Smagp (small cell adhesion glycoprotein) - Rat Genome Database

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Gene: Smagp (small cell adhesion glycoprotein) Rattus norvegicus
Analyze
Symbol: Smagp
Name: small cell adhesion glycoprotein
RGD ID: 727777
Description: Predicted to be located in cytoplasmic vesicle membrane and plasma membrane. Orthologous to human SMAGP (small cell adhesion glycoprotein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: MGC124543; small cell transmembrane and glycosylated protein; small trans-membrane and glycosylated protein; small transmembrane and glycosylated protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87133,599,043 - 133,617,492 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7133,599,043 - 133,616,642 (-)EnsemblGRCr8
mRatBN7.27131,720,260 - 131,738,711 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7131,718,740 - 131,738,691 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7133,522,235 - 133,539,611 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07135,747,818 - 135,765,194 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07135,661,479 - 135,678,839 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07142,244,295 - 142,260,896 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7142,244,295 - 142,260,896 (-)Ensemblrn6Rnor6.0
Rnor_5.07140,048,950 - 140,066,042 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47139,367,386 - 139,403,817 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7128,195,494 - 128,213,797 (-)NCBICelera
RGSC_v3.17139,443,822 - 139,480,254 (-)NCBI
Cytogenetic Map7q36NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
2-palmitoylglycerol  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
all-trans-retinoic acid  (ISO)
amitriptyline  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
Benoxacor  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
copper(II) chloride  (ISO)
cyclosporin A  (ISO)
dibenz[a,h]anthracene  (ISO)
dorsomorphin  (ISO)
entinostat  (ISO)
finasteride  (EXP)
flutamide  (EXP)
genistein  (ISO)
gentamycin  (EXP)
glafenine  (EXP)
glyphosate  (EXP)
inulin  (ISO)
lipopolysaccharide  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
metformin  (EXP)
methylisothiazolinone  (ISO)
nefazodone  (EXP)
nitrates  (ISO)
nitrofen  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
rotenone  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
sunitinib  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
titanium dioxide  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. NCBI rat LocusLink and RefSeq merged data October 15, 2003 NCBI rat LocusLink and RefSeq merged data October 15, 2003
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15021913   PMID:15986429  


Genomics

Comparative Map Data
Smagp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87133,599,043 - 133,617,492 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7133,599,043 - 133,616,642 (-)EnsemblGRCr8
mRatBN7.27131,720,260 - 131,738,711 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7131,718,740 - 131,738,691 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7133,522,235 - 133,539,611 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07135,747,818 - 135,765,194 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07135,661,479 - 135,678,839 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07142,244,295 - 142,260,896 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7142,244,295 - 142,260,896 (-)Ensemblrn6Rnor6.0
Rnor_5.07140,048,950 - 140,066,042 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47139,367,386 - 139,403,817 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7128,195,494 - 128,213,797 (-)NCBICelera
RGSC_v3.17139,443,822 - 139,480,254 (-)NCBI
Cytogenetic Map7q36NCBI
SMAGP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381251,244,558 - 51,270,415 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1251,244,558 - 51,270,415 (-)Ensemblhg38GRCh38
GRCh371251,638,342 - 51,664,199 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361249,925,400 - 49,950,469 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1250,440,592 - 50,465,681 (-)NCBICelera
Cytogenetic Map12q13.13NCBI
HuRef1248,672,138 - 48,696,941 (-)NCBIHuRef
CHM1_11251,605,311 - 51,630,387 (-)NCBICHM1_1
T2T-CHM13v2.01251,207,455 - 51,233,306 (-)NCBIT2T-CHM13v2.0
Smagp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3915100,519,220 - 100,534,821 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl15100,519,220 - 100,534,821 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm3815100,621,339 - 100,636,940 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl15100,621,339 - 100,636,940 (-)Ensemblmm10GRCm38
MGSCv3715100,451,770 - 100,467,296 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv3615100,449,373 - 100,464,899 (-)NCBIMGSCv36mm8
Celera15102,775,040 - 102,791,423 (-)NCBICelera
Cytogenetic Map15F1NCBI
cM Map1556.37NCBI
Smagp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555471,742,597 - 1,766,487 (-)Ensembl
ChiLan1.0NW_0049555471,742,597 - 1,766,460 (-)NCBIChiLan1.0ChiLan1.0
SMAGP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21042,912,014 - 42,941,449 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11242,913,168 - 42,939,618 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01237,483,621 - 37,508,898 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11238,367,550 - 38,391,870 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1238,367,974 - 38,391,870 (+)EnsemblpanPan2panpan1.1
SMAGP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1273,614,888 - 3,616,519 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl273,614,963 - 3,615,929 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2742,639,161 - 42,656,424 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0273,646,732 - 3,664,069 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl273,646,293 - 3,664,978 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1273,614,020 - 3,631,285 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0273,600,542 - 3,617,848 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02743,036,235 - 43,053,653 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Smagp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494564,302,000 - 64,321,179 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365128,843,546 - 8,862,876 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365128,841,943 - 8,862,882 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SMAGP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.2517,309,510 - 17,357,618 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SMAGP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11147,444,542 - 47,469,480 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1147,443,313 - 47,469,595 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666037198,627,038 - 198,652,320 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Smagp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624816999,072 - 1,018,638 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624816997,774 - 1,019,168 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Smagp
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11262,474,098 - 262,490,939 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Smagp
86 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:76
Count of miRNA genes:63
Interacting mature miRNAs:70
Transcripts:ENSRNOT00000073536
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7110725024135371468Rat
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7121393075137014596Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)7132099939137014596Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)798549867137014596Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7119280025135560836Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)7100548246137014596Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)795485047137014596Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)782111245134948181Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7115313999136544683Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7104186212135371468Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)792362341137014596Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)771827901136544683Rat

Markers in Region
RH137012  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr87133,599,814 - 133,600,025 (+)Marker Load Pipeline
mRatBN7.27131,721,031 - 131,721,242 (+)MAPPERmRatBN7.2
Rnor_6.07142,245,067 - 142,245,277NCBIRnor6.0
Rnor_5.07140,049,722 - 140,049,932UniSTSRnor5.0
RGSC_v3.47139,368,158 - 139,368,368UniSTSRGSC3.4
Celera7128,196,266 - 128,196,476UniSTS
Cytogenetic Map7q36UniSTS
RH127546  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27131,719,950 - 131,720,150 (+)MAPPERmRatBN7.2
Rnor_6.07142,243,986 - 142,244,185NCBIRnor6.0
Rnor_5.07140,048,641 - 140,048,840UniSTSRnor5.0
RGSC_v3.47139,367,077 - 139,367,276UniSTSRGSC3.4
Celera7128,195,185 - 128,195,384UniSTS
RH 3.4 Map71075.3UniSTS
Cytogenetic Map7q36UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 160 91 90 59 92 59 6 356 192 11 139 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000073536   ⟹   ENSRNOP00000066061
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl7142,244,295 - 142,260,896 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000094601   ⟹   ENSRNOP00000077274
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7133,600,273 - 133,616,642 (-)Ensembl
mRatBN7.2 Ensembl7131,721,490 - 131,737,860 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000115577   ⟹   ENSRNOP00000092007
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7131,718,740 - 131,722,931 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117455   ⟹   ENSRNOP00000088015
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7131,718,740 - 131,738,691 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000123755   ⟹   ENSRNOP00000105395
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7133,599,043 - 133,616,327 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000158393   ⟹   ENSRNOP00000105786
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7133,599,043 - 133,601,714 (-)Ensembl
RefSeq Acc Id: NM_182817   ⟹   NP_877969
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87133,599,043 - 133,616,327 (-)NCBI
mRatBN7.27131,720,260 - 131,737,545 (-)NCBI
Rnor_6.07142,244,295 - 142,260,896 (-)NCBI
Rnor_5.07140,048,950 - 140,066,042 (-)NCBI
RGSC_v3.47139,367,386 - 139,403,817 (-)RGD
Celera7128,195,494 - 128,213,797 (-)RGD
Sequence:
RefSeq Acc Id: XM_006242323   ⟹   XP_006242385
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87133,599,721 - 133,616,317 (-)NCBI
mRatBN7.27131,720,915 - 131,737,471 (-)NCBI
Rnor_6.07142,244,950 - 142,260,824 (-)NCBI
Rnor_5.07140,048,950 - 140,066,042 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039078935   ⟹   XP_038934863
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87133,599,721 - 133,617,492 (-)NCBI
mRatBN7.27131,720,915 - 131,738,711 (-)NCBI
Protein Sequences
Protein RefSeqs NP_877969 (Get FASTA)   NCBI Sequence Viewer  
  XP_006242385 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934863 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI01911 (Get FASTA)   NCBI Sequence Viewer  
  CAE12295 (Get FASTA)   NCBI Sequence Viewer  
  EDL86928 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000088015.1
  ENSRNOP00000105395
GenBank Protein Q7TPF1 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_877969   ⟸   NM_182817
- UniProtKB: Q7TPF1 (UniProtKB/Swiss-Prot),   A6KCL4 (UniProtKB/TrEMBL),   A0A8I6AGS8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006242385   ⟸   XM_006242323
- Peptide Label: isoform X1
- UniProtKB: Q7TPF1 (UniProtKB/Swiss-Prot),   A6KCL4 (UniProtKB/TrEMBL),   A0A8I6AGS8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000066061   ⟸   ENSRNOT00000073536
RefSeq Acc Id: XP_038934863   ⟸   XM_039078935
- Peptide Label: isoform X1
- UniProtKB: Q7TPF1 (UniProtKB/Swiss-Prot),   A6KCL4 (UniProtKB/TrEMBL),   A0A8I6AGS8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000077274   ⟸   ENSRNOT00000094601
Ensembl Acc Id: ENSRNOP00000088015   ⟸   ENSRNOT00000117455
Ensembl Acc Id: ENSRNOP00000092007   ⟸   ENSRNOT00000115577
Ensembl Acc Id: ENSRNOP00000105786   ⟸   ENSRNOT00000158393
Ensembl Acc Id: ENSRNOP00000105395   ⟸   ENSRNOT00000123755

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TPF1-F1-model_v2 AlphaFold Q7TPF1 1-97 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695662
Promoter ID:EPDNEW_R6186
Type:initiation region
Name:Smagp_1
Description:small cell adhesion glycoprotein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.07142,260,892 - 142,260,952EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:727777 AgrOrtholog
BioCyc Gene G2FUF-32013 BioCyc
Ensembl Genes ENSRNOG00000048932 Ensembl
  ENSRNOG00000062981 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000117455.1 UniProtKB/Swiss-Prot
  ENSRNOT00000123755 ENTREZGENE
IMAGE_CLONE IMAGE:7933976 IMAGE-MGC_LOAD
InterPro SMAGP UniProtKB/Swiss-Prot
KEGG Report rno:300236 UniProtKB/Swiss-Prot
MGC_CLONE MGC:124543 IMAGE-MGC_LOAD
NCBI Gene 300236 ENTREZGENE
PANTHER PTHR47394 UniProtKB/Swiss-Prot
  SMALL CELL ADHESION GLYCOPROTEIN UniProtKB/Swiss-Prot
PhenoGen Smagp PhenoGen
RatGTEx ENSRNOG00000048932 RatGTEx
  ENSRNOG00000062981 RatGTEx
UniProt A0A8I5YCA6_RAT UniProtKB/TrEMBL
  A0A8I6AGS8 ENTREZGENE
  A0ABK0LPR9_RAT UniProtKB/TrEMBL
  A6KCL4 ENTREZGENE, UniProtKB/TrEMBL
  Q7TPF1 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-08-01 Smagp  small cell adhesion glycoprotein  Smagp  small trans-membrane and glycosylated protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-07 Smagp  small trans-membrane and glycosylated protein  Smagp  small cell adhesion glycoprotein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-07-08 Smagp  small cell adhesion glycoprotein  smagp    Symbol updated 1299863 APPROVED