Ggt7 (gamma-glutamyltransferase 7) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Ggt7 (gamma-glutamyltransferase 7) Rattus norvegicus
Analyze
Symbol: Ggt7
Name: gamma-glutamyltransferase 7
RGD ID: 619870
Description: Predicted to enable glutathione hydrolase activity. Predicted to be involved in glutathione catabolic process and negative regulation of response to oxidative stress. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human GGT7 (gamma-glutamyltransferase 7); PARTICIPATES IN arachidonic acid metabolic pathway; cyanoamino acid metabolic pathway; glutathione metabolic pathway; INTERACTS WITH acetamide; alpha-Zearalanol; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: gamma-glutamyltransferase-like 3; gamma-glutamyltranspeptidase 7; GGT 7; Ggtl3; glutathione hydrolase 7
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83164,438,240 - 164,464,059 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3164,437,812 - 164,463,068 (-)EnsemblGRCr8
mRatBN7.23143,978,073 - 144,004,597 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3143,978,082 - 144,001,492 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3147,844,521 - 147,867,911 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03156,461,796 - 156,485,186 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03154,201,330 - 154,224,718 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03151,005,960 - 151,029,941 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,006,531 - 151,032,302 (-)Ensemblrn6Rnor6.0
Rnor_5.03157,373,960 - 157,400,349 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43145,987,531 - 146,010,922 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3142,702,677 - 142,726,067 (-)NCBICelera
RGSC_v3.13145,893,154 - 145,916,527 (-)NCBI
Cytogenetic Map3q42NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Molecular characterization of a novel gamma-glutamyl transpeptidase homologue found in rat brain. Yamaguchi T, etal., J Biochem (Tokyo) 2000 Jul;128(1):101-6.
Additional References at PubMed
PMID:8889548   PMID:12270127   PMID:22871113   PMID:25884624  


Genomics

Comparative Map Data
Ggt7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83164,438,240 - 164,464,059 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3164,437,812 - 164,463,068 (-)EnsemblGRCr8
mRatBN7.23143,978,073 - 144,004,597 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3143,978,082 - 144,001,492 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3147,844,521 - 147,867,911 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03156,461,796 - 156,485,186 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03154,201,330 - 154,224,718 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03151,005,960 - 151,029,941 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,006,531 - 151,032,302 (-)Ensemblrn6Rnor6.0
Rnor_5.03157,373,960 - 157,400,349 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43145,987,531 - 146,010,922 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3142,702,677 - 142,726,067 (-)NCBICelera
RGSC_v3.13145,893,154 - 145,916,527 (-)NCBI
Cytogenetic Map3q42NCBI
GGT7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382034,844,720 - 34,872,856 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2034,844,714 - 34,872,868 (-)Ensemblhg38GRCh38
GRCh372033,432,523 - 33,460,659 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362032,896,184 - 32,924,322 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342032,896,183 - 32,924,318NCBI
Celera2030,181,619 - 30,209,755 (-)NCBICelera
Cytogenetic Map20q11.22NCBI
HuRef2030,216,219 - 30,239,077 (-)NCBIHuRef
CHM1_12033,333,913 - 33,362,031 (-)NCBICHM1_1
T2T-CHM13v2.02036,565,362 - 36,593,497 (-)NCBIT2T-CHM13v2.0
Ggt7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392155,332,299 - 155,356,921 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2155,332,299 - 155,360,157 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm382155,490,379 - 155,514,891 (-)NCBIGRCm38GRCm38mm10GRCm38
Cytogenetic Map2H1NCBI
cM Map277.26NCBI
Ggt7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542226,502,463 - 26,530,416 (+)Ensembl
ChiLan1.0NW_00495542226,503,755 - 26,529,363 (+)NCBIChiLan1.0ChiLan1.0
GGT7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22140,577,681 - 40,605,927 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12040,561,915 - 40,598,999 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02031,173,216 - 31,201,434 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12032,298,084 - 32,325,869 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2032,298,699 - 32,325,869 (-)EnsemblpanPan2panpan1.1
GGT7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12423,900,842 - 23,924,555 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2423,901,045 - 23,997,286 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2423,546,999 - 23,570,714 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02424,592,227 - 24,616,376 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2424,591,554 - 24,616,447 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12423,880,017 - 23,903,731 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02423,974,877 - 23,999,003 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02424,413,600 - 24,437,711 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ggt7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640172,863,214 - 172,903,327 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365615,845,943 - 5,872,183 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365615,846,229 - 5,870,815 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GGT7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1738,231,084 - 38,255,884 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11738,231,083 - 38,255,915 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21743,403,290 - 43,427,939 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GGT7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1239,148,771 - 39,177,730 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl239,148,131 - 39,177,691 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605087,637,179 - 87,683,844 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ggt7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248424,526,536 - 4,554,253 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248424,526,618 - 4,551,644 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Ggt7
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15134,825,845 - 134,849,095 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ggt7
338 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:68
Count of miRNA genes:55
Interacting mature miRNAs:57
Transcripts:ENSRNOT00000025315
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3141555229186555229Rat
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141555229186555229Rat
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3141555229186555229Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3141555229186555229Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3151075912189428310Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3141555229186555229Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3141555229186555229Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161492708189428310Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
61335Bp20Blood pressure QTL 203arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161799493176036425Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1331726Bp208Blood pressure QTL 2083.129arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3161799270187311134Rat
1582213Insul6Insulin level QTL 63.70.0009blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3141508991166376254Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3152055202189428310Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3142898802187898802Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)3145335553189428310Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3125116475170116475Rat
1582256Insul9Insulin level QTL 94.40.0016blood insulin amount (VT:0001560)absolute change in serum insulin level (CMO:0002038)3155759447189428310Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3139299381184299381Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3122395989167395989Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3141508991177728348Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)3131036586176036586Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3137114333182114333Rat
1582248Insul7Insulin level QTL 73.90.0041blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)3131036586176036586Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)398651826167012663Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3151075912189428310Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3151075912189428310Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3141555229186555229Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3144575244189428310Rat
2293087Iddm27Insulin dependent diabetes mellitus QTL 272.68blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)3160357340167835660Rat

Markers in Region
AW529996  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23143,992,486 - 143,992,645 (+)MAPPERmRatBN7.2
Rnor_6.03151,020,896 - 151,021,054NCBIRnor6.0
Rnor_5.03157,388,366 - 157,388,524UniSTSRnor5.0
RGSC_v3.43146,001,937 - 146,002,095UniSTSRGSC3.4
Celera3142,717,083 - 142,717,241UniSTS
RH 3.4 Map31298.2UniSTS
Cytogenetic Map3q42UniSTS
AU046975  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr83164,445,764 - 164,446,008 (+)Marker Load Pipeline
mRatBN7.23143,985,604 - 143,985,848 (+)MAPPERmRatBN7.2
Rnor_6.03151,014,014 - 151,014,257NCBIRnor6.0
Rnor_5.03157,381,484 - 157,381,727UniSTSRnor5.0
RGSC_v3.43145,995,055 - 145,995,298UniSTSRGSC3.4
Celera3142,710,201 - 142,710,444UniSTS
Cytogenetic Map3q42UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 66 162 89 88 57 90 57 6 346 189 11 141 76 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_130423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008762300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008762301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039104154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039104155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039104156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039104157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039104158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039104159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039104160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039104162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063283023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA925130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC123188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF244973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB761916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000025315   ⟹   ENSRNOP00000025315
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3164,438,242 - 164,463,068 (-)Ensembl
mRatBN7.2 Ensembl3143,978,082 - 144,001,492 (-)Ensembl
Rnor_6.0 Ensembl3151,006,531 - 151,032,302 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000103394   ⟹   ENSRNOP00000085996
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3164,438,242 - 164,461,630 (-)Ensembl
mRatBN7.2 Ensembl3143,978,082 - 144,001,492 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110295   ⟹   ENSRNOP00000084236
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3164,438,242 - 164,461,151 (-)Ensembl
mRatBN7.2 Ensembl3143,978,083 - 144,001,396 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000161417   ⟹   ENSRNOP00000101168
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3164,437,812 - 164,461,630 (-)Ensembl
RefSeq Acc Id: NM_130423   ⟹   NP_569107
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,461,630 (-)NCBI
mRatBN7.23143,978,079 - 144,001,470 (-)NCBI
Rnor_6.03151,006,490 - 151,029,879 (-)NCBI
Rnor_5.03157,373,960 - 157,400,349 (-)NCBI
RGSC_v3.43145,987,531 - 146,010,922 (-)RGD
Celera3142,702,677 - 142,726,067 (-)RGD
Sequence:
RefSeq Acc Id: XM_008762300   ⟹   XP_008760522
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,464,059 (-)NCBI
mRatBN7.23143,978,079 - 144,004,597 (-)NCBI
Rnor_6.03151,005,960 - 151,029,941 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039104154   ⟹   XP_038960082
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,464,059 (-)NCBI
mRatBN7.23143,978,079 - 144,004,597 (-)NCBI
RefSeq Acc Id: XM_039104155   ⟹   XP_038960083
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,464,059 (-)NCBI
mRatBN7.23143,978,079 - 144,004,597 (-)NCBI
RefSeq Acc Id: XM_039104156   ⟹   XP_038960084
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,464,059 (-)NCBI
mRatBN7.23143,978,079 - 144,004,597 (-)NCBI
RefSeq Acc Id: XM_039104157   ⟹   XP_038960085
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,464,059 (-)NCBI
mRatBN7.23143,978,079 - 144,004,597 (-)NCBI
RefSeq Acc Id: XM_039104158   ⟹   XP_038960086
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,464,059 (-)NCBI
mRatBN7.23143,978,073 - 144,004,489 (-)NCBI
RefSeq Acc Id: XM_039104159   ⟹   XP_038960087
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,461,390 (-)NCBI
mRatBN7.23143,978,079 - 144,000,930 (-)NCBI
RefSeq Acc Id: XM_039104160   ⟹   XP_038960088
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,464,059 (-)NCBI
mRatBN7.23143,978,079 - 144,004,597 (-)NCBI
RefSeq Acc Id: XM_039104162   ⟹   XP_038960090
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,453,045 (-)NCBI
mRatBN7.23143,978,073 - 143,992,885 (-)NCBI
RefSeq Acc Id: XM_063283023   ⟹   XP_063139093
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,438,240 - 164,461,409 (-)NCBI
RefSeq Acc Id: NP_569107   ⟸   NM_130423
- UniProtKB: Q99MZ4 (UniProtKB/Swiss-Prot),   A6KI40 (UniProtKB/TrEMBL),   A6KI39 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008760522   ⟸   XM_008762300
- Peptide Label: isoform X4
- UniProtKB: A6KI39 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000025315   ⟸   ENSRNOT00000025315
RefSeq Acc Id: XP_038960086   ⟸   XM_039104158
- Peptide Label: isoform X6
- UniProtKB: Q99MZ4 (UniProtKB/Swiss-Prot),   A6KI40 (UniProtKB/TrEMBL),   A6KI39 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960090   ⟸   XM_039104162
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038960088   ⟸   XM_039104160
- Peptide Label: isoform X9
- UniProtKB: A6KI39 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960084   ⟸   XM_039104156
- Peptide Label: isoform X3
- UniProtKB: A0A8I6A1D7 (UniProtKB/TrEMBL),   A6KI39 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960082   ⟸   XM_039104154
- Peptide Label: isoform X1
- UniProtKB: A6KI39 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960085   ⟸   XM_039104157
- Peptide Label: isoform X5
- UniProtKB: A6KI39 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960083   ⟸   XM_039104155
- Peptide Label: isoform X2
- UniProtKB: A6KI39 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960087   ⟸   XM_039104159
- Peptide Label: isoform X7
- UniProtKB: A6KI39 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000084236   ⟸   ENSRNOT00000110295
Ensembl Acc Id: ENSRNOP00000085996   ⟸   ENSRNOT00000103394
RefSeq Acc Id: XP_063139093   ⟸   XM_063283023
- Peptide Label: isoform X8
- UniProtKB: A0A8I5ZYT2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000101168   ⟸   ENSRNOT00000161417

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99MZ4-F1-model_v2 AlphaFold Q99MZ4 1-662 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:619870 AgrOrtholog
BioCyc Gene G2FUF-47131 BioCyc
Ensembl Genes ENSRNOG00000018441 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000025315 ENTREZGENE
  ENSRNOT00000025315.6 UniProtKB/Swiss-Prot
  ENSRNOT00000103394 ENTREZGENE
  ENSRNOT00000110295 ENTREZGENE
  ENSRNOT00000161417 ENTREZGENE
Gene3D-CATH 1.10.246.130 UniProtKB/Swiss-Prot
  3.60.20.40 UniProtKB/Swiss-Prot
InterPro GGT_lsub_C UniProtKB/Swiss-Prot
  GGT_peptidase UniProtKB/Swiss-Prot
  GGT_ssub UniProtKB/Swiss-Prot
  Ntn_hydrolases_N UniProtKB/Swiss-Prot
KEGG Report rno:156275 UniProtKB/Swiss-Prot
NCBI Gene 156275 ENTREZGENE
PANTHER GLUTATHIONE HYDROLASE 7 UniProtKB/Swiss-Prot
  PTHR11686 UniProtKB/Swiss-Prot
Pfam G_glu_transpept UniProtKB/Swiss-Prot
PhenoGen Ggt7 PhenoGen
PRINTS GGTRANSPTASE UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000018441 RatGTEx
Superfamily-SCOP SSF56235 UniProtKB/Swiss-Prot
UniProt A0A8I5ZYT2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A1D7 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LIY6_RAT UniProtKB/TrEMBL
  A6KI39 ENTREZGENE, UniProtKB/TrEMBL
  A6KI40 ENTREZGENE, UniProtKB/TrEMBL
  GGT7_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-31 Ggt7  gamma-glutamyltransferase 7  Ggtl3  gamma-glutamyltransferase-like 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-02-26 Ggtl3  gamma-glutamyltransferase-like 3      Symbol and Name status set to approved 625702 APPROVED
2002-08-07 Ggtl3  gamma-glutamyltransferase-like 3      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression mRNA expressed only in brain 632759
gene_protein 641 amino acids; 78 kDa 632759