Cops4 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 14 | 9,382,897 - 9,413,216 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 14 | 9,382,900 - 9,413,107 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 14 | 9,078,579 - 9,108,788 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 9,078,576 - 9,108,887 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 14 | 9,050,203 - 9,080,480 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 10,350,063 - 10,380,340 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 9,046,679 - 9,076,956 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 10,718,863 - 10,749,134 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 10,718,844 - 10,749,120 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 10,666,118 - 10,696,489 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 14 | 10,329,870 - 10,360,081 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 14 | 9,187,509 - 9,217,727 (-) | NCBI | | Celera | | | RGSC_v3.1 | 14 | 10,329,870 - 10,360,081 (-) | NCBI | | | | | Cytogenetic Map | 14 | p22 | NCBI | | | | |
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COPS4 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 4 | 83,035,183 - 83,075,818 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 83,034,447 - 83,075,818 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 4 | 83,956,336 - 83,996,971 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 84,175,263 - 84,215,995 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 84,313,417 - 84,354,149 | NCBI | | | | | Celera | 4 | 81,246,788 - 81,287,480 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q21.22 | NCBI | | | | | HuRef | 4 | 79,696,991 - 79,738,024 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 83,932,721 - 83,973,422 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 86,364,418 - 86,405,022 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Cops4 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 5 | 100,666,223 - 100,695,668 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 100,666,175 - 100,695,669 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 5 | 100,518,295 - 100,547,802 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 100,518,309 - 100,547,803 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 5 | 100,947,328 - 100,976,821 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 100,758,758 - 100,788,078 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 97,844,415 - 97,873,735 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | E4 | NCBI | | | | | cM Map | 5 | 48.49 | NCBI | | | | |
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Cops4 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955474 | 6,539,313 - 6,582,551 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955474 | 6,540,022 - 6,581,881 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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COPS4 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 3 | 46,997,314 - 47,039,384 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 47,186,479 - 47,228,019 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 41,129,731 - 41,171,150 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 46,980,585 - 47,022,117 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 46,980,585 - 47,022,117 (-) | Ensembl | | | panPan2 | panpan1.1 |
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COPS4 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 32 | 6,957,189 - 6,997,573 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 32 | 6,957,390 - 6,997,180 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 32 | 34,887,844 - 34,928,232 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 32 | 6,978,409 - 7,018,953 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 32 | 6,873,174 - 7,018,945 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 32 | 7,049,431 - 7,089,809 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 32 | 6,917,989 - 6,958,354 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 32 | 33,003,236 - 33,048,104 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Cops4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024405285 | 5,349,474 - 5,383,444 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936738 | 1,511,301 - 1,545,439 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936738 | 1,511,301 - 1,545,274 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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COPS4 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 8 | 135,280,506 - 135,314,460 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 135,280,475 - 135,314,393 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 144,575,339 - 144,609,232 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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COPS4 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 7 | 31,426,600 - 31,466,590 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 31,427,121 - 31,466,721 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666037 | 10,005,130 - 10,045,121 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cops4 (Heterocephalus glaber - naked mole-rat) |
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Cops4 (Rattus rattus - black rat) |
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