ONTOLOGY REPORT - ANNOTATIONS
Term: cell surface receptor signaling pathway via JAK-STAT
Accession: GO:0007259
browse the term
Definition: A cell surface receptor signaling pathway in which ligand binding causes the receptor to dimerize, bringing the receptor-associated JAKs into close proximity. The JAKs then phosphorylate and activate each other on tyrosine residues.This leads to the activation of associated STAT protein, causing the STATs to dissociate from the receptor, translocate to the nucleus. The pathway ends with regulation of target gene expression by STAT proteins.
Synonyms: exact_synonym: JAK-STAT signal transduction; receptor signaling pathway via JAK-STAT
narrow_synonym: JAK-STAT cascade
xref: Wikipedia:JAK-STAT_signaling_pathway
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Agap2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
acts_upstream_of
ISO
MGI:4439325 (PMID:20075866)
RGD
PMID:20075866
NCBI chr 7:62,897,282...62,914,295
Ensembl chr 7:62,897,282...62,914,295
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Ager
advanced glycosylation end product-specific receptor
IMP
RGD
PMID:11180401
RGD:1625349
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
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Clcf1
cardiotrophin-like cytokine factor 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:10500198)
GO_Central RGD
PMID:10500198
GO_REF:0000033
NCBI chr 1:201,507,763...201,517,607
Ensembl chr 1:201,507,859...201,517,605
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Cntf
ciliary neurotrophic factor
IDA
RGD
PMID:15342787
RGD:1358676
NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
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Csf2
colony stimulating factor 2
involved_in
ISO
(PMID:18692472)
RGD
PMID:18692472
NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
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Csf2ra
colony stimulating factor 2 receptor subunit alpha
involved_in
ISO
(PMID:18692472)
RGD
PMID:18692472
NCBI chr14:98,089...103,261
Ensembl chr14:89,172...103,128
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Csf2rb
colony stimulating factor 2 receptor subunit beta
involved_in
ISO
(PMID:18692472)
RGD
PMID:18692472
NCBI chr 7:109,876,919...109,901,589
Ensembl chr 7:109,886,425...109,904,157
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Ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component
involved_in
ISO
(MGI:5319608|PMID:17911113)
RGD
PMID:17911113
MGI:5319608
NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
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Dab1
DAB adaptor protein 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:1857750 (PMID:18848628)
Ensembl RGD
PMID:18848628
GO_REF:0000107
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
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Erbb4
erb-b2 receptor tyrosine kinase 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:5297795|PMID:10508857)
Ensembl RGD
PMID:10508857
GO_REF:0000107 MGI:5297795
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
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Fgfr3
fibroblast growth factor receptor 3
involved_in
ISO
(PMID:11294897)
RGD
PMID:11294897
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
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Gh1
growth hormone 1
involved_in
ISO
(PMID:8063815)
RGD
PMID:8063815
NCBI chr10:91,228,102...91,230,079
Ensembl chr10:91,228,103...91,230,078
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Ghr
growth hormone receptor
involved_in
IDA
PMID:8063815
BHF-UCL
PMID:8063815
RGD:8553732
NCBI chr 2:52,541,452...52,804,960
Ensembl chr 2:52,542,594...52,804,735
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Hamp
hepcidin antimicrobial peptide
acts_upstream_of_or_within
ISO
(PMID:20530874)
RGD
PMID:20530874
NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
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Ifnar1
interferon alpha and beta receptor subunit 1
involved_in
ISO
(PMID:7526154), (PMID:7657660), (PMID:7813427), (PMID:8605876)
RGD
PMID:7526154 PMID:7657660 PMID:7813427 PMID:8605876
NCBI chr11:30,725,774...30,752,227
Ensembl chr11:30,725,790...30,749,979
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Ifnar2
interferon alpha and beta receptor subunit 2
involved_in
ISO
(PMID:10556041), (PMID:7759950)
RGD
PMID:7759950 PMID:10556041
NCBI chr11:30,613,576...30,645,958
Ensembl chr11:30,613,767...30,668,124
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Ifnb1
interferon beta 1
acts_upstream_of involved_in
ISO
(PMID:7813427), (PMID:8027027), (PMID:8798579), (PMID:8969169) (PMID:10556041)
RGD
PMID:7813427 PMID:8027027 PMID:8798579 PMID:8969169 PMID:10556041
NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523
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Ifng
interferon gamma
involved_in
ISO
UniProtKB:Q62120 (MGI:5776417|PMID:26227742)
RGD
PMID:26227742
MGI:5776417
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
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Ifnl1
interferon, lambda 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 1:83,798,651...83,800,297
Ensembl chr 1:83,798,703...83,800,235
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Ifnl3
interferon, lambda 3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 1:83,814,456...83,816,096
Ensembl chr 1:83,814,564...83,816,096
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Il15ra
interleukin 15 receptor subunit alpha
IMP
RGD
PMID:19747902
RGD:5001122
NCBI chr17:66,802,300...66,831,973
Ensembl chr17:66,802,334...66,832,278
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Il31ra
interleukin 31 receptor A
involved_in
ISO
(PMID:11877449)
RGD
PMID:11877449
NCBI chr 2:44,118,748...44,189,943
Ensembl chr 2:44,122,624...44,183,767
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Insl3
insulin-like 3
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr16:18,398,682...18,400,566
Ensembl chr16:18,384,829...18,400,560
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Jak1
Janus kinase 1
involved_in
ISO IBA
(PMID:28111307), (PMID:32750333), (PMID:7657660), (PMID:8232552), (PMID:8272873) GO_REF:0000033
RGD GO_Central
PMID:7657660 PMID:8232552 PMID:8272873 PMID:28111307 PMID:32750333
GO_REF:0000033
NCBI chr 5:115,780,248...115,888,841
Ensembl chr 5:115,780,248...115,888,926
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Jak2
Janus kinase 2
acts_upstream_of_or_within involved_in
IDA ISO IBA
MGI:3045147 (PMID:11821424), (PMID:12147240), (PMID:15354294), (PMID:21606371) GO_REF:0000033 (PMID:18692472), (PMID:31145836) UniProtKB:P01580 (MGI:5776417|PMID:26227742)
RGD GO_Central
PMID:11821424 PMID:12147240 PMID:15354294 PMID:18692472 PMID:21606371 PMID:26227742 PMID:31145836 PMID:11064147 More...
GO_REF:0000033 MGI:5776417 , RGD:1624963
NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
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Jak3
Janus kinase 3
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
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Lep
leptin
TAS
RGD
PMID:12101402
RGD:625547
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
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Neurod1
neuronal differentiation 1
acts_upstream_of
ISO
(PMID:18848628)
RGD
PMID:18848628
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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Pkd1
polycystin 1, transient receptor potential channel interacting
involved_in acts_upstream_of_or_within
ISO
(MGI:2178492|PMID:12007403) (PMID:12007403)
RGD
PMID:12007403
MGI:2178492
NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128
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Pkd2
polycystin 2, transient receptor potential cation channel
involved_in acts_upstream_of_or_within
ISO
(MGI:2178492|PMID:12007403) (PMID:12007403)
RGD
PMID:12007403
MGI:2178492
NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
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Prlr
prolactin receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1888377 (PMID:16469767)
Ensembl RGD
PMID:16469767
GO_REF:0000107
NCBI chr 2:59,134,147...59,324,719
Ensembl chr 2:59,134,588...59,324,718
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Socs1
suppressor of cytokine signaling 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:11854514)
Ensembl RGD
PMID:11854514
GO_REF:0000107
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
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Socs2
suppressor of cytokine signaling 2
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:97763 (PMID:16469767)
Ensembl RGD
PMID:16469767
GO_REF:0000107
NCBI chr 7:30,006,360...30,045,161
Ensembl chr 7:30,008,578...30,043,548
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Socs3
suppressor of cytokine signaling 3
TAS IDA
RGD
PMID:12163036 PMID:12239110
RGD:625538 , RGD:625667
NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787
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Socs5
suppressor of cytokine signaling 5
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
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Stat1
signal transducer and activator of transcription 1
involved_in
TAS IBA ISO IMP
GO_REF:0000033 (PMID:11972023), (PMID:22002246), (PMID:28753426) (MGI:7327234|PMID:11972023)
GO_Central RGD
PMID:11972023 PMID:22002246 PMID:28753426 PMID:11024034 PMID:12191995
GO_REF:0000033 MGI:7327234 , RGD:1299057 , RGD:1299060
NCBI chr 9:49,419,561...49,459,969
Ensembl chr 9:49,419,340...49,588,540
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Stat2
signal transducer and activator of transcription 2
involved_in
ISO IBA
(PMID:23139419) GO_REF:0000033
RGD GO_Central
PMID:23139419
GO_REF:0000033
NCBI chr 7:702,565...718,349
Ensembl chr 7:702,495...718,967
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Stat3
signal transducer and activator of transcription 3
involved_in
TAS IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 (PMID:8272873)
GO_Central Ensembl RGD
PMID:8272873 PMID:8530402
GO_REF:0000033 GO_REF:0000107, RGD:730023
NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
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Stat4
signal transducer and activator of transcription 4
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 9:49,472,660...49,588,540
Ensembl chr 9:49,419,340...49,588,540
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Stat5a
signal transducer and activator of transcription 5A
acts_upstream_of_or_within involved_in
IDA ISO IBA IEA
(PMID:10485657) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:10485657 PMID:11064147
GO_REF:0000033 GO_REF:0000118, RGD:1624963
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
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Stat5b
signal transducer and activator of transcription 5B
acts_upstream_of_or_within involved_in
IDA ISO IBA IEA
(PMID:10485657) GO_REF:0000033 GO_REF:0000118 GO_REF:0000107
RGD GO_Central TreeGrafter Ensembl
PMID:10485657 PMID:11064147
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118, RGD:1624963
NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
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Stat6
signal transducer and activator of transcription 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495
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Tyk2
tyrosine kinase 2
involved_in
ISO
(PMID:7526154), (PMID:7657660), (PMID:8232552), (PMID:8605876)
RGD
PMID:7526154 PMID:7657660 PMID:8232552 PMID:8605876
NCBI chr 8:19,641,881...19,667,157
Ensembl chr 8:19,641,884...19,667,044
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Agtr1a
angiotensin II receptor, type 1a
IMP
RGD
PMID:9314843
RGD:6478796
NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
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Ghr
growth hormone receptor
IDA
RGD
PMID:11244571
RGD:1624962
NCBI chr 2:52,541,452...52,804,960
Ensembl chr 2:52,542,594...52,804,735
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Prl3d4
prolactin family 3, subfamily D, member 4
IMP
RGD
PMID:8822264
RGD:1298822
NCBI chr17:37,325,804...37,332,641
Ensembl chr17:37,325,806...37,332,667
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Ptk2b
protein tyrosine kinase 2 beta
IMP
RGD
PMID:11818507
RGD:633057
NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
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Hnf4a
hepatocyte nuclear factor 4, alpha
IDA
RGD
PMID:16584384
RGD:1625011
NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
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Gadd45a
growth arrest and DNA-damage-inducible, alpha
involved_in
IEA ISO
GO_REF:0000107 (MGI:6377865|PMID:23329839) (PMID:23329839)
Ensembl RGD
PMID:23329839
GO_REF:0000107 MGI:6377865
NCBI chr 4:96,154,789...96,157,091
Ensembl chr 4:96,154,789...96,157,115
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Ggnbp2
gametogenetin binding protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4072637 (PMID:26764350)
Ensembl RGD
PMID:26764350
GO_REF:0000107
NCBI chr10:69,711,527...69,743,134
Ensembl chr10:69,711,532...69,743,365
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Pwp1
PWP1 homolog, endonuclein
acts_upstream_of_or_within
ISO
(PMID:25335925)
RGD
PMID:25335925
NCBI chr 7:17,982,730...17,998,728
Ensembl chr 7:17,982,235...17,998,731
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Adipor1
adiponectin receptor 1
involved_in
ISO
(PMID:23776679)
RGD
PMID:23776679
NCBI chr13:45,859,461...45,879,248
Ensembl chr13:45,859,533...45,879,241
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Bcl3
BCL3, transcription coactivator
involved_in
ISO
(PMID:16306601)
RGD
PMID:16306601
NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607
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Cav1
caveolin 1
acts_upstream_of_or_within
ISO
MGI:2180364|MGI:97762 (PMID:12388746)
RGD
PMID:12388746
NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
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Dab1
DAB adaptor protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857750 (PMID:18848628)
Ensembl RGD
PMID:18848628
GO_REF:0000107
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
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Gbp7
guanylate binding protein 7
involved_in
ISO
(PMID:33408175)
RGD
PMID:33408175
NCBI chr 2:231,275,521...231,297,289
Ensembl chr 2:231,275,640...231,297,278
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Hgs
hepatocyte growth factor-regulated tyrosine kinase substrate
involved_in
ISO IEA
(PMID:12444102) GO_REF:0000107
RGD Ensembl
PMID:12444102
GO_REF:0000107
NCBI chr10:105,739,617...105,757,838
Ensembl chr10:105,739,296...105,757,835
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Hmga2
high mobility group AT-hook 2
IDA
RGD
PMID:11390395
RGD:1601592
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
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Leprot
leptin receptor overlapping transcript
involved_in
ISO IEA
(PMID:18042720) GO_REF:0000107
RGD Ensembl
PMID:18042720
GO_REF:0000107
NCBI chr 5:116,289,843...116,301,951
Ensembl chr 5:116,289,822...116,301,988
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Mir9-3
microRNA 9-3
involved_in
ISO
(PMID:25809226)
RGD
PMID:25809226
NCBI chr 1:133,440,049...133,440,138
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Neurod1
neuronal differentiation 1
acts_upstream_of_or_within
ISO
(PMID:18848628)
RGD
PMID:18848628
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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Nf2
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor
involved_in
ISO
(PMID:12444102)
RGD
PMID:12444102
NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
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Ptpn2
protein tyrosine phosphatase, non-receptor type 2
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627
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Ptprd
protein tyrosine phosphatase, receptor type, D
acts_upstream_of_or_within
ISO
MGI:2158795 (PMID:24843164)
RGD
PMID:24843164
NCBI chr 5:90,046,993...90,698,977 NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
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Sac3d1
SAC3 domain containing 1
acts_upstream_of_or_within
ISO
(PMID:18838617)
RGD
PMID:18838617
NCBI chr 1:203,414,184...203,416,563
Ensembl chr 1:203,414,187...203,416,604
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Sh2b3
SH2B adaptor protein 3
involved_in
ISO
(PMID:20404132)
RGD
PMID:20404132
NCBI chr12:34,731,934...34,753,617
Ensembl chr12:34,731,911...34,753,616
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Socs1
suppressor of cytokine signaling 1
involved_in acts_upstream_of_or_within
ISO
(PMID:25019494) MGI:2445448 (PMID:11371356)
RGD
PMID:11371356 PMID:25019494
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
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Socs2
suppressor of cytokine signaling 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97763 (PMID:16469767)
Ensembl RGD
PMID:16469767
GO_REF:0000107
NCBI chr 7:30,006,360...30,045,161
Ensembl chr 7:30,008,578...30,043,548
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Socs3
suppressor of cytokine signaling 3
involved_in
ISO
(PMID:25019494)
RGD
PMID:25019494
NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787
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Tbx1
T-box transcription factor 1
IMP
RGD
PMID:31982878
RGD:155882591
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
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Vhl
von Hippel-Lindau tumor suppressor
involved_in
ISO
(PMID:23338840)
RGD
PMID:23338840
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
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Cav1
caveolin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180364 (PMID:12388746)
Ensembl RGD
PMID:12388746
GO_REF:0000107
NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
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Ggnbp2
gametogenetin binding protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4072637 (PMID:26764350)
Ensembl RGD
PMID:26764350
GO_REF:0000107
NCBI chr10:69,711,527...69,743,134
Ensembl chr10:69,711,532...69,743,365
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Hnf4a
hepatocyte nuclear factor 4, alpha
IDA
STAT5b
RGD
PMID:16584384
RGD:1625011
NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
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Inpp5f
inositol polyphosphate-5-phosphatase F
involved_in
ISO
(PMID:25476455)
RGD
PMID:25476455
NCBI chr 1:183,190,480...183,270,276
Ensembl chr 1:183,190,480...183,270,276
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Irf1
interferon regulatory factor 1
IMP
RGD
PMID:20980260
RGD:5128774
NCBI chr10:37,917,155...37,924,166
Ensembl chr10:37,916,670...37,924,166
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Mir146a
microRNA 146a
involved_in
ISO
(PMID:28433754)
RGD
PMID:28433754
NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
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Nf2
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor
involved_in
ISO IEA
(PMID:12444102) GO_REF:0000107
RGD Ensembl
PMID:12444102
GO_REF:0000107
NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
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Parp14
poly (ADP-ribose) polymerase family, member 14
involved_in
ISO
(PMID:27796300)
RGD
PMID:27796300
NCBI chr11:64,902,848...64,934,916
Ensembl chr11:64,902,785...64,934,916
G
Pibf1
progesterone immunomodulatory binding factor 1
involved_in
ISO
(PMID:16393965)
RGD
PMID:16393965
NCBI chr15:75,850,389...76,019,711
Ensembl chr15:75,850,624...76,019,712
G
Ptpn2
protein tyrosine phosphatase, non-receptor type 2
NOT|involved_in
ISO IEA ISS
(PMID:12138178) GO_REF:0000107 GO_REF:0000024 (PMID:12359225), (PMID:17210636) (MGI:5493214|PMID:17210636)
RGD Ensembl UniProt
PMID:12138178 PMID:12359225 PMID:17210636
GO_REF:0000024 GO_REF:0000107 MGI:5493214
NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627
G
Socs1
suppressor of cytokine signaling 1
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:25019494) (PMID:9202127) GO_REF:0000107
RGD Ensembl
PMID:9202127 PMID:25019494
GO_REF:0000107
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
G
Socs3
suppressor of cytokine signaling 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:25019494)
Ensembl RGD
PMID:25019494
GO_REF:0000107
NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787
G
Suz12
SUZ12 polycomb repressive complex 2 subunit
IMP
RGD
PMID:23192652
RGD:9586745
NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
G
Ercc6
ERCC excision repair 6, chromatin remodeling factor
involved_in
ISO
(PMID:22483866)
RGD
PMID:22483866
NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
G
Ifna12l
interferon alpha 12 like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,476,362...103,477,427
Ensembl chr 5:103,476,657...103,477,211 Ensembl chr 5:103,476,657...103,477,211 Ensembl chr 5:103,476,657...103,477,211
G
Ifna4
interferon, alpha 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,069,174...103,070,120
Ensembl chr 5:103,069,483...103,070,052
G
Ifna5
interferon, alpha 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,187,852...103,188,430
G
Ifnb1
interferon beta 1
involved_in
ISO IBA
(PMID:18035482) GO_REF:0000033
RGD GO_Central
PMID:18035482
GO_REF:0000033
NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523
G
Ifne
interferon, epsilon
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,571,630...103,572,290
Ensembl chr 5:103,569,675...103,572,256
G
Ifng
interferon gamma
involved_in acts_upstream_of_or_within
IDA ISO
PMID:20624457 (PMID:16280321)
RGD
PMID:16280321 PMID:20624457
RGD:8554478
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
G
Ifnk
interferon kappa
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:49,732,073...49,734,281
Ensembl chr 5:49,732,073...49,734,281
G
Lif
LIF, interleukin 6 family cytokine
involved_in
ISO
(PMID:20624457)
RGD
PMID:20624457
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
G
LOC120103163
interferon alpha-12-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,494,442...103,495,077
Ensembl chr 5:103,494,448...103,495,002
G
LOC120103164
interferon alpha-12-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:103,509,610...103,510,260
Ensembl chr 5:103,509,616...103,510,170
G
Ret
ret proto-oncogene
acts_upstream_of_or_within
ISO
(PMID:23872421)
RGD
PMID:23872421
NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176
G
Adipor1
adiponectin receptor 1
IMP
RGD
PMID:18394428
RGD:2317907
NCBI chr13:45,859,461...45,879,248
Ensembl chr13:45,859,533...45,879,241
G
Agap2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
acts_upstream_of_or_within
ISO
MGI:4439325 (PMID:20075866)
RGD
PMID:20075866
NCBI chr 7:62,897,282...62,914,295
Ensembl chr 7:62,897,282...62,914,295
G
Akr1b1
aldo-keto reductase family 1 member B1
IMP
RGD
PMID:15746188
RGD:1626095
NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157
G
Calm1
calmodulin 1
involved_in
ISO IEA
(PMID:11972023), (PMID:35568036) GO_REF:0000107
RGD Ensembl
PMID:11972023 PMID:35568036
GO_REF:0000107
NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
G
Calm2
calmodulin 2
involved_in
ISO
(PMID:11972023), (PMID:35568036)
RGD
PMID:11972023 PMID:35568036
NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287 Ensembl chr15:7,091,567...7,104,287
G
Calm3
calmodulin 3
involved_in
ISO
(PMID:11972023), (PMID:35568036)
RGD
PMID:11972023 PMID:35568036
NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
G
Camk2a
calcium/calmodulin-dependent protein kinase II alpha
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:11972023), (PMID:35568036)
Ensembl UniProt RGD
PMID:11972023 PMID:35568036
GO_REF:0000024 GO_REF:0000107
NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
G
Cenpj
centromere protein J
acts_upstream_of_or_within
ISO
(PMID:12198240)
RGD
PMID:12198240
NCBI chr15:30,627,206...30,690,384
Ensembl chr15:30,627,224...30,686,791
G
Cntf
ciliary neurotrophic factor
IDA
RGD
PMID:15574731
RGD:1626128
NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
G
Crlf3
cytokine receptor-like factor 3
involved_in
ISO
(PMID:19427400)
RGD
PMID:19427400
NCBI chr10:65,024,228...65,060,746
Ensembl chr10:65,023,388...65,060,670
G
Cxcl6
C-X-C motif chemokine ligand 6
IDA
RGD
PMID:21114767
RGD:5135266
NCBI chr14:17,310,790...17,312,250
Ensembl chr14:17,310,426...17,313,093
G
Cyp1b1
cytochrome P450, family 1, subfamily b, polypeptide 1
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (MGI:5492227|PMID:23568032)
Ensembl UniProt RGD
PMID:23568032
GO_REF:0000024 GO_REF:0000107 MGI:5492227
NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
G
Ep300
E1A binding protein p300
involved_in
ISO
(PMID:16257975)
RGD
PMID:16257975
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Erbb4
erb-b2 receptor tyrosine kinase 4
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3689173|PMID:16837552) (PMID:15534001)
UniProt Ensembl RGD
PMID:15534001 PMID:16837552
GO_REF:0000024 GO_REF:0000107 MGI:3689173
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
G
F2r
coagulation factor II (thrombin) receptor
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870
G
Gh1
growth hormone 1
involved_in
ISO IBA
(PMID:8923468) GO_REF:0000033
RGD GO_Central
PMID:8923468
GO_REF:0000033
NCBI chr10:91,228,102...91,230,079
Ensembl chr10:91,228,103...91,230,078
G
Ghr
growth hormone receptor
involved_in
IDA IMP IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central RGD
PMID:11064147 PMID:10976913
GO_REF:0000033 GO_REF:0000118, RGD:1624963 , RGD:1624964
NCBI chr 2:52,541,452...52,804,960
Ensembl chr 2:52,542,594...52,804,735
G
Hes1
hes family bHLH transcription factor 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5284803|PMID:15156153) GO_REF:0000107
UniProt RGD Ensembl
PMID:15156153
GO_REF:0000024 GO_REF:0000107 MGI:5284803
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
involved_in
ISS ISO
GO_REF:0000024 (MGI:5284803|PMID:15156153)
UniProt RGD
PMID:15156153
GO_REF:0000024 MGI:5284803
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Ifne
interferon, epsilon
involved_in
ISO
(PMID:23964570)
RGD
PMID:23964570
NCBI chr 5:103,571,630...103,572,290
Ensembl chr 5:103,569,675...103,572,256
G
Ifnl1
interferon, lambda 1
involved_in
ISO
(PMID:12483210)
RGD
PMID:12483210
NCBI chr 1:83,798,651...83,800,297
Ensembl chr 1:83,798,703...83,800,235
G
Il10
interleukin 10
involved_in
ISO
(PMID:16982608)
RGD
PMID:16982608
NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
G
Il10ra
interleukin 10 receptor subunit alpha
involved_in
ISO
(PMID:16982608)
RGD
PMID:16982608
NCBI chr 8:45,563,009...45,578,041
Ensembl chr 8:45,563,137...45,578,061
G
Il10rb
interleukin 10 receptor subunit beta
involved_in
ISO
(PMID:16982608)
RGD
PMID:16982608
NCBI chr11:30,646,494...30,668,081
Ensembl chr11:30,652,096...30,668,074
G
Il4
interleukin 4
involved_in
ISO
(PMID:24280217)
RGD
PMID:24280217
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Il5
interleukin 5
IMP
RGD
PMID:10867506
RGD:2303751
NCBI chr10:37,874,342...37,877,213
Ensembl chr10:37,874,342...37,877,213
G
Il6
interleukin 6
involved_in
IDA IBA IEA ISO
GO_REF:0000033 GO_REF:0000118 (PMID:12419823), (PMID:12552091), (PMID:17324931) STAT3 phosphorylation
GO_Central TreeGrafter RGD
PMID:12419823 PMID:12552091 PMID:17324931 PMID:16413512 PMID:15659221
GO_REF:0000033 GO_REF:0000118, RGD:1580483 , RGD:1641883
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Il7r
interleukin 7 receptor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:58,452,393...58,477,757
Ensembl chr 2:58,454,217...58,477,757
G
Jak2
Janus kinase 2
involved_in
ISO
(PMID:12023369), (PMID:7638186)
RGD
PMID:7638186 PMID:12023369
NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
G
Kit
KIT proto-oncogene receptor tyrosine kinase
involved_in
ISO IBA
(PMID:21135090) GO_REF:0000033
RGD GO_Central
PMID:21135090
GO_REF:0000033
NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
G
Lep
leptin
involved_in
IMP IBA ISO ISS
GO_REF:0000033 (MGI:4889014|PMID:21234744), (MGI:5700303|PMID:16825198) GO_REF:0000024 (PMID:17344214)
GO_Central RGD UniProt
PMID:16825198 PMID:17344214 PMID:21234744 PMID:21250909
GO_REF:0000024 GO_REF:0000033 MGI:4889014 MGI:5700303 , RGD:5128518
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
G
Mir221
microRNA 221
involved_in
ISO
(PMID:25019494)
RGD
PMID:25019494
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Notch1
notch receptor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5284803|PMID:15156153)
UniProt RGD
PMID:15156153
GO_REF:0000024 MGI:5284803
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Prl
prolactin
involved_in acts_upstream_of_or_within
ISO IBA IEA
(PMID:12552091) MGI:102709 (PMID:12388746) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:12388746 PMID:12552091
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,859,999...37,870,062
Ensembl chr17:37,860,007...37,870,062
G
Prl2a1
prolactin family 2, subfamily A, member 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:36,931,000...36,937,092
Ensembl chr17:36,931,001...36,937,092
G
Prl2b1
prolactin family 2, subfamily B, member 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,591,159...37,598,186
Ensembl chr17:37,591,197...37,598,183
G
Prl2c1
prolactin family 2, subfamily C, member 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:36,881,099...36,889,419
Ensembl chr17:36,881,099...36,889,419
G
Prl3a1
prolactin family 3, subfamily A, member 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:37,693,595...37,711,904
Ensembl chr17:37,693,593...37,711,959
G
Prl3b1
prolactin family 3, subfamily B, member 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,743,681...37,749,340
Ensembl chr17:37,743,684...37,749,340
G
Prl3c1
prolactin family 3, subfamily C, member 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:37,784,674...37,790,468
Ensembl chr17:37,784,801...37,790,421
G
Prl3d1
prolactin family 3, subfamily D member 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,823,027...37,829,506
Ensembl chr17:37,823,027...37,829,052
G
Prl3d4
prolactin family 3, subfamily D, member 4
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,325,804...37,332,641
Ensembl chr17:37,325,806...37,332,667
G
Prl4a1
prolactin family 4, subfamily A, member 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr17:36,741,010...36,748,952
Ensembl chr17:36,741,041...36,748,987
G
Prl5a1
prolactin family 5, subfamily A, member 1
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr17:36,585,754...36,593,192
Ensembl chr17:36,516,579...36,593,192
G
Prl5a2
prolactin family 5, subfamily A, member 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:36,452,712...36,459,054
Ensembl chr17:36,452,718...36,459,054
G
Prl6a1
prolactin family 6, subfamily A, member 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,675,239...37,680,083
Ensembl chr17:37,675,243...37,680,113
G
Prl7a1l-ps1
prolactin family 7, subfamily a, member 1 like, pseudogene
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr17:37,172,333...37,184,610
Ensembl chr17:37,171,389...37,184,591 Ensembl chr17:37,171,389...37,184,591
G
Prl7a3
prolactin family 7, subfamily A, member 3
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,086,164...37,099,039
Ensembl chr17:37,086,136...37,099,037
G
Prl7a4
prolactin family 7, subfamily A, member 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:37,148,524...37,157,580
Ensembl chr17:37,148,520...37,157,579
G
Prl7b1
prolactin family 7, subfamily B, member 1
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,202,058...37,214,739
Ensembl chr17:37,206,547...37,214,723
G
Prl7c1
prolactin family 7, subfamily c, member 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:36,974,783...36,982,243
Ensembl chr17:36,974,838...36,982,212
G
Prl7d1
prolactin family 7, subfamily D, member 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:36,982,746...37,053,328
Ensembl chr17:37,046,834...37,053,691
G
Prl8a2
prolactin family 8, subfamily A, member 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:37,613,263...37,622,288
Ensembl chr17:37,613,267...37,622,288
G
Prl8a3
prolactin family 8, subfamily A, member 3
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,508,328...37,514,832
Ensembl chr17:37,508,328...37,514,825
G
Prl8a4
prolactin family 8, subfamily A, member 4
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,429,960...37,436,053
Ensembl chr17:37,429,960...37,436,053
G
Prl8a5
prolactin family 8, subfamily A, member 5
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,465,641...37,471,852
Ensembl chr17:37,465,657...37,471,849
G
Prl8a7
prolactin family 8, subfamily A, member 7
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr17:37,558,822...37,564,724
Ensembl chr17:37,558,883...37,564,718
G
Prl8a9
prolactin family 8, subfamily A, member 9
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:37,295,054...37,300,862
Ensembl chr17:37,295,054...37,300,859
G
Stra6
signaling receptor and transporter of retinol STRA6
acts_upstream_of_or_within
ISO
MGI:5490784 (PMID:23839944)
RGD
PMID:23839944
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
G
Tnf
tumor necrosis factor
involved_in
IDA
PMID:29702085
ARUK-UCL
PMID:29702085
RGD:13800534
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tyk2
tyrosine kinase 2
involved_in
ISO
(PMID:12023369), (PMID:7638186)
RGD
PMID:7638186 PMID:12023369
NCBI chr 8:19,641,881...19,667,157
Ensembl chr 8:19,641,884...19,667,044
G
Usp1
ubiquitin specific peptidase 1
involved_in
ISO
(PMID:37289831)
RGD
PMID:37289831
NCBI chr 5:113,587,564...113,598,934
Ensembl chr 5:113,587,564...113,598,932
G
Wdr48
WD repeat domain 48
involved_in
ISO
(PMID:37289831)
RGD
PMID:37289831
NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264
G
Arl2bp
ADP-ribosylation factor like GTPase 2 binding protein
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 (PMID:18234692)
UniProt GO_Central TreeGrafter RGD
PMID:18234692
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118
NCBI chr19:10,336,921...10,346,555
Ensembl chr19:10,336,921...10,346,564
G
Ccl5
C-C motif chemokine ligand 5
involved_in
ISO
(PMID:9417081)
RGD
PMID:9417081
NCBI chr10:68,322,826...68,327,380
Ensembl chr10:68,322,829...68,327,377
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Cd40
CD40 molecule
involved_in
ISO
(PMID:21410936)
RGD
PMID:21410936
NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534
G
Clcf1
cardiotrophin-like cytokine factor 1
involved_in
ISO IBA
(PMID:10966616), (PMID:11285233) GO_REF:0000033 (MGI:5009184|PMID:12090754)
RGD GO_Central
PMID:10966616 PMID:11285233 PMID:12090754
GO_REF:0000033 MGI:5009184
NCBI chr 1:201,507,763...201,517,607
Ensembl chr 1:201,507,859...201,517,605
G
Cntf
ciliary neurotrophic factor
acts_upstream_of_or_within involved_in
IDA ISO IBA IEA
retinal ganglion cells under increased intraocular pressure (PMID:15207851) GO_REF:0000033 GO_REF:0000107 (PMID:12643274), (PMID:21912637)
RGD GO_Central Ensembl
PMID:12643274 PMID:15207851 PMID:21912637 PMID:14725620
GO_REF:0000033 GO_REF:0000107, RGD:1626115
NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
G
Crlf1
cytokine receptor-like factor 1
involved_in
ISO IBA
(PMID:10966616) GO_REF:0000033
RGD GO_Central
PMID:10966616
GO_REF:0000033
NCBI chr16:18,924,722...18,936,049
Ensembl chr16:18,924,722...18,935,997
G
Csf1r
colony stimulating factor 1 receptor
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5294320|PMID:8007983) GO_REF:0000107
UniProt RGD Ensembl
PMID:8007983
GO_REF:0000024 GO_REF:0000107 MGI:5294320
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
G
Csf2
colony stimulating factor 2
involved_in
ISO
(PMID:9722506)
RGD
PMID:9722506
NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
G
Ctf1
cardiotrophin 1
involved_in
ISO IEA IBA
(PMID:21912637) GO_REF:0000118 GO_REF:0000033 GO_REF:0000107
RGD TreeGrafter GO_Central Ensembl
PMID:21912637
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr 1:182,328,035...182,336,346
Ensembl chr 1:182,328,090...182,333,335
G
Ctf2
cardiotrophin 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:182,334,061...182,342,406
Ensembl chr 1:182,333,238...182,342,623
G
ENSRNOG00000062450
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr11:8,366,468...8,367,230
G
ENSRNOG00000070430
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr X:4,828,216...4,828,818
G
Epo
erythropoietin
involved_in
ISO
(PMID:9722506)
RGD
PMID:9722506
NCBI chr12:19,204,258...19,207,948
Ensembl chr12:19,204,508...19,207,946
G
Erbb4
erb-b2 receptor tyrosine kinase 4
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:3689173|PMID:16837552) GO_REF:0000107 (PMID:16837552)
UniProt RGD Ensembl
PMID:16837552
GO_REF:0000024 GO_REF:0000107 MGI:3689173
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
G
Fgfr3
fibroblast growth factor receptor 3
involved_in
ISO
(PMID:17561467)
RGD
PMID:17561467
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
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Fyn
FYN proto-oncogene, Src family tyrosine kinase
involved_in
ISO IEA
(MGI:5528626|PMID:23438599) GO_REF:0000107
RGD Ensembl
PMID:23438599
GO_REF:0000107 MGI:5528626
NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911
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Gh1
growth hormone 1
involved_in
ISO IBA
(PMID:12552091), (PMID:8923468) GO_REF:0000033
RGD GO_Central
PMID:8923468 PMID:12552091
GO_REF:0000033
NCBI chr10:91,228,102...91,230,079
Ensembl chr10:91,228,103...91,230,078
G
Hcls1
hematopoietic cell specific Lyn substrate 1
involved_in
ISO
(MGI:3694161|PMID:10713104)
RGD
PMID:10713104
MGI:3694161
NCBI chr11:63,817,482...63,840,943
Ensembl chr11:63,817,476...63,841,014
G
Hdac1
histone deacetylase 1
IMP
RGD
PMID:21465537
RGD:9590234
NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
G
Hdac2
histone deacetylase 2
IMP
RGD
PMID:21465537
RGD:9590234
NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5284803|PMID:15156153) GO_REF:0000024
Ensembl RGD UniProt
PMID:15156153
GO_REF:0000024 GO_REF:0000107 MGI:5284803
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
involved_in
ISS ISO
GO_REF:0000024 (MGI:5284803|PMID:15156153)
UniProt RGD
PMID:15156153
GO_REF:0000024 MGI:5284803
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Hpx
hemopexin
acts_upstream_of_or_within
ISO
MGI:2447193 (PMID:18641331)
RGD
PMID:18641331
NCBI chr 1:159,932,819...159,940,327
Ensembl chr 1:159,932,755...159,940,328
G
Hsf1
heat shock transcription factor 1
IMP
RGD
PMID:22426029
RGD:10402789
NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
G
Ifng
interferon gamma
involved_in acts_upstream_of_or_within
IDA ISO
PMID:20624457 (PMID:16280321) (PMID:15604419)
RGD
PMID:15604419 PMID:16280321 PMID:20624457
RGD:8554478
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
G
Ifnl1
interferon, lambda 1
involved_in
ISO
(PMID:15166220)
RGD
PMID:15166220
NCBI chr 1:83,798,651...83,800,297
Ensembl chr 1:83,798,703...83,800,235
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Igf1
insulin-like growth factor 1
involved_in
ISO IEA
(PMID:9722506) GO_REF:0000107
RGD Ensembl
PMID:9722506
GO_REF:0000107
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Il12a
interleukin 12A
involved_in
ISO IEA
(PMID:12372421) GO_REF:0000107
RGD Ensembl
PMID:12372421
GO_REF:0000107
NCBI chr 2:152,965,769...152,973,035
Ensembl chr 2:152,965,769...152,972,734
G
Il12b
interleukin 12B
involved_in
ISO
(PMID:12023369)
RGD
PMID:12023369
NCBI chr10:28,888,832...28,903,802
Ensembl chr10:28,893,008...28,902,903
G
Il13
interleukin 13
IDA
RGD
PMID:21804025
RGD:5684373
NCBI chr10:37,790,130...37,792,687
Ensembl chr10:37,790,130...37,792,737
G
Il15
interleukin 15
involved_in
IDA IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central RGD
PMID:8942753
GO_REF:0000033 GO_REF:0000118, RGD:5024920
NCBI chr19:25,640,025...25,706,818
Ensembl chr19:25,640,251...25,706,820
G
Il18
interleukin 18
involved_in
IEA ISO
GO_REF:0000107 (PMID:10903731)
Ensembl RGD
PMID:10903731
GO_REF:0000107
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
G
Il2
interleukin 2
involved_in acts_upstream_of_or_within
ISO
(PMID:19088061) (PMID:10485657)
RGD
PMID:10485657 PMID:19088061
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
G
Il21
interleukin 21
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:17673207) GO_REF:0000107
RGD Ensembl
PMID:17673207
GO_REF:0000107
NCBI chr 2:120,117,105...120,127,012
Ensembl chr 2:120,119,444...120,126,996
G
Il23a
interleukin 23 subunit alpha
involved_in
ISO
(PMID:12023369), (PMID:19088061)
RGD
PMID:12023369 PMID:19088061
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
G
Il23r
interleukin 23 receptor
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 4:96,580,568...96,672,540
Ensembl chr 4:96,580,714...96,674,021
G
Il24
interleukin 24
IDA
RGD
PMID:19258414
RGD:5147427
NCBI chr13:42,353,089...42,358,487
Ensembl chr13:42,353,090...42,358,487
G
Il3
interleukin 3
involved_in
ISO
(PMID:9722506)
RGD
PMID:9722506
NCBI chr10:38,405,716...38,408,066
Ensembl chr10:38,405,716...38,408,066
G
Il31ra
interleukin 31 receptor A
involved_in
ISO
(PMID:11877449)
RGD
PMID:11877449
NCBI chr 2:44,118,748...44,189,943
Ensembl chr 2:44,122,624...44,183,767
G
Il4
interleukin 4
involved_in acts_upstream_of_or_within
ISO
UniProtKB:P08575 (PMID:12574355) (PMID:10485657)
RGD
PMID:10485657 PMID:12574355
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Il6
interleukin 6
involved_in
ISO
(PMID:12643274), (PMID:19390056), (PMID:28433754), (PMID:31886314)
RGD
PMID:12643274 PMID:19390056 PMID:28433754 PMID:31886314
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Il6r
interleukin 6 receptor
involved_in
ISO IBA IEA
(PMID:12643274) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:12643274
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:175,289,157...175,347,719
Ensembl chr 2:175,298,686...175,347,536
G
Il6st
interleukin 6 cytokine family signal transducer
involved_in
ISO IEA
(PMID:14764690) GO_REF:0000107
RGD Ensembl
PMID:14764690
GO_REF:0000107
NCBI chr 2:44,065,979...44,106,255
Ensembl chr 2:44,066,130...44,109,936
G
Isl1
ISL LIM homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15659653)
Ensembl RGD
PMID:15659653
GO_REF:0000107
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Jak2
Janus kinase 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:3828422|PMID:8923468), (MGI:5284803|PMID:15156153)
UniProt RGD
PMID:8923468 PMID:15156153
GO_REF:0000024 MGI:3828422 MGI:5284803
NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
G
Kit
KIT proto-oncogene receptor tyrosine kinase
involved_in
ISO
(PMID:21135090)
RGD
PMID:21135090
NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
G
Lck
LCK proto-oncogene, Src family tyrosine kinase
acts_upstream_of_or_within
ISO
(PMID:11254359)
RGD
PMID:11254359
NCBI chr 5:141,888,318...141,916,945
Ensembl chr 5:141,888,326...141,903,794
G
Lep
leptin
IMP
RGD
PMID:19726711
RGD:5128629
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
G
Lif
LIF, interleukin 6 family cytokine
involved_in
ISO
(PMID:20624457)
RGD
PMID:20624457
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
G
Lyn
LYN proto-oncogene, Src family tyrosine kinase
involved_in
ISS ISO
GO_REF:0000024 (MGI:3694161|PMID:10713104)
UniProt RGD
PMID:10713104
GO_REF:0000024 MGI:3694161
NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
G
Mir19a
microRNA 19a
involved_in
ISO
(PMID:18728182)
RGD
PMID:18728182
NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
G
Mir19b1
microRNA 19b-1
involved_in
ISO
(PMID:18728182)
RGD
PMID:18728182
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
G
Mir19b2
microRNA 19b-2
involved_in
ISO
(PMID:18728182)
RGD
PMID:18728182
NCBI chr X:132,422,072...132,422,167
Ensembl chr X:132,422,072...132,422,167
G
Mir221
microRNA 221
involved_in
ISO
(PMID:25019494)
RGD
PMID:25019494
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Osbp
oxysterol binding protein
IMP
RGD
PMID:18230613
RGD:2291921
NCBI chr 1:208,888,697...208,918,511
Ensembl chr 1:208,887,895...208,918,506
G
Osm
oncostatin M
involved_in
ISO
(PMID:21912637)
RGD
PMID:21912637
NCBI chr14:79,103,638...79,108,500
Ensembl chr14:79,104,344...79,108,313
G
Parp14
poly (ADP-ribose) polymerase family, member 14
involved_in
ISO
(PMID:27796300)
RGD
PMID:27796300
NCBI chr11:64,902,848...64,934,916
Ensembl chr11:64,902,785...64,934,916
G
Parp9
poly (ADP-ribose) polymerase family, member 9
involved_in
ISO
(PMID:27796300)
RGD
PMID:27796300
NCBI chr11:64,780,977...64,814,995
Ensembl chr11:64,780,981...64,815,455
G
Pecam1
platelet and endothelial cell adhesion molecule 1
acts_upstream_of_or_within
ISO
(PMID:11254359)
RGD
PMID:11254359
NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
G
Pibf1
progesterone immunomodulatory binding factor 1
involved_in
ISO
(PMID:16393965)
RGD
PMID:16393965
NCBI chr15:75,850,389...76,019,711
Ensembl chr15:75,850,624...76,019,712
G
Ptger4
prostaglandin E receptor 4
IMP
RGD
PMID:17067562
RGD:10043389
NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
G
Tnf
tumor necrosis factor
involved_in
IDA
PMID:29702085
ARUK-UCL
PMID:29702085
RGD:13800534
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tnfrsf18
TNF receptor superfamily member 18
involved_in
ISO
UniProtKB:Q9UNG2 (PMID:23892569)
RGD
PMID:23892569
NCBI chr 5:166,618,461...166,622,353
Ensembl chr 5:166,618,969...166,622,353
G
Tnfrsf1a
TNF receptor superfamily member 1A
involved_in
ISO IEA
(PMID:21410936) GO_REF:0000107
RGD Ensembl
PMID:21410936
GO_REF:0000107
NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
G
Tnfsf18
TNF superfamily member 18
involved_in
ISO
UniProtKB:Q9Y5U5 (PMID:23892569)
RGD
PMID:23892569
NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169
G
Tslp
thymic stromal lymphopoietin
involved_in
ISO IBA
(PMID:11480573) GO_REF:0000033
RGD GO_Central
PMID:11480573
GO_REF:0000033
NCBI chr18:24,447,409...24,454,244
Ensembl chr18:24,449,844...24,453,548
G
Dot1l
DOT1 like histone lysine methyltransferase
involved_in
ISO
(PMID:22002246)
RGD
PMID:22002246
NCBI chr 7:8,918,764...8,959,474
Ensembl chr 7:8,917,786...8,956,475
G
Egf
epidermal growth factor
involved_in
ISS ISO
GO_REF:0000024 (MGI:5284803|PMID:15156153)
UniProt RGD
PMID:15156153
GO_REF:0000024 MGI:5284803
NCBI chr 2:218,219,408...218,302,359
Ensembl chr 2:218,219,415...218,302,064
G
Elp2
elongator acetyltransferase complex subunit 2
acts_upstream_of_or_within
ISO
(PMID:10954736)
RGD
PMID:10954736
NCBI chr18:15,885,940...15,921,564
Ensembl chr18:15,885,934...15,921,599
G
Ephb2
Eph receptor B2
IDA
RGD
PMID:33722292
RGD:127285641
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Hes1
hes family bHLH transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5284803|PMID:15156153)
UniProt RGD
PMID:15156153
GO_REF:0000024 MGI:5284803
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Ifnar1
interferon alpha and beta receptor subunit 1
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr11:30,725,774...30,752,227
Ensembl chr11:30,725,790...30,749,979
G
Il9
interleukin 9
acts_upstream_of_or_within
ISO
(PMID:18551134)
RGD
PMID:18551134
NCBI chr17:8,111,772...8,114,895
Ensembl chr17:8,111,772...8,114,895
G
Mst1
macrophage stimulating 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2445230 (PMID:25049204)
GO_Central RGD
PMID:25049204
GO_REF:0000033
NCBI chr 8:108,767,886...108,773,425
Ensembl chr 8:108,768,839...108,773,416
G
Pigu
phosphatidylinositol glycan anchor biosynthesis, class U
involved_in
IEA ISO
GO_REF:0000107 (PMID:15034568)
Ensembl RGD
PMID:15034568
GO_REF:0000107
NCBI chr 3:143,784,831...143,881,268
Ensembl chr 3:143,784,832...143,880,807
G
Prl
prolactin
acts_upstream_of_or_within
ISO
(PMID:12147240)
RGD
PMID:12147240
NCBI chr17:37,859,999...37,870,062
Ensembl chr17:37,860,007...37,870,062
G
Ptprc
protein tyrosine phosphatase, receptor type, C
involved_in
ISO
UniProtKB:P05112 (PMID:12574355)
RGD
PMID:12574355
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
G
Rac1
Rac family small GTPase 1
involved_in
ISO
(MGI:6217799|PMID:27050391)
RGD
PMID:27050391
MGI:6217799
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
G
Socs1
suppressor of cytokine signaling 1
acts_upstream_of_or_within
ISO
MGI:2656917 (PMID:21606371)
RGD
PMID:21606371
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
G
Cnot7
CCR4-NOT transcription complex, subunit 7
involved_in
ISO
(PMID:23386060)
RGD
PMID:23386060
NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
G
Il12b
interleukin 12B
involved_in
ISO
(PMID:12023369)
RGD
PMID:12023369
NCBI chr10:28,888,832...28,903,802
Ensembl chr10:28,893,008...28,902,903
G
Il22
interleukin 22
acts_upstream_of_or_within
ISO
(PMID:12700595)
RGD
PMID:12700595
NCBI chr 7:53,801,206...53,805,673
Ensembl chr 7:53,801,206...53,806,186
G
Il22ra2
interleukin 22 receptor subunit alpha 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12700595)
Ensembl RGD
PMID:12700595
GO_REF:0000107
NCBI chr 1:14,353,736...14,377,844
Ensembl chr 1:14,364,489...14,377,844
G
Il23a
interleukin 23 subunit alpha
involved_in
ISO
(PMID:12023369)
RGD
PMID:12023369
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
G
Socs1
suppressor of cytokine signaling 1
acts_upstream_of_or_within
ISO
MGI:2656917 (PMID:21606371)
RGD
PMID:21606371
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
G
Il24
interleukin 24
IDA
RGD
PMID:19258414
RGD:5147427
NCBI chr13:42,353,089...42,358,487
Ensembl chr13:42,353,090...42,358,487
G
Jak2
Janus kinase 2
IMP
RGD
PMID:15659221 PMID:17920330
RGD:1641883 , RGD:5686906
NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all