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Gene: Lrfn1 (leucine rich repeat and fibronectin type III domain containing 1) Rattus norvegicus

Analyze

Symbol:

Lrfn1

Name:

leucine rich repeat and fibronectin type III domain containing 1

RGD ID:

1304707

Description:

Involved in regulation of postsynaptic density assembly. Is active in postsynaptic density membrane. Orthologous to human LRFN1 (leucine rich repeat and fibronectin type III domain containing 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

60S ribosomal protein L38-like; leucine-rich repeat and fibronectin type III domain-containing protein 1; LOC100911296; LOC365222; synaptic adhesion-like molecule 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	92,866,864 - 92,888,984 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	92,874,827 - 92,888,982 (+)	Ensembl				GRCr8
mRatBN7.2	1	83,742,442 - 83,761,450 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	83,682,964 - 83,761,449 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	89,157,484 - 89,171,724 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	97,615,927 - 97,630,037 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	90,913,354 - 90,927,594 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	85,290,887 - 85,308,498 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	85,291,462 - 85,300,825 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	86,506,887 - 86,524,071 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	83,567,056 - 83,580,643 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	78,143,426 - 78,157,015 (+)	NCBI		Celera
RGSC_v3.1	1	83,645,167 - 83,653,000 (+)	NCBI
Cytogenetic Map	1	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3,3',4,4',5-pentachlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

Butylbenzyl phthalate (ISO)

C60 fullerene (EXP)

chlorpyrifos (EXP,ISO)

choline (ISO)

cisplatin (ISO)

dorsomorphin (ISO)

entinostat (ISO)

ethanol (ISO)

ethylparaben (ISO)

fenvalerate (EXP)

folic acid (ISO)

fulvestrant (ISO)

hexane (EXP)

hydralazine (ISO)

L-methionine (ISO)

Licochalcone B (ISO)

maneb (ISO)

N(4)-hydroxycytidine (ISO)

N-Nitrosopyrrolidine (ISO)

O-methyleugenol (ISO)

ozone (ISO)

paracetamol (EXP)

paraquat (ISO)

propanal (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

tremolite asbestos (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of postsynaptic density assembly (IDA,IMP)

Cellular Component

cell surface (IEA,ISO)

membrane (IEA)

postsynaptic density membrane (IBA,IDA,IEA,IEP)

synapse (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	SALM synaptic cell adhesion-like molecules regulate the differentiation of excitatory synapses.	Ko J, etal., Neuron. 2006 Apr 20;50(2):233-45. doi: 10.1016/j.neuron.2006.04.005.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:16828986

Genomics

Comparative Map Data

Lrfn1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	92,866,864 - 92,888,984 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	92,874,827 - 92,888,982 (+)	Ensembl				GRCr8
mRatBN7.2	1	83,742,442 - 83,761,450 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	83,682,964 - 83,761,449 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	89,157,484 - 89,171,724 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	97,615,927 - 97,630,037 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	90,913,354 - 90,927,594 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	85,290,887 - 85,308,498 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	85,291,462 - 85,300,825 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	86,506,887 - 86,524,071 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	83,567,056 - 83,580,643 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	78,143,426 - 78,157,015 (+)	NCBI		Celera
RGSC_v3.1	1	83,645,167 - 83,653,000 (+)	NCBI
Cytogenetic Map	1	q21	NCBI

LRFN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	39,306,566 - 39,320,863 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	39,306,566 - 39,320,966 (-)	Ensembl			hg38	GRCh38
GRCh37	19	39,797,206 - 39,811,503 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	44,489,297 - 44,497,816 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	19	36,599,137 - 36,607,655 (-)	NCBI		Celera
Cytogenetic Map	19	q13.2	NCBI
HuRef	19	36,243,970 - 36,252,487 (-)	NCBI		HuRef
CHM1_1	19	39,798,264 - 39,806,781 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	42,110,835 - 42,125,134 (-)	NCBI		T2T-CHM13v2.0

Lrfn1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	28,151,194 - 28,167,667 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	28,151,405 - 28,167,667 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	28,451,893 - 28,468,242 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	28,451,980 - 28,468,242 (+)	Ensembl			mm10	GRCm38
MGSCv37	7	29,237,004 - 29,252,567 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	28,160,798 - 28,170,892 (+)	NCBI		MGSCv36	mm8
Celera	7	23,010,018 - 23,029,505 (+)	NCBI		Celera
Cytogenetic Map	7	A3	NCBI
cM Map	7	16.77	NCBI

Lrfn1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955468	234,123 - 241,535 (+)	Ensembl
ChiLan1.0	NW_004955468	231,164 - 240,924 (+)	NCBI	ChiLan1.0	ChiLan1.0

LRFN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	45,602,226 - 45,616,357 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	47,472,821 - 47,486,949 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	36,405,065 - 36,419,178 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	44,951,724 - 44,965,757 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	44,952,799 - 44,960,507 (-)	Ensembl			panPan2	panpan1.1

LRFN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	113,888,736 - 113,898,240 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	113,891,484 - 113,898,140 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	113,287,918 - 113,299,713 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	114,485,184 - 114,496,978 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	114,490,733 - 114,496,156 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	114,043,864 - 114,055,645 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	113,676,649 - 113,688,444 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	114,671,778 - 114,683,620 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Lrfn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	13,739,195 - 13,751,202 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936661	2,167,198 - 2,174,336 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936661	2,167,264 - 2,179,193 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LRFN1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	47,971,275 - 47,978,430 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	47,971,270 - 47,981,532 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	143,764,593 - 143,776,877 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LRFN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	33,913,147 - 33,927,320 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	33,912,176 - 33,922,162 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666073	11,933,514 - 11,947,822 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lrfn1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624794	12,650,929 - 12,658,798 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624794	12,651,391 - 12,663,781 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Lrfn1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	167,525,814 - 167,543,571 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Lrfn1
149 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	218
Count of miRNA genes:	159
Interacting mature miRNAs:	171
Transcripts:	ENSRNOT00000026900, ENSRNOT00000057073
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578649	Bmd8	Bone mineral density QTL 8	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	51940904	101229020	Rat
1582234	Gluco18	Glucose level QTL 18	3.4	0.0003	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	87889942	132889942	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
1331800	Scl25	Serum cholesterol level QTL 25	3.013		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	87785026	142582336	Rat
7421628	Bp361	Blood pressure QTL 361		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	83019780	128019780	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	66404680	111404680	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
631512	Scl6	Serum cholesterol level QTL 6	9.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	81269860	99645535	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	66009857	160501508	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	66400974	132889942	Rat
1549903	Bp267	Blood pressure QTL 267			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	84107164	115183752	Rat
2313083	Bmd74	Bone mineral density QTL 74	4	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	91302413	136302413	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	51511344	153680016	Rat
61342	Bp27	Blood pressure QTL 27	3.4	0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	65405637	96805205	Rat
1358192	Ept13	Estrogen-induced pituitary tumorigenesis QTL 13	3.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	86622262	131622262	Rat
6903308	Scl36	Serum cholesterol QTL 36	2	0.0125	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	58769992	103769992	Rat
2300164	Bmd44	Bone mineral density QTL 44	5.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	1	66077886	111077886	Rat
738022	Anxrr13	Anxiety related response QTL 13	4.6	0.00039	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of, or within a discrete space in an open field apparatus (CMO:0001514)	1	92683681	137683681	Rat
10054135	Gmadr2	Adrenal mass QTL 2	1.97	0.0129	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	86993904	131993904	Rat
152025249	Scl82	Serum cholesterol level QTL 82	4.77		blood cholesterol amount (VT:0000180)		1	52891222	109116986	Rat
1331749	Hrtrt11	Heart rate QTL 11	2.973		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	92683681	137683681	Rat
7411712	Strs4	Sensitivity to stroke QTL 4	8.7		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	1	87558587	132558587	Rat

Markers in Region

D1Uwm1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	83,746,356 - 83,746,486 (-)	MAPPER	mRatBN7.2
Rnor_6.0	1	85,305,849 - 85,305,978	NCBI	Rnor6.0
Rnor_5.0	1	86,520,928 - 86,521,057	UniSTS	Rnor5.0
RGSC_v3.4	1	83,566,126 - 83,566,256	RGD	RGSC3.4
RGSC_v3.4	1	83,566,127 - 83,566,256	UniSTS	RGSC3.4
Celera	1	78,142,497 - 78,142,626	UniSTS
RGSC_v3.1	1	83,644,237 - 83,644,367	RGD
Cytogenetic Map	1	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	66	164	91	90	59	89	59	6	351	188	11	143	80	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001127694	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC110862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000026900 ⟹ ENSRNOP00000026900

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	1	85,297,239 - 85,300,825 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000057073 ⟹ ENSRNOP00000053905

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	92,874,827 - 92,888,982 (+)	Ensembl
mRatBN7.2 Ensembl	1	83,682,964 - 83,761,449 (+)	Ensembl
Rnor_6.0 Ensembl	1	85,291,462 - 85,300,825 (-)	Ensembl

RefSeq Acc Id:

NM_001127694 ⟹ NP_001121166

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,874,828 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,747,292 - 83,761,449 (+)	NCBI
Rnor_6.0	1	85,291,462 - 85,300,825 (-)	NCBI
Rnor_5.0	1	86,506,887 - 86,524,071 (-)	NCBI
RGSC_v3.4	1	83,567,056 - 83,580,643 (+)	RGD
Celera	1	78,147,600 - 78,157,015 (+)	NCBI

Sequence:

show sequence

ATGGCTCCAGGCCCCTTCTCCTCCGGGCTCCTCTCGCCACCACCTGCTGCTCTCCCTTTTCTGC
TGCTGCTCTGGGCAGGAGCATCTCGTGGCCAGCCCTGCCCCGGTCGCTGCATCTGTCAGAACGT
GGCACCTACACTGACCATGCTGTGTGCCAAGACCGGCCTGCTCTTCGTGCCACCCGCCATCGAC
AGGCGTGTGGTAGAGCTGCGGCTCACTGACAACTTCATTGCGGCTGTGCGTCGTCGAGACTTCG
CCAATATGACCAGCCTGGTCCACCTCACCCTGTCTCGAAACACCATTGGCCAGGTAGCAGCTGG
CGCCTTTGCTGACCTCCGTGCTCTCCGGGCCCTGCATCTTGACAGCAATCGTCTTGCAGAAGTG
CGAGGGGACCAGCTCCGGGGCTTGGGTAACCTCCGCCACTTGATCCTTGGCAACAATCAGATCC
GTAAGGTGGAGTCGGCAGCCTTTGACGCTTTCCTGTCCACCGTGGAGGACCTGGATCTATCCTA
CAACAACCTGGAGGCACTGCCATGGGAGGCGGTGGGTCAGATGGTGAACTTGAACACCCTCACG
CTGGACCACAACCTCATTGATCACATTGCGGAGGGCACCTTCGTGCAGCTGCACAAACTCGTGC
GCTTGGACATGACCTCTAACCGCCTACATAAACTGCCCCCCGACGGACTGTTCCTGAGGTCCCA
GGGCGGTGGGCCCAAGCCACCTACCCCACTGACCGTCAGCTTCGGTGGCAACCCGCTGCACTGC
AACTGTGAACTGCTCTGGCTTCGGCGCCTGACCAGGGAGGATGACTTGGAGACATGTGCCACGC
CCGAGCATCTCACTGACCGCTATTTCTGGTCCATCCCCGAGGAGGAATTTCTCTGTGAGCCCCC
GCTCATCACACGACAGGCAGGCGGCCGGGCCCTAGTTGTGGAGGGCCAGGCTGTCAGTCTGCGC
TGCCGGGCGGTGGGTGACCCAGAGCCCGTGGTGCATTGGGTGGCACCGGATGGGCGGCTGCTGG
GGAACTCCAGCCGGACTCGGGTCCGTGGTGACGGAACGCTGGATGTGACTATCACCACCCTGAG
GGACAGCGGTACCTTCACTTGCATAGCCTCCAATGCTGCAGGGGAAGCCACTGCACCTGTGGAG
GTATGTGTGGTGCCTCTGCCACTCATGGCGCCCCCACCTGCTGCCCCGCCGCCTCTCACTGAAC
CTGGTTCTTCTGACATCGCCACACCGGGCAGACCTGGTGCCAACGACTCAGCCACTGAGCGCAG
GCTTGTGGCTGCTGAACTTACGTCCAGCTCTGTGCTCATCCGCTGGCCGGCCCAGAGGCCAGTG
CCTGGCATCCGCATGTACCAAGTGCAATACAACAGCTCTGCGGATGACTCCCTAGTCTACAGGA
TGATCCCTTCTACCAGCCAGACCTTCCTGGTGAATGATTTGGCGGCTGGCCGCGCCTATGATTT
GTGTGTGTTGGCAGTCTACGACGATGGGGCCACCGCTCTGCCGGCCACCAGAGTGGTGGGCTGT
GTGCAATTCACCACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGCCCACTTCTTGGGCG
GCACCATGATCATCGCCATCGGGGGCGTCATCGTAGCCTCGGTCCTCGTTTTCATCGTTCTGCT
CATGATTCGCTACAAAGTGTATGGCGATGGGGACAGCCGCCGCATCAAGGGGACGTCCAGATCG
CCCCCTCGGGTCAGCCACGTGTGCTCTCAGACCAATGGTTCAAGTGCACAGCAAGCCTCCGCCC
CACCAGCTCCAGACCGCTACGAGGCGCTGCGGGAGGTGGCTGTCCCTGCAGCCATCGAGGCAAA
GGCCATGGAGGCCGAGGCGACTTCCACTGAGCTAGAGGTGGTGCTTGGACGCTCTCTGGGTGGC
TCGGCCACCTCTCTGTGCTTGCTGCCCTCCGAGGAAACTTCAGGGGAGGAATCTAGGGCCGTAA
CCGGCCCTCGAAGGAGCCGTTCGGGGGCCTTGGGGCCTCCAACTTCAGCACCCCCAACGCTAGC
TCTGGTTCGTGGGGGATCCCCGGCCCGGCCGAGGCCACAACAACGCTATTCCTTTGATGGGGAC
TACGGGGCGCTGTTCCAGAGTCACAGTTACCCGCGCCGCGCCCGGCGGACAAAGCGCCACCGGT
CCACGCCCCACCTGGACGGGGCTGGAGGGGGCGCGGCCGGGGAGGACGGAGACCTGGGGCTGGG
CTCCGCCCGGGCACGCCTGGCCTTCACCAGCACCGAATGGATGCTGGAGAGTACGGTGTGAGCG
GCGGGCGCACGGGCACCGGGACGCCTGTGGGCCGCACTTAGTTGCCCAGCCCGGCCGGATGCGG
GGGAGGCTGGAGAGAAGGGACGCGCGAGGGGCGGGGCCTACCGCAGTCAAGGCCACGCCCACCA
GCCTCCGGATTGGAGGAAGGCCGCCGGCCTCTCCGACTCCACCCCTCTGCCCTGTCCCCCGCGC
GCTCGCGGACC

hide sequence

RefSeq Acc Id:

XM_006228626 ⟹ XP_006228688

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,873,857 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,746,313 - 83,761,450 (+)	NCBI
Rnor_6.0	1	85,290,887 - 85,306,746 (-)	NCBI
Rnor_5.0	1	86,506,887 - 86,524,071 (-)	NCBI

Sequence:

show sequence

GGGTTGGAGAGTGGAGGGTGGGGTTGAAGACCTGGCTCTTCCCACCCCACCCCACCCTAACTCC
CCCACCTGCCGGGTATCTGCAGATAGCGCCCCAGTTGCCTATATCTTGCTGGTAAGGCTGGGGA
AACTCTGGGGATGGCTGGTGGCAGAATCTTGTTGGAACCCGGCTTTGGAGACTCAATTCCTTCC
TGATGGAGTCCCACCTGCTGAACTATGACCTTTGGCCCTGGCTTGTGCCTGATTCTTTTTGGGG
AAGGGTGTAACAGGGACTGGAGGGGGTGTTAGAATGTATTTGGCTTGGGAAGTAGGTGGGGCAG
GAGTGCCAGGGCCATGAGGGATAGGTATCAGTGACTGTGAGTGTGAATCTAGCTGGTCTGTTGA
CTGTGCTCTGTGCTTTGCTATTTTGTGTGCATTTACAAGTGAGTTGGTTCCTCATGGGACTGTG
GCCTGAGTGTATCTGTGATGCATGAGCCTCTTAGAGCGCTTACAAAGTGCCTGTGTGCTTGTTC
ATGGCTCCCCGCTTTGTCAGCGTGTGTCCGCGCTAGGGGATCTGTGTCCATGTGTAAGGTATGT
GTGTACCAGCTGTGCGTGCGTGTGTTTGTTGGTGCTTTATCTGCTCTATGGCTGCCAGTGGGAA
CACGTGAAGTGGCACGGATGCGTTTCGGTGTGTGAGTGTGCACCTATGTATCTTTCATTGTGCA
GGTGAGTCTTACATGTGTGAGCCACTGTGTGTTGACAAGTGTGCAAGGACTATATAGATGTAGG
TGTCTGGTTGTCTATTATGGGGTGCGTGGGTTTTTCTGTATCTGCACATCTGTGAGTGTGCAAC
GGATATCGTGTGTGTGTGTGTGCGCGTGCGTGTGCGTGTGTGTGTGTGTGTGTGGTGTATGCAG
ATACGTCAGCCTTGAGAGTGTGTGTCTATCTTGGGTGTCCTTTCCTACTTTAGTCTCTGGGGAC
CAGGCTCTGTATGTTTACACATGTATCTGCAAGACACACGTGTACTGGGCCTTGGGCACAAGAC
TGGCCCTACTTCTGGGTCTAGTGAGTGTGATCTGTAGCACGCCAAGGCATAGTGCGTGGTCCTG
GACACAAATGTAACCGTATCCTGGGCTCAGTGTCCTGAAGGGTAGGGAGCACCCATACTGGGCT
GATGTTCCCTGGTAGAGCTTGGGTTGGGACTCACGTAGATCGGGAGAGATCCACCAGTGTGTAT
GTGCATGGAGAGGAGACGGTAGCATAGGAACCCTAGTGCTTCTGGGCTCTGGATCCCGCTCATG
ACTTTGGAGTTGGGGAGCCCAGACGAGAACTCTTGAGTTGTAAAGGAAGAGGTGTCTGCTCCAT
ACATCTGAGTCTCAAGAGGAGAAGGCTGGCATTGAGAATTCTAGAGCTGCTAAGAAGAGTACCG
GCCCAGGCCCTGACTCCTTGAAGAGAGATGAAGAAACCGAGATTCAGAGAGGTTCAGACACTTG
CCCGAGGTCACACAGCTAGTCTCTCCCACTCCTCCTGCCTCCCCCGTGCACCATGGCTCCAGGC
CCCTTCTCCTCCGGGCTCCTCTCGCCACCACCTGCTGCTCTCCCTTTTCTGCTGCTGCTCTGGG
CAGGAGCATCTCGTGGCCAGCCCTGCCCCGGTCGCTGCATCTGTCAGAACGTGGCACCTACACT
GACCATGCTGTGTGCCAAGACCGGCCTGCTCTTCGTGCCACCCGCCATCGACAGGCGTGTGGTA
GAGCTGCGGCTCACTGACAACTTCATTGCGGCTGTGCGTCGTCGAGACTTCGCCAATATGACCA
GCCTGGTCCACCTCACCCTGTCTCGAAACACCATTGGCCAGGTAGCAGCTGGCGCCTTTGCTGA
CCTCCGTGCTCTCCGGGCCCTGCATCTTGACAGCAATCGTCTTGCAGAAGTGCGAGGGGACCAG
CTCCGGGGCTTGGGTAACCTCCGCCACTTGATCCTTGGCAACAATCAGATCCGTAAGGTGGAGT
CGGCAGCCTTTGACGCTTTCCTGTCCACCGTGGAGGACCTGGATCTATCCTACAACAACCTGGA
GGCACTGCCATGGGAGGCGGTGGGTCAGATGGTGAACTTGAACACCCTCACGCTGGACCACAAC
CTCATTGATCACATTGCGGAGGGCACCTTCGTGCAGCTGCACAAACTCGTGCGCTTGGACATGA
CCTCTAACCGCCTACATAAACTGCCCCCCGACGGACTGTTCCTGAGGTCCCAGGGCGGTGGGCC
CAAGCCACCTACCCCACTGACCGTCAGCTTCGGTGGCAACCCGCTGCACTGCAACTGTGAACTG
CTCTGGCTTCGGCGCCTGACCAGGGAGGATGACTTGGAGACATGTGCCACGCCCGAGCATCTCA
CTGACCGCTATTTCTGGTCCATCCCCGAGGAGGAATTTCTCTGTGAGCCCCCGCTCATCACACG
ACAGGCAGGCGGCCGGGCCCTAGTTGTGGAGGGCCAGGCTGTCAGTCTGCGCTGCCGGGCGGTG
GGTGACCCAGAGCCCGTGGTGCATTGGGTGGCACCGGATGGGCGGCTGCTGGGGAACTCCAGCC
GGACTCGGGTCCGTGGTGACGGAACGCTGGATGTGACTATCACCACCCTGAGGGACAGCGGTAC
CTTCACTTGCATAGCCTCCAATGCTGCAGGGGAAGCCACTGCACCTGTGGAGGTATGTGTGGTG
CCTCTGCCACTCATGGCGCCCCCACCTGCTGCCCCGCCGCCTCTCACTGAACCTGGTTCTTCTG
ACATCGCCACACCGGGCAGACCTGGTGCCAACGACTCAGCCACTGAGCGCAGGCTTGTGGCTGC
TGAACTTACGTCCAGCTCTGTGCTCATCCGCTGGCCGGCCCAGAGGCCAGTGCCTGGCATCCGC
ATGTACCAAGTGCAATACAACAGCTCTGCGGATGACTCCCTAGTCTACAGGATGATCCCTTCTA
CCAGCCAGACCTTCCTGGTGAATGATTTGGCGGCTGGCCGCGCCTATGATTTGTGTGTGTTGGC
AGTCTACGACGATGGGGCCACCGCTCTGCCGGCCACCAGAGTGGTGGGCTGTGTGCAATTCACC
ACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGCCCACTTCTTGGGCGGCACCATGATCA
TCGCCATCGGGGGCGTCATCGTAGCCTCGGTCCTCGTTTTCATCGTTCTGCTCATGATTCGCTA
CAAAGTGTATGGCGATGGGGACAGCCGCCGCATCAAGGGGACGTCCAGATCGCCCCCTCGGGTC
AGCCACGTGTGCTCTCAGACCAATGGTTCAAGTGCACAGCAAGCCTCCGCCCCACCAGCTCCAG
ACCGCTACGAGGCGCTGCGGGAGGTGGCTGTCCCTGCAGCCATCGAGGCAAAGGCCATGGAGGC
CGAGGCGACTTCCACTGAGCTAGAGGTGGTGCTTGGACGCTCTCTGGGTGGCTCGGCCACCTCT
CTGTGCTTGCTGCCCTCCGAGGAAACTTCAGGGGAGGAATCTAGGGCCGTAACCGGCCCTCGAA
GGAGCCGTTCGGGGGCCTTGGGGCCTCCAACTTCAGCACCCCCAACGCTAGCTCTGGTTCGTGG
GGGATCCCCGGCCCGGCCGAGGCCACAACAACGCTATTCCTTTGATGGGGACTACGGGGCGCTG
TTCCAGAGTCACAGTTACCCGCGCCGCGCCCGGCGGACAAAGCGCCACCGGTCCACGCCCCACC
TGGACGGGGCTGGAGGGGGCGCGGCCGGGGAGGACGGAGACCTGGGGCTGGGCTCCGCCCGGGC
ACGCCTGGCCTTCACCAGCACCGAATGGATGCTGGAGAGTACGGTGTGAGCGGCGGGCGCACGG
GCACCGGGACGCCTGTGGGCCGCACTTAGTTGCCCAGCCCGGCCGGATGCGGGGGAGGCTGGAG
AGAAGGGACGCGCGAGGGGCGGGGCCTACCGCAGTCAAGGCCACGCCCACCAGCCTCCGGATTG
GAGGAAGGCCGCCGGCCTCTCCGACTCCACCCCTCTGCCCTGTCCCCCGCGCGCTCGCGGACCT
CGCCGGAGCCGGTGCCTTACACAGCGAAGCGCGGGGAGGGGCGGGGCCCCCCCACACTGCAGCA
CTGAGACACGAGTCCCCTACCCTACCCGGGACCCTGGGGCAGGGGCGAGGGGCCCATTCCTTGT
ATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTCCCGTCCCCTCACCCA
GCCCCATCCCTGGTCCCACCAGTCTGGTTTGGAGGGAGGGGCTTCTTTTTTCTCTCTATGTCCT
AGTCTTTCCTGCCCTCTGTCGTCTGTTTTAAGTCCTTCCCTACTTGTCTCCCTTTTTTCTGTCC
CATTGTCGTCTCTTCTCCCTCTGCCCTCCCTTGTTTTTGGTTTTTTGTTTGTTTGTTTGTTTTT
TGTTTTGTCCAGTGTCCGTGTCTCTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCA
CTGAAGGACCAGACTCTTCTATCTTCCTTATCCCCACAATGAATTCCCCACACAAACAAAAACC
AAATCCCACTCCGGAGCCGGGACCCTCCGCCGCAGCAGAATTAAACTTTTTTCTGTGTCTGA

hide sequence

RefSeq Acc Id:

XM_006228628 ⟹ XP_006228690

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,873,147 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,745,594 - 83,761,450 (+)	NCBI
Rnor_6.0	1	85,290,887 - 85,306,746 (-)	NCBI
Rnor_5.0	1	86,506,887 - 86,524,071 (-)	NCBI

Sequence:

show sequence

GGGTTGGAGAGTGGAGGGTGGGGTTGAAGACCTGGCTCTTCCCACCCCACCCCACCCTAACTCC
CCCACCTGCCGGGTATCTGCAGATAGCGCCCCAGTTGCCTATATCTTGCTGGTAAGGCTGGGGA
AACTCTGGGGATGGCTGGTGGCAGAATCTTGTTGGAACCCGGCTTTGGAGACTCAATTCCTTCC
TGATGGAGTCCCACCTGCTGAACTATGACCTTTGGCCCTGGCTTGTGCCTGATTCTTTTTGGGG
AAGGGTGTAACAGGGACTGGAGGGGGTGTTAGAATGTATTTGGCTTGGGAAGTAGGTGGGGCAG
GAGTGCCAGGGCCATGAGGGATAGGTATCAGTGACTGTGAGTGTGAATCTAGCTGGTCTGTTGA
CTGTGCTCTGTGCTTTGCTATTTTGTGTGCATTTACAAGTGAGTTGGTTCCTCATGGGACTGTG
GCCTGAGTGTATCTGTGATGCATGAGCCTCTTAGAGCGCTTACAAAGTGCCTGTGTGCTTGTTC
ATGGCTCCCCGCTTTGTCAGCGTGTGTCCGCGCTAGGGGATCTGTGTCCATGTGTAAGGTATGT
GTGTACCAGCTGTGCGTGCGTGTGTTTGTTGGTGCTTTATCTGCTCTATGGCTGCCAGTGGGAA
CACGTGAAGTGGCACGGATGCGTTTCGGTGTGTGAGTGTGCACCTATGTATCTTTCATTGTGCA
GGTACCGGCCCAGGCCCTGACTCCTTGAAGAGAGATGAAGAAACCGAGATTCAGAGAGGTTCAG
ACACTTGCCCGAGGTCACACAGCTAGTCTCTCCCACTCCTCCTGCCTCCCCCGTGCACCATGGC
TCCAGGCCCCTTCTCCTCCGGGCTCCTCTCGCCACCACCTGCTGCTCTCCCTTTTCTGCTGCTG
CTCTGGGCAGGAGCATCTCGTGGCCAGCCCTGCCCCGGTCGCTGCATCTGTCAGAACGTGGCAC
CTACACTGACCATGCTGTGTGCCAAGACCGGCCTGCTCTTCGTGCCACCCGCCATCGACAGGCG
TGTGGTAGAGCTGCGGCTCACTGACAACTTCATTGCGGCTGTGCGTCGTCGAGACTTCGCCAAT
ATGACCAGCCTGGTCCACCTCACCCTGTCTCGAAACACCATTGGCCAGGTAGCAGCTGGCGCCT
TTGCTGACCTCCGTGCTCTCCGGGCCCTGCATCTTGACAGCAATCGTCTTGCAGAAGTGCGAGG
GGACCAGCTCCGGGGCTTGGGTAACCTCCGCCACTTGATCCTTGGCAACAATCAGATCCGTAAG
GTGGAGTCGGCAGCCTTTGACGCTTTCCTGTCCACCGTGGAGGACCTGGATCTATCCTACAACA
ACCTGGAGGCACTGCCATGGGAGGCGGTGGGTCAGATGGTGAACTTGAACACCCTCACGCTGGA
CCACAACCTCATTGATCACATTGCGGAGGGCACCTTCGTGCAGCTGCACAAACTCGTGCGCTTG
GACATGACCTCTAACCGCCTACATAAACTGCCCCCCGACGGACTGTTCCTGAGGTCCCAGGGCG
GTGGGCCCAAGCCACCTACCCCACTGACCGTCAGCTTCGGTGGCAACCCGCTGCACTGCAACTG
TGAACTGCTCTGGCTTCGGCGCCTGACCAGGGAGGATGACTTGGAGACATGTGCCACGCCCGAG
CATCTCACTGACCGCTATTTCTGGTCCATCCCCGAGGAGGAATTTCTCTGTGAGCCCCCGCTCA
TCACACGACAGGCAGGCGGCCGGGCCCTAGTTGTGGAGGGCCAGGCTGTCAGTCTGCGCTGCCG
GGCGGTGGGTGACCCAGAGCCCGTGGTGCATTGGGTGGCACCGGATGGGCGGCTGCTGGGGAAC
TCCAGCCGGACTCGGGTCCGTGGTGACGGAACGCTGGATGTGACTATCACCACCCTGAGGGACA
GCGGTACCTTCACTTGCATAGCCTCCAATGCTGCAGGGGAAGCCACTGCACCTGTGGAGGTATG
TGTGGTGCCTCTGCCACTCATGGCGCCCCCACCTGCTGCCCCGCCGCCTCTCACTGAACCTGGT
TCTTCTGACATCGCCACACCGGGCAGACCTGGTGCCAACGACTCAGCCACTGAGCGCAGGCTTG
TGGCTGCTGAACTTACGTCCAGCTCTGTGCTCATCCGCTGGCCGGCCCAGAGGCCAGTGCCTGG
CATCCGCATGTACCAAGTGCAATACAACAGCTCTGCGGATGACTCCCTAGTCTACAGGATGATC
CCTTCTACCAGCCAGACCTTCCTGGTGAATGATTTGGCGGCTGGCCGCGCCTATGATTTGTGTG
TGTTGGCAGTCTACGACGATGGGGCCACCGCTCTGCCGGCCACCAGAGTGGTGGGCTGTGTGCA
ATTCACCACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGCCCACTTCTTGGGCGGCACC
ATGATCATCGCCATCGGGGGCGTCATCGTAGCCTCGGTCCTCGTTTTCATCGTTCTGCTCATGA
TTCGCTACAAAGTGTATGGCGATGGGGACAGCCGCCGCATCAAGGGGACGTCCAGATCGCCCCC
TCGGGTCAGCCACGTGTGCTCTCAGACCAATGGTTCAAGTGCACAGCAAGCCTCCGCCCCACCA
GCTCCAGACCGCTACGAGGCGCTGCGGGAGGTGGCTGTCCCTGCAGCCATCGAGGCAAAGGCCA
TGGAGGCCGAGGCGACTTCCACTGAGCTAGAGGTGGTGCTTGGACGCTCTCTGGGTGGCTCGGC
CACCTCTCTGTGCTTGCTGCCCTCCGAGGAAACTTCAGGGGAGGAATCTAGGGCCGTAACCGGC
CCTCGAAGGAGCCGTTCGGGGGCCTTGGGGCCTCCAACTTCAGCACCCCCAACGCTAGCTCTGG
TTCGTGGGGGATCCCCGGCCCGGCCGAGGCCACAACAACGCTATTCCTTTGATGGGGACTACGG
GGCGCTGTTCCAGAGTCACAGTTACCCGCGCCGCGCCCGGCGGACAAAGCGCCACCGGTCCACG
CCCCACCTGGACGGGGCTGGAGGGGGCGCGGCCGGGGAGGACGGAGACCTGGGGCTGGGCTCCG
CCCGGGCACGCCTGGCCTTCACCAGCACCGAATGGATGCTGGAGAGTACGGTGTGAGCGGCGGG
CGCACGGGCACCGGGACGCCTGTGGGCCGCACTTAGTTGCCCAGCCCGGCCGGATGCGGGGGAG
GCTGGAGAGAAGGGACGCGCGAGGGGCGGGGCCTACCGCAGTCAAGGCCACGCCCACCAGCCTC
CGGATTGGAGGAAGGCCGCCGGCCTCTCCGACTCCACCCCTCTGCCCTGTCCCCCGCGCGCTCG
CGGACCTCGCCGGAGCCGGTGCCTTACACAGCGAAGCGCGGGGAGGGGCGGGGCCCCCCCACAC
TGCAGCACTGAGACACGAGTCCCCTACCCTACCCGGGACCCTGGGGCAGGGGCGAGGGGCCCAT
TCCTTGTATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTCCCGTCCCC
TCACCCAGCCCCATCCCTGGTCCCACCAGTCTGGTTTGGAGGGAGGGGCTTCTTTTTTCTCTCT
ATGTCCTAGTCTTTCCTGCCCTCTGTCGTCTGTTTTAAGTCCTTCCCTACTTGTCTCCCTTTTT
TCTGTCCCATTGTCGTCTCTTCTCCCTCTGCCCTCCCTTGTTTTTGGTTTTTTGTTTGTTTGTT
TGTTTTTTGTTTTGTCCAGTGTCCGTGTCTCTCCCGATTCCCTGTCCTCACCATCTTCCGGGCA
GGTCCCACTGAAGGACCAGACTCTTCTATCTTCCTTATCCCCACAATGAATTCCCCACACAAAC
AAAAACCAAATCCCACTCCGGAGCCGGGACCCTCCGCCGCAGCAGAATTAAACTTTTTTCTGTG
TCTGA

hide sequence

RefSeq Acc Id:

XM_008759174 ⟹ XP_008757396

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,866,864 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,742,442 - 83,761,450 (+)	NCBI
Rnor_6.0	1	85,290,887 - 85,308,498 (-)	NCBI

Sequence:

show sequence

ACACTAGGGATCTGGGGACTGCGATAAGATAGATACTGATTTTTTTTCCTTTTTTTCTTTTAGT
TCTCGCCACTATGAGTTTTATGGGCAGGCGTTGACACCAGAGCAGAGTGCACGGCGCCATGCCT
TGGAAAATTGAGGAAGTCAAGGACTTTCTGCTCACAGCCTGGCAGAGAGATGCCACATCTGTCA
AGATCAAGAAGACCAAGGATCATGTGAATGAAGTTCAAGGCTCACTGCAGCAGATACCTCTACA
CTGTGGTCACCACAGACAAGGAGAAGGCAGAGAAGCTGAAACAGTCTCTACAGATTGACAGTGA
AGAAGCTGAACTGAACCAGAGCTCTGCATTTGACTTTTAAAAACCCTGAGAAGCAATATATATA
TGGCCTTGCAGAGTTTGGGGGCCCAGCGTGTATGTCAGAAAGAGACGGAACATGGCCTGAGACA
CCCAGTGGACTCTGAGGACAGGGCGGGAGGTCAGCTCTGGGGTAGGAGTTGGATACTGAAGGTC
CAAAGGAGTAAGCAAGGTACCGGCCCAGGCCCTGACTCCTTGAAGAGAGCACTTGCAGGTCAGC
AAGAGGGTTTAGCAGGTAAAGGAGCTTGCCGCACAAGCCCAGCAGCCCAAGTTCGATTCCTGGA
AGCCACATGAAGATGAAGAAACCGAGATTCAGAGAGGTTCAGACACTTGCCCGAGGTCACACAG
CTAGTCTCTCCCACTCCTCCTGCCTCCCCCGTGCACCATGGCTCCAGGCCCCTTCTCCTCCGGG
CTCCTCTCGCCACCACCTGCTGCTCTCCCTTTTCTGCTGCTGCTCTGGGCAGGAGCATCTCGTG
GCCAGCCCTGCCCCGGTCGCTGCATCTGTCAGAACGTGGCACCTACACTGACCATGCTGTGTGC
CAAGACCGGCCTGCTCTTCGTGCCACCCGCCATCGACAGGCGTGTGGTAGAGCTGCGGCTCACT
GACAACTTCATTGCGGCTGTGCGTCGTCGAGACTTCGCCAATATGACCAGCCTGGTCCACCTCA
CCCTGTCTCGAAACACCATTGGCCAGGTAGCAGCTGGCGCCTTTGCTGACCTCCGTGCTCTCCG
GGCCCTGCATCTTGACAGCAATCGTCTTGCAGAAGTGCGAGGGGACCAGCTCCGGGGCTTGGGT
AACCTCCGCCACTTGATCCTTGGCAACAATCAGATCCGTAAGGTGGAGTCGGCAGCCTTTGACG
CTTTCCTGTCCACCGTGGAGGACCTGGATCTATCCTACAACAACCTGGAGGCACTGCCATGGGA
GGCGGTGGGTCAGATGGTGAACTTGAACACCCTCACGCTGGACCACAACCTCATTGATCACATT
GCGGAGGGCACCTTCGTGCAGCTGCACAAACTCGTGCGCTTGGACATGACCTCTAACCGCCTAC
ATAAACTGCCCCCCGACGGACTGTTCCTGAGGTCCCAGGGCGGTGGGCCCAAGCCACCTACCCC
ACTGACCGTCAGCTTCGGTGGCAACCCGCTGCACTGCAACTGTGAACTGCTCTGGCTTCGGCGC
CTGACCAGGGAGGATGACTTGGAGACATGTGCCACGCCCGAGCATCTCACTGACCGCTATTTCT
GGTCCATCCCCGAGGAGGAATTTCTCTGTGAGCCCCCGCTCATCACACGACAGGCAGGCGGCCG
GGCCCTAGTTGTGGAGGGCCAGGCTGTCAGTCTGCGCTGCCGGGCGGTGGGTGACCCAGAGCCC
GTGGTGCATTGGGTGGCACCGGATGGGCGGCTGCTGGGGAACTCCAGCCGGACTCGGGTCCGTG
GTGACGGAACGCTGGATGTGACTATCACCACCCTGAGGGACAGCGGTACCTTCACTTGCATAGC
CTCCAATGCTGCAGGGGAAGCCACTGCACCTGTGGAGGTATGTGTGGTGCCTCTGCCACTCATG
GCGCCCCCACCTGCTGCCCCGCCGCCTCTCACTGAACCTGGTTCTTCTGACATCGCCACACCGG
GCAGACCTGGTGCCAACGACTCAGCCACTGAGCGCAGGCTTGTGGCTGCTGAACTTACGTCCAG
CTCTGTGCTCATCCGCTGGCCGGCCCAGAGGCCAGTGCCTGGCATCCGCATGTACCAAGTGCAA
TACAACAGCTCTGCGGATGACTCCCTAGTCTACAGGATGATCCCTTCTACCAGCCAGACCTTCC
TGGTGAATGATTTGGCGGCTGGCCGCGCCTATGATTTGTGTGTGTTGGCAGTCTACGACGATGG
GGCCACCGCTCTGCCGGCCACCAGAGTGGTGGGCTGTGTGCAATTCACCACCGCGGGAGATCCT
GCACCATGCCGCCCGCTGAGGGCCCACTTCTTGGGCGGCACCATGATCATCGCCATCGGGGGCG
TCATCGTAGCCTCGGTCCTCGTTTTCATCGTTCTGCTCATGATTCGCTACAAAGTGTATGGCGA
TGGGGACAGCCGCCGCATCAAGGGGACGTCCAGATCGCCCCCTCGGGTCAGCCACGTGTGCTCT
CAGACCAATGGTTCAAGTGCACAGCAAGCCTCCGCCCCACCAGCTCCAGACCGCTACGAGGCGC
TGCGGGAGGTGGCTGTCCCTGCAGCCATCGAGGCAAAGGCCATGGAGGCCGAGGCGACTTCCAC
TGAGCTAGAGGTGGTGCTTGGACGCTCTCTGGGTGGCTCGGCCACCTCTCTGTGCTTGCTGCCC
TCCGAGGAAACTTCAGGGGAGGAATCTAGGGCCGTAACCGGCCCTCGAAGGAGCCGTTCGGGGG
CCTTGGGGCCTCCAACTTCAGCACCCCCAACGCTAGCTCTGGTTCGTGGGGGATCCCCGGCCCG
GCCGAGGCCACAACAACGCTATTCCTTTGATGGGGACTACGGGGCGCTGTTCCAGAGTCACAGT
TACCCGCGCCGCGCCCGGCGGACAAAGCGCCACCGGTCCACGCCCCACCTGGACGGGGCTGGAG
GGGGCGCGGCCGGGGAGGACGGAGACCTGGGGCTGGGCTCCGCCCGGGCACGCCTGGCCTTCAC
CAGCACCGAATGGATGCTGGAGAGTACGGTGTGAGCGGCGGGCGCACGGGCACCGGGACGCCTG
TGGGCCGCACTTAGTTGCCCAGCCCGGCCGGATGCGGGGGAGGCTGGAGAGAAGGGACGCGCGA
GGGGCGGGGCCTACCGCAGTCAAGGCCACGCCCACCAGCCTCCGGATTGGAGGAAGGCCGCCGG
CCTCTCCGACTCCACCCCTCTGCCCTGTCCCCCGCGCGCTCGCGGACCTCGCCGGAGCCGGTGC
CTTACACAGCGAAGCGCGGGGAGGGGCGGGGCCCCCCCACACTGCAGCACTGAGACACGAGTCC
CCTACCCTACCCGGGACCCTGGGGCAGGGGCGAGGGGCCCATTCCTTGTATCTGGCTGGACTAG
ATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTCCCGTCCCCTCACCCAGCCCCATCCCTGGTC
CCACCAGTCTGGTTTGGAGGGAGGGGCTTCTTTTTTCTCTCTATGTCCTAGTCTTTCCTGCCCT
CTGTCGTCTGTTTTAAGTCCTTCCCTACTTGTCTCCCTTTTTTCTGTCCCATTGTCGTCTCTTC
TCCCTCTGCCCTCCCTTGTTTTTGGTTTTTTGTTTGTTTGTTTGTTTTTTGTTTTGTCCAGTGT
CCGTGTCTCTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACTGAAGGACCAGACT
CTTCTATCTTCCTTATCCCCACAATGAATTCCCCACACAAACAAAAACCAAATCCCACTCCGGA
GCCGGGACCCTCCGCCGCAGCAGAATTAAACTTTTTTCTGTGTCTGA

hide sequence

RefSeq Acc Id:

XM_017589471 ⟹ XP_017444960

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,873,857 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,746,313 - 83,761,450 (+)	NCBI
Rnor_6.0	1	85,290,887 - 85,306,746 (-)	NCBI

Sequence:

show sequence

GGGTTGGAGAGTGGAGGGTGGGGTTGAAGACCTGGCTCTTCCCACCCCACCCCACCCTAACTCC
CCCACCTGCCGGGTATCTGCAGATAGCGCCCCAGTTGCCTATATCTTGCTGGTAAGGCTGGGGA
AACTCTGGGGATGGCTGGTGGCAGAATCTTGTTGGAACCCGGCTTTGGAGACTCAATTCCTTCC
TGATGGAGTCCCACCTGCTGAACTATGACCTTTGGCCCTGGCTTGTGCCTGATTCTTTTTGGGG
AAGGGTGTAACAGGGACTGGAGGGGGTGTTAGAATGTATTTGGCTTGGGAAGTAGGTGGGGCAG
GAGTGCCAGGGCCATGAGGGATAGGTATCAGTGACTGTGAGTGTGAATCTAGCTGGTCTGTTGA
CTGTGCTCTGTGCTTTGCTATTTTGTGTGCATTTACAAGTGAGTTGGTTCCTCATGGGACTGTG
GCCTGAGTGTATCTGTGATGCATGAGCCTCTTAGAGCGCTTACAAAGTGCCTGTGTGCTTGTTC
ATGGCTCCCCGCTTTGTCAGCGTGTGTCCGCGCTAGGGGATCTGTGTCCATGTGTAAGGTATGT
GTGTACCAGCTGTGCGTGCGTGTGTTTGTTGGTGCTTTATCTGCTCTATGGCTGCCAGTGGGAA
CACGTGAAGTGGCACGGATGCGTTTCGGTGTGTGAGTGTGCACCTATGTATCTTTCATTGTGCA
GGTGAGTCTTACATGTGTGAGCCACTGTGTGTTGACAAGTGTGCAAGGACTATATAGATGTAGG
TGTCTGGTTGTCTATTATGGGGTGCGTGGGTTTTTCTGTATCTGCACATCTGTGAGTGTGCAAC
GGATATCGTGTGTGTGTGTGTGCGCGTGCGTGTGCGTGTGTGTGTGTGTGTGTGGTGTATGCAG
ATACGTCAGCCTTGAGAGTGTGTGTCTATCTTGGGTGTCCTTTCCTACTTTAGTCTCTGGGGAC
CAGGCTCTGTATGTTTACACATGTATCTGCAAGACACACGTGTACTGGGCCTTGGGCACAAGAC
TGGCCCTACTTCTGGGTCTAGTGAGTGTGATCTGTAGCACGCCAAGGCATAGTGCGTGGTCCTG
GACACAAATGTAACCGTATCCTGGGCTCAGTGTCCTGAAGGGTAGGGAGCACCCATACTGGGCT
GATGTTCCCTGGTAGAGCTTGGGTTGGGACTCACGTAGATCGGGAGAGATCCACCAGTGTGTAT
GTGCATGGAGAGGAGACGGTAGCATAGGAACCCTAGTGCTTCTGGGCTCTGGATCCCGCTCATG
ACTTTGGAGTTGGGGAGCCCAGACGAGAACTCTTGAGTTGTAAAGGAAGAGGTGTCTGCTCCAT
ACATCTGAGTCTCAAGAGGAGAAGGCTGGCATTGAGAATTCTAGAGCTGCTAAGAAGAGTGGGT
ACCGGCCCAGGCCCTGACTCCTTGAAGAGAGATGAAGAAACCGAGATTCAGAGAGGTTCAGACA
CTTGCCCGAGGTCACACAGCTAGTCTCTCCCACTCCTCCTGCCTCCCCCGTGCACCATGGCTCC
AGGCCCCTTCTCCTCCGGGCTCCTCTCGCCACCACCTGCTGCTCTCCCTTTTCTGCTGCTGCTC
TGGGCAGGAGCATCTCGTGGCCAGCCCTGCCCCGGTCGCTGCATCTGTCAGAACGTGGCACCTA
CACTGACCATGCTGTGTGCCAAGACCGGCCTGCTCTTCGTGCCACCCGCCATCGACAGGCGTGT
GGTAGAGCTGCGGCTCACTGACAACTTCATTGCGGCTGTGCGTCGTCGAGACTTCGCCAATATG
ACCAGCCTGGTCCACCTCACCCTGTCTCGAAACACCATTGGCCAGGTAGCAGCTGGCGCCTTTG
CTGACCTCCGTGCTCTCCGGGCCCTGCATCTTGACAGCAATCGTCTTGCAGAAGTGCGAGGGGA
CCAGCTCCGGGGCTTGGGTAACCTCCGCCACTTGATCCTTGGCAACAATCAGATCCGTAAGGTG
GAGTCGGCAGCCTTTGACGCTTTCCTGTCCACCGTGGAGGACCTGGATCTATCCTACAACAACC
TGGAGGCACTGCCATGGGAGGCGGTGGGTCAGATGGTGAACTTGAACACCCTCACGCTGGACCA
CAACCTCATTGATCACATTGCGGAGGGCACCTTCGTGCAGCTGCACAAACTCGTGCGCTTGGAC
ATGACCTCTAACCGCCTACATAAACTGCCCCCCGACGGACTGTTCCTGAGGTCCCAGGGCGGTG
GGCCCAAGCCACCTACCCCACTGACCGTCAGCTTCGGTGGCAACCCGCTGCACTGCAACTGTGA
ACTGCTCTGGCTTCGGCGCCTGACCAGGGAGGATGACTTGGAGACATGTGCCACGCCCGAGCAT
CTCACTGACCGCTATTTCTGGTCCATCCCCGAGGAGGAATTTCTCTGTGAGCCCCCGCTCATCA
CACGACAGGCAGGCGGCCGGGCCCTAGTTGTGGAGGGCCAGGCTGTCAGTCTGCGCTGCCGGGC
GGTGGGTGACCCAGAGCCCGTGGTGCATTGGGTGGCACCGGATGGGCGGCTGCTGGGGAACTCC
AGCCGGACTCGGGTCCGTGGTGACGGAACGCTGGATGTGACTATCACCACCCTGAGGGACAGCG
GTACCTTCACTTGCATAGCCTCCAATGCTGCAGGGGAAGCCACTGCACCTGTGGAGGTATGTGT
GGTGCCTCTGCCACTCATGGCGCCCCCACCTGCTGCCCCGCCGCCTCTCACTGAACCTGGTTCT
TCTGACATCGCCACACCGGGCAGACCTGGTGCCAACGACTCAGCCACTGAGCGCAGGCTTGTGG
CTGCTGAACTTACGTCCAGCTCTGTGCTCATCCGCTGGCCGGCCCAGAGGCCAGTGCCTGGCAT
CCGCATGTACCAAGTGCAATACAACAGCTCTGCGGATGACTCCCTAGTCTACAGGATGATCCCT
TCTACCAGCCAGACCTTCCTGGTGAATGATTTGGCGGCTGGCCGCGCCTATGATTTGTGTGTGT
TGGCAGTCTACGACGATGGGGCCACCGCTCTGCCGGCCACCAGAGTGGTGGGCTGTGTGCAATT
CACCACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGCCCACTTCTTGGGCGGCACCATG
ATCATCGCCATCGGGGGCGTCATCGTAGCCTCGGTCCTCGTTTTCATCGTTCTGCTCATGATTC
GCTACAAAGTGTATGGCGATGGGGACAGCCGCCGCATCAAGGGGACGTCCAGATCGCCCCCTCG
GGTCAGCCACGTGTGCTCTCAGACCAATGGTTCAAGTGCACAGCAAGCCTCCGCCCCACCAGCT
CCAGACCGCTACGAGGCGCTGCGGGAGGTGGCTGTCCCTGCAGCCATCGAGGCAAAGGCCATGG
AGGCCGAGGCGACTTCCACTGAGCTAGAGGTGGTGCTTGGACGCTCTCTGGGTGGCTCGGCCAC
CTCTCTGTGCTTGCTGCCCTCCGAGGAAACTTCAGGGGAGGAATCTAGGGCCGTAACCGGCCCT
CGAAGGAGCCGTTCGGGGGCCTTGGGGCCTCCAACTTCAGCACCCCCAACGCTAGCTCTGGTTC
GTGGGGGATCCCCGGCCCGGCCGAGGCCACAACAACGCTATTCCTTTGATGGGGACTACGGGGC
GCTGTTCCAGAGTCACAGTTACCCGCGCCGCGCCCGGCGGACAAAGCGCCACCGGTCCACGCCC
CACCTGGACGGGGCTGGAGGGGGCGCGGCCGGGGAGGACGGAGACCTGGGGCTGGGCTCCGCCC
GGGCACGCCTGGCCTTCACCAGCACCGAATGGATGCTGGAGAGTACGGTGTGAGCGGCGGGCGC
ACGGGCACCGGGACGCCTGTGGGCCGCACTTAGTTGCCCAGCCCGGCCGGATGCGGGGGAGGCT
GGAGAGAAGGGACGCGCGAGGGGCGGGGCCTACCGCAGTCAAGGCCACGCCCACCAGCCTCCGG
ATTGGAGGAAGGCCGCCGGCCTCTCCGACTCCACCCCTCTGCCCTGTCCCCCGCGCGCTCGCGG
ACCTCGCCGGAGCCGGTGCCTTACACAGCGAAGCGCGGGGAGGGGCGGGGCCCCCCCACACTGC
AGCACTGAGACACGAGTCCCCTACCCTACCCGGGACCCTGGGGCAGGGGCGAGGGGCCCATTCC
TTGTATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTCCCGTCCCCTCA
CCCAGCCCCATCCCTGGTCCCACCAGTCTGGTTTGGAGGGAGGGGCTTCTTTTTTCTCTCTATG
TCCTAGTCTTTCCTGCCCTCTGTCGTCTGTTTTAAGTCCTTCCCTACTTGTCTCCCTTTTTTCT
GTCCCATTGTCGTCTCTTCTCCCTCTGCCCTCCCTTGTTTTTGGTTTTTTGTTTGTTTGTTTGT
TTTTTGTTTTGTCCAGTGTCCGTGTCTCTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGT
CCCACTGAAGGACCAGACTCTTCTATCTTCCTTATCCCCACAATGAATTCCCCACACAAACAAA
AACCAAATCCCACTCCGGAGCCGGGACCCTCCGCCGCAGCAGAATTAAACTTTTTTCTGTGTCT
GA

hide sequence

RefSeq Acc Id:

XM_017589472 ⟹ XP_017444961

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,866,864 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,742,442 - 83,761,450 (+)	NCBI
Rnor_6.0	1	85,290,887 - 85,308,498 (-)	NCBI

Sequence:

show sequence

ACACTAGGGATCTGGGGACTGCGATAAGATAGATACTGATTTTTTTTCCTTTTTTTCTTTTAGT
TCTCGCCACTATGAGTTTTATGGGCAGGCGTTGACACCAGAGCAGAGTGCACGGCGCCATGCCT
TGGAAAATTGAGGAAGTCAAGGACTTTCTGCTCACAGCCTGGCAGAGAGATGCCACATCTGTCA
AGATCAAGAAGACCAAGGATCATGTGAATGAAGTTCAAGGCTCACTGCAGCAGATACCTCTACA
CTGTGGTCACCACAGACAAGGAGAAGGCAGAGAAGCTGAAACAGTCTCTACAGATTGACAGTGA
AGAAGCTGAACTGAACCAGAGCTCTGCATTTGACTTTTAAAAACCCTGAGAAGCAATATATATA
TGGCCTTGCAGAGTTTGGGGGCCCAGCGTGTATGTCAGAAAGAGACGGAACATGGCCTGAGACA
CCCAGTGGACTCTGAGGACAGGGCGGGAGGTCAGCTCTGGGGTAGGAGTTGGATACTGAAGGTC
CAAAGGAGTAAGCAAGGTACCGGCCCAGGCCCTGACTCCTTGAAGAGAGATGAAGAAACCGAGA
TTCAGAGAGGTTCAGACACTTGCCCGAGGTCACACAGCTAGTCTCTCCCACTCCTCCTGCCTCC
CCCGTGCACCATGGCTCCAGGCCCCTTCTCCTCCGGGCTCCTCTCGCCACCACCTGCTGCTCTC
CCTTTTCTGCTGCTGCTCTGGGCAGGAGCATCTCGTGGCCAGCCCTGCCCCGGTCGCTGCATCT
GTCAGAACGTGGCACCTACACTGACCATGCTGTGTGCCAAGACCGGCCTGCTCTTCGTGCCACC
CGCCATCGACAGGCGTGTGGTAGAGCTGCGGCTCACTGACAACTTCATTGCGGCTGTGCGTCGT
CGAGACTTCGCCAATATGACCAGCCTGGTCCACCTCACCCTGTCTCGAAACACCATTGGCCAGG
TAGCAGCTGGCGCCTTTGCTGACCTCCGTGCTCTCCGGGCCCTGCATCTTGACAGCAATCGTCT
TGCAGAAGTGCGAGGGGACCAGCTCCGGGGCTTGGGTAACCTCCGCCACTTGATCCTTGGCAAC
AATCAGATCCGTAAGGTGGAGTCGGCAGCCTTTGACGCTTTCCTGTCCACCGTGGAGGACCTGG
ATCTATCCTACAACAACCTGGAGGCACTGCCATGGGAGGCGGTGGGTCAGATGGTGAACTTGAA
CACCCTCACGCTGGACCACAACCTCATTGATCACATTGCGGAGGGCACCTTCGTGCAGCTGCAC
AAACTCGTGCGCTTGGACATGACCTCTAACCGCCTACATAAACTGCCCCCCGACGGACTGTTCC
TGAGGTCCCAGGGCGGTGGGCCCAAGCCACCTACCCCACTGACCGTCAGCTTCGGTGGCAACCC
GCTGCACTGCAACTGTGAACTGCTCTGGCTTCGGCGCCTGACCAGGGAGGATGACTTGGAGACA
TGTGCCACGCCCGAGCATCTCACTGACCGCTATTTCTGGTCCATCCCCGAGGAGGAATTTCTCT
GTGAGCCCCCGCTCATCACACGACAGGCAGGCGGCCGGGCCCTAGTTGTGGAGGGCCAGGCTGT
CAGTCTGCGCTGCCGGGCGGTGGGTGACCCAGAGCCCGTGGTGCATTGGGTGGCACCGGATGGG
CGGCTGCTGGGGAACTCCAGCCGGACTCGGGTCCGTGGTGACGGAACGCTGGATGTGACTATCA
CCACCCTGAGGGACAGCGGTACCTTCACTTGCATAGCCTCCAATGCTGCAGGGGAAGCCACTGC
ACCTGTGGAGGTATGTGTGGTGCCTCTGCCACTCATGGCGCCCCCACCTGCTGCCCCGCCGCCT
CTCACTGAACCTGGTTCTTCTGACATCGCCACACCGGGCAGACCTGGTGCCAACGACTCAGCCA
CTGAGCGCAGGCTTGTGGCTGCTGAACTTACGTCCAGCTCTGTGCTCATCCGCTGGCCGGCCCA
GAGGCCAGTGCCTGGCATCCGCATGTACCAAGTGCAATACAACAGCTCTGCGGATGACTCCCTA
GTCTACAGGATGATCCCTTCTACCAGCCAGACCTTCCTGGTGAATGATTTGGCGGCTGGCCGCG
CCTATGATTTGTGTGTGTTGGCAGTCTACGACGATGGGGCCACCGCTCTGCCGGCCACCAGAGT
GGTGGGCTGTGTGCAATTCACCACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGCCCAC
TTCTTGGGCGGCACCATGATCATCGCCATCGGGGGCGTCATCGTAGCCTCGGTCCTCGTTTTCA
TCGTTCTGCTCATGATTCGCTACAAAGTGTATGGCGATGGGGACAGCCGCCGCATCAAGGGGAC
GTCCAGATCGCCCCCTCGGGTCAGCCACGTGTGCTCTCAGACCAATGGTTCAAGTGCACAGCAA
GCCTCCGCCCCACCAGCTCCAGACCGCTACGAGGCGCTGCGGGAGGTGGCTGTCCCTGCAGCCA
TCGAGGCAAAGGCCATGGAGGCCGAGGCGACTTCCACTGAGCTAGAGGTGGTGCTTGGACGCTC
TCTGGGTGGCTCGGCCACCTCTCTGTGCTTGCTGCCCTCCGAGGAAACTTCAGGGGAGGAATCT
AGGGCCGTAACCGGCCCTCGAAGGAGCCGTTCGGGGGCCTTGGGGCCTCCAACTTCAGCACCCC
CAACGCTAGCTCTGGTTCGTGGGGGATCCCCGGCCCGGCCGAGGCCACAACAACGCTATTCCTT
TGATGGGGACTACGGGGCGCTGTTCCAGAGTCACAGTTACCCGCGCCGCGCCCGGCGGACAAAG
CGCCACCGGTCCACGCCCCACCTGGACGGGGCTGGAGGGGGCGCGGCCGGGGAGGACGGAGACC
TGGGGCTGGGCTCCGCCCGGGCACGCCTGGCCTTCACCAGCACCGAATGGATGCTGGAGAGTAC
GGTGTGAGCGGCGGGCGCACGGGCACCGGGACGCCTGTGGGCCGCACTTAGTTGCCCAGCCCGG
CCGGATGCGGGGGAGGCTGGAGAGAAGGGACGCGCGAGGGGCGGGGCCTACCGCAGTCAAGGCC
ACGCCCACCAGCCTCCGGATTGGAGGAAGGCCGCCGGCCTCTCCGACTCCACCCCTCTGCCCTG
TCCCCCGCGCGCTCGCGGACCTCGCCGGAGCCGGTGCCTTACACAGCGAAGCGCGGGGAGGGGC
GGGGCCCCCCCACACTGCAGCACTGAGACACGAGTCCCCTACCCTACCCGGGACCCTGGGGCAG
GGGCGAGGGGCCCATTCCTTGTATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCA
AAGCCTCCCGTCCCCTCACCCAGCCCCATCCCTGGTCCCACCAGTCTGGTTTGGAGGGAGGGGC
TTCTTTTTTCTCTCTATGTCCTAGTCTTTCCTGCCCTCTGTCGTCTGTTTTAAGTCCTTCCCTA
CTTGTCTCCCTTTTTTCTGTCCCATTGTCGTCTCTTCTCCCTCTGCCCTCCCTTGTTTTTGGTT
TTTTGTTTGTTTGTTTGTTTTTTGTTTTGTCCAGTGTCCGTGTCTCTCCCGATTCCCTGTCCTC
ACCATCTTCCGGGCAGGTCCCACTGAAGGACCAGACTCTTCTATCTTCCTTATCCCCACAATGA
ATTCCCCACACAAACAAAAACCAAATCCCACTCCGGAGCCGGGACCCTCCGCCGCAGCAGAATT
AAACTTTTTTCTGTGTCTGA

hide sequence

RefSeq Acc Id:

XM_017589473 ⟹ XP_017444962

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,871,348 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,743,803 - 83,761,450 (+)	NCBI
Rnor_6.0	1	85,290,887 - 85,307,334 (-)	NCBI

Sequence:

show sequence

AAGAGTAGAATAGTTCCTGGTTCCAGGTGGCTCTCCAACATGGTCTGAGGCTTCAAAGACCCGC
ACTTTGAGGATGTGATGGGGAGAGCAGCGGTACCGGCCCAGGCCCTGACTCCTTGAAGAGAGAT
GAAGAAACCGAGATTCAGAGAGGTTCAGACACTTGCCCGAGGTCACACAGCTAGTCTCTCCCAC
TCCTCCTGCCTCCCCCGTGCACCATGGCTCCAGGCCCCTTCTCCTCCGGGCTCCTCTCGCCACC
ACCTGCTGCTCTCCCTTTTCTGCTGCTGCTCTGGGCAGGAGCATCTCGTGGCCAGCCCTGCCCC
GGTCGCTGCATCTGTCAGAACGTGGCACCTACACTGACCATGCTGTGTGCCAAGACCGGCCTGC
TCTTCGTGCCACCCGCCATCGACAGGCGTGTGGTAGAGCTGCGGCTCACTGACAACTTCATTGC
GGCTGTGCGTCGTCGAGACTTCGCCAATATGACCAGCCTGGTCCACCTCACCCTGTCTCGAAAC
ACCATTGGCCAGGTAGCAGCTGGCGCCTTTGCTGACCTCCGTGCTCTCCGGGCCCTGCATCTTG
ACAGCAATCGTCTTGCAGAAGTGCGAGGGGACCAGCTCCGGGGCTTGGGTAACCTCCGCCACTT
GATCCTTGGCAACAATCAGATCCGTAAGGTGGAGTCGGCAGCCTTTGACGCTTTCCTGTCCACC
GTGGAGGACCTGGATCTATCCTACAACAACCTGGAGGCACTGCCATGGGAGGCGGTGGGTCAGA
TGGTGAACTTGAACACCCTCACGCTGGACCACAACCTCATTGATCACATTGCGGAGGGCACCTT
CGTGCAGCTGCACAAACTCGTGCGCTTGGACATGACCTCTAACCGCCTACATAAACTGCCCCCC
GACGGACTGTTCCTGAGGTCCCAGGGCGGTGGGCCCAAGCCACCTACCCCACTGACCGTCAGCT
TCGGTGGCAACCCGCTGCACTGCAACTGTGAACTGCTCTGGCTTCGGCGCCTGACCAGGGAGGA
TGACTTGGAGACATGTGCCACGCCCGAGCATCTCACTGACCGCTATTTCTGGTCCATCCCCGAG
GAGGAATTTCTCTGTGAGCCCCCGCTCATCACACGACAGGCAGGCGGCCGGGCCCTAGTTGTGG
AGGGCCAGGCTGTCAGTCTGCGCTGCCGGGCGGTGGGTGACCCAGAGCCCGTGGTGCATTGGGT
GGCACCGGATGGGCGGCTGCTGGGGAACTCCAGCCGGACTCGGGTCCGTGGTGACGGAACGCTG
GATGTGACTATCACCACCCTGAGGGACAGCGGTACCTTCACTTGCATAGCCTCCAATGCTGCAG
GGGAAGCCACTGCACCTGTGGAGGTATGTGTGGTGCCTCTGCCACTCATGGCGCCCCCACCTGC
TGCCCCGCCGCCTCTCACTGAACCTGGTTCTTCTGACATCGCCACACCGGGCAGACCTGGTGCC
AACGACTCAGCCACTGAGCGCAGGCTTGTGGCTGCTGAACTTACGTCCAGCTCTGTGCTCATCC
GCTGGCCGGCCCAGAGGCCAGTGCCTGGCATCCGCATGTACCAAGTGCAATACAACAGCTCTGC
GGATGACTCCCTAGTCTACAGGATGATCCCTTCTACCAGCCAGACCTTCCTGGTGAATGATTTG
GCGGCTGGCCGCGCCTATGATTTGTGTGTGTTGGCAGTCTACGACGATGGGGCCACCGCTCTGC
CGGCCACCAGAGTGGTGGGCTGTGTGCAATTCACCACCGCGGGAGATCCTGCACCATGCCGCCC
GCTGAGGGCCCACTTCTTGGGCGGCACCATGATCATCGCCATCGGGGGCGTCATCGTAGCCTCG
GTCCTCGTTTTCATCGTTCTGCTCATGATTCGCTACAAAGTGTATGGCGATGGGGACAGCCGCC
GCATCAAGGGGACGTCCAGATCGCCCCCTCGGGTCAGCCACGTGTGCTCTCAGACCAATGGTTC
AAGTGCACAGCAAGCCTCCGCCCCACCAGCTCCAGACCGCTACGAGGCGCTGCGGGAGGTGGCT
GTCCCTGCAGCCATCGAGGCAAAGGCCATGGAGGCCGAGGCGACTTCCACTGAGCTAGAGGTGG
TGCTTGGACGCTCTCTGGGTGGCTCGGCCACCTCTCTGTGCTTGCTGCCCTCCGAGGAAACTTC
AGGGGAGGAATCTAGGGCCGTAACCGGCCCTCGAAGGAGCCGTTCGGGGGCCTTGGGGCCTCCA
ACTTCAGCACCCCCAACGCTAGCTCTGGTTCGTGGGGGATCCCCGGCCCGGCCGAGGCCACAAC
AACGCTATTCCTTTGATGGGGACTACGGGGCGCTGTTCCAGAGTCACAGTTACCCGCGCCGCGC
CCGGCGGACAAAGCGCCACCGGTCCACGCCCCACCTGGACGGGGCTGGAGGGGGCGCGGCCGGG
GAGGACGGAGACCTGGGGCTGGGCTCCGCCCGGGCACGCCTGGCCTTCACCAGCACCGAATGGA
TGCTGGAGAGTACGGTGTGAGCGGCGGGCGCACGGGCACCGGGACGCCTGTGGGCCGCACTTAG
TTGCCCAGCCCGGCCGGATGCGGGGGAGGCTGGAGAGAAGGGACGCGCGAGGGGCGGGGCCTAC
CGCAGTCAAGGCCACGCCCACCAGCCTCCGGATTGGAGGAAGGCCGCCGGCCTCTCCGACTCCA
CCCCTCTGCCCTGTCCCCCGCGCGCTCGCGGACCTCGCCGGAGCCGGTGCCTTACACAGCGAAG
CGCGGGGAGGGGCGGGGCCCCCCCACACTGCAGCACTGAGACACGAGTCCCCTACCCTACCCGG
GACCCTGGGGCAGGGGCGAGGGGCCCATTCCTTGTATCTGGCTGGACTAGATCTCTTCTGCCCC
GCGGCGGCCTCCAAAGCCTCCCGTCCCCTCACCCAGCCCCATCCCTGGTCCCACCAGTCTGGTT
TGGAGGGAGGGGCTTCTTTTTTCTCTCTATGTCCTAGTCTTTCCTGCCCTCTGTCGTCTGTTTT
AAGTCCTTCCCTACTTGTCTCCCTTTTTTCTGTCCCATTGTCGTCTCTTCTCCCTCTGCCCTCC
CTTGTTTTTGGTTTTTTGTTTGTTTGTTTGTTTTTTGTTTTGTCCAGTGTCCGTGTCTCTCCCG
ATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACTGAAGGACCAGACTCTTCTATCTTCCTT
ATCCCCACAATGAATTCCCCACACAAACAAAAACCAAATCCCACTCCGGAGCCGGGACCCTCCG
CCGCAGCAGAATTAAACTTTTTTCTGTGTCTGA

hide sequence

RefSeq Acc Id:

XM_039084965 ⟹ XP_038940893

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,872,122 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,744,639 - 83,761,450 (+)	NCBI

RefSeq Acc Id:

XM_039084966 ⟹ XP_038940894

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,872,372 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,744,869 - 83,761,450 (+)	NCBI

RefSeq Acc Id:

XM_039084968 ⟹ XP_038940896

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,872,121 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,744,639 - 83,761,450 (+)	NCBI

RefSeq Acc Id:

XM_039084971 ⟹ XP_038940899

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,871,348 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,743,803 - 83,761,450 (+)	NCBI

RefSeq Acc Id:

XM_039084973 ⟹ XP_038940901

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,873,147 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,745,594 - 83,761,450 (+)	NCBI

RefSeq Acc Id:

XM_039084975 ⟹ XP_038940903

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	92,873,857 - 92,888,984 (+)	NCBI
mRatBN7.2	1	83,746,313 - 83,761,450 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001121166	(Get FASTA)	NCBI Sequence Viewer
	XP_006228688	(Get FASTA)	NCBI Sequence Viewer
	XP_006228690	(Get FASTA)	NCBI Sequence Viewer
	XP_008757396	(Get FASTA)	NCBI Sequence Viewer
	XP_017444960	(Get FASTA)	NCBI Sequence Viewer
	XP_017444961	(Get FASTA)	NCBI Sequence Viewer
	XP_017444962	(Get FASTA)	NCBI Sequence Viewer
	XP_038940893	(Get FASTA)	NCBI Sequence Viewer
	XP_038940894	(Get FASTA)	NCBI Sequence Viewer
	XP_038940896	(Get FASTA)	NCBI Sequence Viewer
	XP_038940899	(Get FASTA)	NCBI Sequence Viewer
	XP_038940901	(Get FASTA)	NCBI Sequence Viewer
	XP_038940903	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM07889	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000053905
	ENSRNOP00000053905.2
GenBank Protein	P0C7J6	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001121166 ⟸ NM_001127694
- Peptide Label:	precursor
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAPGPFSSGLLSPPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAID RRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEV RGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLT LDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLTVSFGGNPLHC NCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLR CRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVE VCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGANDSATERRLVAAELTSSSVLIRWPAQRPV PGIRMYQVQYNSSADDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALPATRVVGC VQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYGDGDSRRIKGTSRS PPRVSHVCSQTNGSSAQQASAPPAPDRYEALREVAVPAAIEAKAMEAEATSTELEVVLGRSLGG SATSLCLLPSEETSGEESRAVTGPRRSRSGALGPPTSAPPTLALVRGGSPARPRPQQRYSFDGD YGALFQSHSYPRRARRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV hide sequence

RefSeq Acc Id:	XP_006228690 ⟸ XM_006228628
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAPGPFSSGLLSPPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAID RRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEV RGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLT LDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLTVSFGGNPLHC NCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLR CRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVE VCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGANDSATERRLVAAELTSSSVLIRWPAQRPV PGIRMYQVQYNSSADDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALPATRVVGC VQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYGDGDSRRIKGTSRS PPRVSHVCSQTNGSSAQQASAPPAPDRYEALREVAVPAAIEAKAMEAEATSTELEVVLGRSLGG SATSLCLLPSEETSGEESRAVTGPRRSRSGALGPPTSAPPTLALVRGGSPARPRPQQRYSFDGD YGALFQSHSYPRRARRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV hide sequence

RefSeq Acc Id:	XP_006228688 ⟸ XM_006228626
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAPGPFSSGLLSPPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAID RRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEV RGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLT LDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLTVSFGGNPLHC NCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLR CRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVE VCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGANDSATERRLVAAELTSSSVLIRWPAQRPV PGIRMYQVQYNSSADDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALPATRVVGC VQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYGDGDSRRIKGTSRS PPRVSHVCSQTNGSSAQQASAPPAPDRYEALREVAVPAAIEAKAMEAEATSTELEVVLGRSLGG SATSLCLLPSEETSGEESRAVTGPRRSRSGALGPPTSAPPTLALVRGGSPARPRPQQRYSFDGD YGALFQSHSYPRRARRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV hide sequence

RefSeq Acc Id:	XP_008757396 ⟸ XM_008759174
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAPGPFSSGLLSPPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAID RRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEV RGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLT LDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLTVSFGGNPLHC NCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLR CRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVE VCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGANDSATERRLVAAELTSSSVLIRWPAQRPV PGIRMYQVQYNSSADDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALPATRVVGC VQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYGDGDSRRIKGTSRS PPRVSHVCSQTNGSSAQQASAPPAPDRYEALREVAVPAAIEAKAMEAEATSTELEVVLGRSLGG SATSLCLLPSEETSGEESRAVTGPRRSRSGALGPPTSAPPTLALVRGGSPARPRPQQRYSFDGD YGALFQSHSYPRRARRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV hide sequence

RefSeq Acc Id:	XP_017444961 ⟸ XM_017589472
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAPGPFSSGLLSPPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAID RRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEV RGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLT LDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLTVSFGGNPLHC NCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLR CRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVE VCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGANDSATERRLVAAELTSSSVLIRWPAQRPV PGIRMYQVQYNSSADDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALPATRVVGC VQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYGDGDSRRIKGTSRS PPRVSHVCSQTNGSSAQQASAPPAPDRYEALREVAVPAAIEAKAMEAEATSTELEVVLGRSLGG SATSLCLLPSEETSGEESRAVTGPRRSRSGALGPPTSAPPTLALVRGGSPARPRPQQRYSFDGD YGALFQSHSYPRRARRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV hide sequence

RefSeq Acc Id:	XP_017444962 ⟸ XM_017589473
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAPGPFSSGLLSPPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAID RRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEV RGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLT LDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLTVSFGGNPLHC NCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLR CRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVE VCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGANDSATERRLVAAELTSSSVLIRWPAQRPV PGIRMYQVQYNSSADDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALPATRVVGC VQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYGDGDSRRIKGTSRS PPRVSHVCSQTNGSSAQQASAPPAPDRYEALREVAVPAAIEAKAMEAEATSTELEVVLGRSLGG SATSLCLLPSEETSGEESRAVTGPRRSRSGALGPPTSAPPTLALVRGGSPARPRPQQRYSFDGD YGALFQSHSYPRRARRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV hide sequence

RefSeq Acc Id:	XP_017444960 ⟸ XM_017589471
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAPGPFSSGLLSPPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAID RRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEV RGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLT LDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLTVSFGGNPLHC NCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLR CRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVE VCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGANDSATERRLVAAELTSSSVLIRWPAQRPV PGIRMYQVQYNSSADDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALPATRVVGC VQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYGDGDSRRIKGTSRS PPRVSHVCSQTNGSSAQQASAPPAPDRYEALREVAVPAAIEAKAMEAEATSTELEVVLGRSLGG SATSLCLLPSEETSGEESRAVTGPRRSRSGALGPPTSAPPTLALVRGGSPARPRPQQRYSFDGD YGALFQSHSYPRRARRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV hide sequence

Ensembl Acc Id:

ENSRNOP00000053905 ⟸ ENSRNOT00000057073

Ensembl Acc Id:

ENSRNOP00000026900 ⟸ ENSRNOT00000026900

RefSeq Acc Id:	XP_038940899 ⟸ XM_039084971
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038940896 ⟸ XM_039084968
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038940893 ⟸ XM_039084965
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038940894 ⟸ XM_039084966
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038940901 ⟸ XM_039084973
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038940903 ⟸ XM_039084975
- Peptide Label:	isoform X1
- UniProtKB:	P0C7J6 (UniProtKB/Swiss-Prot)

Protein Domains

Fibronectin type-III Ig-like LRRCT LRRNT

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P0C7J6-F1-model_v2	AlphaFold	P0C7J6	1-766	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304707	AgrOrtholog
BioCyc Gene	G2FUF-60240	BioCyc
Ensembl Genes	ENSRNOG00000019869	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000057073	ENTREZGENE
	ENSRNOT00000057073.6	UniProtKB/Swiss-Prot
Gene3D-CATH	2.60.40.10	UniProtKB/Swiss-Prot
	3.80.10.10	UniProtKB/Swiss-Prot
InterPro	Cys-rich_flank_reg_C	UniProtKB/Swiss-Prot
	FN3_dom	UniProtKB/Swiss-Prot
	FN3_sf	UniProtKB/Swiss-Prot
	Ig-like_dom	UniProtKB/Swiss-Prot
	Ig-like_dom_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Ig_I-set	UniProtKB/Swiss-Prot
	Ig_sub	UniProtKB/Swiss-Prot
	Ig_sub2	UniProtKB/Swiss-Prot
	Leu-rich_rpt	UniProtKB/Swiss-Prot
	Leu-rich_rpt_typical-subtyp	UniProtKB/Swiss-Prot
	LRFN	UniProtKB/Swiss-Prot
	LRR_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:365222	UniProtKB/Swiss-Prot
NCBI Gene	365222	ENTREZGENE
PANTHER	LEUCINE-RICH REPEAT AND FIBRONECTIN TYPE III DOMAIN-CONTAINING PROTEIN 1	UniProtKB/Swiss-Prot
	SYNAPTIC ADHESION-LIKE MOLECULE SALM	UniProtKB/Swiss-Prot
Pfam	fn3	UniProtKB/Swiss-Prot
	I-set	UniProtKB/Swiss-Prot
	LRR_8	UniProtKB/Swiss-Prot
PhenoGen	Lrfn1	PhenoGen
PROSITE	FN3	UniProtKB/Swiss-Prot
	IG_LIKE	UniProtKB/Swiss-Prot
	LRR	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000019869	RatGTEx
SMART	IGc2	UniProtKB/Swiss-Prot
	LRR_TYP	UniProtKB/Swiss-Prot
	LRRCT	UniProtKB/Swiss-Prot
	SM00409	UniProtKB/Swiss-Prot
Superfamily-SCOP	L domain-like	UniProtKB/Swiss-Prot
	SSF48726	UniProtKB/Swiss-Prot
	SSF49265	UniProtKB/Swiss-Prot
UniProt	LRFN1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-07-29	Lrfn1	leucine rich repeat and fibronectin type III domain containing 1	LOC100911296	60S ribosomal protein L38-like	Data merged from RGD:6494044	737654	PROVISIONAL
2012-07-05	LOC100911296	60S ribosomal protein L38-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-04-30	Lrfn1	leucine rich repeat and fibronectin type III domain containing 1	Lrfn1_predicted	leucine rich repeat and fibronectin type III domain containing 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Lrfn1_predicted	leucine rich repeat and fibronectin type III domain containing 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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