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Gene: Opcml (opioid binding protein/cell adhesion molecule-like) Rattus norvegicus

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Symbol:

Opcml

Name:

opioid binding protein/cell adhesion molecule-like

RGD ID:

620635

Description:

Involved in negative regulation of glial cell proliferation; positive regulation of cell size; and positive regulation of synapse assembly. Located in apical dendrite; dendritic spine; and neuronal cell body. Is active in postsynaptic density. Human ortholog(s) of this gene implicated in ovarian cancer. Orthologous to human OPCML (opioid binding protein/cell adhesion molecule like); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

OBCAM; opioid-binding cell adhesion molecule; opioid-binding protein/cell adhesion molecule; opioid-binding protein/cell adhesion molecule-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	OPCML (opioid binding protein/cell adhesion molecule like)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Opcml (opioid binding protein/cell adhesion molecule-like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Opcml (opioid binding protein/cell adhesion molecule like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	OPCML (opioid binding protein/cell adhesion molecule like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	OPCML (opioid binding protein/cell adhesion molecule like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	LOC101971822 (opioid-binding protein/cell adhesion molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	OPCML (opioid binding protein/cell adhesion molecule like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	OPCML (opioid binding protein/cell adhesion molecule like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Opcml (opioid binding protein/cell adhesion molecule like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Opcml (opioid binding protein/cell adhesion molecule like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	NTM (neurotrimin)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	OPCML (opioid binding protein/cell adhesion molecule like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Opcml (opioid binding protein/cell adhesion molecule-like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	opcml (opioid binding protein/cell adhesion molecule-like)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Ama	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	rig-5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG31814	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG45781	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG45781	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	DIP-alpha	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	DIP-beta	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	DIP-epsilon	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	DIP-eta	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	DIP-gamma	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	DIP-iota	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	DIP-theta	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	DIP-zeta	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	opcml	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	34,451,629 - 35,562,897 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	34,451,500 - 35,558,966 (+)	Ensembl				GRCr8
mRatBN7.2	8	26,788,988 - 27,304,551 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	26,192,841 - 27,300,620 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	30,831,472 - 31,354,741 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	29,125,801 - 29,649,064 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	27,009,961 - 27,528,810 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	28,842,202 - 29,967,300 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	29,453,643 - 29,962,825 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	28,857,932 - 29,978,200 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	27,996,301 - 28,509,065 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	28,273,156 - 28,783,272 (+)	NCBI		Celera
RGSC_v3.1	8	27,996,397 - 28,509,162 (+)	NCBI
Cytogenetic Map	8	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

ovarian cancer (ISO)

Ovarian Neoplasms (ISO)

schizophrenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,4'-trichlorobiphenyl (ISO)

2-palmitoylglycerol (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

barium sulfate (EXP)

benzo[a]pyrene (EXP,ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Butylbenzyl phthalate (ISO)

C60 fullerene (EXP)

ceric oxide (EXP)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP)

diclofenac (ISO)

dimethylarsinic acid (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

ethanol (EXP,ISO)

fenvalerate (EXP)

flavonoids (EXP)

folic acid (ISO)

fulvestrant (ISO)

glyphosate (EXP)

indometacin (EXP)

ivermectin (ISO)

lead(0) (ISO)

methoxychlor (EXP)

mono(2-ethylhexyl) phthalate (ISO)

niclosamide (ISO)

panobinostat (ISO)

PCB138 (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctanoic acid (EXP)

phenformin (EXP)

pioglitazone (ISO)

rotenone (EXP,ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

testosterone (EXP)

titanium dioxide (ISO)

trichostatin A (ISO)

triclosan (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

XL147 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell adhesion (IEA)

heterophilic cell-cell adhesion (IBA)

negative regulation of glial cell proliferation (IDA,IEA)

positive regulation of cell size (IDA)

positive regulation of synapse assembly (IDA)

regulation of synapse assembly (IBA)

Cellular Component

apical dendrite (IDA)

dendritic spine (IDA)

neuronal cell body (IDA)

plasma membrane (IBA,IEA)

postsynaptic density (IBA,IDA)

side of membrane (IEA)

synapse (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
2.	IgLON cell adhesion molecules regulate synaptogenesis in hippocampal neurons.	Hashimoto T, etal., Cell Biochem Funct. 2009 Oct;27(7):496-8. doi: 10.1002/cbf.1600.
3.	Opioid-binding cell adhesion molecule (OBCAM)-related clones from a rat brain cDNA library.	Lippman DA, etal., Gene 1992 Aug 15;117(2):249-54.
4.	Biochemical and ultrastructural analyses of IgLON cell adhesion molecules, Kilon and OBCAM in the rat brain.	Miyata S, etal., Neuroscience. 2003;117(3):645-58. doi: 10.1016/s0306-4522(02)00873-4.
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
9.	Overexpression of IgLON cell adhesion molecules changes proliferation and cell size of cortical astrocytes.	Sugimoto C, etal., Cell Biochem Funct. 2012 Jul;30(5):400-5. doi: 10.1002/cbf.2813. Epub 2012 Feb 28.

Additional References at PubMed

PMID:7891157	PMID:14596858	PMID:19943852	PMID:23376485

Genomics

Comparative Map Data

Opcml
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	34,451,629 - 35,562,897 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	34,451,500 - 35,558,966 (+)	Ensembl				GRCr8
mRatBN7.2	8	26,788,988 - 27,304,551 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	26,192,841 - 27,300,620 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	30,831,472 - 31,354,741 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	29,125,801 - 29,649,064 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	27,009,961 - 27,528,810 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	28,842,202 - 29,967,300 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	29,453,643 - 29,962,825 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	28,857,932 - 29,978,200 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	27,996,301 - 28,509,065 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	28,273,156 - 28,783,272 (+)	NCBI		Celera
RGSC_v3.1	8	27,996,397 - 28,509,162 (+)	NCBI
Cytogenetic Map	8	q13	NCBI

OPCML
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	132,414,981 - 133,532,501 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	132,414,977 - 133,532,501 (-)	Ensembl			hg38	GRCh38
GRCh37	11	132,284,875 - 133,402,396 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	131,790,085 - 132,907,613 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	131,790,086 - 132,318,247	NCBI
Celera	11	129,456,242 - 130,574,897 (-)	NCBI		Celera
Cytogenetic Map	11	q25	NCBI
HuRef	11	128,240,684 - 128,768,428 (-)	NCBI		HuRef
CHM1_1	11	132,172,051 - 133,290,318 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	132,453,523 - 133,574,050 (-)	NCBI		T2T-CHM13v2.0

Opcml
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	27,702,050 - 28,836,706 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	27,702,071 - 28,836,706 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	27,790,716 - 28,925,410 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	27,790,775 - 28,925,410 (+)	Ensembl			mm10	GRCm38
MGSCv37	9	27,598,854 - 28,732,643 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	27,540,715 - 28,674,504 (+)	NCBI		MGSCv36	mm8
Celera	9	25,048,809 - 26,182,472 (+)	NCBI		Celera
Cytogenetic Map	9	A4	NCBI
cM Map	9	13.73	NCBI

Opcml
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	33,256,352 - 34,383,243 (-)	Ensembl
ChiLan1.0	NW_004955412	33,256,013 - 34,385,603 (-)	NCBI	ChiLan1.0	ChiLan1.0

OPCML
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	133,101,081 - 134,246,526 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	134,212,702 - 135,352,710 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	127,233,465 - 128,377,367 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	131,117,659 - 132,246,315 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

OPCML
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	2,175,002 - 2,725,878 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	2,175,075 - 2,655,602 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	1,762,971 - 2,781,251 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	1,600,357 - 2,620,428 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	1,600,450 - 2,620,421 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	1,632,492 - 2,657,700 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	1,633,356 - 2,646,280 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	1,670,829 - 2,685,911 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

LOC101971822
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	114,350,370 - 114,372,667 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936572	77,755 - 100,166 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

OPCML
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	59,037,714 - 60,140,839 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	59,037,711 - 60,141,162 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	65,485,634 - 65,514,812 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

OPCML
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	123,446,497 - 124,617,242 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	123,451,729 - 123,698,280 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	1,419,513 - 2,579,683 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Opcml
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624812	6,875,314 - 8,042,482 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624812	6,852,568 - 8,042,583 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Opcml
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	23,654,966 - 24,759,599 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Opcml
2686 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	117
Count of miRNA genes:	96
Interacting mature miRNAs:	103
Transcripts:	ENSRNOT00000042890
Prediction methods:	Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357398	Slep3	Serum leptin concentration QTL 3	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
2317030	Wbc5	White blood cell count QTL 5	3.21	0.005	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	8	16994642	61994642	Rat
12880044	Am9	Aortic mass QTL 9		0.007	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	10382540	55382540	Rat
631648	Stl5	Serum triglyceride level QTL 5	4	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	35464071	71842899	Rat
2317032	Ginf2	Gastrointestinal inflammation QTL 2	3.21	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	8	12964165	57964165	Rat
2301416	Bp315	Blood pressure QTL 315		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	15952279	60952279	Rat
631842	Inf1	Infertility severity QTL 1	4.1	0.001	seminal gland mass (VT:0010524)	seminal vesicle wet weight (CMO:0001603)	8	31543661	76543661	Rat
2317036	Livw3	Liver weight QTL 3	2.43	0.01	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	8	12964165	57964165	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
1598824	Memor4	Memory QTL 4	2.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	8	17993862	62252873	Rat
12880023	Bw184	Body weight QTL 184		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	10382540	55382540	Rat
12880028	Cm103	Cardiac mass QTL 103		0.02	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	10382540	55382540	Rat
2317051	Aia18	Adjuvant induced arthritis QTL 18	2.42		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	8	16994642	61994642	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
1359021	Bp271	Blood pressure QTL 271	1.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	34125902	55607752	Rat
2317048	Ginf1	Gastrointestinal inflammation QTL 1	3.52	0.005	cecum mucosa thickness (VT:0010234)	enterocolitis severity score (CMO:0002138)	8	12964165	57964165	Rat
2302367	Slep5	Serum leptin concentration QTL 5	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
12880025	Cm102	Cardiac mass QTL 102		0.044	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	8	10382540	55382540	Rat

Markers in Region

D8Rat190

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	26,916,854 - 26,916,981 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	29,580,453 - 29,580,579	NCBI	Rnor6.0
Rnor_5.0	8	29,591,143 - 29,591,269	UniSTS	Rnor5.0
RGSC_v3.4	8	28,124,112 - 28,124,238	UniSTS	RGSC3.4
RGSC_v3.4	8	28,124,042 - 28,124,422	RGD	RGSC3.4
Celera	8	28,400,137 - 28,400,263	UniSTS
RGSC_v3.1	8	28,124,209 - 28,124,335	RGD
RH 3.4 Map	8	228.1	RGD
RH 3.4 Map	8	228.1	UniSTS
RH 2.0 Map	8	195.5	RGD
SHRSP x BN Map	8	18.55	RGD
Cytogenetic Map	8	q13	UniSTS

D8Rat164

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	8	35,464,071 - 35,464,259 (+)	Marker Load Pipeline
mRatBN7.2	8	27,205,715 - 27,205,905 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	29,867,983 - 29,868,170	NCBI	Rnor6.0
Rnor_5.0	8	29,878,681 - 29,878,868	UniSTS	Rnor5.0
RGSC_v3.4	8	28,414,004 - 28,414,191	RGD	RGSC3.4
RGSC_v3.4	8	28,414,005 - 28,414,192	UniSTS	RGSC3.4
Celera	8	28,688,571 - 28,688,755	UniSTS
RGSC_v3.1	8	28,414,101 - 28,414,288	RGD
RH 3.4 Map	8	229.3	UniSTS
RH 3.4 Map	8	229.3	RGD
RH 2.0 Map	8	186.1	RGD
SHRSP x BN Map	8	18.55	RGD
Cytogenetic Map	8	q13	UniSTS

D8Got30

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	8	35,423,214 - 35,423,454 (+)	Marker Load Pipeline
mRatBN7.2	8	27,164,859 - 27,165,099 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	29,826,894 - 29,827,133	NCBI	Rnor6.0
Rnor_5.0	8	29,837,592 - 29,837,831	UniSTS	Rnor5.0
RGSC_v3.4	8	28,372,864 - 28,373,104	RGD	RGSC3.4
RGSC_v3.4	8	28,372,865 - 28,373,104	UniSTS	RGSC3.4
Celera	8	28,647,744 - 28,647,983	UniSTS
RGSC_v3.1	8	28,372,962 - 28,373,201	RGD
RH 3.4 Map	8	229.3	UniSTS
RH 3.4 Map	8	229.3	RGD
RH 2.0 Map	8	224.1	RGD
Cytogenetic Map	8	q13	UniSTS

D8Got361

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	27,260,504 - 27,260,693 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	29,923,260 - 29,923,446	NCBI	Rnor6.0
Rnor_5.0	8	29,934,125 - 29,934,311	UniSTS	Rnor5.0
RGSC_v3.4	8	28,469,432 - 28,469,618	UniSTS	RGSC3.4
Celera	8	28,743,760 - 28,743,918	UniSTS
Cytogenetic Map	8	q13	UniSTS

RH69042

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	27,299,142 - 27,299,264 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	29,961,892 - 29,962,013	NCBI	Rnor6.0
Rnor_5.0	8	29,972,796 - 29,972,917	UniSTS	Rnor5.0
RGSC_v3.4	8	28,508,143 - 28,508,264	UniSTS	RGSC3.4
Celera	8	28,782,350 - 28,782,471	UniSTS
Cytogenetic Map	8	q13	UniSTS

BF410517

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	27,151,462 - 27,151,673 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	29,813,625 - 29,813,835	NCBI	Rnor6.0
Rnor_5.0	8	29,824,121 - 29,824,331	UniSTS	Rnor5.0
RGSC_v3.4	8	28,358,971 - 28,359,181	UniSTS	RGSC3.4
Celera	8	28,634,473 - 28,634,683	UniSTS
RH 3.4 Map	8	230.6	UniSTS
Cytogenetic Map	8	q13	UniSTS

BF405647

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	27,121,042 - 27,121,147 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	29,783,313 - 29,783,417	NCBI	Rnor6.0
Rnor_5.0	8	29,793,809 - 29,793,913	UniSTS	Rnor5.0
RGSC_v3.4	8	28,328,619 - 28,328,723	UniSTS	RGSC3.4
Celera	8	28,604,030 - 28,604,134	UniSTS
RH 3.4 Map	8	228.0	UniSTS
Cytogenetic Map	8	q13	UniSTS

G45150

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	27,121,214 - 27,121,456 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	29,783,485 - 29,783,726	NCBI	Rnor6.0
Rnor_5.0	8	29,793,981 - 29,794,222	UniSTS	Rnor5.0
RGSC_v3.4	8	28,328,791 - 28,329,032	UniSTS	RGSC3.4
Celera	8	28,604,202 - 28,604,443	UniSTS
Cytogenetic Map	8	q13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
11	12	67	159	89	88	57	33	57	6	282	133	11	138	73	90	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001440069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001440070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_053848	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595412	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264779	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264780	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC110642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M88709	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M88710	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M88711	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000042890 ⟹ ENSRNOP00000044106

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	27,050,696 - 27,300,620 (+)	Ensembl
Rnor_6.0 Ensembl	8	29,714,285 - 29,962,825 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000090643 ⟹ ENSRNOP00000073684

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	34,451,500 - 35,558,966 (+)	Ensembl
mRatBN7.2 Ensembl	8	26,192,841 - 27,300,620 (+)	Ensembl
Rnor_6.0 Ensembl	8	29,453,643 - 29,961,975 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094289 ⟹ ENSRNOP00000085431

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	35,309,056 - 35,558,966 (+)	Ensembl
mRatBN7.2 Ensembl	8	26,789,434 - 27,300,620 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000137975 ⟹ ENSRNOP00000103226

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	35,048,306 - 35,558,966 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000157922 ⟹ ENSRNOP00000110858

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	35,048,306 - 35,558,576 (+)	Ensembl

RefSeq Acc Id:

NM_053848 ⟹ NP_446300

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	35,048,040 - 35,558,411 (+)	NCBI
mRatBN7.2	8	26,789,668 - 27,300,065 (+)	NCBI
Rnor_6.0	8	29,453,178 - 29,962,814 (+)	NCBI
Rnor_5.0	8	28,857,932 - 29,978,200 (+)	NCBI
RGSC_v3.4	8	27,996,301 - 28,509,065 (+)	RGD
Celera	8	28,273,156 - 28,783,272 (+)	RGD

Sequence:

show sequence

CTTTTTTTTATTTTTTATTTTTTTTACGACATCTCCTTTCTGTCAGAGACACTTGCCTTCTTTG
GGTTATAAACTTTTGATGCCAGACCTCTGCAGAATCGCCCAACTGAATCTTAAAGTAGCTTCAC
CGAGAGAGGCAGAGAACGCACAATCTGTGACCTTCGTCCCTGCTCCTTTTTTGTGTTCTCCCTC
CTCCCGGGCTCCCTCCGCCCCAGGGAGCGTTGAGAAAGCTCTTTTTTGGATGCAGGAGGGGGCA
TCTGGTTCTGCCAGGCTGGAAAGCTGAGGCTGGAGCAGAGGAAGACTTATTAGACTCCGGAGAG
CCTGGACTCAGCCTTGCCTTCTCCCGCTCCCAGCTCCTGGTTTGCTCTCTGTGTGCTTTCGTCC
CTCAACATTCCGGCTATTCTGAGAGGGCAGGGGACAAGGACCGTGCAGCTGCAAGAGTTCTAGG
AAGTTGTGGCTGTCGAGAATGGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGG
TCGTGTCTCTGAGGCTGCTGTTCCTTGTACCCACAGGAGTGCCGGTGCGCAGCGGAGATGCCAC
CTTTCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGAGAGAGCGCCACCCTCAGGTGTACC
ATAGATGACCGGGTCACCAGAGTAGCCTGGCTAAACCGCAGCACAATCCTCTACGCTGGGAATG
ACAAGTGGTCCATAGACCCTCGAGTGATCATCTTGGTCAACACGCCTACCCAGTACAGTATCAT
GATCCAGAATGTGGATGTTTATGACGAAGGTCCGTACACCTGCTCTGTGCAGACAGACAATCAC
CCCAAAACCTCCCGGGTCCACCTCATAGTGCAAGTTCCTCCCCAGATAATGAACATCTCTTCAG
ACATTACTGTGAATGAGATAAGCAGTGTGACCTTGTTATGTCTCGCAATTGGCAGACCAGAACC
AACAGTGACATGGCGACACCTGTCAGTCAAGGAAGGCCAGGGCTTTGTGAGTGAAGATGAATAC
CTGGAAATCTCAGACATCAAACGCGACCAATCTGGAGAGTATGAGTGCAGCGCCTTGAATGATG
TCGCTGCACCTGATGTTCGGAAAGTAAAAATCACTGTAAACTATCCTCCCTATATCTCAAAAGC
GAAGAACACTGGCGTTTCAGTAGGCCAGAAGGGCATCCTGAGCTGTGAAGCCTCTGCTGTCCCC
ATGGCTGAATTCCAGTGGTTCAAGGAAGATACCAGGTTAGCCACTGGCCTGGATGGCGTGAGAA
TTGAGAACAAAGGCCGCATATCCACTTTGACTTTCTTCAATGTCTCAGAGAAGGATTATGGGAA
CTATACCTGTGTGGCCACAAACAAGCTTGGGAACACCAATGCCAGCATCACCCTGTATGGGCCT
GGAGCAGTCATTGATGGTGTAAACTCGGCCTCTAGAGCACTGGCTTGTCTCTGGCTCTCAGGGA
CCTTCTTTGCCCACTTCTTCATCAAGTTTTGATAAGAAACCTTAGGTCCTCTGAGCATCGCCTG
CTTCTCCATATCACAGACTTTAATCTACACTGCGGAGGGGCAAACCAGTTTGGGCTTTCTTTTG
GTTATTTTTTTGTTCTTCTTGACTGTTTAGTTTTTTGGTTTGATTTCTGGGATTTTCAATTTGA
TTTGTTTTTCTTTTTTCGTTTGAATGGACCGGGGTTGGGGGTTGGGATGGGCAGGGTTCTACCA
CGAGTAGGATAATCAGGTATTGGTGGGCCCCCAAATGGAATATATTCCTGCTACCTTGGCCTTC
CTTTTCTCTACTTCTCTTCCTACCACCATTAACACACAAACACACAAGCACACGCCCTAAAGAT
GGCCTAAAAAATGTCCCATGACACGCACCCTGAAGGTACAACTTGGCCCACAGTGCAGTACACA
ATAAGAGTTGCATCTACATTTCCTGTTTTCTTTGTCCTTTAAGTTTTCAATAAGACAGTTTAAA
AAGAGCACATCCTTATCCCTATGTTTGTATCACCTATCCCATTAAGCTGCACACCTTTTCTAAG
AAACTTTCTTACTACATCCTCAATGTGCACACATGTACATTCTCATAAAAATTTTACCATCTTC
TCTGGCCATTCTGCTTAATCTGCATTTTCCACTAGCAGTAAGACTTACAGGCTTGATGAAATAT
ACATGTATCCAAAGCTACAAATTTAGAAGTCACGAGGGAAGTCTATCTAGGGGTAGTACTTCCC
TTAAAATGCTAATGCAACTCATAAAAAAGTGATCAATAGCTAGCTAATTATATCAAGCTATCAA
AGCAATCATATTATTATCCAGTTACTCAATTGA

hide sequence

RefSeq Acc Id:

XM_017595412 ⟹ XP_017450901

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	35,047,359 - 35,562,897 (+)	NCBI
mRatBN7.2	8	26,788,988 - 27,304,551 (+)	NCBI
Rnor_6.0	8	29,452,497 - 29,967,300 (+)	NCBI

Sequence:

show sequence

ATATCAGGGGAAGCAGTGAGAGGGACTCAGCACCTCCTCATCTCGCTGGGGTACAAAGGGAGAG
CAGAGCTTTTTGAGTCACTAGGCACCTTCCCTCTGGGATCCGGGCCTCGGTGGATGCTTCTGTC
CCGGTGCTGATGGGGGTTAAGGTGGGCGACCGCGCCCCGCACCCGCCAGGATGAGCGTGCAGCA
GTCCGCGCCACCCGCCAGCCGGCTTGCTCTGAGTCGACACCGGGAGAAAGTGGTGGTCAGGGAT
GCTGCTGCTGCCATGACAACCCCGGAGGTCCGGGCCCGCGCGCGTCGGGGCTGCTCCCCGGAGG
AAGGCGGCGCGGAAGCTGGGGGCGGCCGCTGAGCGTGGCGTCCGCGCGTCCCCGCATCCCGTGC
AGCGTCCCTGGAGGAGGCGGGGGCCGCAGTCCGCTCGCTCAGCTCCCCGCGCTAGAGCCTGCGC
CACGGTGCTCCGCGGGCTGGCGAGGGCCGGGCTGGCAGGACTCGCCCACTGGGCTACCGGGAGG
ACAGCCTCGGAGCGGAGGAACTGGGCTACACCTGCTGCGGGTCACCGTGTGGAACTTTTTATCG
CCTTGGGGTCCAGATCCGAGACTCGGGGCTGTTTTCTAACTCCATCCAAACATGTGTGTGATCT
AATAAAACATGTTCTCCTCTCCTTGAAATCGGGAGCTTTTATTTTTTATTTTTTATTTTTTTTA
CGACATCTCCTTTCTGTCAGAGACACTTGCCTTCTTTGGGTTATAAACTTTTGATGCCAGACCT
CTGCAGAATGCGCCCAACTGAATCTTAAAGTAGCTTCACCGAGAGAGGCAGAGAACGCACAATC
TGTGACCTTCGTCCCTGCTCCTTTTTTGTGTTCTCCCTCCTCCCGGGCTCCCTCCGCCCCAGGG
AGCGTTGAGAAAGCTCTTTTTTGGATGCAGGAGGGGGCATCTGGTTCTGCCAGGCTGGAAAGCT
GAGGCTGGAGCAGAGGAAGACTTATTAGACTCCGGAGAGCCTGGACTCAGCCTTGCCTTCTCCC
GCTCCCAGCTCCTGGTTTGCTCTCTGTGTGCTTTCGTCCCTCAACACTTCCGGCTATTCTGAGA
GGGCAGGGGACAAGGACCGTGCAGCTGCAAGAGTTCTAGGAAGTTGTGGCTGTCGAGAATGGGG
GTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCC
TTGTACCCACAGGAGTGCCGGTGCGCAGCGGAGATGCCACCTTTCCCAAAGCTATGGACAACGT
GACGGTCCGGCAGGGAGAGAGCGCCACCCTCAGGTGTACCATAGATGACCGGGTCACCAGAGTA
GCCTGGCTAAACCGCAGCACAATCCTCTACGCTGGGAATGACAAGTGGTCCATAGACCCTCGAG
TGATCATCTTGGTCAACACGCCTACCCAGTACAGTATCATGATCCAGAATGTGGATGTTTATGA
CGAAGGTCCGTACACCTGCTCTGTGCAGACAGACAATCACCCCAAAACCTCCCGGGTCCACCTC
ATAGTGCAAGTTCCTCCCCAGATAATGAACATCTCTTCAGACATTACTGTGAATGAAGGAAGCA
GTGTGACCCTGTTATGTCTCGCAATTGGCAGACCAGAACCAACAGTGACATGGCGACACCTGTC
AGTCAAGGAAGGCCAGGGCTTTGTGAGTGAAGATGAATACCTGGAAATCTCAGACATCAAACGC
GACCAATCTGGAGAGTATGAGTGCAGCGCCTTGAATGATGTCGCTGCACCTGATGTTCGGAAAG
TAAAAATCACTGTAAACTATCCTCCCTATATCTCAAAAGCGAAGAACACTGGCGTTTCAGTCGG
CCAGAAGGGCATCCTGAGCTGTGAAGCCTCTGCTGTCCCCATGGCTGAATTCCAGTGGTTCAAG
GAAGATACCAGGTTAGCCACTGGCCTGGATGGCGTGAGAATTGAGAACAAAGGCCGCATATCCA
CTTTGACTTTCTTCAATGTCTCAGAGAAGGATTATGGGAACTATACCTGTGTGGCCACAAACAA
GCTTGGGAACACCAATGCCAGCATCACCCTGTATGAAATAAGCCCCTCATCAGCAGTGGCAGGG
CCTGGAGCAGTCATTGATGGTGTAAACTCGGCCTCTAGAGCACTGGCTTGTCTCTGGCTCTCAG
GGACCTTCTTTGCCCACTTCTTCATCAAGTTTTGATAAGAAACCTTAGGTCCTCTGAGCATCGC
CTGCTTCTCCATATCACAGACTTTAATCTACACTGCGGAGGGGCAAACCAGTTTGGGCTTCTTT
TTGGTTATTTTTTTGTTCTTCTTGACTGTTTAGTTTTTTGGTTTGATTTCTGGGATTTTCAATT
TGATTTGATTTTTCTTTTTTCGTTTGAATGGACGGGGTTGGGGGTTGGGATGGGCAGGGTTCTA
CCACGAGTAGGATAATCATTCATTGGTGGGCCCCCAAATGGAATATATTCCTGCTACCTTGGCC
TTCCTTTTCTCTACTTCTCTTCCTACCACCATTAACACACAAACACACAAGCACACGCCCTAAA
GATGGCCTAAAAAATGTCCCATGACACGCACCCTGAAGGTACAACTTGGCCCACAGTGCAGTAC
ACAATAAGAGTTGCATCTACATTTCCTGTTTTCTTTGTCCTTTAAGTTTTCAATAAGACAGTTT
AAAAAGAGCACATCCTTATCCCTATGTTTGTATCACCTATCCCATTAAGCTGCACACCTTTTCT
AAGAAACTTTCTTACTACATCCTCAATGTGCACACATGTACATTCTCATAAAAATTTTACCATC
TTCTCTGGCCATTCTGCTTAATCTGCATTTTTTCCACTAGCAGTAAGACTTACAGGCTTGATGA
AAATATACATGTATCCAAAGCTACAAATTTAGGAGTCACGAGGGAAGTCTATCTAGGGGTAGTA
CTTCCCTTAAAATGCTAATGCAACTCATAAAAAAGTGATCAATAGCTAGCTAATTATATCAAGC
TATCAAAGCAATCATATTATTATCCAGTTACTCAATTGATTTCTCTCTCCATCTCCTTCTACAT
ACCTATCTTTCTTATAATCTATTTGTTCAATTTATCTAACTACTCTTTTTCTCTTCCCACTGCA
CTATCCATTCATCTCATTTAAATCTCTAATCATATTGTGACTGTGCCCTTATATTGTGTCTCTG
CACTACCACCAAGACATTGCCACCTTCAAAATTGCCTAGCAACTTCTTATGTGAAAGCCAGTAA
TGTCACGGGCTAACTACCCAGAAGAACAATTTCCTATACCATGGATCCTTGGGAATGCACTAAC
CCATCCACCCAAATTAGGCCTTGTGAACAGATGGACCAAAGTAGCAATCTATGGATCAGTCACT
CATGATTTTCCGAGAGACTGTTCCCTTAGCCACCTTCTCAGGAGGCAGGTCAGCCCCGAAGAAG
CCTTGATTATGCTGAATTTCTCCTTTAACAGCTGGAAAATTAAGGTACCAACCCTGTGCTTCTC
TCAGCCTTTCAAGAAAAGTACATGTCAGGAACTTGGAGAAACTTCTTCATGGCTGGCTTTTATT
AGCAGAAAGAACCTGACCAAAAAAAAACCAAAAAAAACAAAAAAACAAAAAAACAACAACAACA
ACAACAAAAAAAAACCAAACCCATATATCTATCCCTTCGATTTAAAGACAGCAGTCCATCAGCT
GAAGTGTGATAACTAGAGCCCAGCATCTCCCTTCTGCTCCAGTTTTGATTTGAATTGTTTGAAA
ATTATCCAGCAAAGGGCTGATGGAGGCCAATTATGTGGCGTGTGTGTTGACAACTGTGGTATTT
GTTTCAGAAAGCTCTTCTGAGCTGAGGGCACTTGAGCTACTGACTTAATTTCCAAGCACTTGAT
TAACACAACATGGCAAACAGAGGGGGAAGTGGAAGTAATACTGTTTTCCTAGGCTGTTTCTCTA
GAGGTTTCCAGGATAAAAGTTCCCAAATTCCTAGGTTCAAAGTAGGCCTCATGTACAAAGATTG
GATTCCACCTCTCAGCATTCTCTTGAGCAAAGAAGAACCCAGCCAACAAGGGAGACTGAAGTTC
AAAGGAACATCATTAAAGGTCACAAGAGGCTCTCTGGAGAGAATGTCTTACTGTGAAATTGAGA
AAGAGCACCAGCAGTGACTTTCTTAAAGACATGTCTTGCCTCCCTCAGGGACCCTTTTAAGGTC
CACCCCTAAAAAGTAAATGACTGCGGGCTCCTTTAGAGTTCATTTCCCTTAGAGCTTAACCACT
TGTTGCAGTATAACTGCCCACTCTATGGCACTATGGCCCCACAAATACAATACCCACAGTAGGA
GCATATATACCTGTGTATAGATATTCACATATATACAAATGCAGGCTCCCTTGGCATACAAAAG
CTCGGCACTGTCATAAGAGATAGAGCTGGGGTGAGCAAAATTAATACTCTTCTTGCCAGCTGTA
AACAGACATCTGCATTTCCCAGCGAGCTGCCAAGAACGAGACTCTGGGAGCATAAATGATGTGC
CAAAAGCAGTCTATTTATTCCAACTTCCAGAAGCAATCAGGAGCAGGCACGAAGTCAGAATTAC
AGGTCGGATATATGAATTTCAGATCTGTCACCATGCTCAGCACCTGGGATTGGGTTGGTGTCAA
GCATTGTATGAGACATAAACATGGCATTTGCGTTTTCTACTAATACTACAGTCATTGCTTTGGA
GAAAAGGAAATGTGGATGCCATGGAAACTGAAAAGTGTTGGGTGATGTGCTGCTCGAAATGGAC
AAGCCCAAATTGCTCTTCACCACCTTGGGCAAGCAGATCATCAGAAGCCCAATTGAGTATGGAC
TCAGGGTCATCATGCCTCTCTGCCGTGCCTACTTTCACTGGAAACTAGAAGTTTCTCTGGTGGT
TACTTATTCCACCCAAACTTCAGAAGGAAACACATGTTCCAGACAATCCTCCTCTGTCTGGGAA
AAATAAAGCCCAGTAGAAATGACGTAAGGTAACTGGGCACCAGATATGAAAGTGACTTCCTTAC
AGTAAACATGCCCCAGCTCTTGTTATTTAAGTGACTTTGGTAAGGATGCCTCCATGTGATGGGG
CCTGATTCCCCACACTCGGAAGCAAATACAACAGCAATTGCTTACTAAAAACAACATACACACT
TACACCAGCCCGGAAGCAAATACAACAGCAATTGCTTACTAAAAACAACATACACACTTACACC
AGCCCGGAAGCAAATACAACAGCAATTGCTTACTAAAAACAACACACACACTTACACCAGCCTT
TCCAACTCTACACAAAGAGAGTGGATGGATCAGGCCCACTAGACAGTTTTATTTAGCTTGCCAA
GAGTGAGCATGAGGAAGGTATAAGGTTAGGAAAAAAAGAATCACATTACTCTATGTAGCTGGTA
GAACATTGTGGGTTTTCTAAGTGAAAACCAAATACAGTTCATCAAGAGATTAGGTGAAAGGAAG
TCAGCAAAAATAGACATTCTAAAACTTCTCCCCTTCCCAAAACAATGCTAATTTGTTCTTCCAC
CAAAGTAATGCCAATGAAAGTGCCAGTGTTATGCCTCTGGCAAAGCCTGGTTTTTGAGTAGTTT
AATGTCAAGTGCCTGATACAGTCATCTGCAAGTTTAATCAAGGGTGTTTGGATTTTCTTTTTTG
TTCTCATTGGGAAGGTTGGAGATGTAGGGATTACTTGTCCAAACATACACAGCTCTTACACAGA
GAGCTAGGTACATGGCTCTTCTGCAGTGGGCTATGCTATGTTCAACAGACAGAAATGGACATCT
GTATGTCACCAAGATGGCTCACGCCTGTCCTTACACTGCTTTGTGCTGTTGTTCACAGGTTGGG
AAGTTAGTTTTTAAAGTATGGATTGCTAGGATCCTCATAACTGAGGGTGCGTTTTAACAATCTC
TTTTTATATCCACCTGGTCAAGTTGTCCTCAGCAAGAAGAAATAGCAAATCTACCCACAATAAG
AAAAATGTCAATAGAGCAGACCGCCCCCCCCCAAGTGGACACTTGGTCCTATAGAATTTATCAC
AGTCACAGCCACTGGATGAGGAATGGTTGGAAATTGCATACTAATGTTTTGACTGATGCTTCCA
GGGTCAAAGAACACATGTTCTTAGTAGCCTGTATGGCTATTACCAGCCCCATAAGAAATGGTGG
GGAAGAATAGTGAAGAATATGAAGAAGTGAAGGAGTTATCTGCCCCCAATTTGATGCTGAGTTT
TCACCAGGATTGAAAAAACAAATGGTTTGACAATACCCAGAATACCCCTTTCCTCTCCAGAGCT
ATTCTTGTTGGAATTAGAGGAAGCAACATAATTCTTACTTTTATTTTTTTCAGGGCAAAATGTA
TTTTTCTCCAACAGCAAGAATATTTGGGTTTTCTTTGGCACAAGCCTCATTTCTAGAAATCCTC
ATGTCCGATTGCTTCCCCCTTATTATCCAAAGCTTCGCTCTCTCTTTCTTTCAAGACAAATACG
TTTAAGTAGCTGCAGTCGCACCTCACAGGTGTTCAGAGAGAAGGGCGACACTGTACCGGATGCC
CTATGACTAGAACTTCTAATGACCACACAGAAAGCAAACAAATAAAAAACGCCAGGCTCATTTC
CCTCATTTCTTACTTAACAGAAGAGAAGTAAATGAAAGGAAGAAGAAATAGATTTGGTAATTAA
AAATGTGGCAAGACGATAAAGCAGAACCGGTGTGATTTAGCCTTCAGGTGCAGAAATATGGAGT
CCAAAAGAACGTGGAGTGGACTTCATTAGATGCAATTGTCTTCATAGTGAAAGTAGCCAGCTAA
ACCCAATCTCCGGCATTTTGGAAGAGACTTCCCGCACCCCCTCCTGTGAGTGCTGCCCTTTTCA
GGCATATGGTTGTTCCACACCACTAGGTGGAGAAAGAAGGATTGAGAGCTTCCCACCGTCCTGG
TGGGGCTCCATCCTACGTTATTTGGCAGAGTATAAGAATCTCAATAATAACAATGGTAAGTATT
ACTAGCTGCCCTTGTGTTAGTGAAGAGGAACATTTTTAATCATTCAGAAATTTTCGTGACATGT
AAAGTGCAATTGTGAGGAATGTGTGGGTGTACGAAAATGTATCTGTCAAGTTCAGAGTCCTCTA
GATTAAAAAGAAAACTTATATGATTATCAATGGTGCCGTTAATAGATGTGTTGGACAATGGGTG
TACCCCATTTTTGCAATTATTCTCAAAACAAATCTATGTTCAGATGCTTTAAAATTTTATCACA
TGATACAAAAATATAACTTTGTCAGCCTTTAAAAGTTCTTTCTTTCTTTTACTTATTTTTTTTC
CTTCAAAAATCAATGAAGACTTGATTTCTGTCACTCATTGTATTGAGGGTGAATATACTACCTG
AATTTTGTGCATGTTACATTGTAGTTGTAACCTTTTCTAATTCAGGATGAATACAAGATGGTTG
TGATTGTGCAGTGTATCAATAAAGTTTGAAGAAATTTGTAACTTT

hide sequence

RefSeq Acc Id:

XM_017595413 ⟹ XP_017450902

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	35,047,359 - 35,562,897 (+)	NCBI
mRatBN7.2	8	26,788,988 - 27,304,551 (+)	NCBI
Rnor_6.0	8	29,452,497 - 29,967,300 (+)	NCBI

Sequence:

show sequence

ATATCAGGGGAAGCAGTGAGAGGGACTCAGCACCTCCTCATCTCGCTGGGGTACAAAGGGAGAG
CAGAGCTTTTTGAGTCACTAGGCACCTTCCCTCTGGGATCCGGGCCTCGGTGGATGCTTCTGTC
CCGGTGCTGATGGGGGTTAAGGTGGGCGACCGCGCCCCGCACCCGCCAGGATGAGCGTGCAGCA
GTCCGCGCCACCCGCCAGCCGGCTTGCTCTGAGTCGACACCGGGAGAAAGTGGTGGTCAGGGAT
GCTGCTGCTGCCATGACAACCCCGGAGGTCCGGGCCCGCGCGCGTCGGGGCTGCTCCCCGGAGG
AAGGCGGCGCGGAAGCTGGGGGCGGCCGCTGAGCGTGGCGTCCGCGCGTCCCCGCATCCCGTGC
AGCGTCCCTGGAGGAGGCGGGGGCCGCAGTCCGCTCGCTCAGCTCCCCGCGCTAGAGCCTGCGC
CACGGTGCTCCGCGGGCTGGCGAGGGCCGGGCTGGCAGGACTCGCCCACTGGGCTACCGGGAGG
ACAGCCTCGGAGCGGAGGAACTGGGCTACACCTGCTGCGGGTCACCGTGTGGAACTTTTTATCG
CCTTGGGGTCCAGATCCGAGACTCGGGGCTGTTTTCTAACTCCATCCAAACATGTGTGTGATCT
AATAAAACATGTTCTCCTCTCCTTGAAATCGGGAGCTTTTATTTTTTATTTTTTATTTTTTTTA
CGACATCTCCTTTCTGTCAGAGACACTTGCCTTCTTTGGGTTATAAACTTTTGATGCCAGACCT
CTGCAGAATGCGCCCAACTGAATCTTAAAGTAGCTTCACCGAGAGAGGCAGAGAACGCACAATC
TGTGACCTTCGTCCCTGCTCCTTTTTTGTGTTCTCCCTCCTCCCGGGCTCCCTCCGCCCCAGGG
AGCGTTGAGAAAGCTCTTTTTTGGATGCAGGAGGGGGCATCTGGTTCTGCCAGGCTGGAAAGCT
GAGGCTGGAGCAGAGGAAGACTTATTAGACTCCGGAGAGCCTGGACTCAGCCTTGCCTTCTCCC
GCTCCCAGCTCCTGGTTTGCTCTCTGTGTGCTTTCGTCCCTCAACACTTCCGGCTATTCTGAGA
GGGCAGGGGACAAGGACCGTGCAGCTGCAAGAGTTCTAGGAAGTTGTGGCTGTCGAGAATGGGG
GTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCC
TTGTACCCACAGGAGTGCCGGTGCGCAGCGGAGATGCCACCTTTCCCAAAGCTATGGACAACGT
GACGGTCCGGCAGGGAGAGAGCGCCACCCTCAGGTGTACCATAGATGACCGGGTCACCAGAGTA
GCCTGGCTAAACCGCAGCACAATCCTCTACGCTGGGAATGACAAGTGGTCCATAGACCCTCGAG
TGATCATCTTGGTCAACACGCCTACCCAGTACAGTATCATGATCCAGAATGTGGATGTTTATGA
CGAAGGTCCGTACACCTGCTCTGTGCAGACAGACAATCACCCCAAAACCTCCCGGGTCCACCTC
ATAGTGCAAGTTCCTCCCCAGATAATGAACATCTCTTCAGACATTACTGTGAATGAAGGAAGCA
GTGTGACCCTGTTATGTCTCGCAATTGGCAGACCAGAACCAACAGTGACATGGCGACACCTGTC
AGTCAAGGGCCAGGGCTTTGTGAGTGAAGATGAATACCTGGAAATCTCAGACATCAAACGCGAC
CAATCTGGAGAGTATGAGTGCAGCGCCTTGAATGATGTCGCTGCACCTGATGTTCGGAAAGTAA
AAATCACTGTAAACTATCCTCCCTATATCTCAAAAGCGAAGAACACTGGCGTTTCAGTCGGCCA
GAAGGGCATCCTGAGCTGTGAAGCCTCTGCTGTCCCCATGGCTGAATTCCAGTGGTTCAAGGAA
GATACCAGGTTAGCCACTGGCCTGGATGGCGTGAGAATTGAGAACAAAGGCCGCATATCCACTT
TGACTTTCTTCAATGTCTCAGAGAAGGATTATGGGAACTATACCTGTGTGGCCACAAACAAGCT
TGGGAACACCAATGCCAGCATCACCCTGTATGAAATAAGCCCCTCATCAGCAGTGGCAGGGCCT
GGAGCAGTCATTGATGGTGTAAACTCGGCCTCTAGAGCACTGGCTTGTCTCTGGCTCTCAGGGA
CCTTCTTTGCCCACTTCTTCATCAAGTTTTGATAAGAAACCTTAGGTCCTCTGAGCATCGCCTG
CTTCTCCATATCACAGACTTTAATCTACACTGCGGAGGGGCAAACCAGTTTGGGCTTCTTTTTG
GTTATTTTTTTGTTCTTCTTGACTGTTTAGTTTTTTGGTTTGATTTCTGGGATTTTCAATTTGA
TTTGATTTTTCTTTTTTCGTTTGAATGGACGGGGTTGGGGGTTGGGATGGGCAGGGTTCTACCA
CGAGTAGGATAATCATTCATTGGTGGGCCCCCAAATGGAATATATTCCTGCTACCTTGGCCTTC
CTTTTCTCTACTTCTCTTCCTACCACCATTAACACACAAACACACAAGCACACGCCCTAAAGAT
GGCCTAAAAAATGTCCCATGACACGCACCCTGAAGGTACAACTTGGCCCACAGTGCAGTACACA
ATAAGAGTTGCATCTACATTTCCTGTTTTCTTTGTCCTTTAAGTTTTCAATAAGACAGTTTAAA
AAGAGCACATCCTTATCCCTATGTTTGTATCACCTATCCCATTAAGCTGCACACCTTTTCTAAG
AAACTTTCTTACTACATCCTCAATGTGCACACATGTACATTCTCATAAAAATTTTACCATCTTC
TCTGGCCATTCTGCTTAATCTGCATTTTTTCCACTAGCAGTAAGACTTACAGGCTTGATGAAAA
TATACATGTATCCAAAGCTACAAATTTAGGAGTCACGAGGGAAGTCTATCTAGGGGTAGTACTT
CCCTTAAAATGCTAATGCAACTCATAAAAAAGTGATCAATAGCTAGCTAATTATATCAAGCTAT
CAAAGCAATCATATTATTATCCAGTTACTCAATTGATTTCTCTCTCCATCTCCTTCTACATACC
TATCTTTCTTATAATCTATTTGTTCAATTTATCTAACTACTCTTTTTCTCTTCCCACTGCACTA
TCCATTCATCTCATTTAAATCTCTAATCATATTGTGACTGTGCCCTTATATTGTGTCTCTGCAC
TACCACCAAGACATTGCCACCTTCAAAATTGCCTAGCAACTTCTTATGTGAAAGCCAGTAATGT
CACGGGCTAACTACCCAGAAGAACAATTTCCTATACCATGGATCCTTGGGAATGCACTAACCCA
TCCACCCAAATTAGGCCTTGTGAACAGATGGACCAAAGTAGCAATCTATGGATCAGTCACTCAT
GATTTTCCGAGAGACTGTTCCCTTAGCCACCTTCTCAGGAGGCAGGTCAGCCCCGAAGAAGCCT
TGATTATGCTGAATTTCTCCTTTAACAGCTGGAAAATTAAGGTACCAACCCTGTGCTTCTCTCA
GCCTTTCAAGAAAAGTACATGTCAGGAACTTGGAGAAACTTCTTCATGGCTGGCTTTTATTAGC
AGAAAGAACCTGACCAAAAAAAAACCAAAAAAAACAAAAAAACAAAAAAACAACAACAACAACA
ACAAAAAAAAACCAAACCCATATATCTATCCCTTCGATTTAAAGACAGCAGTCCATCAGCTGAA
GTGTGATAACTAGAGCCCAGCATCTCCCTTCTGCTCCAGTTTTGATTTGAATTGTTTGAAAATT
ATCCAGCAAAGGGCTGATGGAGGCCAATTATGTGGCGTGTGTGTTGACAACTGTGGTATTTGTT
TCAGAAAGCTCTTCTGAGCTGAGGGCACTTGAGCTACTGACTTAATTTCCAAGCACTTGATTAA
CACAACATGGCAAACAGAGGGGGAAGTGGAAGTAATACTGTTTTCCTAGGCTGTTTCTCTAGAG
GTTTCCAGGATAAAAGTTCCCAAATTCCTAGGTTCAAAGTAGGCCTCATGTACAAAGATTGGAT
TCCACCTCTCAGCATTCTCTTGAGCAAAGAAGAACCCAGCCAACAAGGGAGACTGAAGTTCAAA
GGAACATCATTAAAGGTCACAAGAGGCTCTCTGGAGAGAATGTCTTACTGTGAAATTGAGAAAG
AGCACCAGCAGTGACTTTCTTAAAGACATGTCTTGCCTCCCTCAGGGACCCTTTTAAGGTCCAC
CCCTAAAAAGTAAATGACTGCGGGCTCCTTTAGAGTTCATTTCCCTTAGAGCTTAACCACTTGT
TGCAGTATAACTGCCCACTCTATGGCACTATGGCCCCACAAATACAATACCCACAGTAGGAGCA
TATATACCTGTGTATAGATATTCACATATATACAAATGCAGGCTCCCTTGGCATACAAAAGCTC
GGCACTGTCATAAGAGATAGAGCTGGGGTGAGCAAAATTAATACTCTTCTTGCCAGCTGTAAAC
AGACATCTGCATTTCCCAGCGAGCTGCCAAGAACGAGACTCTGGGAGCATAAATGATGTGCCAA
AAGCAGTCTATTTATTCCAACTTCCAGAAGCAATCAGGAGCAGGCACGAAGTCAGAATTACAGG
TCGGATATATGAATTTCAGATCTGTCACCATGCTCAGCACCTGGGATTGGGTTGGTGTCAAGCA
TTGTATGAGACATAAACATGGCATTTGCGTTTTCTACTAATACTACAGTCATTGCTTTGGAGAA
AAGGAAATGTGGATGCCATGGAAACTGAAAAGTGTTGGGTGATGTGCTGCTCGAAATGGACAAG
CCCAAATTGCTCTTCACCACCTTGGGCAAGCAGATCATCAGAAGCCCAATTGAGTATGGACTCA
GGGTCATCATGCCTCTCTGCCGTGCCTACTTTCACTGGAAACTAGAAGTTTCTCTGGTGGTTAC
TTATTCCACCCAAACTTCAGAAGGAAACACATGTTCCAGACAATCCTCCTCTGTCTGGGAAAAA
TAAAGCCCAGTAGAAATGACGTAAGGTAACTGGGCACCAGATATGAAAGTGACTTCCTTACAGT
AAACATGCCCCAGCTCTTGTTATTTAAGTGACTTTGGTAAGGATGCCTCCATGTGATGGGGCCT
GATTCCCCACACTCGGAAGCAAATACAACAGCAATTGCTTACTAAAAACAACATACACACTTAC
ACCAGCCCGGAAGCAAATACAACAGCAATTGCTTACTAAAAACAACATACACACTTACACCAGC
CCGGAAGCAAATACAACAGCAATTGCTTACTAAAAACAACACACACACTTACACCAGCCTTTCC
AACTCTACACAAAGAGAGTGGATGGATCAGGCCCACTAGACAGTTTTATTTAGCTTGCCAAGAG
TGAGCATGAGGAAGGTATAAGGTTAGGAAAAAAAGAATCACATTACTCTATGTAGCTGGTAGAA
CATTGTGGGTTTTCTAAGTGAAAACCAAATACAGTTCATCAAGAGATTAGGTGAAAGGAAGTCA
GCAAAAATAGACATTCTAAAACTTCTCCCCTTCCCAAAACAATGCTAATTTGTTCTTCCACCAA
AGTAATGCCAATGAAAGTGCCAGTGTTATGCCTCTGGCAAAGCCTGGTTTTTGAGTAGTTTAAT
GTCAAGTGCCTGATACAGTCATCTGCAAGTTTAATCAAGGGTGTTTGGATTTTCTTTTTTGTTC
TCATTGGGAAGGTTGGAGATGTAGGGATTACTTGTCCAAACATACACAGCTCTTACACAGAGAG
CTAGGTACATGGCTCTTCTGCAGTGGGCTATGCTATGTTCAACAGACAGAAATGGACATCTGTA
TGTCACCAAGATGGCTCACGCCTGTCCTTACACTGCTTTGTGCTGTTGTTCACAGGTTGGGAAG
TTAGTTTTTAAAGTATGGATTGCTAGGATCCTCATAACTGAGGGTGCGTTTTAACAATCTCTTT
TTATATCCACCTGGTCAAGTTGTCCTCAGCAAGAAGAAATAGCAAATCTACCCACAATAAGAAA
AATGTCAATAGAGCAGACCGCCCCCCCCCAAGTGGACACTTGGTCCTATAGAATTTATCACAGT
CACAGCCACTGGATGAGGAATGGTTGGAAATTGCATACTAATGTTTTGACTGATGCTTCCAGGG
TCAAAGAACACATGTTCTTAGTAGCCTGTATGGCTATTACCAGCCCCATAAGAAATGGTGGGGA
AGAATAGTGAAGAATATGAAGAAGTGAAGGAGTTATCTGCCCCCAATTTGATGCTGAGTTTTCA
CCAGGATTGAAAAAACAAATGGTTTGACAATACCCAGAATACCCCTTTCCTCTCCAGAGCTATT
CTTGTTGGAATTAGAGGAAGCAACATAATTCTTACTTTTATTTTTTTCAGGGCAAAATGTATTT
TTCTCCAACAGCAAGAATATTTGGGTTTTCTTTGGCACAAGCCTCATTTCTAGAAATCCTCATG
TCCGATTGCTTCCCCCTTATTATCCAAAGCTTCGCTCTCTCTTTCTTTCAAGACAAATACGTTT
AAGTAGCTGCAGTCGCACCTCACAGGTGTTCAGAGAGAAGGGCGACACTGTACCGGATGCCCTA
TGACTAGAACTTCTAATGACCACACAGAAAGCAAACAAATAAAAAACGCCAGGCTCATTTCCCT
CATTTCTTACTTAACAGAAGAGAAGTAAATGAAAGGAAGAAGAAATAGATTTGGTAATTAAAAA
TGTGGCAAGACGATAAAGCAGAACCGGTGTGATTTAGCCTTCAGGTGCAGAAATATGGAGTCCA
AAAGAACGTGGAGTGGACTTCATTAGATGCAATTGTCTTCATAGTGAAAGTAGCCAGCTAAACC
CAATCTCCGGCATTTTGGAAGAGACTTCCCGCACCCCCTCCTGTGAGTGCTGCCCTTTTCAGGC
ATATGGTTGTTCCACACCACTAGGTGGAGAAAGAAGGATTGAGAGCTTCCCACCGTCCTGGTGG
GGCTCCATCCTACGTTATTTGGCAGAGTATAAGAATCTCAATAATAACAATGGTAAGTATTACT
AGCTGCCCTTGTGTTAGTGAAGAGGAACATTTTTAATCATTCAGAAATTTTCGTGACATGTAAA
GTGCAATTGTGAGGAATGTGTGGGTGTACGAAAATGTATCTGTCAAGTTCAGAGTCCTCTAGAT
TAAAAAGAAAACTTATATGATTATCAATGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTAC
CCCATTTTTGCAATTATTCTCAAAACAAATCTATGTTCAGATGCTTTAAAATTTTATCACATGA
TACAAAAATATAACTTTGTCAGCCTTTAAAAGTTCTTTCTTTCTTTTACTTATTTTTTTTCCTT
CAAAAATCAATGAAGACTTGATTTCTGTCACTCATTGTATTGAGGGTGAATATACTACCTGAAT
TTTGTGCATGTTACATTGTAGTTGTAACCTTTTCTAATTCAGGATGAATACAAGATGGTTGTGA
TTGTGCAGTGTATCAATAAAGTTTGAAGAAATTTGTAACTTT

hide sequence

RefSeq Acc Id:

XM_017595415 ⟹ XP_017450904

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	35,047,359 - 35,562,897 (+)	NCBI
mRatBN7.2	8	26,788,988 - 27,304,551 (+)	NCBI
Rnor_6.0	8	29,452,497 - 29,967,300 (+)	NCBI

Sequence:

show sequence

ATATCAGGGGAAGCAGTGAGAGGGACTCAGCACCTCCTCATCTCGCTGGGGTACAAAGGGAGAG
CAGAGCTTTTTGAGTCACTAGGCACCTTCCCTCTGGGATCCGGGCCTCGGTGGATGCTTCTGTC
CCGGTGCTGATGGGGGTTAAGGTGGGCGACCGCGCCCCGCACCCGCCAGGATGAGCGTGCAGCA
GTCCGCGCCACCCGCCAGCCGGCTTGCTCTGAGTCGACACCGGGAGAAAGTGGTGGTCAGGGAT
GCTGCTGCTGCCATGACAACCCCGGAGGTCCGGGCCCGCGCGCGTCGGGGCTGCTCCCCGGAGG
AAGGCGGCGCGGAAGCTGGGGGCGGCCGCTGAGCGTGGCGTCCGCGCGTCCCCGCATCCCGTGC
AGCGTCCCTGGAGGAGGCGGGGGCCGCAGTCCGCTCGCTCAGCTCCCCGCGCTAGAGCCTGCGC
CACGGTGCTCCGCGGGCTGGCGAGGGCCGGGCTGGCAGGACTCGCCCACTGGGCTACCGGGAGG
ACAGCCTCGGAGCGGAGGAACTGGGCTACACCTGCTGCGGGTCACCGTGTGGAACTTTTTATCG
CCTTGGGGTCCAGATCCGAGACTCGGGGCTGTTTTCTAACTCCATCCAAACATGTGTGTGATCT
AATAAAACATGTTCTCCTCTCCTTGAAATCGGGAGCTTTTATTTTTTATTTTTTATTTTTTTTA
CGACATCTCCTTTCTGTCAGAGACACTTGCCTTCTTTGGGTTATAAACTTTTGATGCCAGACCT
CTGCAGAATGCGCCCAACTGAATCTTAAAGTAGCTTCACCGAGAGAGGCAGAGAACGCACAATC
TGTGACCTTCGTCCCTGCTCCTTTTTTGTGTTCTCCCTCCTCCCGGGCTCCCTCCGCCCCAGGG
AGCGTTGAGAAAGCTCTTTTTTGGATGCAGGAGGGGGCATCTGGTTCTGCCAGGCTGGAAAGCT
GAGGCTGGAGCAGAGGAAGACTTATTAGACTCCGGAGAGCCTGGACTCAGCCTTGCCTTCTCCC
GCTCCCAGCTCCTGGTTTGCTCTCTGTGTGCTTTCGTCCCTCAACACTTCCGGCTATTCTGAGA
GGGCAGGGGACAAGGACCGTGCAGCTGCAAGAGTTCTAGGAAGTTGTGGCTGTCGAGAATGGGG
GTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCC
TTGTACCCACAGGAGTGCCGGTGCGCAGCGGAGATGCCACCTTTCCCAAAGCTATGGACAACGT
GACGGTCCGGCAGGGAGAGAGCGCCACCCTCAGGTGTACCATAGATGACCGGGTCACCAGAGTA
GCCTGGCTAAACCGCAGCACAATCCTCTACGCTGGGAATGACAAGTGGTCCATAGACCCTCGAG
TGATCATCTTGGTCAACACGCCTACCCAGTACAGTATCATGATCCAGAATGTGGATGTTTATGA
CGAAGGTCCGTACACCTGCTCTGTGCAGACAGACAATCACCCCAAAACCTCCCGGGTCCACCTC
ATAGTGCAAGTTCCTCCCCAGATAATGAACATCTCTTCAGACATTACTGTGAATGAAGGAAGCA
GTGTGACCCTGTTATGTCTCGCAATTGGCAGACCAGAACCAACAGTGACATGGCGACACCTGTC
AGTCAAGGGCCAGGGCTTTGTGAGTGAAGATGAATACCTGGAAATCTCAGACATCAAACGCGAC
CAATCTGGAGAGTATGAGTGCAGCGCCTTGAATGATGTCGCTGCACCTGATGTTCGGAAAGTAA
AAATCACTGTAAACTATCCTCCCTATATCTCAAAAGCGAAGAACACTGGCGTTTCAGTCGGCCA
GAAGGGCATCCTGAGCTGTGAAGCCTCTGCTGTCCCCATGGCTGAATTCCAGTGGTTCAAGGAA
GATACCAGGTTAGCCACTGGCCTGGATGGCGTGAGAATTGAGAACAAAGGCCGCATATCCACTT
TGACTTTCTTCAATGTCTCAGAGAAGGATTATGGGAACTATACCTGTGTGGCCACAAACAAGCT
TGGGAACACCAATGCCAGCATCACCCTGTATGGGCCTGGAGCAGTCATTGATGGTGTAAACTCG
GCCTCTAGAGCACTGGCTTGTCTCTGGCTCTCAGGGACCTTCTTTGCCCACTTCTTCATCAAGT
TTTGATAAGAAACCTTAGGTCCTCTGAGCATCGCCTGCTTCTCCATATCACAGACTTTAATCTA
CACTGCGGAGGGGCAAACCAGTTTGGGCTTCTTTTTGGTTATTTTTTTGTTCTTCTTGACTGTT
TAGTTTTTTGGTTTGATTTCTGGGATTTTCAATTTGATTTGATTTTTCTTTTTTCGTTTGAATG
GACGGGGTTGGGGGTTGGGATGGGCAGGGTTCTACCACGAGTAGGATAATCATTCATTGGTGGG
CCCCCAAATGGAATATATTCCTGCTACCTTGGCCTTCCTTTTCTCTACTTCTCTTCCTACCACC
ATTAACACACAAACACACAAGCACACGCCCTAAAGATGGCCTAAAAAATGTCCCATGACACGCA
CCCTGAAGGTACAACTTGGCCCACAGTGCAGTACACAATAAGAGTTGCATCTACATTTCCTGTT
TTCTTTGTCCTTTAAGTTTTCAATAAGACAGTTTAAAAAGAGCACATCCTTATCCCTATGTTTG
TATCACCTATCCCATTAAGCTGCACACCTTTTCTAAGAAACTTTCTTACTACATCCTCAATGTG
CACACATGTACATTCTCATAAAAATTTTACCATCTTCTCTGGCCATTCTGCTTAATCTGCATTT
TTTCCACTAGCAGTAAGACTTACAGGCTTGATGAAAATATACATGTATCCAAAGCTACAAATTT
AGGAGTCACGAGGGAAGTCTATCTAGGGGTAGTACTTCCCTTAAAATGCTAATGCAACTCATAA
AAAAGTGATCAATAGCTAGCTAATTATATCAAGCTATCAAAGCAATCATATTATTATCCAGTTA
CTCAATTGATTTCTCTCTCCATCTCCTTCTACATACCTATCTTTCTTATAATCTATTTGTTCAA
TTTATCTAACTACTCTTTTTCTCTTCCCACTGCACTATCCATTCATCTCATTTAAATCTCTAAT
CATATTGTGACTGTGCCCTTATATTGTGTCTCTGCACTACCACCAAGACATTGCCACCTTCAAA
ATTGCCTAGCAACTTCTTATGTGAAAGCCAGTAATGTCACGGGCTAACTACCCAGAAGAACAAT
TTCCTATACCATGGATCCTTGGGAATGCACTAACCCATCCACCCAAATTAGGCCTTGTGAACAG
ATGGACCAAAGTAGCAATCTATGGATCAGTCACTCATGATTTTCCGAGAGACTGTTCCCTTAGC
CACCTTCTCAGGAGGCAGGTCAGCCCCGAAGAAGCCTTGATTATGCTGAATTTCTCCTTTAACA
GCTGGAAAATTAAGGTACCAACCCTGTGCTTCTCTCAGCCTTTCAAGAAAAGTACATGTCAGGA
ACTTGGAGAAACTTCTTCATGGCTGGCTTTTATTAGCAGAAAGAACCTGACCAAAAAAAAACCA
AAAAAAACAAAAAAACAAAAAAACAACAACAACAACAACAAAAAAAAACCAAACCCATATATCT
ATCCCTTCGATTTAAAGACAGCAGTCCATCAGCTGAAGTGTGATAACTAGAGCCCAGCATCTCC
CTTCTGCTCCAGTTTTGATTTGAATTGTTTGAAAATTATCCAGCAAAGGGCTGATGGAGGCCAA
TTATGTGGCGTGTGTGTTGACAACTGTGGTATTTGTTTCAGAAAGCTCTTCTGAGCTGAGGGCA
CTTGAGCTACTGACTTAATTTCCAAGCACTTGATTAACACAACATGGCAAACAGAGGGGGAAGT
GGAAGTAATACTGTTTTCCTAGGCTGTTTCTCTAGAGGTTTCCAGGATAAAAGTTCCCAAATTC
CTAGGTTCAAAGTAGGCCTCATGTACAAAGATTGGATTCCACCTCTCAGCATTCTCTTGAGCAA
AGAAGAACCCAGCCAACAAGGGAGACTGAAGTTCAAAGGAACATCATTAAAGGTCACAAGAGGC
TCTCTGGAGAGAATGTCTTACTGTGAAATTGAGAAAGAGCACCAGCAGTGACTTTCTTAAAGAC
ATGTCTTGCCTCCCTCAGGGACCCTTTTAAGGTCCACCCCTAAAAAGTAAATGACTGCGGGCTC
CTTTAGAGTTCATTTCCCTTAGAGCTTAACCACTTGTTGCAGTATAACTGCCCACTCTATGGCA
CTATGGCCCCACAAATACAATACCCACAGTAGGAGCATATATACCTGTGTATAGATATTCACAT
ATATACAAATGCAGGCTCCCTTGGCATACAAAAGCTCGGCACTGTCATAAGAGATAGAGCTGGG
GTGAGCAAAATTAATACTCTTCTTGCCAGCTGTAAACAGACATCTGCATTTCCCAGCGAGCTGC
CAAGAACGAGACTCTGGGAGCATAAATGATGTGCCAAAAGCAGTCTATTTATTCCAACTTCCAG
AAGCAATCAGGAGCAGGCACGAAGTCAGAATTACAGGTCGGATATATGAATTTCAGATCTGTCA
CCATGCTCAGCACCTGGGATTGGGTTGGTGTCAAGCATTGTATGAGACATAAACATGGCATTTG
CGTTTTCTACTAATACTACAGTCATTGCTTTGGAGAAAAGGAAATGTGGATGCCATGGAAACTG
AAAAGTGTTGGGTGATGTGCTGCTCGAAATGGACAAGCCCAAATTGCTCTTCACCACCTTGGGC
AAGCAGATCATCAGAAGCCCAATTGAGTATGGACTCAGGGTCATCATGCCTCTCTGCCGTGCCT
ACTTTCACTGGAAACTAGAAGTTTCTCTGGTGGTTACTTATTCCACCCAAACTTCAGAAGGAAA
CACATGTTCCAGACAATCCTCCTCTGTCTGGGAAAAATAAAGCCCAGTAGAAATGACGTAAGGT
AACTGGGCACCAGATATGAAAGTGACTTCCTTACAGTAAACATGCCCCAGCTCTTGTTATTTAA
GTGACTTTGGTAAGGATGCCTCCATGTGATGGGGCCTGATTCCCCACACTCGGAAGCAAATACA
ACAGCAATTGCTTACTAAAAACAACATACACACTTACACCAGCCCGGAAGCAAATACAACAGCA
ATTGCTTACTAAAAACAACATACACACTTACACCAGCCCGGAAGCAAATACAACAGCAATTGCT
TACTAAAAACAACACACACACTTACACCAGCCTTTCCAACTCTACACAAAGAGAGTGGATGGAT
CAGGCCCACTAGACAGTTTTATTTAGCTTGCCAAGAGTGAGCATGAGGAAGGTATAAGGTTAGG
AAAAAAAGAATCACATTACTCTATGTAGCTGGTAGAACATTGTGGGTTTTCTAAGTGAAAACCA
AATACAGTTCATCAAGAGATTAGGTGAAAGGAAGTCAGCAAAAATAGACATTCTAAAACTTCTC
CCCTTCCCAAAACAATGCTAATTTGTTCTTCCACCAAAGTAATGCCAATGAAAGTGCCAGTGTT
ATGCCTCTGGCAAAGCCTGGTTTTTGAGTAGTTTAATGTCAAGTGCCTGATACAGTCATCTGCA
AGTTTAATCAAGGGTGTTTGGATTTTCTTTTTTGTTCTCATTGGGAAGGTTGGAGATGTAGGGA
TTACTTGTCCAAACATACACAGCTCTTACACAGAGAGCTAGGTACATGGCTCTTCTGCAGTGGG
CTATGCTATGTTCAACAGACAGAAATGGACATCTGTATGTCACCAAGATGGCTCACGCCTGTCC
TTACACTGCTTTGTGCTGTTGTTCACAGGTTGGGAAGTTAGTTTTTAAAGTATGGATTGCTAGG
ATCCTCATAACTGAGGGTGCGTTTTAACAATCTCTTTTTATATCCACCTGGTCAAGTTGTCCTC
AGCAAGAAGAAATAGCAAATCTACCCACAATAAGAAAAATGTCAATAGAGCAGACCGCCCCCCC
CCAAGTGGACACTTGGTCCTATAGAATTTATCACAGTCACAGCCACTGGATGAGGAATGGTTGG
AAATTGCATACTAATGTTTTGACTGATGCTTCCAGGGTCAAAGAACACATGTTCTTAGTAGCCT
GTATGGCTATTACCAGCCCCATAAGAAATGGTGGGGAAGAATAGTGAAGAATATGAAGAAGTGA
AGGAGTTATCTGCCCCCAATTTGATGCTGAGTTTTCACCAGGATTGAAAAAACAAATGGTTTGA
CAATACCCAGAATACCCCTTTCCTCTCCAGAGCTATTCTTGTTGGAATTAGAGGAAGCAACATA
ATTCTTACTTTTATTTTTTTCAGGGCAAAATGTATTTTTCTCCAACAGCAAGAATATTTGGGTT
TTCTTTGGCACAAGCCTCATTTCTAGAAATCCTCATGTCCGATTGCTTCCCCCTTATTATCCAA
AGCTTCGCTCTCTCTTTCTTTCAAGACAAATACGTTTAAGTAGCTGCAGTCGCACCTCACAGGT
GTTCAGAGAGAAGGGCGACACTGTACCGGATGCCCTATGACTAGAACTTCTAATGACCACACAG
AAAGCAAACAAATAAAAAACGCCAGGCTCATTTCCCTCATTTCTTACTTAACAGAAGAGAAGTA
AATGAAAGGAAGAAGAAATAGATTTGGTAATTAAAAATGTGGCAAGACGATAAAGCAGAACCGG
TGTGATTTAGCCTTCAGGTGCAGAAATATGGAGTCCAAAAGAACGTGGAGTGGACTTCATTAGA
TGCAATTGTCTTCATAGTGAAAGTAGCCAGCTAAACCCAATCTCCGGCATTTTGGAAGAGACTT
CCCGCACCCCCTCCTGTGAGTGCTGCCCTTTTCAGGCATATGGTTGTTCCACACCACTAGGTGG
AGAAAGAAGGATTGAGAGCTTCCCACCGTCCTGGTGGGGCTCCATCCTACGTTATTTGGCAGAG
TATAAGAATCTCAATAATAACAATGGTAAGTATTACTAGCTGCCCTTGTGTTAGTGAAGAGGAA
CATTTTTAATCATTCAGAAATTTTCGTGACATGTAAAGTGCAATTGTGAGGAATGTGTGGGTGT
ACGAAAATGTATCTGTCAAGTTCAGAGTCCTCTAGATTAAAAAGAAAACTTATATGATTATCAA
TGGTGCCGTTAATAGATGTGTTGGACAATGGGTGTACCCCATTTTTGCAATTATTCTCAAAACA
AATCTATGTTCAGATGCTTTAAAATTTTATCACATGATACAAAAATATAACTTTGTCAGCCTTT
AAAAGTTCTTTCTTTCTTTTACTTATTTTTTTTCCTTCAAAAATCAATGAAGACTTGATTTCTG
TCACTCATTGTATTGAGGGTGAATATACTACCTGAATTTTGTGCATGTTACATTGTAGTTGTAA
CCTTTTCTAATTCAGGATGAATACAAGATGGTTGTGATTGTGCAGTGTATCAATAAAGTTTGAA
GAAATTTGTAACTTT

hide sequence

RefSeq Acc Id:

XM_063264778 ⟹ XP_063120848

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	34,451,629 - 35,562,897 (+)	NCBI

RefSeq Acc Id:

XM_063264779 ⟹ XP_063120849

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	34,451,629 - 35,562,897 (+)	NCBI

RefSeq Acc Id:

XM_063264780 ⟹ XP_063120850

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	34,451,629 - 35,562,897 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001426998	(Get FASTA)	NCBI Sequence Viewer
	NP_001426999	(Get FASTA)	NCBI Sequence Viewer
	NP_446300	(Get FASTA)	NCBI Sequence Viewer
	XP_017450901	(Get FASTA)	NCBI Sequence Viewer
	XP_017450902	(Get FASTA)	NCBI Sequence Viewer
	XP_017450904	(Get FASTA)	NCBI Sequence Viewer
	XP_063120848	(Get FASTA)	NCBI Sequence Viewer
	XP_063120849	(Get FASTA)	NCBI Sequence Viewer
	XP_063120850	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA40858	(Get FASTA)	NCBI Sequence Viewer
	AAA40859	(Get FASTA)	NCBI Sequence Viewer
	AAA40860	(Get FASTA)	NCBI Sequence Viewer
	EDL83330	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000073684
	ENSRNOP00000103226
	ENSRNOP00000110858
GenBank Protein	P32736	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_446300 ⟸ NM_053848
- Peptide Label:	precursor
- UniProtKB:	Q01654 (UniProtKB/Swiss-Prot), Q01653 (UniProtKB/Swiss-Prot), P32736 (UniProtKB/Swiss-Prot), P32735 (UniProtKB/Swiss-Prot), A0A8I6A2A2 (UniProtKB/TrEMBL), A6JYE6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTIDDRVT RVAWLNRSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRV HLIVQVPPQIMNISSDITVNEISSVTLLCLAIGRPEPTVTWRHLSVKEGQGFVSEDEYLEISDI KRDQSGEYECSALNDVAAPDVRKVKITVNYPPYISKAKNTGVSVGQKGILSCEASAVPMAEFQW FKEDTRLATGLDGVRIENKGRISTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYGPGAVIDG VNSASRALACLWLSGTFFAHFFIKF hide sequence

RefSeq Acc Id:	XP_017450901 ⟸ XM_017595412
- Peptide Label:	isoform X1
- UniProtKB:	Q01654 (UniProtKB/Swiss-Prot), Q01653 (UniProtKB/Swiss-Prot), P32736 (UniProtKB/Swiss-Prot), P32735 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTIDDRVT RVAWLNRSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRV HLIVQVPPQIMNISSDITVNEGSSVTLLCLAIGRPEPTVTWRHLSVKEGQGFVSEDEYLEISDI KRDQSGEYECSALNDVAAPDVRKVKITVNYPPYISKAKNTGVSVGQKGILSCEASAVPMAEFQW FKEDTRLATGLDGVRIENKGRISTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYEISPSSAV AGPGAVIDGVNSASRALACLWLSGTFFAHFFIKF hide sequence

RefSeq Acc Id:	XP_017450902 ⟸ XM_017595413
- Peptide Label:	isoform X2
- UniProtKB:	Q01654 (UniProtKB/Swiss-Prot), Q01653 (UniProtKB/Swiss-Prot), P32736 (UniProtKB/Swiss-Prot), P32735 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTIDDRVT RVAWLNRSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRV HLIVQVPPQIMNISSDITVNEGSSVTLLCLAIGRPEPTVTWRHLSVKGQGFVSEDEYLEISDIK RDQSGEYECSALNDVAAPDVRKVKITVNYPPYISKAKNTGVSVGQKGILSCEASAVPMAEFQWF KEDTRLATGLDGVRIENKGRISTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYEISPSSAVA GPGAVIDGVNSASRALACLWLSGTFFAHFFIKF hide sequence

RefSeq Acc Id:	XP_017450904 ⟸ XM_017595415
- Peptide Label:	isoform X4
- UniProtKB:	Q01654 (UniProtKB/Swiss-Prot), Q01653 (UniProtKB/Swiss-Prot), P32736 (UniProtKB/Swiss-Prot), P32735 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTIDDRVT RVAWLNRSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRV HLIVQVPPQIMNISSDITVNEGSSVTLLCLAIGRPEPTVTWRHLSVKGQGFVSEDEYLEISDIK RDQSGEYECSALNDVAAPDVRKVKITVNYPPYISKAKNTGVSVGQKGILSCEASAVPMAEFQWF KEDTRLATGLDGVRIENKGRISTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYGPGAVIDGV NSASRALACLWLSGTFFAHFFIKF hide sequence

Ensembl Acc Id:

ENSRNOP00000073684 ⟸ ENSRNOT00000090643

Ensembl Acc Id:

ENSRNOP00000044106 ⟸ ENSRNOT00000042890

Ensembl Acc Id:

ENSRNOP00000085431 ⟸ ENSRNOT00000094289

RefSeq Acc Id:	XP_063120848 ⟸ XM_063264778
- Peptide Label:	isoform X3
- UniProtKB:	Q01654 (UniProtKB/Swiss-Prot), Q01653 (UniProtKB/Swiss-Prot), P32736 (UniProtKB/Swiss-Prot), P32735 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063120849 ⟸ XM_063264779
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063120850 ⟸ XM_063264780
- Peptide Label:	isoform X6

Ensembl Acc Id:

ENSRNOP00000110858 ⟸ ENSRNOT00000157922

Ensembl Acc Id:

ENSRNOP00000103226 ⟸ ENSRNOT00000137975

Protein Domains

Ig-like Ig-like C2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P32736-F1-model_v2	AlphaFold	P32736	1-345	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:620635	AgrOrtholog
BioCyc Gene	G2FUF-31295	BioCyc
Ensembl Genes	ENSRNOG00000023809	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000090643	ENTREZGENE
	ENSRNOT00000137975	ENTREZGENE
	ENSRNOT00000157922	ENTREZGENE
Gene3D-CATH	2.60.40.10	UniProtKB/Swiss-Prot
InterPro	Ig-like_dom	UniProtKB/Swiss-Prot
	Ig-like_dom_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Ig_I-set	UniProtKB/Swiss-Prot
	Ig_sub	UniProtKB/Swiss-Prot
	Ig_sub2	UniProtKB/Swiss-Prot
	IgLON_domain	UniProtKB/Swiss-Prot
	Immunoglobulin	UniProtKB/Swiss-Prot
KEGG Report	rno:116597	UniProtKB/Swiss-Prot
NCBI Gene	116597	ENTREZGENE
PANTHER	IGLON FAMILY OF IMMUNOGLOBULIN SUPERFAMILY-RELATED	UniProtKB/Swiss-Prot
	OPIOID-BINDING PROTEIN_CELL ADHESION MOLECULE	UniProtKB/Swiss-Prot
Pfam	I-set	UniProtKB/Swiss-Prot
	Ig_3	UniProtKB/Swiss-Prot
	PF00047	UniProtKB/Swiss-Prot
PhenoGen	Opcml	PhenoGen
PROSITE	IG_LIKE	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000023809	RatGTEx
SMART	IGc2	UniProtKB/Swiss-Prot
	SM00409	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48726	UniProtKB/Swiss-Prot
UniProt	A0A0G2K657	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A2A2	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LIX4_RAT	UniProtKB/TrEMBL
	A0ABK0LNB0_RAT	UniProtKB/TrEMBL
	A6JYE4	ENTREZGENE, UniProtKB/TrEMBL
	A6JYE6	ENTREZGENE, UniProtKB/TrEMBL
	OPCM_RAT	UniProtKB/Swiss-Prot
	P32735	ENTREZGENE
	P32736	ENTREZGENE
	Q01653	ENTREZGENE
	Q01654	ENTREZGENE
UniProt Secondary	P32735	UniProtKB/Swiss-Prot
	Q01653	UniProtKB/Swiss-Prot
	Q01654	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Name	Description	Reference	Status
2006-03-30	Opcml	opioid binding protein/cell adhesion molecule-like	opioid-binding protein/cell adhesion molecule-like	Name updated	1299863	APPROVED
2005-01-20	Opcml	opioid-binding protein/cell adhesion molecule-like		Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Opcml	opioid-binding protein/cell adhesion molecule-like		Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_homology	identical to OBCAM in its C-terminal 318 amino acids	727538

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM