Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Galt | Rat | galactosemia | | ISO | GALT (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:22773758 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Galt | Rat | galactosemia | | ISO | GALT (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:22773758 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| # | Reference Title | Reference Citation |
| 1. | Developmental aspects and some characteristics of mammalian galactose 1-phosphate uridyltransferase. | Bertoli D and Segal S, J Biol Chem. 1966 Sep 10;241(17):4023-9. |
| 2. | In vivo and in vitro expression of rat galactose-1-phosphate uridyltransferase (GALT) in the developing central and peripheral nervous system. | Daude N, etal., Brain Res Dev Brain Res. 1996 Jul 20;94(2):190-6. |
| 3. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
| 4. | Rat ISS GO annotations from GOA human gene data--August 2006 | GOA data from the GO Consortium |
| 5. | Developmental and tissue-specific modulation of rat galactose-1-phosphate uridyltransferase steady state messenger RNA and specific activity levels. | Heidenreich RA, etal., Pediatr Res. 1993 Oct;34(4):416-9. |
| 6. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
| 7. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
| 8. | Online Mendelian Inheritance in Man, OMIM (TM). | Online Mendelian Inheritance in Man, OMIM (TM). |
| 9. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
| 10. | SMPDB Annotation Import Pipeline | Pipeline to import SMPDB annotations from SMPDB into RGD |
| 11. | GOA pipeline | RGD automated data pipeline |
| 12. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
| 13. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
| 14. | Modulation of rat tissue galactose-1-phosphate uridyltransferase by uridine and uridine triphosphate. | Rogers S and Segal S, Pediatr Res. 1991 Sep;30(3):222-6. |
| 15. | Activity of hepatic galactose-metabolizing enzymes in the pregnant rat and fetus. | Rogers SR, etal., Pediatr Res. 1989 Feb;25(2):161-6. |
| 16. | Development of a rat subline with symptoms of hereditary galactosemia and study of its biochemical characteristics | Solov'eva NA, etal., Genetika. 1975;11(5):63-71. |
| PMID:1897530 | PMID:7323947 | PMID:8400361 | PMID:11286504 | PMID:12477932 | PMID:14741191 | PMID:20605918 | PMID:27005423 | PMID:31845342 | PMID:32882063 | PMID:34964137 |
| Galt (Rattus norvegicus - Norway rat) |
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| GALT (Homo sapiens - human) |
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| Galt (Mus musculus - house mouse) |
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| Galt (Chinchilla lanigera - long-tailed chinchilla) |
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| GALT (Pan paniscus - bonobo/pygmy chimpanzee) |
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| GALT (Canis lupus familiaris - dog) |
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| Galt (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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| GALT (Sus scrofa - pig) |
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| GALT (Chlorocebus sabaeus - green monkey) |
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| Galt (Heterocephalus glaber - naked mole-rat) |
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| Galt (Rattus rattus - black rat) |
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Variants in Galt
36 total Variants
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| The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
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| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
| AW553376 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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musculoskeletal system
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nervous system
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renal system
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reproductive system
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respiratory system
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sensory system
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visual system
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| 16 | 12 | 67 | 162 | 91 | 90 | 59 | 92 | 59 | 6 | 356 | 192 | 11 | 141 | 81 | 92 | 31 | 17 | 17 |
| RefSeq Transcripts | NM_001013089 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| XM_006238033 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_008763615 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017593237 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017593238 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_039109440 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_039109441 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_063287304 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | AC110351 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| BC098756 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| CH473962 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| JAXUCZ010000005 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| L05541 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| Ensembl Acc Id: | ENSRNOT00000019886 ⟹ ENSRNOP00000019886 | ||||||||||||||||
| Type: | CODING | ||||||||||||||||
| Position: |
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| RefSeq Acc Id: | NM_001013089 ⟹ NP_001013107 | ||||||||||||||||||||||||||||
| RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
| Type: | CODING | ||||||||||||||||||||||||||||
| Position: |
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| Sequence: |
| RefSeq Acc Id: | XM_017593237 ⟹ XP_017448726 | ||||||||||||||||
| Type: | CODING | ||||||||||||||||
| Position: |
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| Sequence: |
| RefSeq Acc Id: | XM_039109440 ⟹ XP_038965368 | ||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| RefSeq Acc Id: | XM_039109441 ⟹ XP_038965369 | ||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| RefSeq Acc Id: | XM_063287304 ⟹ XP_063143374 | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Protein RefSeqs | NP_001013107 | (Get FASTA) | NCBI Sequence Viewer |
| XP_017448726 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_038965368 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_038965369 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_063143374 | (Get FASTA) | NCBI Sequence Viewer | |
| GenBank Protein | AAC37609 | (Get FASTA) | NCBI Sequence Viewer |
| AAH98756 | (Get FASTA) | NCBI Sequence Viewer | |
| EDL98691 | (Get FASTA) | NCBI Sequence Viewer | |
| EDL98692 | (Get FASTA) | NCBI Sequence Viewer | |
| Ensembl Protein | ENSRNOP00000019886 | ||
| GenBank Protein | P43424 | (Get FASTA) | NCBI Sequence Viewer |
| RefSeq Acc Id: | NP_001013107 ⟸ NM_001013089 |
| - UniProtKB: | Q4KM61 (UniProtKB/Swiss-Prot), P43424 (UniProtKB/Swiss-Prot), A6IIX1 (UniProtKB/TrEMBL), A0A8L2QA97 (UniProtKB/TrEMBL) |
| - Sequence: |
| RefSeq Acc Id: | XP_017448726 ⟸ XM_017593237 |
| - Peptide Label: | isoform X3 |
| - Sequence: |
| Ensembl Acc Id: | ENSRNOP00000019886 ⟸ ENSRNOT00000019886 |
| RefSeq Acc Id: | XP_038965368 ⟸ XM_039109440 |
| - Peptide Label: | isoform X2 |
| RefSeq Acc Id: | XP_038965369 ⟸ XM_039109441 |
| - Peptide Label: | isoform X4 |
| RefSeq Acc Id: | XP_063143374 ⟸ XM_063287304 |
| - Peptide Label: | isoform X1 |
| - UniProtKB: | A0A8L2QA97 (UniProtKB/TrEMBL) |
| Name | Modeler | Protein Id | AA Range | Protein Structure |
| AF-P43424-F1-model_v2 | AlphaFold | P43424 | 1-379 | view protein structure |
| eQTL | View at Phenogen | |
| WGCNA | View at Phenogen | |
| Tissue/Strain Expression | View at Phenogen |
| RGD ID: | 13693658 | ||||||||
| Promoter ID: | EPDNEW_R4183 | ||||||||
| Type: | initiation region | ||||||||
| Name: | Galt_1 | ||||||||
| Description: | galactose-1-phosphate uridylyltransferase | ||||||||
| SO ACC ID: | SO:0000170 | ||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
| Experiment Methods: | Single-end sequencing. | ||||||||
| Position: |
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| Database | Acc Id | Source(s) |
| AGR Gene | RGD:1306483 | AgrOrtholog |
| BioCyc Gene | G2FUF-41542 | BioCyc |
| Ensembl Genes | ENSRNOG00000014766 | Ensembl, ENTREZGENE |
| Ensembl Transcript | ENSRNOT00000019886 | ENTREZGENE |
| Gene3D-CATH | 3.30.428.10 | UniProtKB/Swiss-Prot |
| IMAGE_CLONE | IMAGE:7370278 | IMAGE-MGC_LOAD |
| InterPro | GalP_UDPtransf1 | UniProtKB/Swiss-Prot |
| GalP_UDPtransf1_His-AS | UniProtKB/Swiss-Prot | |
| GalP_Utransf_C | UniProtKB/Swiss-Prot | |
| GalP_Utransf_N | UniProtKB/Swiss-Prot | |
| HIT-like_sf | UniProtKB/Swiss-Prot | |
| KEGG Report | rno:298003 | UniProtKB/Swiss-Prot |
| MGC_CLONE | MGC:112778 | IMAGE-MGC_LOAD |
| NCBI Gene | 298003 | ENTREZGENE |
| PANTHER | GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE | UniProtKB/Swiss-Prot |
| PTHR11943 | UniProtKB/Swiss-Prot | |
| Pfam | GalP_UDP_tr_C | UniProtKB/Swiss-Prot |
| GalP_UDP_transf | UniProtKB/Swiss-Prot | |
| PhenoGen | Galt | PhenoGen |
| PIRSF | GalT | UniProtKB/Swiss-Prot |
| PROSITE | GAL_P_UDP_TRANSF_I | UniProtKB/Swiss-Prot |
| RatGTEx | ENSRNOG00000014766 | RatGTEx |
| Superfamily-SCOP | SSF54197 | UniProtKB/Swiss-Prot |
| UniProt | A0A8L2QA97 | ENTREZGENE, UniProtKB/TrEMBL |
| A6IIX1 | ENTREZGENE, UniProtKB/TrEMBL | |
| A6IIX2_RAT | UniProtKB/TrEMBL | |
| GALT_RAT | UniProtKB/Swiss-Prot, ENTREZGENE | |
| Q4KM61 | ENTREZGENE | |
| UniProt Secondary | Q4KM61 | UniProtKB/Swiss-Prot |
| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2008-10-17 | Galt | galactose-1-phosphate uridylyltransferase | Galt | galactose-1-phosphate uridyl transferase | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
| 2005-12-06 | Galt | galactose-1-phosphate uridyl transferase | Galt_predicted | galactose-1-phosphate uridyl transferase (predicted) | Symbol and Name updated | 1559027 | APPROVED |
| 2005-01-12 | Galt_predicted | galactose-1-phosphate uridyl transferase (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |