Strap (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 4 | 172,377,325 - 172,391,573 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 170,646,042 - 170,660,291 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 170,646,001 - 170,660,828 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 176,941,205 - 176,955,453 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 172,725,536 - 172,739,784 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 171,345,915 - 171,360,163 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 171,730,629 - 171,744,877 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 171,730,635 - 171,745,377 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 235,987,501 - 236,001,749 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 174,863,502 - 174,877,750 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 175,108,625 - 175,122,869 (+) | NCBI | | | | | Celera | 4 | 159,222,263 - 159,236,511 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q44 | NCBI | | | | |
|
STRAP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 12 | 15,882,387 - 15,903,478 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 15,882,387 - 15,903,478 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 16,035,321 - 16,056,412 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 15,926,555 - 15,947,679 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 15,926,612 - 15,947,675 | NCBI | | | | | Celera | 12 | 21,180,201 - 21,201,326 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | p12.3 | NCBI | | | | | HuRef | 12 | 15,804,489 - 15,825,615 (+) | NCBI | | HuRef | | | CHM1_1 | 12 | 16,001,228 - 16,022,353 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 15,759,643 - 15,780,736 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Strap (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 6 | 137,712,080 - 137,728,928 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 137,712,076 - 137,728,930 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 137,735,082 - 137,751,930 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 137,735,078 - 137,751,932 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 137,683,603 - 137,700,451 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 137,699,320 - 137,715,292 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 140,801,022 - 140,817,874 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | G1 | NCBI | | | | | cM Map | 6 | 67.27 | NCBI | | | | |
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Strap (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955413 | 12,533,423 - 12,559,288 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955413 | 12,533,422 - 12,558,138 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
STRAP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 10 | 21,329,335 - 21,350,503 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 21,326,100 - 21,347,407 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 15,883,512 - 15,904,778 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 16,279,134 - 16,302,212 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 16,279,956 - 16,300,746 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
STRAP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 27 | 30,800,853 - 30,817,578 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 30,675,247 - 30,817,388 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 15,630,425 - 15,647,595 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 31,120,261 - 31,137,477 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 31,120,690 - 31,137,463 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 31,010,663 - 31,027,845 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 30,965,417 - 30,982,600 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 15,352,698 - 15,369,898 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Strap (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404945 | 91,950,994 - 91,972,959 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936587 | 1,678,439 - 1,701,216 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936587 | 1,679,570 - 1,700,610 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
STRAP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 5 | 56,717,207 - 56,736,862 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 56,717,196 - 56,736,889 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 60,006,576 - 60,026,251 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
STRAP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 15,790,449 - 15,812,964 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 15,790,798 - 15,813,585 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666069 | 19,487,187 - 19,510,770 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Strap (Heterocephalus glaber - naked mole-rat) |
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