Tada1 (transcriptional adaptor 1) - Rat Genome Database

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Gene: Tada1 (transcriptional adaptor 1) Rattus norvegicus
Analyze
Symbol: Tada1
Name: transcriptional adaptor 1
RGD ID: 1306774
Description: Predicted to enable transcription coactivator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of SAGA complex. Orthologous to human TADA1 (transcriptional adaptor 1); PARTICIPATES IN RNA polymerase II transcription initiation pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC360874; MGC109458; RGD1306774; similar to SPT3-associated factor 42; Tada1l; transcriptional adapter 1; transcriptional adapter 1-like protein; transcriptional adaptor 1 (HFI1 homolog, yeast) like; transcriptional adaptor 1- like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81381,165,871 - 81,180,421 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1381,165,850 - 81,188,495 (+)EnsemblGRCr8
mRatBN7.21378,632,908 - 78,646,863 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1378,632,866 - 78,647,504 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1381,251,220 - 81,265,181 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01382,564,771 - 82,578,733 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01379,803,557 - 79,817,523 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01384,588,587 - 84,602,542 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1384,588,351 - 84,603,134 (+)Ensemblrn6Rnor6.0
Rnor_5.01389,462,838 - 89,476,793 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41382,111,105 - 82,125,060 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1378,341,464 - 78,355,419 (+)NCBICelera
RGSC_v3.11382,027,639 - 82,139,843 (+)NCBI
Cytogenetic Map13q23NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (ISO)
nucleus  (IEA,ISO)
SAGA complex  (IBA,IEA,ISO)
SAGA-type complex  (IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Deregulated expression of a novel component of TFTC/STAGA histone acetyltransferase complexes, rat SGF29, in hepatocellular carcinoma: possible implication for the oncogenic potential of c-Myc. Kurabe N, etal., Oncogene. 2007 Aug 16;26(38):5626-34. Epub 2007 Mar 5.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Comprehensive gene review and curation RGD comprehensive gene curation
6. ATAC-king the complexity of SAGA during evolution. Spedale G, etal., Genes Dev. 2012 Mar 15;26(6):527-41. doi: 10.1101/gad.184705.111.
Additional References at PubMed
PMID:11564863   PMID:12477932  


Genomics

Comparative Map Data
Tada1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81381,165,871 - 81,180,421 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1381,165,850 - 81,188,495 (+)EnsemblGRCr8
mRatBN7.21378,632,908 - 78,646,863 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1378,632,866 - 78,647,504 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1381,251,220 - 81,265,181 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01382,564,771 - 82,578,733 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01379,803,557 - 79,817,523 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01384,588,587 - 84,602,542 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1384,588,351 - 84,603,134 (+)Ensemblrn6Rnor6.0
Rnor_5.01389,462,838 - 89,476,793 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41382,111,105 - 82,125,060 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1378,341,464 - 78,355,419 (+)NCBICelera
RGSC_v3.11382,027,639 - 82,139,843 (+)NCBI
Cytogenetic Map13q23NCBI
TADA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381166,856,510 - 166,876,264 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1166,856,510 - 166,876,360 (-)Ensemblhg38GRCh38
GRCh371166,825,747 - 166,845,501 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361165,092,371 - 165,112,103 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1139,930,880 - 139,950,792 (-)NCBICelera
Cytogenetic Map1q24.1NCBI
HuRef1138,072,799 - 138,092,712 (-)NCBIHuRef
CHM1_11168,247,461 - 168,267,374 (-)NCBICHM1_1
T2T-CHM13v2.01166,202,343 - 166,222,098 (-)NCBIT2T-CHM13v2.0
Tada1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391166,206,736 - 166,221,190 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1166,206,666 - 166,221,190 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381166,379,167 - 166,393,621 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1166,379,097 - 166,393,621 (+)Ensemblmm10GRCm38
MGSCv371168,309,298 - 168,323,752 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361168,215,975 - 168,230,296 (+)NCBIMGSCv36mm8
Celera1168,820,280 - 168,834,727 (+)NCBICelera
Cytogenetic Map1H2.3NCBI
cM Map173.74NCBI
Tada1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546210,057,559 - 10,073,865 (+)Ensembl
ChiLan1.0NW_00495546210,057,468 - 10,073,871 (+)NCBIChiLan1.0ChiLan1.0
TADA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2182,900,078 - 82,923,045 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1182,568,483 - 82,591,613 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01142,273,856 - 142,296,775 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11146,061,149 - 146,083,348 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1146,061,155 - 146,083,348 (-)EnsemblpanPan2panpan1.1
TADA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1731,513,289 - 31,529,891 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl731,513,496 - 31,528,843 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha731,051,937 - 31,068,532 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0731,335,115 - 31,351,744 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl731,335,104 - 31,351,740 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1731,172,869 - 31,189,461 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0731,205,097 - 31,221,708 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0731,443,614 - 31,460,232 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tada1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344101,184,357 - 101,198,008 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648119,031,207 - 19,046,062 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648119,031,207 - 19,046,057 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TADA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl484,174,476 - 84,187,514 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1484,174,481 - 84,190,077 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2491,888,031 - 91,900,992 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TADA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12562,155,931 - 62,176,022 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2562,155,982 - 62,177,657 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605563,892,640 - 63,912,787 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tada1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248264,920,372 - 4,941,368 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248264,920,364 - 4,940,982 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Tada1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11045,471,643 - 45,485,897 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tada1
21 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:265
Count of miRNA genes:144
Interacting mature miRNAs:164
Transcripts:ENSRNOT00000005090, ENSRNOT00000058689
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134863963493639634Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133721624190057603Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1338975045103588154Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)1371610804109350286Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)137161080489333251Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134874981487285480Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133996821183286298Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)137161080489333251Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137298450699745408Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1367635937109350286Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)137161080489333251Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13742179187286911Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133708798382087983Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)134098358585983585Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)134735425894285672Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1321120177109350286Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)1365613454109350286Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1368983334109350286Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)136242459288113509Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1367635937109350286Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
1576318Schws5Schwannoma susceptibility QTL 50.0351nervous system integrity trait (VT:0010566)post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)1364497900109350286Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1311081740103588154Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133981472684814726Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133996821184968211Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1364375743109350286Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)133828629883286298Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131103588154Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1367635937109350286Rat

Markers in Region
RH136996  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21378,647,225 - 78,647,420 (+)MAPPERmRatBN7.2
Rnor_6.01384,602,905 - 84,603,099NCBIRnor6.0
Rnor_5.01389,477,156 - 89,477,350UniSTSRnor5.0
RGSC_v3.41382,125,423 - 82,125,617UniSTSRGSC3.4
Celera1378,355,782 - 78,355,976UniSTS
Cytogenetic Map13q23UniSTS
RH138100  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21378,643,259 - 78,643,419 (+)MAPPERmRatBN7.2
Rnor_6.01384,598,939 - 84,599,098NCBIRnor6.0
Rnor_5.01389,473,190 - 89,473,349UniSTSRnor5.0
RGSC_v3.41382,121,457 - 82,121,616UniSTSRGSC3.4
Celera1378,351,817 - 78,351,976UniSTS
Cytogenetic Map13q23UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000005090   ⟹   ENSRNOP00000005090
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1381,165,850 - 81,180,475 (+)Ensembl
mRatBN7.2 Ensembl1378,632,866 - 78,647,504 (+)Ensembl
Rnor_6.0 Ensembl1384,588,351 - 84,602,424 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000058689   ⟹   ENSRNOP00000055484
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1381,165,860 - 81,180,418 (+)Ensembl
mRatBN7.2 Ensembl1378,633,023 - 78,647,453 (+)Ensembl
Rnor_6.0 Ensembl1384,588,702 - 84,603,134 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000133776   ⟹   ENSRNOP00000104013
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1381,165,850 - 81,188,495 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000164550   ⟹   ENSRNOP00000106045
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1381,166,072 - 81,180,475 (+)Ensembl
RefSeq Acc Id: NM_001037980   ⟹   NP_001033069
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81381,165,871 - 81,179,826 (+)NCBI
mRatBN7.21378,632,908 - 78,646,863 (+)NCBI
Rnor_6.01384,588,587 - 84,602,542 (+)NCBI
Rnor_5.01389,462,838 - 89,476,793 (+)NCBI
RGSC_v3.41382,111,105 - 82,125,060 (+)RGD
Celera1378,341,464 - 78,355,419 (+)RGD
Sequence:
RefSeq Acc Id: XM_039090914   ⟹   XP_038946842
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81381,168,795 - 81,180,421 (+)NCBI
mRatBN7.21378,635,906 - 78,646,547 (+)NCBI
RefSeq Acc Id: NP_001033069   ⟸   NM_001037980
- UniProtKB: Q5BJQ7 (UniProtKB/Swiss-Prot),   B0BN76 (UniProtKB/TrEMBL),   A0A0H2UHC2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000005090   ⟸   ENSRNOT00000005090
Ensembl Acc Id: ENSRNOP00000055484   ⟸   ENSRNOT00000058689
RefSeq Acc Id: XP_038946842   ⟸   XM_039090914
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000106045   ⟸   ENSRNOT00000164550
Ensembl Acc Id: ENSRNOP00000104013   ⟸   ENSRNOT00000133776

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5BJQ7-F1-model_v2 AlphaFold Q5BJQ7 1-335 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698975
Promoter ID:EPDNEW_R9494
Type:multiple initiation site
Name:Tada1_1
Description:transcriptional adaptor 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01384,588,674 - 84,588,734EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306774 AgrOrtholog
BioCyc Gene G2FUF-17545 BioCyc
Ensembl Genes ENSRNOG00000003816 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000005090 ENTREZGENE
  ENSRNOT00000005090.8 UniProtKB/Swiss-Prot
  ENSRNOT00000058689 ENTREZGENE
  ENSRNOT00000058689.5 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:9035442 IMAGE-MGC_LOAD
InterPro Hfi1/Tada1 UniProtKB/Swiss-Prot
KEGG Report rno:360874 UniProtKB/Swiss-Prot
MGC_CLONE MGC:187842 IMAGE-MGC_LOAD
NCBI Gene 360874 ENTREZGENE
PANTHER PTHR21277 UniProtKB/Swiss-Prot
  TRANSCRIPTIONAL ADAPTER 1 UniProtKB/Swiss-Prot
Pfam SAGA-Tad1 UniProtKB/Swiss-Prot
PhenoGen Tada1 PhenoGen
RatGTEx ENSRNOG00000003816 RatGTEx
UniProt A0A0H2UHC2 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LKT5_RAT UniProtKB/TrEMBL
  A0ABK0LQT0_RAT UniProtKB/TrEMBL
  B0BN76 ENTREZGENE, UniProtKB/TrEMBL
  Q5BJQ7 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-08-01 Tada1  transcriptional adaptor 1  Tada1l  transcriptional adaptor 1 (HFI1 homolog, yeast) like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Tada1l  transcriptional adaptor 1 (HFI1 homolog, yeast) like  RGD1306774  similar to SPT3-associated factor 42  Symbol and Name updated 1299863 APPROVED
2005-12-06 RGD1306774  similar to SPT3-associated factor 42  RGD1306774_predicted  similar to SPT3-associated factor 42 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1306774_predicted  similar to SPT3-associated factor 42 (predicted)  LOC360874_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC360874_predicted  similar to SPT3-associated factor 42 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL