Advanced Search (OLGA)

Gene: Suco (SUN domain containing ossification factor) Rattus norvegicus

Analyze

Symbol:

Suco

Name:

SUN domain containing ossification factor

RGD ID:

735185

Description:

Predicted to be involved in positive regulation of collagen biosynthetic process; positive regulation of osteoblast differentiation; and regulation of bone remodeling. Predicted to be located in rough endoplasmic reticulum. Predicted to be active in cytoplasm and membrane. Orthologous to human SUCO (SUN domain containing ossification factor); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Dd25; hypothetical protein Dd25; membrane protein CH1; protein C1orf9 homolog; protein osteopotentia homolog; SUN domain-containing ossification factor; SUN-like protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SUCO (SUN domain containing ossification factor)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Suco (SUN domain containing ossification factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Suco (SUN domain containing ossification factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SUCO (SUN domain containing ossification factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SUCO (SUN domain containing ossification factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Suco (SUN domain containing ossification factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SUCO (SUN domain containing ossification factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SUCO (SUN domain containing ossification factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Suco (SUN domain containing ossification factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Suco (SUN domain containing ossification factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SUCO (SUN domain containing ossification factor)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Suco (SUN domain containing ossification factor)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	suco (SUN domain containing ossification factor)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG31678	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	SLP1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	SLP1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	suco-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	suco	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	76,726,095 - 76,791,174 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	76,726,859 - 76,791,174 (-)	Ensembl				GRCr8
mRatBN7.2	13	74,192,808 - 74,257,896 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	74,193,573 - 74,257,896 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	76,763,182 - 76,827,500 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	78,070,281 - 78,134,592 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	75,330,141 - 75,394,457 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	79,736,485 - 79,801,133 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	79,736,482 - 79,801,561 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	84,629,768 - 84,694,850 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	77,512,517 - 77,575,792 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	73,947,829 - 74,010,497 (-)	NCBI		Celera
RGSC_v3.1	13	77,526,704 - 77,589,980 (-)	NCBI
Cytogenetic Map	13	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

osteogenesis imperfecta type 5 (ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

bisphenol A (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbamazepine (ISO)

chlordecone (ISO)

clobetasol (ISO)

cobalt dichloride (ISO)

copper atom (EXP)

copper(0) (EXP)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dimethyl sulfoxide (ISO)

epoxiconazole (ISO)

fluoranthene (ISO)

flutamide (EXP)

FR900359 (ISO)

GSK-J4 (ISO)

leflunomide (ISO)

miconazole (ISO)

okadaic acid (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

rotenone (EXP)

serpentine asbestos (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

testosterone (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

thiram (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

ossification (IEA)

positive regulation of collagen biosynthetic process (IEA,ISO,ISS)

positive regulation of osteoblast differentiation (IEA,ISO,ISS)

regulation of bone remodeling (IBA,IEA,ISO,ISS)

Cellular Component

cytoplasm (IBA)

endomembrane system (IEA)

membrane (IBA,IEA,ISO,ISS)

rough endoplasmic reticulum (IEA,ISO,ISS)

rough endoplasmic reticulum membrane (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:20440000

Genomics

Comparative Map Data

Suco
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	76,726,095 - 76,791,174 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	76,726,859 - 76,791,174 (-)	Ensembl				GRCr8
mRatBN7.2	13	74,192,808 - 74,257,896 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	74,193,573 - 74,257,896 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	76,763,182 - 76,827,500 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	78,070,281 - 78,134,592 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	75,330,141 - 75,394,457 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	79,736,485 - 79,801,133 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	79,736,482 - 79,801,561 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	84,629,768 - 84,694,850 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	77,512,517 - 77,575,792 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	73,947,829 - 74,010,497 (-)	NCBI		Celera
RGSC_v3.1	13	77,526,704 - 77,589,980 (-)	NCBI
Cytogenetic Map	13	q22	NCBI

SUCO
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	172,532,349 - 172,611,833 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	172,532,349 - 172,611,833 (+)	Ensembl			hg38	GRCh38
GRCh37	1	172,501,489 - 172,580,973 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	170,768,112 - 170,847,594 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	169,233,145 - 169,312,628	NCBI
Celera	1	145,611,714 - 145,690,427 (+)	NCBI		Celera
Cytogenetic Map	1	q24.3	NCBI
HuRef	1	143,726,516 - 143,805,573 (+)	NCBI		HuRef
CHM1_1	1	173,924,412 - 174,003,286 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	171,889,056 - 171,968,934 (+)	NCBI		T2T-CHM13v2.0

Suco
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	161,643,681 - 161,704,506 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	161,643,683 - 161,704,251 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	161,816,112 - 161,876,837 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	161,816,114 - 161,876,682 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	163,746,243 - 163,806,792 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	163,652,790 - 163,713,822 (-)	NCBI		MGSCv36	mm8
Celera	1	164,271,070 - 164,331,590 (-)	NCBI		Celera
Cytogenetic Map	1	H2.1	NCBI
cM Map	1	69.95	NCBI

Suco
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	12,985,856 - 13,065,855 (+)	Ensembl
ChiLan1.0	NW_004955406	12,985,339 - 13,064,863 (+)	NCBI	ChiLan1.0	ChiLan1.0

SUCO
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	77,131,516 - 77,213,205 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	76,811,510 - 76,893,460 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	148,030,922 - 148,112,755 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	151,740,627 - 151,821,285 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	151,739,934 - 151,821,285 (+)	Ensembl			panPan2	panpan1.1

SUCO
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	26,375,414 - 26,410,001 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	26,376,990 - 26,464,125 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	25,906,260 - 25,995,131 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	26,126,201 - 26,215,298 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	26,126,203 - 26,215,320 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	26,037,094 - 26,126,044 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	26,107,058 - 26,196,508 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	26,257,807 - 26,346,923 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Suco
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	96,976,873 - 97,045,569 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936481	14,823,253 - 14,892,318 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936481	14,823,622 - 14,892,312 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SUCO
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	114,916,855 - 115,007,972 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	114,916,957 - 115,007,979 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	126,512,893 - 126,604,568 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SUCO
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	56,541,074 - 56,623,086 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	56,541,038 - 56,623,201 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666055	58,147,005 - 58,229,222 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Suco
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624771	9,096,453 - 9,168,731 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624771	9,094,893 - 9,168,989 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Suco
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	10	41,118,182 - 41,182,540 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Suco
403 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	36
Count of miRNA genes:	33
Interacting mature miRNAs:	36
Transcripts:	ENSRNOT00000036483
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298066	Bp159	Blood pressure QTL 159		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	48639634	93639634	Rat
10755495	Bp387	Blood pressure QTL 387	3.78		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37216241	90057603	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	38975045	103588154	Rat
8655951	Rf63	Renal function QTL 63	12.2		blood urea nitrogen amount (VT:0005265)	plasma urea nitrogen level (CMO:0000586)	13	71610804	109350286	Rat
70220	Bp55	Blood pressure QTL 55	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
8655945	Rf61	Renal function QTL 61	3.6		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	13	71610804	89333251	Rat
71119	Thym2	Thymus enlargement QTL 2	3.8		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	13	48749814	87285480	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	39968211	83286298	Rat
1331783	Bp221	Blood pressure QTL 221	3.72886		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	71610804	89333251	Rat
8655959	Pur32	Proteinuria QTL 32	8.4		urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	72984506	99745408	Rat
2293687	Bss26	Bone structure and strength QTL 26	4.6	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	13	67635937	109350286	Rat
1300166	Kidm6	Kidney mass QTL 6	3.93		kidney mass (VT:0002707)	single kidney wet weight to body weight ratio (CMO:0000622)	13	71610804	89333251	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	7421791	87286911	Rat
61340	Bp25	Blood pressure QTL 25	4.2	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37087983	82087983	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
1549897	Stresp12	Stress response QTL 12	3.35		stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	13	40983585	85983585	Rat
724564	Uae11	Urinary albumin excretion QTL 11	5.7		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	13	47354258	94285672	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	21120177	109350286	Rat
738027	Lnnr6	Liver neoplastic nodule remodeling QTL 6	3.3		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	65613454	109350286	Rat
7387280	Uae43	Urinary albumin excretion QTL 43	5.69	0.4174	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	68983334	109350286	Rat
738026	Lnnr5	Liver neoplastic nodule remodeling QTL 5	3.29		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	62424592	88113509	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	33794096	78794096	Rat
2293702	Bss34	Bone structure and strength QTL 34	4.61	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	13	67635937	109350286	Rat
61349	Bp31	Blood pressure QTL 31	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
1576318	Schws5	Schwannoma susceptibility QTL 5		0.0351	nervous system integrity trait (VT:0010566)	post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)	13	64497900	109350286	Rat
2303563	Bw89	Body weight QTL 89	6		body mass (VT:0001259)	body weight (CMO:0000012)	13	34834947	79834947	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	11081740	103588154	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
12879477	Bp401	Blood pressure QTL 401			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	39814726	84814726	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	39968211	84968211	Rat
12879475	Bp400	Blood pressure QTL 400			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	64375743	109350286	Rat
11530006	Niddm72	Non-insulin dependent diabetes mellitus QTL 72		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	38286298	83286298	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	103588154	Rat
2293341	Glom15	Glomerulus QTL 15	9.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	13	67635937	109350286	Rat

Markers in Region

BF398732

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	74,193,733 - 74,193,864 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	79,737,410 - 79,737,540	NCBI	Rnor6.0
Rnor_5.0	13	84,630,693 - 84,630,823	UniSTS	Rnor5.0
RGSC_v3.4	13	77,512,088 - 77,512,218	UniSTS	RGSC3.4
Celera	13	73,947,400 - 73,947,530	UniSTS
RH 3.4 Map	13	417.6	UniSTS
Cytogenetic Map	13	q22	UniSTS

BE119592

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	74,291,663 - 74,291,824 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	79,835,326 - 79,835,486	NCBI	Rnor6.0
Rnor_5.0	13	84,728,607 - 84,728,767	UniSTS	Rnor5.0
RGSC_v3.4	13	77,610,837 - 77,610,997	UniSTS	RGSC3.4
Celera	13	74,044,596 - 74,044,756	UniSTS
RH 3.4 Map	13	453.8	UniSTS
Cytogenetic Map	13	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_199403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250164	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769657	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001840781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001840782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010056923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010056924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010056925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC144674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ421447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HH770428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000036483 ⟹ ENSRNOP00000033216

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	13	79,737,839 - 79,801,116 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000075936 ⟹ ENSRNOP00000068027

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	76,726,859 - 76,791,174 (-)	Ensembl
mRatBN7.2 Ensembl	13	74,193,573 - 74,257,896 (-)	Ensembl
Rnor_6.0 Ensembl	13	79,736,482 - 79,801,561 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000075998 ⟹ ENSRNOP00000067901

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	76,726,859 - 76,791,174 (-)	Ensembl
mRatBN7.2 Ensembl	13	74,193,573 - 74,257,896 (-)	Ensembl
Rnor_6.0 Ensembl	13	79,737,985 - 79,801,368 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076706 ⟹ ENSRNOP00000067896

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	13	79,737,847 - 79,744,939 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000084058 ⟹ ENSRNOP00000071346

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	76,726,859 - 76,791,174 (-)	Ensembl
mRatBN7.2 Ensembl	13	74,193,573 - 74,257,896 (-)	Ensembl
Rnor_6.0 Ensembl	13	79,737,806 - 79,801,369 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087323 ⟹ ENSRNOP00000075385

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	13	79,738,004 - 79,801,112 (-)	Ensembl

RefSeq Acc Id:

NM_199403 ⟹ NP_955435

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,726,859 - 76,791,174 (-)	NCBI
mRatBN7.2	13	74,193,573 - 74,257,896 (-)	NCBI
Rnor_6.0	13	79,737,839 - 79,801,116 (-)	NCBI
Rnor_5.0	13	84,629,768 - 84,694,850 (-)	NCBI
RGSC_v3.4	13	77,512,517 - 77,575,792 (-)	RGD
Celera	13	73,947,829 - 74,010,497 (-)	RGD

Sequence:

show sequence

GAAGATGAAGAAGTACCGGCGGGCCTTGGCCCTGGTCTCCTGCCTCTCTCTCTGCTCTCTAGTC
TGGCTTCCAAGTTGGCATGTATGCTGTAAAGAGAGTTCTTCAGCTTCAACATCATACTATTCTC
AAGATGATAATTGTGCAGTAGGAAGTGAAGACATACAGTTCCAGAAAAAGAATGAAAGAGAAGA
ACCTAGTAATGCTAAAGTATCAGAAAAATCAAATTCATATTTAACTATATCTCCAGAAGAAAAT
AAATTAAAAGATGACTACACTGTGGATGAATGCAAAATATGGAAACAGTCGAAGTTAAGTCTAC
CTGTGGTTGAAGCACTCCCTACAGTTGATTCGCATGAAGAGTCTTCCAGTGTAGTTGTAGGCAG
TGAAAACATCGAAAATAGTTCCAGTTCATCTACCTCAGAAACCAGTCCAATCTCAAAGCTTGAT
GAAATAGAAAACTCTGGTACTTTATCTGTAGCCAAGCCAGGTGACACAGAGCAGCCTGAAGCTG
ACTGTGATGCTGGGGAGGCTGCGGACGCAGATGCTTCCGTGGAGCAGCCTGCTTTCGTCAGTGC
ACCGGAGAGCCTTGTTGGCCAACATATAGAGAACGTGTCGTCTTCACATGGCAAAGAAAAAGTA
ACAAAATCAGAGTTTGAATCAAAAGTTTCAGTGAGTGAACAAGATGGCGGTGATCCAAAGTCTG
CATTGAATGCTTCAGATACTTTAAAAAATGAGAGCTCTGATTATACAAAACCACGAGAAACTGA
CCCTACATCTGTTACAAGTCCCAAAGACCCAGAAGATATACCCACATTTGATGAGTGGAAGAAG
AAAGTTATGGAAGTAGAGAAAGAAAAAAGTCAGTCGTTGCACCCATCTTCTAATGGAGGTCCAC
ATGCCACCAAAAAGGTCCAGAAAAATAGAAATAATTATGCCTCTGTAGAATGCGGTGCCAAAAT
TTTGGCAGCTAATCCGGAAGCCAAGAGCACATCTGCTATTCTTATAGAAAATATGGATCTTTAT
ATGCTGAATCCTTGCAGCACTAAAATATGGTTTGTTATTGAGCTTTGTGAGCCAATTCAAGTGA
AACAGTTTGATATTGCAAATTATGAATTATTTTCTTCTACTCCCAAAGACTTTCTGGTTTCTAT
CAGTGACAGATATCCCACAAATAAATGGATTAAGCTGGGTACTTTCCATGGTAGAGATGAGCGG
ACTGTCCAAAGTTTCCCCCTGGATGAACAGATGTATGCAAAATATGTGAAGATGTTCATCAAGT
ACATAAAGGTGGAGCTGTTGTCTCATTTTGGATCAGAGCACTTCTGTCCTTTAAGCCTAATAAG
GGTTTTCGGTACTAGTATGGTGGAAGAATATGAGGAAATTGCTGACTCCCAGTATCAATCAGAG
CGTCAGGAACTATTTGATGAGGACTATGACTATCCCCTGGATTATAATACTGTGGAGGATAAAT
CTTCAAAGAATCTTCTTGGTTCTGCTACAAATGCCATTCTAAATATGGTGAATATTGCTGCTAA
TATTCTGGGAGCAAAAACTGAAGACTTGACAGAAGGAGATAAAAGTATATCTGAGAATGCCACT
GCCACAACTGAACCTAAAATGCCTGAATCAACTGGTGTTTCAACTCCTGTTCCATCGCCTGAAT
ATATAATCAAGGAAGTCCATACACATGATACAGAACCACCAACCTCAGATCCTCCAAAGGAGAG
TCCGATTGTACAGCTGGTTCAGGAGGAAGAGGAGGAAGCAAGCCCATCTACAGTGACCCTTCTG
GGCAGCGGCGAACAGGAGGATGAGTCCTCATCCTGGTTTGAGTCTGAGACACAAATACTTTGTA
GTGAACTGACCTCAATTTGTTGTATTTCTAGTTTTTCGGAGTACTTATATAAATGGTGCTCAGT
TAGAATCGCTCTTTATCGACAACACAGCAGAACTGTGAGTAAAGGAAAAGATGTGTCACCTCAG
CCATCGTTACTCCCTCCTGTAGACTCAGTAGAAGTTTCAGTACTGCAGCCTCCCAGTGGAAATG
TGGATAAGGAGGACATGGAAAGAGAATTGGAGACTGTGGCTCTGGATGATTTAAGTAGTGTGCA
CCAGGCTCATGTGAGGAATCACACAGTGGATACAGTTGAACTTGAACCAAGCTACCCTCAAACT
CTCTCTCAGTCCCTTCCCTTAGACGTTACTCCAGAAATGGATTCACTGTCTACAGTAGAAGGAT
CTGAGTCTGTTAAATCTGAGGGAGGACATAAACCATCGCAAGTCATGCCCCAAGAGAGTTCTGT
CGAGTTTGATGACGAAACAGAAAAAAAGCCTGAGAGCTTTAGTTCTGTTGCGAAGCTCTCTGTT
ATTTATGAAACAAGTAAAGTTAACGAGGTAATGGACGGTCCTGTGAAAGAAGACATAGTCTCCA
CACACGTGGTCACCAAGTTCCCTGAAACCAAGTTCCCTGAAACAGTAGCACCACCCCCTATAAA
CACAGCCGCTGTGCCTGAGAGTGAAGGCATGGAAACCAAACCTAGTTTAGCTGATACACTAAAG
CACGTAGTGACGCCCGTTACAGATCCTTCATTGCCTGAAGTGAAAGAGGATGAGCAGTCTCCAG
ACGATGCCCTTTTAAGAGGGTTACAGAGGACAGCTACAGATTTCTATGCTGAACTACAAAATTC
TACAGATCTGGGATATGGTAATGGAAACCTTGTACATGGATCAAATCAGAAGGAGTCAGTATTT
ATGAGACTTAATAATCGTATTAAAGCCTTAGAAGTTAACATGTCTCTCAGTGGTCGTTATCTGG
AGGAGCTTAGTCAAAGGTACCGAAAACAAATGGAAGAAATGCAAAAGGCTTTCAATAAAACAAT
AGTTAAGCTTCAGAATACTTCACGGATAGCAGAAGAGCAGGATCAGCGGCAAACTGAAGCCATC
CACTTGCTGCAGGCACAACTGACCAACATGACACAGATTGTTTCAAACTTGTCAGCAACTGTAG
CAGAATTAAAACGGGAGGTTTCAGATCGTCAGAGTTACCTTGTCATGTCTTTGGTTCTATGTGT
GGTCTTGGGACTGATGCTCTGTATGCAACGTTGTCGAAATACTTCTCAATTTGATGGAGATTAC
ACTTCAAAACTTCCTAAAAGTAATCAGTACCCAAGCCCTAAAAGGTGTTTTTCCTCCTATGATG
ACATGAATTTGAAAAGAAGAACCTCATTTCCCCTCATCAGATCCAAGTCTTTGCAGTTTACTGG
CAAAGAAGACCCGAATGATTTGTACATCGTAGAACCCCTCAAGTTCTCTCCAGAGAAAAAGAAG
AAACGTTGCAAGTACAAAACTGAAAAAATTGAGACAATAAAGCCTGCAGATCCATTGCACCCTA
TAGCCAATGGAGATATAAAAGGAAGAAAGCCCTTTACGAACCAGAGAGATTTTTCTAGTATGGG
AGAAGTTTATCACTCTTCTTACAAGGGCCCTCCGTCTGAGGGAAGCTCAGAAACTTCATCACAG
TCAGAAGAGTCCTATTTTTGTGGCATTTCAGCTTGTACAAGTCTGTGCAATGGACAGACCCAAA
AGACAAAACTGAGAAGAGGCTTAAAACGAAGGCGATCTAAAGTCCAAGACCAAGGAAAGTTAAT
AAAAGCTCTTATACAGACTAAGTCGGGGTCATTGCCGAGCCTGCATGACATAATCAAAGGAAAC
AAGGAGATCACCGTGGGAGCATTTGGGGTTACAGCAGTCTCGGGACATATCTAAAAGGAGCTGA
ACATTTATACTGAAAACTTTTTTGTTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGGTTCAGG
GGGAGGGATAAAATATTGGGGAAAGTATTCAGAAATTATGGGTTTTTTTATTTTGCCTTTTAAA
AAAGTAGACAGGATTGTGTCAATCTTGGCT

hide sequence

RefSeq Acc Id:

XM_006250164 ⟹ XP_006250226

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,726,095 - 76,790,796 (-)	NCBI
mRatBN7.2	13	74,192,808 - 74,257,519 (-)	NCBI
Rnor_6.0	13	79,736,485 - 79,801,133 (-)	NCBI
Rnor_5.0	13	84,629,768 - 84,694,850 (-)	NCBI

Sequence:

show sequence

AGGGGGAAGAAGGAGGAGAAGATGAAGAAGTACCGGCGGGCCTTGGCCCTGGTCTCCTGCCTCT
CTCTCTGCTCTCTAGTCTGGCTTCCAAGTTGGCATGTATGCTGTAAAGAGAGTTCTTCAGCTTC
AACATCATACTATTCTCAAGATGATAATTGTGCAGTAGGAAGTGAAGACATACAGTTCCAGAAA
AAGAATGAAAGAGAAGAACCTAGTAATGCTAAAGTATCAGAAAAATCAAATTCATATTTAACTA
TATCTCCAGAAGAAAATAAATTAAAAGATGACTACACTGTGGATGAACAAAATATGGAAACAGC
GAAGTTAAGTCTACCTGTGGTTGAAGCACTCCCTACAGTTGATTCGCATGAAGAGTCTTCCAGT
GTAGTTGTAGGCAGTGAAAACATCGAAAATAGTTCCAGTTCATCTACCTCAGAAACGACTCCAA
TCTCAAAGCTTGATGAAATAGAAAACTCTGGTACTTTATCTGTAGCCAAGCCAGGTGACACAGA
GCAGCCTGAAGCTGACTGTGATGCTGGGGAGGCTGCGGACGCAGATGCTTCCGTGGAGCAGCCT
GCTTTCGTCAGTGCACCGGAGAGCCTTGTTGGCCAACATATAGAGAACGTGTCGTCTTCACATG
GCAAAGAAAAAGTAACAAAATCAGAGTTTGAATCAAAAGTTTCAGTGAGTGAACAAGATGGCGG
TGATCCAAAGTCTGCATTGAATGCTTCAGATACTTTAAAAAATGAGAGCTCTGATTATACAAAA
CCACGAGAAACTGACCCTACATCTGTTACAAGTCCCAAAGACCCAGAAGATATACCCACATTTG
ATGAGTGGAAGAAGAAAGTTATGGAAGTAGAGAAAGAAAAAAGTCAGTCGTTGCACCCATCTTC
TAATGGAGGTCCACATGCCACCAAAAAGGTCCAGAAAAATAGAAATAATTATGCCTCTGTAGAA
TGCGGTGCCAAAATTTTGGCAGCTAATCCGGAAGCCAAGAGCACATCTGCTATTCTTATAGAAA
ATATGGATCTTTATATGCTGAATCCTTGCAGCACTAAAATATGGTTTGTTATTGAGCTTTGTGA
GCCAATTCAAGTGAAACAGTTTGATATTGCAAATTATGAATTATTTTCTTCTACTCCCAAAGAC
TTTCTGGTTTCTATCAGTGACAGATATCCCACAAATAAATGGATTAAGCTGGGTACTTTCCATG
GTAGAGATGAGCGGACTGTCCAAAGTTTCCCCCTGGATGAACAGATGTATGCAAAATATGTGAA
GATGTTCATCAAGTACATAAAGGTGGAGCTGTTGTCTCATTTTGGATCAGAGCACTTCTGTCCT
TTAAGCCTAATAAGGGTTTTCGGTACTAGTATGGTGGAAGAATATGAGGAAATTGCTGACTCCC
AGTATCAATCAGAGCGTCAGGAACTATTTGATGAGGACTATGACTATCCCCTGGATTATAATAC
TGTGGAGGATAAATCTTCAAAGAATCTTCTTGGTTCTGCTACAAATGCCATTCTAAATATGGTG
AATATTGCTGCTAATATTCTGGGAGCAAAAACTGAAGACTTGACAGAAGGAAATAAAAGTATAT
CTGAGAATGCCACTGCCACAACTGAACCTAAAATGCCTGAATCAACTGGTGTTTCAACTCCTGT
TCCATCGCCTGAATATATAATCAAGGAAGTCCATACACATGATACAGAACCACCAACCTCAGAT
CCTCCAAAGGAGAGTCCGATTGTACAGCTGGTTCAGGAGGAAGAGGAGGAAGCAAGCCCATCTA
CAGTGACCCTTCTGGGCAGCGGCGAACAGGAGGATGAGTCCTCATCCTGGTTTGAGTCTGAGAC
ACAAATACTTTGTAGTGAACTGACTTCAATTTGTTGTATTTCTAGTTTTTCGGAGTACTTATAT
AAATGGTGCTCAGTTAGAATCGCTCTTTATCGACAACACAGCAGAACTGTGAGTAAAGGAAAAG
ATGTGTCACCTCAGCCATCGTTACTCCCTCCTGTAGACTCAGTAGAAGTTTCAGTACTGCAGCC
TCCCAGTGGAGATGTGGATAAGGAGGACATGGAAAGAGAATTGGAGACTGTGGCTCTGGATGAT
TTAAGTAGTGTGCACCAGGCTCATGTGAGGAATCACACAGTGGATACAGTTGAACTTGAACCAA
GCTACCCTCAAACTCTTTCTCAGTCCCTTCCCTTAGACGTTACTCCAGAAATGGATTCACTGTC
TACAGTAGAAGGATCTGAGTCTGTTAAATCTGAGGGAGGACATAAACCATCGCAAGTCATGCCC
CAAGAGAGTTCTGTCGAGTTTGATGACGAAACAGAAAAAAAGCCTGAGAGCTTTAGTTCTGTTG
CGAAGCTCTCTGTTATTTATGAAACAAGTAAAGTTAACGAGGTAATGGACGGTACTGTGAAAGA
AGACATAGTCTCCACACACGTGGTCACCAAGTTCCCTGAAACCAAGTTCCCTGAAACAGTAGCA
CCACCCCCTATAAACACAGCCGCTGTGCCTGAGAGTGAAGGCATGGAAACCAAACCTAGTTTAG
CTGATACACTAAAGCACGTAGTGACGCCCGTTACAGATCCTTCATTGCCTGAAGTGAAAGAGGA
TGAGCAGTCTCCAGACGATGCCCTTTTAAGAGGGTTACAGAGGACAGCTACAGATTTCTATGCT
GAACTACAAAATTCTACAGATCTGGGATATGGTAATGGAAACCTTGTACATGGATCAAATCAGA
AGGAGTCAGTATTTATGAGACTTAATAATCGTATTAAAGCCTTAGAAGTTAACATGTCTCTCAG
TGGTCGTTATCTGGAGGAGCTTAGTCAAAGGTACCGAAAACAAATGGAAGAAATGCAAAAGGCT
TTCAATAAAACAATAGTTAAGCTTCAGAATACTTCACGGATAGCAGAAGAGCAGGATCAGCGGC
AAACTGAAGCCATCCACTTGCTGCAGGCACAACTGACCAACATGACACAGATTGTTTCAAACTT
GTCAGCAACTGTAGCAGAATTAAAACGGGAGGTTTCAGATCGTCAGAGTTACCTTGTCATGTCT
TTGGTTCTATGTGTGGTCTTGGGACTGATGCTCTGTATGCAACGTTGTCGAAATACTTCTCAAT
TTGATGGAGATTACACTTCAAAACTTCCTAAAAGTAATCAGTACCCAAGCCCTAAAAGGTGTTT
TTCCTCCTATGATGACATGAATTTGAAAAGAAGAACCTCATTTCCCCTCATCAGATCCAAGTCT
TTGCAGTTTACTGGCAAAGAAGTAGACCCGAATGATTTGTACATCGTAGAACCCCTCAAGTTCT
CTCCAGAGAAAAAGAAGAAACGTTGCAAGTACAAAACTGAAAAAATTGAGACAATAAAGCCTGC
AGATCCATTGCACCCTATAGCCAATGGAGATATAAAAGGAAGAAAGCCCTTTACGAACCAGAGA
GATTTTTCTAGTATGGGAGAAGTTTATCACTCTTCTTACAAGGGCCCTCCGTCTGAGGGAAGCT
CAGAAACTTCATCACAGTCAGAAGAGTCCTATTTTTGTGGCATTTCCGCTTGTACAAGTCTGTG
CAATGGACAGACCCAAAAGACAAAAACTGAGAAGAGGGCTTTAAAACGAAGGCGATCTAAAGTC
CAAGACCAAGGAAAGTTAATAAAAGCTCTTATACAGACTAAGTCGGGGTCATTGCCGAGCCTGC
ATGACATAATCAAAGGAAACAAGGAGATCACCGTGGGAGCATTTGGGGTTACAGCAGTCTCGGG
ACATATCTAAAAGGAGCTGAACATTTATACTGAGGACTTTTTGTTGTTCTTTGAAGAACAGCCT
GTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATATTGGGGAAAGTATTCAGAAATTATGTTT
TTTTTATTTTGCCTTTTAAAAAAGTAGACAGGATTGCGTCAATCTTGCTGATGAACTGCAGTTT
TACGAGGCTGATCTCTTCCTATGAGGATGATGATAGACATTTTATAAAGATGTGTTTTCACAGA
GAATTACTGGGACAAAAGTAATTTGGAAGCCCAGTTCCTTGGGTGGATAGGAATGAAAGCCTAA
ACCTCTCCCTTCAGCTTGGTTCCCGTTTCTTGCACCTTCCCATATTTATGTGCCTTTTGTCTAT
TTATAATGCCACTGGAAGAGGAGGGAGAACTTTTTCTGTCAGTTGATTTGTTTTGTAACTTTAT
TAGGTTTTTGAAGCTGCAACACTACAAAGCTTTAAGGTGGTCCATGCCAGAAGCCCAGCAACGT
GGGTCATTTGCATAAAGATCCTAAAGACTTCCAACTTAGAATCGCTCAGTAGTCTCACTGGAAT
AAACACTTGCTGAAGTTTCTAACGGCCTTTCAGATAAAAGGTGATGAGTTCACCCTGGGTCTTA
TTTAATTTAGTTGGATTGGGTTATGCTTTTTTCCCTGAGTTTTTAACTCAGTAAAATGGTAAGA
TATTTTCTTGAAAATGACAGGTATTTGAAACAAATTTATTATAAATTCACCTTTAAACACACTT
AAGTATTTGTGATGATTTCTTTACATTGCATTCTAAATGTTCACAGTAAACACTAATCCTCCAA
ATTTTCACATCATCAAGACCATGTTTTCATGGTCCAGTCACTCACTGCCTTTGTACATAGTCAC
AGCCAGCCAGTGAGCACGTCAGGCCTGATTCAGTCTAATTGGTGAAGTCTAGTAGGATTATGAT
TCCTTTGTGTTTGCTTTTGTTGGCTACAATGTGCAGATATGTGTGTATGTGGTTGTCAGCGTTT
GTCTTCATTTACTTTTTGTCCCCCCACCCCCCCCCTTAAGTAATTGGCAGTGTCTGTCTGAGTA
AATTGAGTTCTTGATGTGTGGATTGTACAGGGATGAGTGAAAGTGAAATGTGTTTTTGAGAGAA
TTGACCATTTTGTGTTGTAAAATTTAAGTTATAACTTATTGAGCACTTTTGTTAATAATTGTTT
TTAAATTTGTCTAATACCTTTTTTGGTGTTGTTTGTAATGTGATTTATTTAAGGCCTTTTTCTT
TAAGTTGCTGCTTTAGGTGAACAGTACGTTTTAGGAAATGAATTTTACCCCTTCCAGTCTGCAC
AATTAGCCATTCAGAGCAATAGGGCCTGATGGTACAGCAGGCCCTTGAAGTCCAGATGCCAGCA
GAGCCAGAGTGGGAAGTCACTATGTGTTGTGAAAAGAGGGTTTTAAATATGTAACTACAGAGCT
GTAGTACCATTAGAAACTGTGAATTTCCAAATAAATCTGAACACTTGTCTTTATTAA

hide sequence

RefSeq Acc Id:

XM_006250166 ⟹ XP_006250228

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,726,095 - 76,790,796 (-)	NCBI
mRatBN7.2	13	74,192,808 - 74,257,519 (-)	NCBI
Rnor_6.0	13	79,736,485 - 79,801,133 (-)	NCBI
Rnor_5.0	13	84,629,768 - 84,694,850 (-)	NCBI

Sequence:

show sequence

AGGGGGAAGAAGGAGGAGAAGATGAAGAAGTACCGGCGGGCCTTGGCCCTGGTCTCCTGCCTCT
CTCTCTGCTCTCTAGTCTGGCTTCCAAGTTGGCATGTATGCTGTAAAGAGAGTTCTTCAGCTTC
AACATCATACTATTCTCAAGATGATAATTGTGCAGTAGGAAGTGAAGACATACAGTTCCAGAAA
AAGAATGAAAGAGAAGAACCTAGTAATGCTAAAGTATCAGAAAAATCAAATTCATATTTAACTA
TATCTCCAGAAGAAAATAAATTAAAAGATGACTACACTGTGGATGAACAAAATATGGAAACAGC
GAAGTTAAGTCTACCTGTGGTTGAAGCACTCCCTACAGTTGATTCGCATGAAGAGTCTTCCAGT
GTAGTTGTAGGCAGTGAAAACATCGAAAATAGTTCCAGTTCATCTACCTCAGAAACGACTCCAA
TCTCAAAGCTTGATGAAATAGAAAACTCTGGTACTTTATCTGTAGCCAAGCCAGGTGACACAGA
GCAGCCTGAAGCTGACTGTGATGCTGGGGAGGCTGCGGACGCAGATGCTTCCGTGGAGCAGCCT
GCTTTCGTCAGTGCACCGGAGAGCCTTGTTGGCCAACATATAGAGAACGTGTCGTCTTCACATG
GCAAAGAAAAAGTAACAAAATCAGAGTTTGAATCAAAAGTTTCAGTGAGTGAACAAGATGGCGG
TGATCCAAAGTCTGCATTGAATGCTTCAGATACTTTAAAAAATGAGAGCTCTGATTATACAAAA
CCACGAGAAACTGACCCTACATCTGTTACAAGTCCCAAAGACCCAGAAGATATACCCACATTTG
ATGAGTGGAAGAAGAAAGTTATGGAAGTAGAGAAAGAAAAAAGTCAGTCGTTGCACCCATCTTC
TAATGGAGGTCCACATGCCACCAAAAAGGTCCAGAAAAATAGAAATAATTATGCCTCTGTAGAA
TGCGGTGCCAAAATTTTGGCAGCTAATCCGGAAGCCAAGAGCACATCTGCTATTCTTATAGAAA
ATATGGATCTTTATATGCTGAATCCTTGCAGCACTAAAATATGGTTTGTTATTGAGCTTTGTGA
GCCAATTCAAGTGAAACAGTTTGATATTGCAAATTATGAATTATTTTCTTCTACTCCCAAAGAC
TTTCTGGTTTCTATCAGTGACAGATATCCCACAAATAAATGGATTAAGCTGGGTACTTTCCATG
GTAGAGATGAGCGGACTGTCCAAAGTTTCCCCCTGGATGAACAGATGTATGCAAAATATGTGAA
GGTGGAGCTGTTGTCTCATTTTGGATCAGAGCACTTCTGTCCTTTAAGCCTAATAAGGGTTTTC
GGTACTAGTATGGTGGAAGAATATGAGGAAATTGCTGACTCCCAGTATCAATCAGAGCGTCAGG
AACTATTTGATGAGGACTATGACTATCCCCTGGATTATAATACTGTGGAGGATAAATCTTCAAA
GAATCTTCTTGGTTCTGCTACAAATGCCATTCTAAATATGGTGAATATTGCTGCTAATATTCTG
GGAGCAAAAACTGAAGACTTGACAGAAGGAAATAAAAGTATATCTGAGAATGCCACTGCCACAA
CTGAACCTAAAATGCCTGAATCAACTGGTGTTTCAACTCCTGTTCCATCGCCTGAATATATAAT
CAAGGAAGTCCATACACATGATACAGAACCACCAACCTCAGATCCTCCAAAGGAGAGTCCGATT
GTACAGCTGGTTCAGGAGGAAGAGGAGGAAGCAAGCCCATCTACAGTGACCCTTCTGGGCAGCG
GCGAACAGGAGGATGAGTCCTCATCCTGGTTTGAGTCTGAGACACAAATACTTTGTAGTGAACT
GACTTCAATTTGTTGTATTTCTAGTTTTTCGGAGTACTTATATAAATGGTGCTCAGTTAGAATC
GCTCTTTATCGACAACACAGCAGAACTGTGAGTAAAGGAAAAGATGTGTCACCTCAGCCATCGT
TACTCCCTCCTGTAGACTCAGTAGAAGTTTCAGTACTGCAGCCTCCCAGTGGAGATGTGGATAA
GGAGGACATGGAAAGAGAATTGGAGACTGTGGCTCTGGATGATTTAAGTAGTGTGCACCAGGCT
CATGTGAGGAATCACACAGTGGATACAGTTGAACTTGAACCAAGCTACCCTCAAACTCTTTCTC
AGTCCCTTCCCTTAGACGTTACTCCAGAAATGGATTCACTGTCTACAGTAGAAGGATCTGAGTC
TGTTAAATCTGAGGGAGGACATAAACCATCGCAAGTCATGCCCCAAGAGAGTTCTGTCGAGTTT
GATGACGAAACAGAAAAAAAGCCTGAGAGCTTTAGTTCTGTTGCGAAGCTCTCTGTTATTTATG
AAACAAGTAAAGTTAACGAGGTAATGGACGGTACTGTGAAAGAAGACATAGTCTCCACACACGT
GGTCACCAAGTTCCCTGAAACCAAGTTCCCTGAAACAGTAGCACCACCCCCTATAAACACAGCC
GCTGTGCCTGAGAGTGAAGGCATGGAAACCAAACCTAGTTTAGCTGATACACTAAAGCACGTAG
TGACGCCCGTTACAGATCCTTCATTGCCTGAAGTGAAAGAGGATGAGCAGTCTCCAGACGATGC
CCTTTTAAGAGGGTTACAGAGGACAGCTACAGATTTCTATGCTGAACTACAAAATTCTACAGAT
CTGGGATATGGTAATGGAAACCTTGTACATGGATCAAATCAGAAGGAGTCAGTATTTATGAGAC
TTAATAATCGTATTAAAGCCTTAGAAGTTAACATGTCTCTCAGTGGTCGTTATCTGGAGGAGCT
TAGTCAAAGGTACCGAAAACAAATGGAAGAAATGCAAAAGGCTTTCAATAAAACAATAGTTAAG
CTTCAGAATACTTCACGGATAGCAGAAGAGCAGGATCAGCGGCAAACTGAAGCCATCCACTTGC
TGCAGGCACAACTGACCAACATGACACAGATTGTTTCAAACTTGTCAGCAACTGTAGCAGAATT
AAAACGGGAGGTTTCAGATCGTCAGAGTTACCTTGTCATGTCTTTGGTTCTATGTGTGGTCTTG
GGACTGATGCTCTGTATGCAACGTTGTCGAAATACTTCTCAATTTGATGGAGATTACACTTCAA
AACTTCCTAAAAGTAATCAGTACCCAAGCCCTAAAAGGTGTTTTTCCTCCTATGATGACATGAA
TTTGAAAAGAAGAACCTCATTTCCCCTCATCAGATCCAAGTCTTTGCAGTTTACTGGCAAAGAA
GTAGACCCGAATGATTTGTACATCGTAGAACCCCTCAAGTTCTCTCCAGAGAAAAAGAAGAAAC
GTTGCAAGTACAAAACTGAAAAAATTGAGACAATAAAGCCTGCAGATCCATTGCACCCTATAGC
CAATGGAGATATAAAAGGAAGAAAGCCCTTTACGAACCAGAGAGATTTTTCTAGTATGGGAGAA
GTTTATCACTCTTCTTACAAGGGCCCTCCGTCTGAGGGAAGCTCAGAAACTTCATCACAGTCAG
AAGAGTCCTATTTTTGTGGCATTTCCGCTTGTACAAGTCTGTGCAATGGACAGACCCAAAAGAC
AAAAACTGAGAAGAGGGCTTTAAAACGAAGGCGATCTAAAGTCCAAGACCAAGGAAAGTTAATA
AAAGCTCTTATACAGACTAAGTCGGGGTCATTGCCGAGCCTGCATGACATAATCAAAGGAAACA
AGGAGATCACCGTGGGAGCATTTGGGGTTACAGCAGTCTCGGGACATATCTAAAAGGAGCTGAA
CATTTATACTGAGGACTTTTTGTTGTTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGG
GGGAGGGATAAAATATTGGGGAAAGTATTCAGAAATTATGTTTTTTTTATTTTGCCTTTTAAAA
AAGTAGACAGGATTGCGTCAATCTTGCTGATGAACTGCAGTTTTACGAGGCTGATCTCTTCCTA
TGAGGATGATGATAGACATTTTATAAAGATGTGTTTTCACAGAGAATTACTGGGACAAAAGTAA
TTTGGAAGCCCAGTTCCTTGGGTGGATAGGAATGAAAGCCTAAACCTCTCCCTTCAGCTTGGTT
CCCGTTTCTTGCACCTTCCCATATTTATGTGCCTTTTGTCTATTTATAATGCCACTGGAAGAGG
AGGGAGAACTTTTTCTGTCAGTTGATTTGTTTTGTAACTTTATTAGGTTTTTGAAGCTGCAACA
CTACAAAGCTTTAAGGTGGTCCATGCCAGAAGCCCAGCAACGTGGGTCATTTGCATAAAGATCC
TAAAGACTTCCAACTTAGAATCGCTCAGTAGTCTCACTGGAATAAACACTTGCTGAAGTTTCTA
ACGGCCTTTCAGATAAAAGGTGATGAGTTCACCCTGGGTCTTATTTAATTTAGTTGGATTGGGT
TATGCTTTTTTCCCTGAGTTTTTAACTCAGTAAAATGGTAAGATATTTTCTTGAAAATGACAGG
TATTTGAAACAAATTTATTATAAATTCACCTTTAAACACACTTAAGTATTTGTGATGATTTCTT
TACATTGCATTCTAAATGTTCACAGTAAACACTAATCCTCCAAATTTTCACATCATCAAGACCA
TGTTTTCATGGTCCAGTCACTCACTGCCTTTGTACATAGTCACAGCCAGCCAGTGAGCACGTCA
GGCCTGATTCAGTCTAATTGGTGAAGTCTAGTAGGATTATGATTCCTTTGTGTTTGCTTTTGTT
GGCTACAATGTGCAGATATGTGTGTATGTGGTTGTCAGCGTTTGTCTTCATTTACTTTTTGTCC
CCCCACCCCCCCCCTTAAGTAATTGGCAGTGTCTGTCTGAGTAAATTGAGTTCTTGATGTGTGG
ATTGTACAGGGATGAGTGAAAGTGAAATGTGTTTTTGAGAGAATTGACCATTTTGTGTTGTAAA
ATTTAAGTTATAACTTATTGAGCACTTTTGTTAATAATTGTTTTTAAATTTGTCTAATACCTTT
TTTGGTGTTGTTTGTAATGTGATTTATTTAAGGCCTTTTTCTTTAAGTTGCTGCTTTAGGTGAA
CAGTACGTTTTAGGAAATGAATTTTACCCCTTCCAGTCTGCACAATTAGCCATTCAGAGCAATA
GGGCCTGATGGTACAGCAGGCCCTTGAAGTCCAGATGCCAGCAGAGCCAGAGTGGGAAGTCACT
ATGTGTTGTGAAAAGAGGGTTTTAAATATGTAACTACAGAGCTGTAGTACCATTAGAAACTGTG
AATTTCCAAATAAATCTGAACACTTGTCTTTATTAA

hide sequence

RefSeq Acc Id:

XM_008769657 ⟹ XP_008767879

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,726,095 - 76,790,796 (-)	NCBI
mRatBN7.2	13	74,192,808 - 74,257,519 (-)	NCBI
Rnor_6.0	13	79,736,485 - 79,801,133 (-)	NCBI

Sequence:

show sequence

AGGGGGAAGAAGGAGGAGAAGATGAAGAAGTACCGGCGGGCCTTGGCCCTGGTCTCCTGCCTCT
CTCTCTGCTCTCTAGTCTGGCTTCCAAGTTGGCATGTATGCTGTAAAGAGAGTTCTTCAGCTTC
AACATCATACTATTCTCAAGATGATAATTGTGCAGTAGGAAGTGAAGACATACAGTTCCAGAAA
AAGAATGAAAGAGAAGAACCTAGTAATGCTAAAGTATCAGAAAAATCAAATTCATATTTAACTA
TATCTCCAGAAGAAAATAAATTAAAAGATGACTACACTGTGGATGAACAAAATATGGAAACAGC
GAAGTTAAGTCTACCTGTGGTTGAAGCACTCCCTACAGTTGATTCGCATGAAGAGTCTTCCAGT
GTAGTTGTAGGCAGTGAAAACATCGAAAATAGTTCCAGTTCATCTACCTCAGAAACGACTCCAA
TCTCAAAGCTTGATGAAATAGAAAACTCTGGTACTTTATCTGTAGCCAAGCCAGGTGACACAGA
GCAGCCTGAAGCTGACTGTGATGCTGGGGAGGCTGCGGACGCAGATGCTTCCGTGGAGCAGCCT
GCTTTCGTCAGTGCACCGGAGAGCCTTGTTGGCCAACATATAGAGAACGTGTCGTCTTCACATG
GCAAAGAAAAAGTAACAAAATCAGAGTTTGAATCAAAAGTTTCAGTGAGTGAACAAGATGGCGG
TGATCCAAAGTCTGCATTGAATGCTTCAGATACTTTAAAAAATGAGAGCTCTGATTATACAAAA
CCACGAGAAACTGACCCTACATCTGTTACAAGTCCCAAAGACCCAGAAGATATACCCACATTTG
ATGAGTGGAAGAAGAAAGTTATGGAAGTAGAGAAAGAAAAAAGTCTGTCTACAGGTCAGTCGTT
GCACCCATCTTCTAATGGAGGTCCACATGCCACCAAAAAGGTCCAGAAAAATAGAAATAATTAT
GCCTCTGTAGAATGCGGTGCCAAAATTTTGGCAGCTAATCCGGAAGCCAAGAGCACATCTGCTA
TTCTTATAGAAAATATGGATCTTTATATGCTGAATCCTTGCAGCACTAAAATATGGTTTGTTAT
TGAGCTTTGTGAGCCAATTCAAGTGAAACAGTTTGATATTGCAAATTATGAATTATTTTCTTCT
ACTCCCAAAGACTTTCTGGTTTCTATCAGTGACAGATATCCCACAAATAAATGGATTAAGCTGG
GTACTTTCCATGGTAGAGATGAGCGGACTGTCCAAAGTTTCCCCCTGGATGAACAGATGTATGC
AAAATATGTGAAGATGTTCATCAAGTACATAAAGGTGGAGCTGTTGTCTCATTTTGGATCAGAG
CACTTCTGTCCTTTAAGCCTAATAAGGGTTTTCGGTACTAGTATGGTGGAAGAATATGAGGAAA
TTGCTGACTCCCAGTATCAATCAGAGCGTCAGGAACTATTTGATGAGGACTATGACTATCCCCT
GGATTATAATACTGTGGAGGATAAATCTTCAAAGAATCTTCTTGGTTCTGCTACAAATGCCATT
CTAAATATGGTGAATATTGCTGCTAATATTCTGGGAGCAAAAACTGAAGACTTGACAGAAGGAA
ATAAAAGTATATCTGAGAATGCCACTGCCACAACTGAACCTAAAATGCCTGAATCAACTGGTGT
TTCAACTCCTGTTCCATCGCCTGAATATATAATCAAGGAAGTCCATACACATGATACAGAACCA
CCAACCTCAGATCCTCCAAAGGAGAGTCCGATTGTACAGCTGGTTCAGGAGGAAGAGGAGGAAG
CAAGCCCATCTACAGTGACCCTTCTGGGCAGCGGCGAACAGGAGGATGAGTCCTCATCCTGGTT
TGAGTCTGAGACACAAATACTTTGTAGTGAACTGACTTCAATTTGTTGTATTTCTAGTTTTTCG
GAGTACTTATATAAATGGTGCTCAGTTAGAATCGCTCTTTATCGACAACACAGCAGAACTGTGA
GTAAAGGAAAAGATGTGTCACCTCAGCCATCGTTACTCCCTCCTGTAGACTCAGTAGAAGTTTC
AGTACTGCAGCCTCCCAGTGGAGATGTGGATAAGGAGGACATGGAAAGAGAATTGGAGACTGTG
GCTCTGGATGATTTAAGTAGTGTGCACCAGGCTCATGTGAGGAATCACACAGTGGATACAGTTG
AACTTGAACCAAGCTACCCTCAAACTCTTTCTCAGTCCCTTCCCTTAGACGTTACTCCAGAAAT
GGATTCACTGTCTACAGTAGAAGGATCTGAGTCTGTTAAATCTGAGGGAGGACATAAACCATCG
CAAGTCATGCCCCAAGAGAGTTCTGTCGAGTTTGATGACGAAACAGAAAAAAAGCCTGAGAGCT
TTAGTTCTGTTGCGAAGCTCTCTGTTATTTATGAAACAAGTAAAGTTAACGAGGTAATGGACGG
TACTGTGAAAGAAGACATAGTCTCCACACACGTGGTCACCAAGTTCCCTGAAACCAAGTTCCCT
GAAACAGTAGCACCACCCCCTATAAACACAGCCGCTGTGCCTGAGAGTGAAGGCATGGAAACCA
AACCTAGTTTAGCTGATACACTAAAGCACGTAGTGACGCCCGTTACAGATCCTTCATTGCCTGA
AGTGAAAGAGGATGAGCAGTCTCCAGACGATGCCCTTTTAAGAGGGTTACAGAGGACAGCTACA
GATTTCTATGCTGAACTACAAAATTCTACAGATCTGGGATATGGTAATGGAAACCTTGTACATG
GATCAAATCAGAAGGAGTCAGTATTTATGAGACTTAATAATCGTATTAAAGCCTTAGAAGTTAA
CATGTCTCTCAGTGGTCGTTATCTGGAGGAGCTTAGTCAAAGGTACCGAAAACAAATGGAAGAA
ATGCAAAAGGCTTTCAATAAAACAATAGTTAAGCTTCAGAATACTTCACGGATAGCAGAAGAGC
AGGATCAGCGGCAAACTGAAGCCATCCACTTGCTGCAGGCACAACTGACCAACATGACACAGAT
TGTTTCAAACTTGTCAGCAACTGTAGCAGAATTAAAACGGGAGGTTTCAGATCGTCAGAGTTAC
CTTGTCATGTCTTTGGTTCTATGTGTGGTCTTGGGACTGATGCTCTGTATGCAACGTTGTCGAA
ATACTTCTCAATTTGATGGAGATTACACTTCAAAACTTCCTAAAAGTAATCAGTACCCAAGCCC
TAAAAGGTGTTTTTCCTCCTATGATGACATGAATTTGAAAAGAAGAACCTCATTTCCCCTCATC
AGATCCAAGTCTTTGCAGTTTACTGGCAAAGAAGTAGACCCGAATGATTTGTACATCGTAGAAC
CCCTCAAGTTCTCTCCAGAGAAAAAGAAGAAACGTTGCAAGTACAAAACTGAAAAAATTGAGAC
AATAAAGCCTGCAGATCCATTGCACCCTATAGCCAATGGAGATATAAAAGGAAGAAAGCCCTTT
ACGAACCAGAGAGATTTTTCTAGTATGGGAGAAGTTTATCACTCTTCTTACAAGGGCCCTCCGT
CTGAGGGAAGCTCAGAAACTTCATCACAGTCAGAAGAGTCCTATTTTTGTGGCATTTCCGCTTG
TACAAGTCTGTGCAATGGACAGACCCAAAAGACAAAAACTGAGAAGAGGGCTTTAAAACGAAGG
CGATCTAAAGTCCAAGACCAAGGAAAGTTAATAAAAGCTCTTATACAGACTAAGTCGGGGTCAT
TGCCGAGCCTGCATGACATAATCAAAGGAAACAAGGAGATCACCGTGGGAGCATTTGGGGTTAC
AGCAGTCTCGGGACATATCTAAAAGGAGCTGAACATTTATACTGAGGACTTTTTGTTGTTCTTT
GAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATATTGGGGAAAGTATTCA
GAAATTATGTTTTTTTTATTTTGCCTTTTAAAAAAGTAGACAGGATTGCGTCAATCTTGCTGAT
GAACTGCAGTTTTACGAGGCTGATCTCTTCCTATGAGGATGATGATAGACATTTTATAAAGATG
TGTTTTCACAGAGAATTACTGGGACAAAAGTAATTTGGAAGCCCAGTTCCTTGGGTGGATAGGA
ATGAAAGCCTAAACCTCTCCCTTCAGCTTGGTTCCCGTTTCTTGCACCTTCCCATATTTATGTG
CCTTTTGTCTATTTATAATGCCACTGGAAGAGGAGGGAGAACTTTTTCTGTCAGTTGATTTGTT
TTGTAACTTTATTAGGTTTTTGAAGCTGCAACACTACAAAGCTTTAAGGTGGTCCATGCCAGAA
GCCCAGCAACGTGGGTCATTTGCATAAAGATCCTAAAGACTTCCAACTTAGAATCGCTCAGTAG
TCTCACTGGAATAAACACTTGCTGAAGTTTCTAACGGCCTTTCAGATAAAAGGTGATGAGTTCA
CCCTGGGTCTTATTTAATTTAGTTGGATTGGGTTATGCTTTTTTCCCTGAGTTTTTAACTCAGT
AAAATGGTAAGATATTTTCTTGAAAATGACAGGTATTTGAAACAAATTTATTATAAATTCACCT
TTAAACACACTTAAGTATTTGTGATGATTTCTTTACATTGCATTCTAAATGTTCACAGTAAACA
CTAATCCTCCAAATTTTCACATCATCAAGACCATGTTTTCATGGTCCAGTCACTCACTGCCTTT
GTACATAGTCACAGCCAGCCAGTGAGCACGTCAGGCCTGATTCAGTCTAATTGGTGAAGTCTAG
TAGGATTATGATTCCTTTGTGTTTGCTTTTGTTGGCTACAATGTGCAGATATGTGTGTATGTGG
TTGTCAGCGTTTGTCTTCATTTACTTTTTGTCCCCCCACCCCCCCCCTTAAGTAATTGGCAGTG
TCTGTCTGAGTAAATTGAGTTCTTGATGTGTGGATTGTACAGGGATGAGTGAAAGTGAAATGTG
TTTTTGAGAGAATTGACCATTTTGTGTTGTAAAATTTAAGTTATAACTTATTGAGCACTTTTGT
TAATAATTGTTTTTAAATTTGTCTAATACCTTTTTTGGTGTTGTTTGTAATGTGATTTATTTAA
GGCCTTTTTCTTTAAGTTGCTGCTTTAGGTGAACAGTACGTTTTAGGAAATGAATTTTACCCCT
TCCAGTCTGCACAATTAGCCATTCAGAGCAATAGGGCCTGATGGTACAGCAGGCCCTTGAAGTC
CAGATGCCAGCAGAGCCAGAGTGGGAAGTCACTATGTGTTGTGAAAAGAGGGTTTTAAATATGT
AACTACAGAGCTGTAGTACCATTAGAAACTGTGAATTTCCAAATAAATCTGAACACTTGTCTTT
ATTAA

hide sequence

RefSeq Acc Id:

XM_008769658 ⟹ XP_008767880

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,726,095 - 76,790,796 (-)	NCBI
mRatBN7.2	13	74,192,808 - 74,257,519 (-)	NCBI
Rnor_6.0	13	79,736,485 - 79,801,133 (-)	NCBI

Sequence:

show sequence

AGGGGGAAGAAGGAGGAGAAGATGAAGAAGTACCGGCGGGCCTTGGCCCTGGTCTCCTGCCTCT
CTCTCTGCTCTCTAGTCTGGCTTCCAAGTTGGCATGTATGCTGTAAAGAGAGTTCTTCAGCTTC
AACATCATACTATTCTCAAGATGATAATTGTGCAGTAGGAAGTGAAGACATACAGTTCCAGAAA
AAGAATGAAAGAGAAGAACCTAGTAATGCTAAAGTATCAGAAAAATCAAATTCATATTTAACTA
TATCTCCAGAAGAAAATAAATTAAAAGATGACTACACTGTGGATGAACAAAATATGGAAACAGC
GAAGTTAAGTCTACCTGTGGTTGAAGCACTCCCTACAGTTGATTCGCATGAAGAGTCTTCCAGT
GTAGTTGTAGGCAGTGAAAACATCGAAAATAGTTCCAGTTCATCTACCTCAGAAACGACTCCAA
TCTCAAAGCTTGATGAAATAGAAAACTCTGGTACTTTATCTGTAGCCAAGCCAGGTGACACAGA
GCAGCCTGAAGCTGACTGTGATGCTGGGGAGGCTGCGGACGCAGATGCTTCCGTGGAGCAGCCT
GCTTTCGTCAGTGCACCGGAGAGCCTTGTTGGCCAACATATAGAGAACGTGTCGTCTTCACATG
GCAAAGAAAAAGTAACAAAATCAGAGTTTGAATCAAAAGTTTCAGTGAGTGAACAAGATGGCGG
TGATCCAAAGTCTGCATTGAATGCTTCAGATACTTTAAAAAATGAGAGCTCTGATTATACAAAA
CCACGAGAAACTGACCCTACATCTGTTACAAGTCCCAAAGACCCAGAAGATATACCCACATTTG
ATGAGTGGAAGAAGAAAGTTATGGAAGTAGAGAAAGAAAAAAGTCTGTCTACAGGTCAGTCGTT
GCACCCATCTTCTAATGGAGGTCCACATGCCACCAAAAAGGTCCAGAAAAATAGAAATAATTAT
GCCTCTGTAGAATGCGGTGCCAAAATTTTGGCAGCTAATCCGGAAGCCAAGAGCACATCTGCTA
TTCTTATAGAAAATATGGATCTTTATATGCTGAATCCTTGCAGCACTAAAATATGGTTTGTTAT
TGAGCTTTGTGAGCCAATTCAAGTGAAACAGTTTGATATTGCAAATTATGAATTATTTTCTTCT
ACTCCCAAAGACTTTCTGGTTTCTATCAGTGACAGATATCCCACAAATAAATGGATTAAGCTGG
GTACTTTCCATGGTAGAGATGAGCGGACTGTCCAAAGTTTCCCCCTGGATGAACAGATGTATGC
AAAATATGTGAAGGTGGAGCTGTTGTCTCATTTTGGATCAGAGCACTTCTGTCCTTTAAGCCTA
ATAAGGGTTTTCGGTACTAGTATGGTGGAAGAATATGAGGAAATTGCTGACTCCCAGTATCAAT
CAGAGCGTCAGGAACTATTTGATGAGGACTATGACTATCCCCTGGATTATAATACTGTGGAGGA
TAAATCTTCAAAGAATCTTCTTGGTTCTGCTACAAATGCCATTCTAAATATGGTGAATATTGCT
GCTAATATTCTGGGAGCAAAAACTGAAGACTTGACAGAAGGAAATAAAAGTATATCTGAGAATG
CCACTGCCACAACTGAACCTAAAATGCCTGAATCAACTGGTGTTTCAACTCCTGTTCCATCGCC
TGAATATATAATCAAGGAAGTCCATACACATGATACAGAACCACCAACCTCAGATCCTCCAAAG
GAGAGTCCGATTGTACAGCTGGTTCAGGAGGAAGAGGAGGAAGCAAGCCCATCTACAGTGACCC
TTCTGGGCAGCGGCGAACAGGAGGATGAGTCCTCATCCTGGTTTGAGTCTGAGACACAAATACT
TTGTAGTGAACTGACTTCAATTTGTTGTATTTCTAGTTTTTCGGAGTACTTATATAAATGGTGC
TCAGTTAGAATCGCTCTTTATCGACAACACAGCAGAACTGTGAGTAAAGGAAAAGATGTGTCAC
CTCAGCCATCGTTACTCCCTCCTGTAGACTCAGTAGAAGTTTCAGTACTGCAGCCTCCCAGTGG
AGATGTGGATAAGGAGGACATGGAAAGAGAATTGGAGACTGTGGCTCTGGATGATTTAAGTAGT
GTGCACCAGGCTCATGTGAGGAATCACACAGTGGATACAGTTGAACTTGAACCAAGCTACCCTC
AAACTCTTTCTCAGTCCCTTCCCTTAGACGTTACTCCAGAAATGGATTCACTGTCTACAGTAGA
AGGATCTGAGTCTGTTAAATCTGAGGGAGGACATAAACCATCGCAAGTCATGCCCCAAGAGAGT
TCTGTCGAGTTTGATGACGAAACAGAAAAAAAGCCTGAGAGCTTTAGTTCTGTTGCGAAGCTCT
CTGTTATTTATGAAACAAGTAAAGTTAACGAGGTAATGGACGGTACTGTGAAAGAAGACATAGT
CTCCACACACGTGGTCACCAAGTTCCCTGAAACCAAGTTCCCTGAAACAGTAGCACCACCCCCT
ATAAACACAGCCGCTGTGCCTGAGAGTGAAGGCATGGAAACCAAACCTAGTTTAGCTGATACAC
TAAAGCACGTAGTGACGCCCGTTACAGATCCTTCATTGCCTGAAGTGAAAGAGGATGAGCAGTC
TCCAGACGATGCCCTTTTAAGAGGGTTACAGAGGACAGCTACAGATTTCTATGCTGAACTACAA
AATTCTACAGATCTGGGATATGGTAATGGAAACCTTGTACATGGATCAAATCAGAAGGAGTCAG
TATTTATGAGACTTAATAATCGTATTAAAGCCTTAGAAGTTAACATGTCTCTCAGTGGTCGTTA
TCTGGAGGAGCTTAGTCAAAGGTACCGAAAACAAATGGAAGAAATGCAAAAGGCTTTCAATAAA
ACAATAGTTAAGCTTCAGAATACTTCACGGATAGCAGAAGAGCAGGATCAGCGGCAAACTGAAG
CCATCCACTTGCTGCAGGCACAACTGACCAACATGACACAGATTGTTTCAAACTTGTCAGCAAC
TGTAGCAGAATTAAAACGGGAGGTTTCAGATCGTCAGAGTTACCTTGTCATGTCTTTGGTTCTA
TGTGTGGTCTTGGGACTGATGCTCTGTATGCAACGTTGTCGAAATACTTCTCAATTTGATGGAG
ATTACACTTCAAAACTTCCTAAAAGTAATCAGTACCCAAGCCCTAAAAGGTGTTTTTCCTCCTA
TGATGACATGAATTTGAAAAGAAGAACCTCATTTCCCCTCATCAGATCCAAGTCTTTGCAGTTT
ACTGGCAAAGAAGTAGACCCGAATGATTTGTACATCGTAGAACCCCTCAAGTTCTCTCCAGAGA
AAAAGAAGAAACGTTGCAAGTACAAAACTGAAAAAATTGAGACAATAAAGCCTGCAGATCCATT
GCACCCTATAGCCAATGGAGATATAAAAGGAAGAAAGCCCTTTACGAACCAGAGAGATTTTTCT
AGTATGGGAGAAGTTTATCACTCTTCTTACAAGGGCCCTCCGTCTGAGGGAAGCTCAGAAACTT
CATCACAGTCAGAAGAGTCCTATTTTTGTGGCATTTCCGCTTGTACAAGTCTGTGCAATGGACA
GACCCAAAAGACAAAAACTGAGAAGAGGGCTTTAAAACGAAGGCGATCTAAAGTCCAAGACCAA
GGAAAGTTAATAAAAGCTCTTATACAGACTAAGTCGGGGTCATTGCCGAGCCTGCATGACATAA
TCAAAGGAAACAAGGAGATCACCGTGGGAGCATTTGGGGTTACAGCAGTCTCGGGACATATCTA
AAAGGAGCTGAACATTTATACTGAGGACTTTTTGTTGTTCTTTGAAGAACAGCCTGTGGTATTT
GAAGGGTTCAGGGGGAGGGATAAAATATTGGGGAAAGTATTCAGAAATTATGTTTTTTTTATTT
TGCCTTTTAAAAAAGTAGACAGGATTGCGTCAATCTTGCTGATGAACTGCAGTTTTACGAGGCT
GATCTCTTCCTATGAGGATGATGATAGACATTTTATAAAGATGTGTTTTCACAGAGAATTACTG
GGACAAAAGTAATTTGGAAGCCCAGTTCCTTGGGTGGATAGGAATGAAAGCCTAAACCTCTCCC
TTCAGCTTGGTTCCCGTTTCTTGCACCTTCCCATATTTATGTGCCTTTTGTCTATTTATAATGC
CACTGGAAGAGGAGGGAGAACTTTTTCTGTCAGTTGATTTGTTTTGTAACTTTATTAGGTTTTT
GAAGCTGCAACACTACAAAGCTTTAAGGTGGTCCATGCCAGAAGCCCAGCAACGTGGGTCATTT
GCATAAAGATCCTAAAGACTTCCAACTTAGAATCGCTCAGTAGTCTCACTGGAATAAACACTTG
CTGAAGTTTCTAACGGCCTTTCAGATAAAAGGTGATGAGTTCACCCTGGGTCTTATTTAATTTA
GTTGGATTGGGTTATGCTTTTTTCCCTGAGTTTTTAACTCAGTAAAATGGTAAGATATTTTCTT
GAAAATGACAGGTATTTGAAACAAATTTATTATAAATTCACCTTTAAACACACTTAAGTATTTG
TGATGATTTCTTTACATTGCATTCTAAATGTTCACAGTAAACACTAATCCTCCAAATTTTCACA
TCATCAAGACCATGTTTTCATGGTCCAGTCACTCACTGCCTTTGTACATAGTCACAGCCAGCCA
GTGAGCACGTCAGGCCTGATTCAGTCTAATTGGTGAAGTCTAGTAGGATTATGATTCCTTTGTG
TTTGCTTTTGTTGGCTACAATGTGCAGATATGTGTGTATGTGGTTGTCAGCGTTTGTCTTCATT
TACTTTTTGTCCCCCCACCCCCCCCCTTAAGTAATTGGCAGTGTCTGTCTGAGTAAATTGAGTT
CTTGATGTGTGGATTGTACAGGGATGAGTGAAAGTGAAATGTGTTTTTGAGAGAATTGACCATT
TTGTGTTGTAAAATTTAAGTTATAACTTATTGAGCACTTTTGTTAATAATTGTTTTTAAATTTG
TCTAATACCTTTTTTGGTGTTGTTTGTAATGTGATTTATTTAAGGCCTTTTTCTTTAAGTTGCT
GCTTTAGGTGAACAGTACGTTTTAGGAAATGAATTTTACCCCTTCCAGTCTGCACAATTAGCCA
TTCAGAGCAATAGGGCCTGATGGTACAGCAGGCCCTTGAAGTCCAGATGCCAGCAGAGCCAGAG
TGGGAAGTCACTATGTGTTGTGAAAAGAGGGTTTTAAATATGTAACTACAGAGCTGTAGTACCA
TTAGAAACTGTGAATTTCCAAATAAATCTGAACACTTGTCTTTATTAA

hide sequence

RefSeq Acc Id:

XM_017598851 ⟹ XP_017454340

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,726,095 - 76,790,796 (-)	NCBI
mRatBN7.2	13	74,192,808 - 74,257,519 (-)	NCBI
Rnor_6.0	13	79,736,485 - 79,801,133 (-)	NCBI

Sequence:

show sequence

AGGGGGAAGAAGGAGGAGAAGATGAAGAAGTACCGGCGGGCCTTGGCCCTGGTCTCCTGCCTCT
CTCTCTGCTCTCTAGTCTGGCTTCCAAGTTGGCATGTATGCTGTAAAGAGAGTTCTTCAGCTTC
AACATCATACTATTCTCAAGATGATAATTGTGCAGTAGGAAGTGAAGACATACAGTTCCAGAAA
AAGAATGAAAGAGAAGAACCTAGTAATGCTAAAGTATCAGAAAAATCAAATTCATATTTAACTA
TATCTCCAGAAGAAAATAAATTAAAAGATGACTACACTGTGGATGAACAAAATATGGAAACAGC
GAAGTTAAGTCTACCTGTGGTTGAAGCACTCCCTACAGTTGATTCGCATGAAGAGTCTTCCAGT
GTAGTTGTAGGCAGTGAAAACATCGAAAATAGTTCCAGTTCATCTACCTCAGAAACGACTCCAA
TCTCAAAGCTTGATGAAATAGAAAACTCTGGTACTTTATCTGTAGCCAAGCCAGGTGACACAGA
GCAGCCTGAAGCTGACTGTGATGCTGGGGAGGCTGCGGACGCAGATGCTTCCGTGGAGCAGCCT
GCTTTCGTCAGTGCACCGGAGAGCCTTGTTGGCCAACATATAGAGAACGTGTCGTCTTCACATG
GCAAAGAAAAAGTAACAAAATCAGAGTTTGAATCAAAAGTTTCAGTGAGTGAACAAGATGGCGG
TGATCCAAAGTCTGCATTGAATGCTTCAGATACTTTAAAAAATGAGAGCTCTGATTATACAAAA
CCACGAGAAACTGACCCTACATCTGTTACAAGTCCCAAAGACCCAGAAGATATACCCACATTTG
ATGAGTGGAAGAAGAAAGTTATGGAAGTAGAGAAAGAAAAAAGTCTGTCTACAGGTCAGTCGTT
GCACCCATCTTCTAATGGAGGTCCACATGCCACCAAAAAGGTCCAGAAAAATAGAAATAATTAT
GCCTCTGTAGAATGCGGTGCCAAAATTTTGGCAGCTAATCCGGAAGCCAAGAGCACATCTGCTA
TTCTTATAGAAAATATGGATCTTTATATGCTGAATCCTTGCAGCACTAAAATATGGTTTGTTAT
TGAGCTTTGTGAGCCAATTCAAGTGAAACAGTTTGATATTGCAAATTATGAATTATTTTCTTCT
ACTCCCAAAGACTTTCTGGTTTCTATCAGTGACAGATATCCCACAAATAAATGGATTAAGCTGG
GTACTTTCCATGGTAGAGATGAGCGGACTGTCCAAAGTTTCCCCCTGGATGAACAGATGTATGC
AAAATATGTGAAGATGTTCATCAAGTACATAAAGGTGGAGCTGTTGTCTCATTTTGGATCAGAG
CACTTCTGTCCTTTAAGCCTAATAAGGGTTTTCGGTACTAGTATGGTGGAAGAATATGAGGAAA
TTGCTGACTCCCAGTATCAATCAGAGCGTCAGGAACTATTTGATGAGGACTATGACTATCCCCT
GGATTATAATACTGTGGAGGATAAATCTTCAAAGAATCTTCTTGGTTCTGCTACAAATGCCATT
CTAAATATGGTGAATATTGCTGCTAATATTCTGGGAGCAAAAACTGAAGACTTGACAGAAGGAA
ATAAAAGTATATCTGAGAATGCCACTGCCACAACTGAACCTAAAATGCCTGAATCAACTGGTGT
TTCAACTCCTGTTCCATCGCCTGAATATATAATCAAGGAAGTCCATACACATGATACAGAACCA
CCAACCTCAGATCCTCCAAAGGAGAGTCCGATTGTACAGCTGGTTCAGGAGGAAGAGGAGGAAG
CAAGCCCATCTACAGTGACCCTTCTGGGCAGCGGCGAACAGGAGGATGAGTCCTCATCCTGGTT
TGAGTCTGAGACACAAATACTTTGTAGTGAACTGACTTCAATTTGTTGTATTTCTAGTTTTTCG
GAGTACTTATATAAATGGTGCTCAGTTAGAATCGCTCTTTATCGACAACACAGCAGAACTGTGA
GTAAAGGAAAAGATGTGTCACCTCAGCCATCGTTACTCCCTCCTGTAGACTCAGTAGAAGTTTC
AGTACTGCAGCCTCCCAGTGGAGATGTGGATAAGGAGGACATGGAAAGAGAATTGGAGACTGTG
GCTCTGGATGATTTAAGTAGTGTGCACCAGGCTCATGTGAGGAATCACACAGTGGATACAGTTG
AACTTGAACCAAGCTACCCTCAAACTCTTTCTCAGTCCCTTCCCTTAGACGTTACTCCAGAAAT
GGATTCACTGTCTACAGTAGAAGGATCTGAGTCTGTTAAATCTGAGGGAGGACATAAACCATCG
CAAGTCATGCCCCAAGAGAGTTCTGTCGAGTTTGATGACGAAACAGAAAAAAAGCCTGAGAGCT
TTAGTTCTGTTGCGAAGCTCTCTGTTATTTATGAAACAAGTAAAGTTAACGAGGTAATGGACGG
TACTGTGAAAGAAGACATAGTCTCCACACACGTGGTCACCAAGTTCCCTGAAACCAAGTTCCCT
GAAACAGTAGCACCACCCCCTATAAACACAGCCGCTGTGCCTGAGAGTGAAGGCATGGAAACCA
AACCTAGTTTAGCTGATACACTAAAGCACGTAGTGACGCCCGTTACAGATCCTTCATTGCCTGA
AGTGAAAGAGGATGAGCAGTCTCCAGACGATGCCCTTTTAAGAGGGTTACAGAGGACAGCTACA
GATTTCTATGCTGAACTACAAAATTCTACAGATCTGGGATATGGTAATGGAAACCTTGTACATG
GATCAAATCAGAAGGAGTCAGTATTTATGAGACTTAATAATCGTATTAAAGCCTTAGAAGTTAA
CATGTCTCTCAGTGGTCGTTATCTGGAGGAGCTTAGTCAAAGGTACCGAAAACAAATGGAAGAA
ATGCAAAAGGCTTTCAATAAAACAATAGTTAAGCTTCAGAATACTTCACGGATAGCAGAAGAGC
AGGATCAGCGGCAAACTGAAGCCATCCACTTGCTGCAGGCACAACTGACCAACATGACACAGAT
TGTTTCAAACTTGTCAGCAACTGTAGCAGAATTAAAACGGGAGGTTTCAGATCGTCAGAGTTAC
CTTGTCATGTCTTTGGTTCTATGTGTGGTCTTGGGACTGATGCTCTGTATGCAACGTTGTCGAA
ATACTTCTCAATTTGATGGAGATTACACTTCAAAACTTCCTAAAAGTAATCAGTACCCAAGCCC
TAAAAGGTGTTTTTCCTCCTATGATGACATGAATTTGAAAAGAAGAACCTCATTTCCCCTCATC
AGATCCAAGTCTTTGCAGTTTACTGGCAAAGAAGACCCGAATGATTTGTACATCGTAGAACCCC
TCAAGTTCTCTCCAGAGAAAAAGAAGAAACGTTGCAAGTACAAAACTGAAAAAATTGAGACAAT
AAAGCCTGCAGATCCATTGCACCCTATAGCCAATGGAGATATAAAAGGAAGAAAGCCCTTTACG
AACCAGAGAGATTTTTCTAGTATGGGAGAAGTTTATCACTCTTCTTACAAGGGCCCTCCGTCTG
AGGGAAGCTCAGAAACTTCATCACAGTCAGAAGAGTCCTATTTTTGTGGCATTTCCGCTTGTAC
AAGTCTGTGCAATGGACAGACCCAAAAGACAAAAACTGAGAAGAGGGCTTTAAAACGAAGGCGA
TCTAAAGTCCAAGACCAAGGAAAGTTAATAAAAGCTCTTATACAGACTAAGTCGGGGTCATTGC
CGAGCCTGCATGACATAATCAAAGGAAACAAGGAGATCACCGTGGGAGCATTTGGGGTTACAGC
AGTCTCGGGACATATCTAAAAGGAGCTGAACATTTATACTGAGGACTTTTTGTTGTTCTTTGAA
GAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATATTGGGGAAAGTATTCAGAA
ATTATGTTTTTTTTATTTTGCCTTTTAAAAAAGTAGACAGGATTGCGTCAATCTTGCTGATGAA
CTGCAGTTTTACGAGGCTGATCTCTTCCTATGAGGATGATGATAGACATTTTATAAAGATGTGT
TTTCACAGAGAATTACTGGGACAAAAGTAATTTGGAAGCCCAGTTCCTTGGGTGGATAGGAATG
AAAGCCTAAACCTCTCCCTTCAGCTTGGTTCCCGTTTCTTGCACCTTCCCATATTTATGTGCCT
TTTGTCTATTTATAATGCCACTGGAAGAGGAGGGAGAACTTTTTCTGTCAGTTGATTTGTTTTG
TAACTTTATTAGGTTTTTGAAGCTGCAACACTACAAAGCTTTAAGGTGGTCCATGCCAGAAGCC
CAGCAACGTGGGTCATTTGCATAAAGATCCTAAAGACTTCCAACTTAGAATCGCTCAGTAGTCT
CACTGGAATAAACACTTGCTGAAGTTTCTAACGGCCTTTCAGATAAAAGGTGATGAGTTCACCC
TGGGTCTTATTTAATTTAGTTGGATTGGGTTATGCTTTTTTCCCTGAGTTTTTAACTCAGTAAA
ATGGTAAGATATTTTCTTGAAAATGACAGGTATTTGAAACAAATTTATTATAAATTCACCTTTA
AACACACTTAAGTATTTGTGATGATTTCTTTACATTGCATTCTAAATGTTCACAGTAAACACTA
ATCCTCCAAATTTTCACATCATCAAGACCATGTTTTCATGGTCCAGTCACTCACTGCCTTTGTA
CATAGTCACAGCCAGCCAGTGAGCACGTCAGGCCTGATTCAGTCTAATTGGTGAAGTCTAGTAG
GATTATGATTCCTTTGTGTTTGCTTTTGTTGGCTACAATGTGCAGATATGTGTGTATGTGGTTG
TCAGCGTTTGTCTTCATTTACTTTTTGTCCCCCCACCCCCCCCCTTAAGTAATTGGCAGTGTCT
GTCTGAGTAAATTGAGTTCTTGATGTGTGGATTGTACAGGGATGAGTGAAAGTGAAATGTGTTT
TTGAGAGAATTGACCATTTTGTGTTGTAAAATTTAAGTTATAACTTATTGAGCACTTTTGTTAA
TAATTGTTTTTAAATTTGTCTAATACCTTTTTTGGTGTTGTTTGTAATGTGATTTATTTAAGGC
CTTTTTCTTTAAGTTGCTGCTTTAGGTGAACAGTACGTTTTAGGAAATGAATTTTACCCCTTCC
AGTCTGCACAATTAGCCATTCAGAGCAATAGGGCCTGATGGTACAGCAGGCCCTTGAAGTCCAG
ATGCCAGCAGAGCCAGAGTGGGAAGTCACTATGTGTTGTGAAAAGAGGGTTTTAAATATGTAAC
TACAGAGCTGTAGTACCATTAGAAACTGTGAATTTCCAAATAAATCTGAACACTTGTCTTTATT
AA

hide sequence

RefSeq Acc Id:

XM_039090908 ⟹ XP_038946836

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,726,095 - 76,790,793 (-)	NCBI
mRatBN7.2	13	74,192,808 - 74,257,517 (-)	NCBI

RefSeq Acc Id:

XM_063272485 ⟹ XP_063128555

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,726,095 - 76,790,796 (-)	NCBI

RefSeq Acc Id:

XR_001840781

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,729,744 - 76,790,796 (-)	NCBI
mRatBN7.2	13	74,196,460 - 74,257,519 (-)	NCBI
Rnor_6.0	13	79,740,134 - 79,801,133 (-)	NCBI

Sequence:

show sequence

AGGGGGAAGAAGGAGGAGAAGATGAAGAAGTACCGGCGGGCCTTGGCCCTGGTCTCCTGCCTCT
CTCTCTGCTCTCTAGTCTGGCTTCCAAGTTGGCATGTATGCTGTAAAGAGAGTTCTTCAGCTTC
AACATCATACTATTCTCAAGATGATAATTGTGCAGTAGGAAGTGAAGACATACAGTTCCAGAAA
AAGAATGAAAGAGAAGAACCTAGTAATGCTAAAGTATCAGAAAAATCAAATTCATATTTAACTA
TATCTCCAGAAGAAAATAAATTAAAAGATGACTACACTGTGGATGAACAAAATATGGAAACAGC
GAAGTTAAGTCTACCTGTGGTTGAAGCACTCCCTACAGTTGATTCGCATGAAGAGTCTTCCAGT
GTAGTTGTAGGCAGTGAAAACATCGAAAATAGTTCCAGTTCATCTACCTCAGAAACGACTCCAA
TCTCAAAGCTTGATGAAATAGAAAACTCTGGTACTTTATCTGTAGCCAAGCCAGGTGACACAGA
GCAGCCTGAAGCTGACTGTGATGCTGGGGAGGCTGCGGACGCAGATGCTTCCGTGGAGCAGCCT
GCTTTCGTCAGTGCACCGGAGAGCCTTGTTGGCCAACATATAGAGAACGTGTCGTCTTCACATG
GCAAAGAAAAAGTAACAAAATCAGAGTTTGAATCAAAAGTTTCAGTGAGTGAACAAGATGGCGG
TGATCCAAAGTCTGCATTGAATGCTTCAGATACTTTAAAAAATGAGAGCTCTGATTATACAAAA
CCACGAGAAACTGACCCTACATCTGTTACAAGTCCCAAAGACCCAGAAGATATACCCACATTTG
ATGAGTGGAAGAAGAAAGTTATGGAAGTAGAGAAAGAAAAAAGTCTGTCTACAGGTCAGTCGTT
GCACCCATCTTCTAATGGAGGTCCACATGCCACCAAAAAGGTCCAGAAAAATAGAAATAATTAT
GCCTCTGTAGAATGCGGTGCCAAAATTTTGGCAGCTAATCCGGAAGCCAAGAGCACATCTGCTA
TTCTTATAGAAAATATGGATCTTTATATGCTGAATCCTTGCAGCACTAAAATATGGTTTGTTAT
TGAGCTTTGTGAGCCAATTCAAGTGAAACAGTTTGATATTGCAAATTATGAATTATTTTCTTCT
ACTCCCAAAGACTTTCTGGTTTCTATCAGTGACAGATATCCCACAAATAAATGGATTAAGCTGG
GTACTTTCCATGGTAGAGATGAGCGGACTGTCCAAAGTTTCCCCCTGGATGAACAGATGTATGC
AAAATATGTGAAGATGTTCATCAAGTACATAAAGGTGGAGCTGTTGTCTCATTTTGGATCAGAG
CACTTCTGTCCTTTAAGCCTAATAAGGGTTTTCGGTACTAGTATGGTGGAAGAATATGAGGAAA
TTGCTGACTCCCAGTATCAATCAGAGCGTCAGGAACTATTTGATGAGGACTATGACTATCCCCT
GGATTATAATACTGTGGAGGATAAATCTTCAAAGAATCTTCTTGGTTCTGCTACAAATGCCATT
CTAAATATGGTGAATATTGCTGCTAATATTCTGGGAGCAAAAACTGAAGACTTGACAGAAGGAA
ATAAAAGTATATCTGAGAATGCCACTGCCACAACTGAACCTAAAATGCCTGAATCAACTGGTGT
TTCAACTCCTGTTCCATCGCCTGAATATATAATCAAGGAAGTCCATACACATGATACAGAACCA
CCAACCTCAGATCCTCCAAAGGAGAGTCCGATTGTACAGCTGGTTCAGGAGGAAGAGGAGGAAG
CAAGCCCATCTACAGTGACCCTTCTGGGCAGCGGCGAACAGGAGGATGAGTCCTCATCCTGGTT
TGAGTCTGAGACACAAATACTTTGTAGTGAACTGACTTCAATTTGTTGTATTTCTAGTTTTTCG
GAGTACTTATATAAATGGTGCTCAGTTAGAATCGCTCTTTATCGACAACACAGCAGAACTGTGA
GTAAAGGAAAAGATGTGTCACCTCAGCCATCGTTACTCCCTCCTGTAGACTCAGTAGAAGTTTC
AGTACTGCAGCCTCCCAGTGGAGATGTGGATAAGGAGGACATGGAAAGAGAATTGGAGACTGTG
GCTCTGGATGATTTAAGTAGTGTGCACCAGGCTCATGTGAGGAATCACACAGTGGATACAGTTG
AACTTGAACCAAGCTACCCTCAAACTCTTTCTCAGTCCCTTCCCTTAGACGTTACTCCAGAAAT
GGATTCACTGTCTACAGTAGAAGGATCTGAGTCTGTTAAATCTGAGGGAGGACATAAACCATCG
CAAGTCATGCCCCAAGAGAGTTCTGTCGAGTTTGATGACGAAACAGAAAAAAAGCCTGAGAGCT
TTAGTTCTGTTGCGAAGCTCTCTGTTATTTATGAAACAAGTAAAGTTAACGAGGTAATGGACGG
TACTGTGAAAGAAGACATAGTCTCCACACACGTGGTCACCAAGTTCCCTGAAACCAAGTTCCCT
GAAACAGTAGCACCACCCCCTATAAACACAGCCGCTGTGCCTGAGAGTGAAGGCATGGAAACCA
AACCTAGTTTAGCTGATACACTAAAGCACGTAGTGACGCCCGTTACAGATCCTTCATTGCCTGA
AGTGAAAGAGGATGAGCAGTCTCCAGACGATGCCCTTTTAAGAGGGTTACAGAGGACAGCTACA
GATTTCTATGCTGAACTACAAAATTCTACAGATCTGGGATATGGTAATGGAAACCTTGTACATG
GATCAAATCAGAAGGAGTCAGTATTTATGAGACTTAATAATCGTATTAAAGCCTTAGAAGTTAA
CATGTCTCTCAGTGGTCGTTATCTGGAGGAGCTTAGTCAAAGGTACCGAAAACAAATGGAAGAA
ATGCAAAAGGCTTTCAATAAAACAATAGTTAAGCTTCAGAATACTTCACGGATAGCAGAAGAGC
AGGATCAGCGGCAAACTGAAGCCATCCACTTGCTGCAGGCACAACTGACCAACATGACACAGAT
TGTTTCAAACTTGTCAGCAACTGTAGCAGAATTAAAACGGGAGGTTTCAGATCGTCAGAGTTAC
CTTGTCATGTCTTTGGTTCTATGTGTGGTCTTGGGACTGATGCTCTGTATGCAACGTTGTCGAA
ATACTTCTCAATTTGATGGAGATTACACTTCAAAACTTCCTAAAAGTAATCAGTACCCAAGCCC
TAAAAGGTGTTTTTCCTCCTATGATGACATGAATTTGAAAAGAAGAACCTCATTTCCCCTCATC
AGATCCAAGTCTTTGCAGTTTACTGGCAAAGAAGAAAGGGATGTTTGAGAAAGTTCAACAGCTA
TGGAAAACCTGAATGCTCAATGTGCTCTCATAGCATCCTGTGCTTTTCTGCCTCCTCTTCTTGT
GCAGTAGACCCGAATGATTTGTACATCGTAGAACCCCTCAAGTTCTCTCCAGAGAAAAAG

hide sequence

RefSeq Acc Id:

XR_010056923

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,727,925 - 76,790,796 (-)	NCBI

RefSeq Acc Id:

XR_010056924

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,727,925 - 76,790,796 (-)	NCBI

RefSeq Acc Id:

XR_010056925

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	76,729,744 - 76,790,796 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_955435	(Get FASTA)	NCBI Sequence Viewer
	XP_006250226	(Get FASTA)	NCBI Sequence Viewer
	XP_006250228	(Get FASTA)	NCBI Sequence Viewer
	XP_008767879	(Get FASTA)	NCBI Sequence Viewer
	XP_008767880	(Get FASTA)	NCBI Sequence Viewer
	XP_017454340	(Get FASTA)	NCBI Sequence Viewer
	XP_038946836	(Get FASTA)	NCBI Sequence Viewer
	XP_063128555	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	CAD13342	(Get FASTA)	NCBI Sequence Viewer
	CBX85930	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000068027
	ENSRNOP00000071346
GenBank Protein	Q710E6	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_955435 ⟸ NM_199403
- Peptide Label:	precursor
- UniProtKB:	A0A096MJ80 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKYRRALALVSCLSLCSLVWLPSWHVCCKESSSASTSYYSQDDNCAVGSEDIQFQKKNEREEP SNAKVSEKSNSYLTISPEENKLKDDYTVDECKIWKQSKLSLPVVEALPTVDSHEESSSVVVGSE NIENSSSSSTSETSPISKLDEIENSGTLSVAKPGDTEQPEADCDAGEAADADASVEQPAFVSAP ESLVGQHIENVSSSHGKEKVTKSEFESKVSVSEQDGGDPKSALNASDTLKNESSDYTKPRETDP TSVTSPKDPEDIPTFDEWKKKVMEVEKEKSQSLHPSSNGGPHATKKVQKNRNNYASVECGAKIL AANPEAKSTSAILIENMDLYMLNPCSTKIWFVIELCEPIQVKQFDIANYELFSSTPKDFLVSIS DRYPTNKWIKLGTFHGRDERTVQSFPLDEQMYAKYVKMFIKYIKVELLSHFGSEHFCPLSLIRV FGTSMVEEYEEIADSQYQSERQELFDEDYDYPLDYNTVEDKSSKNLLGSATNAILNMVNIAANI LGAKTEDLTEGDKSISENATATTEPKMPESTGVSTPVPSPEYIIKEVHTHDTEPPTSDPPKESP IVQLVQEEEEEASPSTVTLLGSGEQEDESSSWFESETQILCSELTSICCISSFSEYLYKWCSVR IALYRQHSRTVSKGKDVSPQPSLLPPVDSVEVSVLQPPSGNVDKEDMERELETVALDDLSSVHQ AHVRNHTVDTVELEPSYPQTLSQSLPLDVTPEMDSLSTVEGSESVKSEGGHKPSQVMPQESSVE FDDETEKKPESFSSVAKLSVIYETSKVNEVMDGPVKEDIVSTHVVTKFPETKFPETVAPPPINT AAVPESEGMETKPSLADTLKHVVTPVTDPSLPEVKEDEQSPDDALLRGLQRTATDFYAELQNST DLGYGNGNLVHGSNQKESVFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIV KLQNTSRIAEEQDQRQTEAIHLLQAQLTNMTQIVSNLSATVAELKREVSDRQSYLVMSLVLCVV LGLMLCMQRCRNTSQFDGDYTSKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLIRSKSLQFTGK EDPNDLYIVEPLKFSPEKKKKRCKYKTEKIETIKPADPLHPIANGDIKGRKPFTNQRDFSSMGE VYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQTQKTKLRRGLKRRRSKVQDQGKLIK ALIQTKSGSLPSLHDIIKGNKEITVGAFGVTAVSGHI hide sequence

RefSeq Acc Id:	XP_006250228 ⟸ XM_006250166
- Peptide Label:	isoform X5
- UniProtKB:	A0A096MJ80 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKYRRALALVSCLSLCSLVWLPSWHVCCKESSSASTSYYSQDDNCAVGSEDIQFQKKNEREEP SNAKVSEKSNSYLTISPEENKLKDDYTVDEQNMETAKLSLPVVEALPTVDSHEESSSVVVGSEN IENSSSSSTSETTPISKLDEIENSGTLSVAKPGDTEQPEADCDAGEAADADASVEQPAFVSAPE SLVGQHIENVSSSHGKEKVTKSEFESKVSVSEQDGGDPKSALNASDTLKNESSDYTKPRETDPT SVTSPKDPEDIPTFDEWKKKVMEVEKEKSQSLHPSSNGGPHATKKVQKNRNNYASVECGAKILA ANPEAKSTSAILIENMDLYMLNPCSTKIWFVIELCEPIQVKQFDIANYELFSSTPKDFLVSISD RYPTNKWIKLGTFHGRDERTVQSFPLDEQMYAKYVKVELLSHFGSEHFCPLSLIRVFGTSMVEE YEEIADSQYQSERQELFDEDYDYPLDYNTVEDKSSKNLLGSATNAILNMVNIAANILGAKTEDL TEGNKSISENATATTEPKMPESTGVSTPVPSPEYIIKEVHTHDTEPPTSDPPKESPIVQLVQEE EEEASPSTVTLLGSGEQEDESSSWFESETQILCSELTSICCISSFSEYLYKWCSVRIALYRQHS RTVSKGKDVSPQPSLLPPVDSVEVSVLQPPSGDVDKEDMERELETVALDDLSSVHQAHVRNHTV DTVELEPSYPQTLSQSLPLDVTPEMDSLSTVEGSESVKSEGGHKPSQVMPQESSVEFDDETEKK PESFSSVAKLSVIYETSKVNEVMDGTVKEDIVSTHVVTKFPETKFPETVAPPPINTAAVPESEG METKPSLADTLKHVVTPVTDPSLPEVKEDEQSPDDALLRGLQRTATDFYAELQNSTDLGYGNGN LVHGSNQKESVFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVKLQNTSRI AEEQDQRQTEAIHLLQAQLTNMTQIVSNLSATVAELKREVSDRQSYLVMSLVLCVVLGLMLCMQ RCRNTSQFDGDYTSKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLIRSKSLQFTGKEVDPNDLY IVEPLKFSPEKKKKRCKYKTEKIETIKPADPLHPIANGDIKGRKPFTNQRDFSSMGEVYHSSYK GPPSEGSSETSSQSEESYFCGISACTSLCNGQTQKTKTEKRALKRRRSKVQDQGKLIKALIQTK SGSLPSLHDIIKGNKEITVGAFGVTAVSGHI hide sequence

RefSeq Acc Id:	XP_006250226 ⟸ XM_006250164
- Peptide Label:	isoform X3
- UniProtKB:	A0A096MJ80 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKYRRALALVSCLSLCSLVWLPSWHVCCKESSSASTSYYSQDDNCAVGSEDIQFQKKNEREEP SNAKVSEKSNSYLTISPEENKLKDDYTVDEQNMETAKLSLPVVEALPTVDSHEESSSVVVGSEN IENSSSSSTSETTPISKLDEIENSGTLSVAKPGDTEQPEADCDAGEAADADASVEQPAFVSAPE SLVGQHIENVSSSHGKEKVTKSEFESKVSVSEQDGGDPKSALNASDTLKNESSDYTKPRETDPT SVTSPKDPEDIPTFDEWKKKVMEVEKEKSQSLHPSSNGGPHATKKVQKNRNNYASVECGAKILA ANPEAKSTSAILIENMDLYMLNPCSTKIWFVIELCEPIQVKQFDIANYELFSSTPKDFLVSISD RYPTNKWIKLGTFHGRDERTVQSFPLDEQMYAKYVKMFIKYIKVELLSHFGSEHFCPLSLIRVF GTSMVEEYEEIADSQYQSERQELFDEDYDYPLDYNTVEDKSSKNLLGSATNAILNMVNIAANIL GAKTEDLTEGNKSISENATATTEPKMPESTGVSTPVPSPEYIIKEVHTHDTEPPTSDPPKESPI VQLVQEEEEEASPSTVTLLGSGEQEDESSSWFESETQILCSELTSICCISSFSEYLYKWCSVRI ALYRQHSRTVSKGKDVSPQPSLLPPVDSVEVSVLQPPSGDVDKEDMERELETVALDDLSSVHQA HVRNHTVDTVELEPSYPQTLSQSLPLDVTPEMDSLSTVEGSESVKSEGGHKPSQVMPQESSVEF DDETEKKPESFSSVAKLSVIYETSKVNEVMDGTVKEDIVSTHVVTKFPETKFPETVAPPPINTA AVPESEGMETKPSLADTLKHVVTPVTDPSLPEVKEDEQSPDDALLRGLQRTATDFYAELQNSTD LGYGNGNLVHGSNQKESVFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVK LQNTSRIAEEQDQRQTEAIHLLQAQLTNMTQIVSNLSATVAELKREVSDRQSYLVMSLVLCVVL GLMLCMQRCRNTSQFDGDYTSKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLIRSKSLQFTGKE VDPNDLYIVEPLKFSPEKKKKRCKYKTEKIETIKPADPLHPIANGDIKGRKPFTNQRDFSSMGE VYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQTQKTKTEKRALKRRRSKVQDQGKLI KALIQTKSGSLPSLHDIIKGNKEITVGAFGVTAVSGHI hide sequence

RefSeq Acc Id:	XP_008767880 ⟸ XM_008769658
- Peptide Label:	isoform X4
- UniProtKB:	A0A096MJ80 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKYRRALALVSCLSLCSLVWLPSWHVCCKESSSASTSYYSQDDNCAVGSEDIQFQKKNEREEP SNAKVSEKSNSYLTISPEENKLKDDYTVDEQNMETAKLSLPVVEALPTVDSHEESSSVVVGSEN IENSSSSSTSETTPISKLDEIENSGTLSVAKPGDTEQPEADCDAGEAADADASVEQPAFVSAPE SLVGQHIENVSSSHGKEKVTKSEFESKVSVSEQDGGDPKSALNASDTLKNESSDYTKPRETDPT SVTSPKDPEDIPTFDEWKKKVMEVEKEKSLSTGQSLHPSSNGGPHATKKVQKNRNNYASVECGA KILAANPEAKSTSAILIENMDLYMLNPCSTKIWFVIELCEPIQVKQFDIANYELFSSTPKDFLV SISDRYPTNKWIKLGTFHGRDERTVQSFPLDEQMYAKYVKVELLSHFGSEHFCPLSLIRVFGTS MVEEYEEIADSQYQSERQELFDEDYDYPLDYNTVEDKSSKNLLGSATNAILNMVNIAANILGAK TEDLTEGNKSISENATATTEPKMPESTGVSTPVPSPEYIIKEVHTHDTEPPTSDPPKESPIVQL VQEEEEEASPSTVTLLGSGEQEDESSSWFESETQILCSELTSICCISSFSEYLYKWCSVRIALY RQHSRTVSKGKDVSPQPSLLPPVDSVEVSVLQPPSGDVDKEDMERELETVALDDLSSVHQAHVR NHTVDTVELEPSYPQTLSQSLPLDVTPEMDSLSTVEGSESVKSEGGHKPSQVMPQESSVEFDDE TEKKPESFSSVAKLSVIYETSKVNEVMDGTVKEDIVSTHVVTKFPETKFPETVAPPPINTAAVP ESEGMETKPSLADTLKHVVTPVTDPSLPEVKEDEQSPDDALLRGLQRTATDFYAELQNSTDLGY GNGNLVHGSNQKESVFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVKLQN TSRIAEEQDQRQTEAIHLLQAQLTNMTQIVSNLSATVAELKREVSDRQSYLVMSLVLCVVLGLM LCMQRCRNTSQFDGDYTSKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLIRSKSLQFTGKEVDP NDLYIVEPLKFSPEKKKKRCKYKTEKIETIKPADPLHPIANGDIKGRKPFTNQRDFSSMGEVYH SSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQTQKTKTEKRALKRRRSKVQDQGKLIKAL IQTKSGSLPSLHDIIKGNKEITVGAFGVTAVSGHI hide sequence

RefSeq Acc Id:	XP_008767879 ⟸ XM_008769657
- Peptide Label:	isoform X1
- UniProtKB:	A0A096MJ80 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKYRRALALVSCLSLCSLVWLPSWHVCCKESSSASTSYYSQDDNCAVGSEDIQFQKKNEREEP SNAKVSEKSNSYLTISPEENKLKDDYTVDEQNMETAKLSLPVVEALPTVDSHEESSSVVVGSEN IENSSSSSTSETTPISKLDEIENSGTLSVAKPGDTEQPEADCDAGEAADADASVEQPAFVSAPE SLVGQHIENVSSSHGKEKVTKSEFESKVSVSEQDGGDPKSALNASDTLKNESSDYTKPRETDPT SVTSPKDPEDIPTFDEWKKKVMEVEKEKSLSTGQSLHPSSNGGPHATKKVQKNRNNYASVECGA KILAANPEAKSTSAILIENMDLYMLNPCSTKIWFVIELCEPIQVKQFDIANYELFSSTPKDFLV SISDRYPTNKWIKLGTFHGRDERTVQSFPLDEQMYAKYVKMFIKYIKVELLSHFGSEHFCPLSL IRVFGTSMVEEYEEIADSQYQSERQELFDEDYDYPLDYNTVEDKSSKNLLGSATNAILNMVNIA ANILGAKTEDLTEGNKSISENATATTEPKMPESTGVSTPVPSPEYIIKEVHTHDTEPPTSDPPK ESPIVQLVQEEEEEASPSTVTLLGSGEQEDESSSWFESETQILCSELTSICCISSFSEYLYKWC SVRIALYRQHSRTVSKGKDVSPQPSLLPPVDSVEVSVLQPPSGDVDKEDMERELETVALDDLSS VHQAHVRNHTVDTVELEPSYPQTLSQSLPLDVTPEMDSLSTVEGSESVKSEGGHKPSQVMPQES SVEFDDETEKKPESFSSVAKLSVIYETSKVNEVMDGTVKEDIVSTHVVTKFPETKFPETVAPPP INTAAVPESEGMETKPSLADTLKHVVTPVTDPSLPEVKEDEQSPDDALLRGLQRTATDFYAELQ NSTDLGYGNGNLVHGSNQKESVFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNK TIVKLQNTSRIAEEQDQRQTEAIHLLQAQLTNMTQIVSNLSATVAELKREVSDRQSYLVMSLVL CVVLGLMLCMQRCRNTSQFDGDYTSKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLIRSKSLQF TGKEVDPNDLYIVEPLKFSPEKKKKRCKYKTEKIETIKPADPLHPIANGDIKGRKPFTNQRDFS SMGEVYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQTQKTKTEKRALKRRRSKVQDQ GKLIKALIQTKSGSLPSLHDIIKGNKEITVGAFGVTAVSGHI hide sequence

RefSeq Acc Id:	XP_017454340 ⟸ XM_017598851
- Peptide Label:	isoform X2
- UniProtKB:	A0A096MJ80 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKYRRALALVSCLSLCSLVWLPSWHVCCKESSSASTSYYSQDDNCAVGSEDIQFQKKNEREEP SNAKVSEKSNSYLTISPEENKLKDDYTVDEQNMETAKLSLPVVEALPTVDSHEESSSVVVGSEN IENSSSSSTSETTPISKLDEIENSGTLSVAKPGDTEQPEADCDAGEAADADASVEQPAFVSAPE SLVGQHIENVSSSHGKEKVTKSEFESKVSVSEQDGGDPKSALNASDTLKNESSDYTKPRETDPT SVTSPKDPEDIPTFDEWKKKVMEVEKEKSLSTGQSLHPSSNGGPHATKKVQKNRNNYASVECGA KILAANPEAKSTSAILIENMDLYMLNPCSTKIWFVIELCEPIQVKQFDIANYELFSSTPKDFLV SISDRYPTNKWIKLGTFHGRDERTVQSFPLDEQMYAKYVKMFIKYIKVELLSHFGSEHFCPLSL IRVFGTSMVEEYEEIADSQYQSERQELFDEDYDYPLDYNTVEDKSSKNLLGSATNAILNMVNIA ANILGAKTEDLTEGNKSISENATATTEPKMPESTGVSTPVPSPEYIIKEVHTHDTEPPTSDPPK ESPIVQLVQEEEEEASPSTVTLLGSGEQEDESSSWFESETQILCSELTSICCISSFSEYLYKWC SVRIALYRQHSRTVSKGKDVSPQPSLLPPVDSVEVSVLQPPSGDVDKEDMERELETVALDDLSS VHQAHVRNHTVDTVELEPSYPQTLSQSLPLDVTPEMDSLSTVEGSESVKSEGGHKPSQVMPQES SVEFDDETEKKPESFSSVAKLSVIYETSKVNEVMDGTVKEDIVSTHVVTKFPETKFPETVAPPP INTAAVPESEGMETKPSLADTLKHVVTPVTDPSLPEVKEDEQSPDDALLRGLQRTATDFYAELQ NSTDLGYGNGNLVHGSNQKESVFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNK TIVKLQNTSRIAEEQDQRQTEAIHLLQAQLTNMTQIVSNLSATVAELKREVSDRQSYLVMSLVL CVVLGLMLCMQRCRNTSQFDGDYTSKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLIRSKSLQF TGKEDPNDLYIVEPLKFSPEKKKKRCKYKTEKIETIKPADPLHPIANGDIKGRKPFTNQRDFSS MGEVYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQTQKTKTEKRALKRRRSKVQDQG KLIKALIQTKSGSLPSLHDIIKGNKEITVGAFGVTAVSGHI hide sequence

Ensembl Acc Id:

ENSRNOP00000067901 ⟸ ENSRNOT00000075998

Ensembl Acc Id:

ENSRNOP00000068027 ⟸ ENSRNOT00000075936

Ensembl Acc Id:

ENSRNOP00000033216 ⟸ ENSRNOT00000036483

Ensembl Acc Id:

ENSRNOP00000075385 ⟸ ENSRNOT00000087323

Ensembl Acc Id:

ENSRNOP00000071346 ⟸ ENSRNOT00000084058

Ensembl Acc Id:

ENSRNOP00000067896 ⟸ ENSRNOT00000076706

RefSeq Acc Id:	XP_038946836 ⟸ XM_039090908
- Peptide Label:	isoform X7
- UniProtKB:	A0A096MJ80 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128555 ⟸ XM_063272485
- Peptide Label:	isoform X6
- UniProtKB:	A0A096MJ80 (UniProtKB/TrEMBL)

Protein Domains

SUN

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q710E6-F1-model_v2	AlphaFold	Q710E6	1-1253	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698939

Promoter ID:

EPDNEW_R9459

Type:

initiation region

Name:

Suco_1

Description:

SUN domain containing ossification factor

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R9460

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	13	79,801,409 - 79,801,469	EPDNEW

RGD ID:

13698935

Promoter ID:

EPDNEW_R9460

Type:

single initiation site

Name:

Suco_2

Description:

SUN domain containing ossification factor

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R9459

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	13	79,801,592 - 79,801,652	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:735185	AgrOrtholog
BioCyc Gene	G2FUF-17701	BioCyc
Ensembl Genes	ENSRNOG00000026542	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000075936	ENTREZGENE
	ENSRNOT00000084058	ENTREZGENE
Gene3D-CATH	Galactose-binding domain-like	UniProtKB/Swiss-Prot
InterPro	Galactose-bd-like_sf	UniProtKB/Swiss-Prot
	Suco/Slp1-like	UniProtKB/Swiss-Prot
	SUN_dom	UniProtKB/Swiss-Prot
KEGG Report	rno:360863	UniProtKB/Swiss-Prot
NCBI Gene	360863	ENTREZGENE
PANTHER	PTHR12953	UniProtKB/Swiss-Prot
	SUN DOMAIN-CONTAINING OSSIFICATION FACTOR	UniProtKB/Swiss-Prot
Pfam	Sad1_UNC	UniProtKB/Swiss-Prot
PhenoGen	Suco	PhenoGen
PROSITE	SUN	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000026542	RatGTEx
Superfamily-SCOP	SSF49785	UniProtKB/Swiss-Prot
UniProt	A0A096MIW3_RAT	UniProtKB/TrEMBL
	A0A096MJ80	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K087_RAT	UniProtKB/TrEMBL
	Q710E6	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-07-18	Suco	SUN domain containing ossification factor	Dd25	hypothetical protein Dd25	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-07-18	Suco	SUN domain containing ossification factor	Suco	SUN domain containing ossification factor	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-08	Dd25	hypothetical protein Dd25	dd25	hypothetical protein	Symbol and Name updated	1299863	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - MGI