAGCTGCAGAGCAAGGTCAAGAGCTACAAGCGTCAGTTTGAGGAGGCGGAGCAGCAGGCCA
GTACCAACCTGGCTAAGTACCGCAAGGCCCAGCACGAGTTAGACGACGCTGAGGAGCGGGCAGA
CATGGCAGAGACCCAGGCCAACAAGCTGCGGGCAAGGTCCAGGGATGCCCTGGGTCCCAAGCAC
AAGGAGTGAGAGACTCCAGCTCTGACGAGGGATACCCCGTGCTCCTGTTGTCTTTCCACCTGCC
ACTCCACAGAGCTCTGGAACCCCAAATAAACACCACATCTGCAGCAGCAGCCGCTGTCCTGTCC
TTATTTCTTGCGGCTAG

hide sequence

RefSeq Acc Id:

XM_017591783 ⟹ XP_017447272

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	164,538,316 - 164,582,441 (+)	NCBI
mRatBN7.2	3	144,078,198 - 144,122,028 (+)	NCBI
Rnor_6.0	3	151,106,629 - 151,150,309 (+)	NCBI

Sequence:

show sequence

GGCTAAAAAAAAAAAAAAAGAGGGTGGGGAAGGAGCCCCGCGTCTATAGAACTGGACGGCAGCC
GGGAAGGGTCATTACGTGAAAAGGGCCTGCTGCCTCGGATTGTCTTGAATCGCTGTCCCGATTC
TCAACACCAACACCTCTCAACACCATGATGGATATGAATGAACTTGGAGAATCAGCCTGCTACC
TCCGCCAGGGATACCAGGAAATGATGAAGGTGCACACTGTCCCATGGGATGGCAAGAAACGGGT
CTGGGTGCCTGATGAACAGGATGCCTATGTCGAAGCTGAGGTCAAGACTGAAGCTACTGGAGGC
CGAGTCACTGTGGAGACCAAAGACCAGAAGGTGCTGACAGTGCGTGAAACGGAAATGCAGCCCA
TGAACCCACCCCGCTTCGACTTACTGGAGGACATGGCCATGATGACGCACCTCAACGAGGCTGC
AGTGCTGCACAACCTGCGCCAGCGTTATGCTCGCTGGATGATCTACACATACTCGGGCCTCTTC
TGTGTCACCATTAACCCATACAAATGGCTCCCGGTCTACACAGCTACTGTGGTGGCCGCCTACA
AGGGCAAGCGCCGCTCGGAGGCCCCGCCTCATATATATGCAGTGGCAGATAATGCCTACAATGA
CATGCTCCGCAACAGAGAGAACCAGTCCATGCTGATCACCGGAGAGTCGGGGGCCGGTAAGACG
GTTAACACCAAGCGGGTCATTCAGTATTTTGCCATCGTCGCTGCCCTGGGAGACGGGCCGGGCA
AGAAGGCACAATTTCTGGCAACAAAAACCGGGGGCACCCTTGAGGATCAAATCATCGAGGCTAA
CCCTGCCATGGAGGCTTTTGGTAACGCCAAGACTCTGAGGAACGACAACTCCTCCCGTTTTGGC
AAGTTCATCCGCATCCACTTTGGTCCCACTGGGAAGCTGGCCTCTGCGGACATTGACAGCTATC
TCCTGGAAAAGTCTCGAGTGATCTTCCAGCTGCCCGGTGAGCGTGGTTACCATGTCTACTACCA
AATCCTCTCCGGGAAGAAGCCAGAGCTGCAGGACATGCTGCTCCTCTCCATGAACCCCTACGAC
TACCACTTCTGCAGTCAGGGGGTCACCACCGTGGATAACATGAACGACGGGGAGGAGCTTATCG
CCACTGATCATGCAATGGACATCCTGGGCTTCAGCGTGGATGAGAAGTGCGCATGCTATAAGAT
CGTGGGCGCCCTCCTGCACTTTGGCAACATGAAGTTCAAACAGAAGCAGAGAGAGGAACAGGCT
GAGGCAGACGGCACTGAGAGTGCCGACAAGGCTGCCTACCTGATGGGAGTCAGCAGTGGAGACC
TCCTCAAAGGTCTTCTGCACCCCCGGGTTCGTGTGGGAAACGAGTATGTGACCAAGGGCCAGAG
TGTGGAGCAGGTGGTATTTGCTGTGGGGGCCCTGGCCAAGGCTACCTATGACCGGTTGTTCCGA
TGGCTGGTATCTCGAATCAATCAGACCCTGGACACAAAGCTCCCCCGTCAGTTCTTCATTGGGG
TCCTGGATATCGCTGGTTTTGAGATCTTTGAGTTTAACAGCTTCGAGCAACTGTGTATCAACTT
CACCAACGAGAAACTGCAGCAGTTCTTCAACCAGCACATGTTCGTGCTGGAGCAGGAGGAGTAC
AAACGGGAGGGCATTGACTGGGTCTTCATCGACTTCGGCCTTGACCTGCAGCCCTGCATCGACC
TCATCGAGAAGCCTCTGGGCATTCTGTCCATCCTGGAGGAGGAGTGCATGTTCCCCAAGGCTTC
AGACGCAAGCTTCAGGGCCAAGCTCTATGACAATCACTCTGGGAAGTCACCTAATTTCCAGCAG
CCTCGCCCAGACAAGAAACGCAAGTACCAGGCTCACTTCGAGGTGGTCCACTACGCAGGCGTGG
TACCTTATAGCATTGTGGGCTGGCTGGAGAAAAACAAGGACCCCCTCAATGAGACCGTGGTCCC
CATCTTCCAAAAGTCACAGAATAGGCTCTTGGCCACCCTCTATGAGAACTATGCAGGTTCTTGC
TCCACCGAGCCCCCCAAGTCTGGGGTGAAAGAGAAACGAAAGAAAGCAGCATCATTTCAGACAG
TGTCTCAGCTTCACAAGGAGAACCTCAACAAGCTTATGACCAACCTGCGGGCCACACAGCCCCA
CTTCGTCCGTTGTATCGTCCCCAACGAGAACAAGACTCCAGGGGTCATGGATTCCTTCTTGGTG
CTACACCAGCTACGCTGTAACGGGGTCCTAGAGGGGATCCGGATCTGCCGCCAAGGGTTCCCCA
ACAGACTGCTGTATGCTGACTTCAGGCAGCGGTACCGAATCCTGAACCCCAGTGCCATCCCAGA
TGACACCTTTGTGGACAGCAGGAAGGCCACAGAGAAGCTGCTGGGCTCTCTGGACATTGACCAC
ACCCAGTATCAGTTTGGCCACACCAAGGTGTTCTTCAAGGCTGGGCTTCTAGGCATCCTGGAGG
AGCTCCGGGACCAGCGTCTGGCTAAGGTGCTGACACTGCTGCAGGCTCGGAGCCGGGGCCGCCT
CATGCGTCTGGAGTACCAGCGCATGCTAGGAGGAAGGGATGCCCTGTTCACCATCCAGTGGAAC
ATCCGGGCCTTCAATGCCGTCAAGAACTGGTCCTGGATGAAGCTCTTCTTCAAGATGAAGCCAC
TGCTGCGCTCAGCACAGGCAGAGGAAGAGCTGGCAGCACTTCGGGCAGAACTGCGGGGGCTGCG
GGGGGCCCTGGCTACGGCTGAGGCCAAGCGTCAGGAGCTGGAGGAGACTCAAGTCAGTGTCACT
CAGGAGAAGAATGACCTGGCCCTGCAGCTGCAGGCAGAGCAGGACAACCTAGCGGATGCGGAGG
AGCGCTGCCACTTGCTCATCAAGTCCAAGGTGCAGCTCGAGGCGAAGGTGAAGGAGCTGAACGA
GCGGCTGGAGGATGAGGAGGAAGTGAACGCTGACCTGGCCGCACGCAGGCGCAAGCTGGAGGAT
GAGTGCACGGAGCTCAAGAAGGACATTGATGACCTGGAGCTGACCCTGGCCAAGGCTGAGAAGG
AGAAACAAGCCACCGAGAATAAGGTGAAGAACCTGACAGAGGAGATGGCTGCCCTGGACGAGTC
CGTGGTCCGCCTGACTAAGGAGAAGAAGGCGTTGCAGGAGGCTCACCAGCAGGCTCTGGGTGAC
CTGCAGGCTGAAGAGGACCGTGTGAGTGCGCTGGCCAAGGCCAAGATCCGGTTGGAGCAGCAAG
TAGAGGACCTGGAGTGCTCCCTGGAGCAAGAGAAGAAGCTTCGCATGGATACAGAACGTGCCAA
GCGCAAGCTCGAAGGAGACCTGAAGCTGACGCAGGAGACAGTGACAGACACCACACAAGACAAG
CAGCAGCTGGAGGAGAAGTTGAAGAAGAAGGATTCAGAGCTGAGTCAGCTGAGCCTGCGGGTGG
AGGATGAGCAGCTCCTGGGGGCGCAGTTGCAGAAGAAGATCAAGGAGCTACAGGCGAGGGCTGA
GGAGCTGGAGGAGGAGCTGGAGGCGGAGCGAGCAGCCCGTGCCCGTGTGGAAAAGCAGCGAGCT
GAGGCAGCCCGAGAGCTGGAGGAGCTGAGTGAGAGGCTAGAGGAGGCTGGTGGAGCCTCTGCCG
GGCAGCGTGAGGGTTGCCGCAAGCGTGAGGCTGAGTTGGGCCGACTGCGGCGGGAGCTGGAGGA
GACAGTTCTGAGACACGAGGCCACTGTGGCTGCCCTGCGCCGCAAGCAGGCTGATAGCGCCGCA
GAGTTGAGCGAGCAGGTAGACAGCCTCCAGCGGATCCGGCAGAAACTGGAGAAGGAAAAGAGTG
AGCTGCGCATGGAGGTGGATGATCTGGGGGCCAGCGTGGAAACTCTGGCCCGTGGCAAGGCCAG
TGCAGAGAAGCTGTGCCGGACCTATGAGGACCAGCTCAGCGAGGCCAAGATCAAAGTGGAGGAG
CTGCAGCGGCAGCTGACTGACGCCAGCACCCAGCGGGGGCGGTTACAAACGGAGAACGGGGAGC
TGGGCCGCCTGCTTGAGGAGAAGGAGTCTATGATCAGCCAGCTGAGCCGCGGGAAGACCTCAGC
CGCTCAGAGTCTGGAGGAACTTCGGCGGCAGTTGGAGGAAGAAAGCAAGGCCAAGGGTGCGCTG
GCTCACGCAGTGCAGGCTCTGCGGCACGACTGCGACCTCCTGCGAGAGCAGCATGAGGAAGAGT
CCGAGGCGCAGGCTGAGCTGCAGCGGCTGCTGTCCAAAGCCAACGCTGAGGTGGCACAGTGGAG
GAGCAAGTATGAGGCGGACGCCATCCAAAGGACGGAGGAGCTGGAGGAGGCCAAGAAGAAGCTG
GCCCTGAGGCTGCAGGAGGCAGAAGAAGGCGTAGAGGCTGCGAATGCCAAGTGCTCCTCACTGG
AGAAGGCCAAGCTGCGGCTGCAGACAGAGTCCGAGGACGTGACCTTGGAGCTGGAGCGGGCCAC
CTCAGCCGCTGCTGCACTGGATAAGAAGCAGCGGCACTTGGAGCGGGCCCTGGAGGAACGGAGG
CGGCAGGAGGAGGAGATGCAGCGGGAACTGGAGGCGGCGCAGAGGGAGGCTCGAGGTCTGGGCA
CCGAGCTCTTTCGATTGCGGCACAGCCATGAGGAGGCGCTTGAGGCTCTGGAGACACTCAAGCG
GGAGAACAAGAATCTGCAGGAGGAGATCAGCGACCTTACAGACCAGGTCAGCCTCAGCGGGAAG
AGCATCCAGGAACTGGAGAAGGCCAAGAAGGCGCTGGAAGGGGAGAAGAGTGAGCTGCAGGCTG
CGCTGGAGGAGGCTGAGGGGGCGCTGGAGCTGGAAGAGACAAAGACCCTGCGGATCCAGTTGGA
GTTGTCCCAGGTCAAGGCGGAAGTGGACCGAAAGCTGGCGGAGAAGGATGAGGAGTGTACTAAC
CTGAGGCGCAACCACCAGCGGGCTGTGGAGTCCTTGCAGGCCTCCCTGGATGCCGAGACTAGGG
CCCGCAATGAAGCACTGCGTCTCAAGAAGAAGATGGAGGGGGACCTCAATGACCTGGAGTTACA
GCTGGGCCACGCAACCCGCCAGGCCATGGAGGCACAGGCAGCCACGAGGCTGCTTCAGGCCCAA
CTCAAGGAGGAGCAAGCAGGGCGTGATGAGGAGCAGAGGCTGGCTGCCGAGCTCCGCGAGCAGG
GCCAGGCCCTCGAGCGCAGGGCTGCACTGCTGGCATCTGAGCTGGAAGAGCTTCGGGCCGCCCT
GGAACAGGGCGAGCGCAGCCGAAGGCTGGCTGAACAGGAGCTGTTGGAGGCCACAGAGCGCCTC
AACCTACTGCATTCACAGAACACAGGCCTCCTGAACCAGAAAAAGAAGCTGGAGGTGGACTTGG
CCCAGCTGAGTGGGGAGGTGGAGGAGGCTGCGCAGGAGAGGCGGGAAGCTGAGGAGAAGGCCAA
AAAGGCCATCACGGATGCAGCCATGATGGCTGAGGAGCTGAAAAAGGAGCAGGACACAAGTGCA
CACCTCGAACGGATGAAGAAGACCCTGGAACAGACAGTGCGGGAGCTGCAGGCCCGCCTTGAGG
AAGCAGAGCAGGCCGCACTCCGGGGTGGGAAGAAGCAAGTGCAGAAGCTGGAAGCCAAGGTGCG
GGAACTGGAGGCAGAGCTTGACGCAGAGCAGAAGAAGCACGCTGAGGCCCTCAAGGGTGTGCGC
AAACATGAGCGCAGGGTCAAGGAGCTTGCGTACCAGACTGAGGAAGACAGGAAGAACCTGGCTC
GCATGCAGGACCTAGTGGACAAGCTGCAGAGCAAGGTCAAGAGCTACAAGCGTCAGTTTGAGGA
GGCGGAGCAGCAGGCCAGTACCAACCTGGCTAAGTACCGCAAGGCCCAGCACGAGTTAGACGAC
GCTGAGGAGCGGGCAGACATGGCAGAGACCCAGGCCAACAAGCTGCGGGCAAGGTCCAGGGATG
CCCTGGGTCCCAAGCACAAGGAGTGAGAGACTCCAGCTCTGACGAGGGATACCCCGTGCTCCTG
TTGTCTTTCCACCTGCCACTCCACAGAGCTCTGGAACCCCAAATAAACACCACATCTGCAGCA

hide sequence

RefSeq Acc Id:

XM_039105078 ⟹ XP_038961006

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	164,537,211 - 164,582,441 (+)	NCBI
mRatBN7.2	3	144,076,911 - 144,122,028 (+)	NCBI

RefSeq Acc Id:

XM_039105079 ⟹ XP_038961007

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	164,538,313 - 164,582,441 (+)	NCBI
mRatBN7.2	3	144,078,198 - 144,122,714 (+)	NCBI

RefSeq Acc Id:

XM_039105080 ⟹ XP_038961008

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	164,560,981 - 164,582,441 (+)	NCBI
mRatBN7.2	3	144,100,835 - 144,122,028 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101264	(Get FASTA)	NCBI Sequence Viewer
	XP_017447272	(Get FASTA)	NCBI Sequence Viewer
	XP_038961006	(Get FASTA)	NCBI Sequence Viewer
	XP_038961007	(Get FASTA)	NCBI Sequence Viewer
	XP_038961008	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ABY74500	(Get FASTA)	NCBI Sequence Viewer
	EDL85905	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000025859.6
	ENSRNOP00000099828.1
	ENSRNOP00000106404
	ENSRNOP00000106404.1

RefSeq Acc Id:

NP_001101264 ⟸ NM_001107794

- UniProtKB:

B6RK61 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MMDMNELGESACYLRQGYQEMMKVHTVPWDGKKRVWVPDEQDAYVEAEVKTEATGGRVTVETKD
QKVLTVRETEMQPMNPPRFDLLEDMAMMTHLNEAAVLHNLRQRYARWMIYTYSGLFCVTINPYK
WLPVYTATVVAAYKGKRRSEAPPHIYAVADNAYNDMLRNRENQSMLITGESGAGKTVNTKRVIQ
YFAIVAALGDGPGKKAQFLATKTGGTLEDQIIEANPAMEAFGNAKTLRNDNSSRFGKFIRIHFG
PTGKLASADIDSYLLEKSRVIFQLPGERGYHVYYQILSGKKPELQDMLLLSMNPYDYHFCSQGV
TTVDNMNDGEELIATDHAMDILGFSVDEKCACYKIVGALLHFGNMKFKQKQREEQAEADGTESA
DKAAYLMGVSSGDLLKGLLHPRVRVGNEYVTKGQSVEQVVFAVGALAKATYDRLFRWLVSRINQ
TLDTKLPRQFFIGVLDIAGFEIFEFNSFEQLCINFTNEKLQQFFNQHMFVLEQEEYKREGIDWV
FIDFGLDLQPCIDLIEKPLGILSILEEECMFPKASDASFRAKLYDNHSGKSPNFQQPRPDKKRK
YQAHFEVVHYAGVVPYSIVGWLEKNKDPLNETVVPIFQKSQNRLLATLYENYAGSCSTEPPKSG
VKEKRKKAASFQTVSQLHKENLNKLMTNLRATQPHFVRCIVPNENKTPGVMDSFLVLHQLRCNG
VLEGIRICRQGFPNRLLYADFRQRYRILNPSAIPDDTFVDSRKATEKLLGSLDIDHTQYQFGHT
KVFFKAGLLGILEELRDQRLAKVLTLLQARSRGRLMRLEYQRMLGGRDALFTIQWNIRAFNAVK
NWSWMKLFFKMKPLLRSAQAEEELAALRAELRGLRGALATAEAKRQELEETQVSVTQEKNDLAL
QLQAEQDNLADAEERCHLLIKSKVQLEAKVKELNERLEDEEEVNADLAARRRKLEDECTELKKD
IDDLELTLAKAEKEKQATENKVKNLTEEMAALDESVVRLTKEKKALQEAHQQALGDLQAEEDRV
SALAKAKIRLEQQVEDLECSLEQEKKLRMDTERAKRKLEGDLKLTQETVTDTTQDKQQLEEKLK
KKDSELSQLSLRVEDEQLLGAQLQKKIKELQARAEELEEELEAERAARARVEKQRAEAARELEE
LSERLEEAGGASAGQREGCRKREAELGRLRRELEETVLRHEATVAALRRKQADSAAELSEQVDS
LQRIRQKLEKEKSELRMEVDDLGASVETLARGKASAEKLCRTYEDQLSEAKIKVEELQRQLTDA
STQRGRLQTENGELGRLLEEKESMISQLSRGKTSAAQSLEELRRQLEEESKAKGALAHAVQALR
HDCDLLREQHEEESEAQAELQRLLSKANAEVAQWRSKYEADAIQRTEELEEAKKKLALRLQEAE
EGVEAANAKCSSLEKAKLRLQTESEDVTLELERATSAAAALDKKQRHLERALEERRRQEEEMQR
ELEAAQREARGLGTELFRLRHSHEEALEALETLKRENKNLQEEISDLTDQVSLSGKSIQELEKA
KKALEGEKSELQAALEEAEGALELEETKTLRIQLELSQVKAEVDRKLAEKDEECTNLRRNHQRA
VESLQASLDAETRARNEALRLKKKMEGDLNDLELQLGHATRQAMEAQAATRLLQAQLKEEQAGR
DEEQRLAAELREQGQALERRAALLASELEELRAALEQGERSRRLAEQELLEATERLNLLHSQNT
GLLNQKKKLEVDLAQLSGEVEEAAQERREAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKT
LEQTVRELQARLEEAEQAALRGGKKQVQKLEAKVRELEAELDAEQKKHAEALKGVRKHERRVKE
LAYQTEEDRKNLARMQDLVDKLQSKVKSYKRQFEEAEQQASTNLAKYRKAQHELDDAEERADMA
ETQANKLRARSRDALGPKHKE

hide sequence

RefSeq Acc Id:	XP_017447272 ⟸ XM_017591783
- Peptide Label:	isoform X1
- UniProtKB:	B6RK61 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMDMNELGESACYLRQGYQEMMKVHTVPWDGKKRVWVPDEQDAYVEAEVKTEATGGRVTVETKD QKVLTVRETEMQPMNPPRFDLLEDMAMMTHLNEAAVLHNLRQRYARWMIYTYSGLFCVTINPYK WLPVYTATVVAAYKGKRRSEAPPHIYAVADNAYNDMLRNRENQSMLITGESGAGKTVNTKRVIQ YFAIVAALGDGPGKKAQFLATKTGGTLEDQIIEANPAMEAFGNAKTLRNDNSSRFGKFIRIHFG PTGKLASADIDSYLLEKSRVIFQLPGERGYHVYYQILSGKKPELQDMLLLSMNPYDYHFCSQGV TTVDNMNDGEELIATDHAMDILGFSVDEKCACYKIVGALLHFGNMKFKQKQREEQAEADGTESA DKAAYLMGVSSGDLLKGLLHPRVRVGNEYVTKGQSVEQVVFAVGALAKATYDRLFRWLVSRINQ TLDTKLPRQFFIGVLDIAGFEIFEFNSFEQLCINFTNEKLQQFFNQHMFVLEQEEYKREGIDWV FIDFGLDLQPCIDLIEKPLGILSILEEECMFPKASDASFRAKLYDNHSGKSPNFQQPRPDKKRK YQAHFEVVHYAGVVPYSIVGWLEKNKDPLNETVVPIFQKSQNRLLATLYENYAGSCSTEPPKSG VKEKRKKAASFQTVSQLHKENLNKLMTNLRATQPHFVRCIVPNENKTPGVMDSFLVLHQLRCNG VLEGIRICRQGFPNRLLYADFRQRYRILNPSAIPDDTFVDSRKATEKLLGSLDIDHTQYQFGHT KVFFKAGLLGILEELRDQRLAKVLTLLQARSRGRLMRLEYQRMLGGRDALFTIQWNIRAFNAVK NWSWMKLFFKMKPLLRSAQAEEELAALRAELRGLRGALATAEAKRQELEETQVSVTQEKNDLAL QLQAEQDNLADAEERCHLLIKSKVQLEAKVKELNERLEDEEEVNADLAARRRKLEDECTELKKD IDDLELTLAKAEKEKQATENKVKNLTEEMAALDESVVRLTKEKKALQEAHQQALGDLQAEEDRV SALAKAKIRLEQQVEDLECSLEQEKKLRMDTERAKRKLEGDLKLTQETVTDTTQDKQQLEEKLK KKDSELSQLSLRVEDEQLLGAQLQKKIKELQARAEELEEELEAERAARARVEKQRAEAARELEE LSERLEEAGGASAGQREGCRKREAELGRLRRELEETVLRHEATVAALRRKQADSAAELSEQVDS LQRIRQKLEKEKSELRMEVDDLGASVETLARGKASAEKLCRTYEDQLSEAKIKVEELQRQLTDA STQRGRLQTENGELGRLLEEKESMISQLSRGKTSAAQSLEELRRQLEEESKAKGALAHAVQALR HDCDLLREQHEEESEAQAELQRLLSKANAEVAQWRSKYEADAIQRTEELEEAKKKLALRLQEAE EGVEAANAKCSSLEKAKLRLQTESEDVTLELERATSAAAALDKKQRHLERALEERRRQEEEMQR ELEAAQREARGLGTELFRLRHSHEEALEALETLKRENKNLQEEISDLTDQVSLSGKSIQELEKA KKALEGEKSELQAALEEAEGALELEETKTLRIQLELSQVKAEVDRKLAEKDEECTNLRRNHQRA VESLQASLDAETRARNEALRLKKKMEGDLNDLELQLGHATRQAMEAQAATRLLQAQLKEEQAGR DEEQRLAAELREQGQALERRAALLASELEELRAALEQGERSRRLAEQELLEATERLNLLHSQNT GLLNQKKKLEVDLAQLSGEVEEAAQERREAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKT LEQTVRELQARLEEAEQAALRGGKKQVQKLEAKVRELEAELDAEQKKHAEALKGVRKHERRVKE LAYQTEEDRKNLARMQDLVDKLQSKVKSYKRQFEEAEQQASTNLAKYRKAQHELDDAEERADMA ETQANKLRARSRDALGPKHKE hide sequence

Ensembl Acc Id:

ENSRNOP00000025859 ⟸ ENSRNOT00000025859

RefSeq Acc Id:	XP_038961006 ⟸ XM_039105078
- Peptide Label:	isoform X1
- UniProtKB:	B6RK61 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961007 ⟸ XM_039105079
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038961008 ⟸ XM_039105080
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSRNOP00000099828 ⟸ ENSRNOT00000173656

Ensembl Acc Id:

ENSRNOP00000106404 ⟸ ENSRNOT00000148538

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B6RK61-F1-model_v2	AlphaFold	B6RK61	1-1941	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307994	AgrOrtholog
BioCyc Gene	G2FUF-47126	BioCyc
Ensembl Genes	ENSRNOG00000018997	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000025859.6	UniProtKB/TrEMBL
	ENSRNOT00000148538	ENTREZGENE
	ENSRNOT00000148538.1	UniProtKB/TrEMBL
	ENSRNOT00000173656.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.10.820	UniProtKB/TrEMBL
	1.20.5.340	UniProtKB/TrEMBL
	1.20.5.370	UniProtKB/TrEMBL
	1.20.5.4820	UniProtKB/TrEMBL
	1.20.58.530	UniProtKB/TrEMBL
	2.30.30.360	UniProtKB/TrEMBL
	3.40.850.10	UniProtKB/TrEMBL
	6.10.250.2420	UniProtKB/TrEMBL
	Myosin VI head, motor domain, U50 subdomain	UniProtKB/TrEMBL
	Vasodilator-stimulated phosphoprotein	UniProtKB/TrEMBL
InterPro	Kinesin_motor_dom_sf	UniProtKB/TrEMBL
	Myosin_head_motor_dom	UniProtKB/TrEMBL
	Myosin_N	UniProtKB/TrEMBL
	Myosin_S1_N	UniProtKB/TrEMBL
	Myosin_tail	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	XRCC4-like_C	UniProtKB/TrEMBL
KEGG Report	rno:311570	UniProtKB/TrEMBL
NCBI Gene	311570	ENTREZGENE
PANTHER	MYOSIN HEAVY CHAIN, NON-MUSCLE	UniProtKB/TrEMBL
	MYOSIN-7B	UniProtKB/TrEMBL
Pfam	Myosin_head	UniProtKB/TrEMBL
	Myosin_N	UniProtKB/TrEMBL
	Myosin_tail_1	UniProtKB/TrEMBL
PhenoGen	Myh7b	PhenoGen
PRINTS	MYOSINHEAVY	UniProtKB/TrEMBL
PROSITE	MYOSIN_MOTOR	UniProtKB/TrEMBL
	PS50096	UniProtKB/TrEMBL
	SH3_LIKE	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000018997	RatGTEx
SMART	MYSc	UniProtKB/TrEMBL
Superfamily-SCOP	Myosin rod fragments	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A0ABK0L9P6_RAT	UniProtKB/TrEMBL
	A0ABK0LT14_RAT	UniProtKB/TrEMBL
	B6RK61	ENTREZGENE, UniProtKB/TrEMBL
	F7F0L5_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-06-29	Myh7b	myosin heavy chain 7B	Myh7b	myosin, heavy chain 7B, cardiac muscle, beta	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Myh7b	myosin, heavy chain 7B, cardiac muscle, beta	Myh7b_predicted	myosin, heavy chain 7B, cardiac muscle, beta (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Myh7b_predicted	myosin, heavy polypeptide 7B, cardiac muscle, beta (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)

Mammalian Phenotype

Send us a Message

Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)

Mammalian Phenotype