Galt (galactose-1-phosphate uridylyltransferase) - Rat Genome Database

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Pathways
Gene: Galt (galactose-1-phosphate uridylyltransferase) Rattus norvegicus
Analyze
Symbol: Galt
Name: galactose-1-phosphate uridylyltransferase
RGD ID: 1306483
Description: Enables UDP-glucose:hexose-1-phosphate uridylyltransferase activity. Involved in UDP-alpha-D-glucose catabolic process and galactose metabolic process. Predicted to be located in Golgi apparatus. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in classic galactosemia. Orthologous to human GALT (galactose-1-phosphate uridylyltransferase); PARTICIPATES IN galactokinase deficiency pathway; galactose metabolic pathway; galactosemia pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: gal-1-P uridylyltransferase; galactose-1-phosphate uridyl transferase; LOC298003; MGC112778; UDP-glucose--hexose-1-phosphate uridylyltransferase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8561,722,871 - 61,726,128 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl561,722,466 - 61,726,125 (+)EnsemblGRCr8
mRatBN7.2556,927,039 - 56,930,284 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl556,926,724 - 56,930,265 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx558,901,349 - 58,904,565 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0560,720,179 - 60,723,395 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0560,706,240 - 60,709,458 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0558,144,679 - 58,147,946 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl558,144,705 - 58,147,929 (+)Ensemblrn6Rnor6.0
Rnor_5.0562,669,071 - 62,672,312 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4559,185,418 - 59,188,642 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera555,519,202 - 55,522,426 (+)NCBICelera
RGSC_v3.1559,185,596 - 59,188,821 (+)NCBI
Cytogenetic Map5q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,4-methylenedioxymethamphetamine  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
ammonium chloride  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
diazinon  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
diuron  (ISO)
doxorubicin  (ISO)
fenofibrate  (ISO)
folic acid  (ISO)
furan  (EXP)
GSK-J4  (ISO)
lead(0)  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methamphetamine  (ISO)
methimazole  (EXP)
methylmercury chloride  (ISO)
okadaic acid  (ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP)
pirinixic acid  (ISO)
propiconazole  (ISO)
S-nitrosoglutathione  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
streptozocin  (EXP)
sulfadimethoxine  (EXP)
tamibarotene  (ISO)
tamoxifen  (ISO)
tetrachloromethane  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
triphenyl phosphate  (ISO)
urethane  (ISO)
vanadyl sulfate  (ISO)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA)
Golgi apparatus  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Developmental aspects and some characteristics of mammalian galactose 1-phosphate uridyltransferase. Bertoli D and Segal S, J Biol Chem. 1966 Sep 10;241(17):4023-9.
2. In vivo and in vitro expression of rat galactose-1-phosphate uridyltransferase (GALT) in the developing central and peripheral nervous system. Daude N, etal., Brain Res Dev Brain Res. 1996 Jul 20;94(2):190-6.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. Developmental and tissue-specific modulation of rat galactose-1-phosphate uridyltransferase steady state messenger RNA and specific activity levels. Heidenreich RA, etal., Pediatr Res. 1993 Oct;34(4):416-9.
6. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
7. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
8. Online Mendelian Inheritance in Man, OMIM (TM). Online Mendelian Inheritance in Man, OMIM (TM).
9. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
10. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
11. GOA pipeline RGD automated data pipeline
12. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
14. Modulation of rat tissue galactose-1-phosphate uridyltransferase by uridine and uridine triphosphate. Rogers S and Segal S, Pediatr Res. 1991 Sep;30(3):222-6.
15. Activity of hepatic galactose-metabolizing enzymes in the pregnant rat and fetus. Rogers SR, etal., Pediatr Res. 1989 Feb;25(2):161-6.
16. Development of a rat subline with symptoms of hereditary galactosemia and study of its biochemical characteristics Solov'eva NA, etal., Genetika. 1975;11(5):63-71.
Additional References at PubMed
PMID:1897530   PMID:7323947   PMID:8400361   PMID:11286504   PMID:12477932   PMID:14741191   PMID:20605918   PMID:27005423   PMID:31845342   PMID:32882063   PMID:34964137  


Genomics

Comparative Map Data
Galt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8561,722,871 - 61,726,128 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl561,722,466 - 61,726,125 (+)EnsemblGRCr8
mRatBN7.2556,927,039 - 56,930,284 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl556,926,724 - 56,930,265 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx558,901,349 - 58,904,565 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0560,720,179 - 60,723,395 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0560,706,240 - 60,709,458 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0558,144,679 - 58,147,946 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl558,144,705 - 58,147,929 (+)Ensemblrn6Rnor6.0
Rnor_5.0562,669,071 - 62,672,312 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4559,185,418 - 59,188,642 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera555,519,202 - 55,522,426 (+)NCBICelera
RGSC_v3.1559,185,596 - 59,188,821 (+)NCBI
Cytogenetic Map5q22NCBI
GALT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38934,646,675 - 34,651,035 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl934,637,367 - 34,651,754 (+)Ensemblhg38GRCh38
GRCh37934,646,672 - 34,651,032 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36934,636,635 - 34,640,574 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34934,636,634 - 34,640,279NCBI
Celera934,578,106 - 34,582,045 (+)NCBICelera
Cytogenetic Map9p13.3NCBI
HuRef934,600,857 - 34,604,875 (+)NCBIHuRef
CHM1_1934,646,369 - 34,650,378 (+)NCBICHM1_1
T2T-CHM13v2.0934,665,194 - 34,669,563 (+)NCBIT2T-CHM13v2.0
Galt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39441,755,517 - 41,759,243 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl441,755,228 - 41,758,695 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38441,755,517 - 41,759,243 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl441,755,228 - 41,758,695 (+)Ensemblmm10GRCm38
MGSCv37441,702,126 - 41,705,998 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36441,944,015 - 41,947,191 (+)NCBIMGSCv36mm8
Celera441,416,035 - 41,419,907 (+)NCBICelera
Cytogenetic Map4A5NCBI
cM Map422.07NCBI
Galt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554721,487,173 - 1,490,986 (-)Ensembl
ChiLan1.0NW_0049554721,487,173 - 1,490,548 (-)NCBIChiLan1.0ChiLan1.0
GALT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21189,953,184 - 89,957,199 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1989,959,118 - 89,963,129 (-)NCBINHGRI_mPanPan1
GALT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11151,319,812 - 51,323,337 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1151,319,347 - 51,334,802 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1149,948,167 - 49,951,692 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01152,260,552 - 52,264,077 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1152,260,570 - 52,264,077 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11150,923,255 - 50,926,780 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01150,791,395 - 50,794,920 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01151,556,170 - 51,559,695 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Galt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947166,178,746 - 166,182,469 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365242,726,749 - 2,730,564 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365242,726,795 - 2,730,049 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GALT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1032,151,177 - 32,154,740 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11032,151,150 - 32,154,792 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21036,291,000 - 36,294,635 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GALT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11245,970,655 - 45,974,669 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1245,970,794 - 45,974,581 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603843,087,542 - 43,092,093 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Galt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473639,040,009 - 39,043,444 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473639,040,139 - 39,043,449 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Galt
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v113,796,252 - 3,799,509 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Galt
36 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:101
Count of miRNA genes:92
Interacting mature miRNAs:95
Transcripts:ENSRNOT00000019886
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)53275164977751649Rat
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53801167083011670Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)55266537294894052Rat
6907115Mcs29Mammary carcinoma susceptibility QTL 29mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)53800433183004331Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)544924861153890773Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)52367149379046465Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)538207390136631402Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51757663362576633Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)548523123134369373Rat
1598807Glom12Glomerulus QTL 122.7kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)53801167083011670Rat
1302786Kidm8Kidney mass QTL 828.15kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)53801167083011670Rat
1331782Rf36Renal function QTL 363.296kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)539019942102105896Rat
6903292Stl28Serum triglyceride level QTL 282.60.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)53331167378311673Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)551657967166600247Rat
1578767Stresp17Stress response QTL 174.30.01blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)53275164977751649Rat
1641922Alcrsp8Alcohol response QTL 8alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)51748608062486080Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555124766172190305Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)53998594884985948Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)5692228281330203Rat
6903306Scl35Serum cholesterol QTL 352.60.0073blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53331167378311673Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)53952692484526924Rat
1331773Scl26Serum cholesterol level QTL 263.065blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)54852312391770353Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)560601597137492949Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)51001906491770353Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)560511627105511627Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5706553574335773Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)536460764136631402Rat
1641903Alcrsp3Alcohol response QTL 3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)51748608062486080Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)51001906487027358Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52602321171023211Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)556546393101546393Rat
1600358Mamtr5Mammary tumor resistance QTL 5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)52367149368671493Rat

Markers in Region
AW553376  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8561,725,622 - 61,725,991 (+)Marker Load Pipeline
mRatBN7.2556,929,763 - 56,930,133 (+)MAPPERmRatBN7.2
Rnor_6.0558,147,428 - 58,147,797NCBIRnor6.0
Rnor_5.0562,671,794 - 62,672,163UniSTSRnor5.0
RGSC_v3.4559,188,141 - 59,188,510UniSTSRGSC3.4
Celera555,521,925 - 55,522,294UniSTS
Cytogenetic Map5q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 92 59 6 356 192 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000019886   ⟹   ENSRNOP00000019886
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl561,722,466 - 61,726,125 (+)Ensembl
mRatBN7.2 Ensembl556,926,724 - 56,930,265 (+)Ensembl
Rnor_6.0 Ensembl558,144,705 - 58,147,929 (+)Ensembl
RefSeq Acc Id: NM_001013089   ⟹   NP_001013107
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8561,722,900 - 61,726,124 (+)NCBI
mRatBN7.2556,927,039 - 56,930,265 (+)NCBI
Rnor_6.0558,144,705 - 58,147,929 (+)NCBI
Rnor_5.0562,669,071 - 62,672,312 (+)NCBI
RGSC_v3.4559,185,418 - 59,188,642 (+)RGD
Celera555,519,202 - 55,522,426 (+)RGD
Sequence:
RefSeq Acc Id: XM_017593237   ⟹   XP_017448726
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8561,723,396 - 61,726,128 (+)NCBI
mRatBN7.2556,927,055 - 56,930,284 (+)NCBI
Rnor_6.0558,144,679 - 58,147,946 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039109440   ⟹   XP_038965368
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8561,723,396 - 61,726,128 (+)NCBI
mRatBN7.2556,927,102 - 56,930,284 (+)NCBI
RefSeq Acc Id: XM_039109441   ⟹   XP_038965369
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8561,723,396 - 61,726,128 (+)NCBI
mRatBN7.2556,927,102 - 56,930,284 (+)NCBI
RefSeq Acc Id: XM_063287304   ⟹   XP_063143374
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8561,722,871 - 61,726,128 (+)NCBI
RefSeq Acc Id: NP_001013107   ⟸   NM_001013089
- UniProtKB: Q4KM61 (UniProtKB/Swiss-Prot),   P43424 (UniProtKB/Swiss-Prot),   A6IIX1 (UniProtKB/TrEMBL),   A0A8L2QA97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017448726   ⟸   XM_017593237
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSRNOP00000019886   ⟸   ENSRNOT00000019886
RefSeq Acc Id: XP_038965368   ⟸   XM_039109440
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038965369   ⟸   XM_039109441
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063143374   ⟸   XM_063287304
- Peptide Label: isoform X1
- UniProtKB: A0A8L2QA97 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P43424-F1-model_v2 AlphaFold P43424 1-379 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693658
Promoter ID:EPDNEW_R4183
Type:initiation region
Name:Galt_1
Description:galactose-1-phosphate uridylyltransferase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0558,144,757 - 58,144,817EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306483 AgrOrtholog
BioCyc Gene G2FUF-41542 BioCyc
Ensembl Genes ENSRNOG00000014766 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000019886 ENTREZGENE
Gene3D-CATH 3.30.428.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7370278 IMAGE-MGC_LOAD
InterPro GalP_UDPtransf1 UniProtKB/Swiss-Prot
  GalP_UDPtransf1_His-AS UniProtKB/Swiss-Prot
  GalP_Utransf_C UniProtKB/Swiss-Prot
  GalP_Utransf_N UniProtKB/Swiss-Prot
  HIT-like_sf UniProtKB/Swiss-Prot
KEGG Report rno:298003 UniProtKB/Swiss-Prot
MGC_CLONE MGC:112778 IMAGE-MGC_LOAD
NCBI Gene 298003 ENTREZGENE
PANTHER GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE UniProtKB/Swiss-Prot
  PTHR11943 UniProtKB/Swiss-Prot
Pfam GalP_UDP_tr_C UniProtKB/Swiss-Prot
  GalP_UDP_transf UniProtKB/Swiss-Prot
PhenoGen Galt PhenoGen
PIRSF GalT UniProtKB/Swiss-Prot
PROSITE GAL_P_UDP_TRANSF_I UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000014766 RatGTEx
Superfamily-SCOP SSF54197 UniProtKB/Swiss-Prot
UniProt A0A8L2QA97 ENTREZGENE, UniProtKB/TrEMBL
  A6IIX1 ENTREZGENE, UniProtKB/TrEMBL
  A6IIX2_RAT UniProtKB/TrEMBL
  GALT_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q4KM61 ENTREZGENE
UniProt Secondary Q4KM61 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-10-17 Galt  galactose-1-phosphate uridylyltransferase  Galt  galactose-1-phosphate uridyl transferase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Galt  galactose-1-phosphate uridyl transferase  Galt_predicted  galactose-1-phosphate uridyl transferase (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Galt_predicted  galactose-1-phosphate uridyl transferase (predicted)      Symbol and Name status set to approved 70820 APPROVED