Zranb2 (zinc finger RANBP2-type containing 2) - Rat Genome Database

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Gene: Zranb2 (zinc finger RANBP2-type containing 2) Rattus norvegicus
Analyze
Symbol: Zranb2
Name: zinc finger RANBP2-type containing 2
RGD ID: 61854
Description: Predicted to enable lipopolysaccharide binding activity. Predicted to be involved in RNA splicing and mRNA processing. Predicted to be located in nucleus. Orthologous to human ZRANB2 (zinc finger RANBP2-type containing 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Zfp265; zinc finger protein 265; zinc finger Ran-binding domain-containing protein 2; zinc finger, RAN-binding domain containing 2; zinc finger, splicing; Zis; Znf265
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82249,232,010 - 249,245,786 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2249,232,010 - 249,245,780 (+)EnsemblGRCr8
mRatBN7.22246,573,110 - 246,586,942 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2246,573,166 - 246,586,942 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2254,284,358 - 254,298,122 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02252,178,174 - 252,191,940 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02247,158,249 - 247,171,996 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02263,864,088 - 263,877,872 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2263,864,331 - 263,877,821 (+)Ensemblrn6Rnor6.0
Rnor_5.02282,777,940 - 282,791,430 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42255,645,572 - 255,659,078 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2238,381,066 - 238,394,555 (+)NCBICelera
RGSC_v3.12255,660,178 - 255,673,685 (+)NCBI
Cytogenetic Map2q45NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-sulfonyldiphenol  (ISO)
aflatoxin B1  (ISO)
ammonium chloride  (EXP)
antimycin A  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
azoxystrobin  (EXP)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Brodifacoum  (EXP)
cadmium dichloride  (ISO)
caffeine  (ISO)
chlorpyrifos  (EXP)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
coumarin  (ISO)
crocidolite asbestos  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
deoxynivalenol  (ISO)
dicrotophos  (ISO)
disodium selenite  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP)
endosulfan  (EXP)
ethanol  (ISO)
fenpyroximate  (ISO)
flutamide  (EXP)
FR900359  (ISO)
gentamycin  (EXP)
glyphosate  (EXP)
gold atom  (ISO)
gold(0)  (ISO)
GSK-J4  (ISO)
hexadecanoic acid  (ISO)
imidacloprid  (EXP)
ivermectin  (ISO)
leflunomide  (EXP,ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methapyrilene  (EXP)
oxaliplatin  (EXP)
paclitaxel  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
pirinixic acid  (EXP,ISO)
pyrimidifen  (ISO)
rac-lactic acid  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
sevoflurane  (ISO)
sodium arsenite  (ISO)
tebufenpyrad  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
thiabendazole  (EXP)
topotecan  (EXP)
trichloroethene  (EXP,ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
valproic acid  (EXP)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (IEA,ISO)
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Zis: a developmentally regulated gene expressed in juxtaglomerular cells. Karginova EA, etal., Am J Physiol 1997 Nov;273(5 Pt 2):F731-8.
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Proteomics profiling of nuclear proteins for kidney fibroblasts suggests hypoxia, meiosis, and cancer may meet in the nucleus. Shakib K, etal., Proteomics. 2005 Jul;5(11):2819-38.
Additional References at PubMed
PMID:12477932   PMID:19567205   PMID:22658674   PMID:22681889   PMID:25931508  


Genomics

Comparative Map Data
Zranb2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82249,232,010 - 249,245,786 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2249,232,010 - 249,245,780 (+)EnsemblGRCr8
mRatBN7.22246,573,110 - 246,586,942 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2246,573,166 - 246,586,942 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2254,284,358 - 254,298,122 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02252,178,174 - 252,191,940 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02247,158,249 - 247,171,996 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02263,864,088 - 263,877,872 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2263,864,331 - 263,877,821 (+)Ensemblrn6Rnor6.0
Rnor_5.02282,777,940 - 282,791,430 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42255,645,572 - 255,659,078 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2238,381,066 - 238,394,555 (+)NCBICelera
RGSC_v3.12255,660,178 - 255,673,685 (+)NCBI
Cytogenetic Map2q45NCBI
ZRANB2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38171,063,291 - 71,081,035 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl171,063,251 - 71,081,289 (-)Ensemblhg38GRCh38
GRCh37171,528,974 - 71,546,718 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36171,301,562 - 71,319,333 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34171,240,995 - 71,258,766NCBI
Celera169,818,209 - 69,836,213 (-)NCBICelera
Cytogenetic Map1p31.1NCBI
HuRef169,639,242 - 69,657,246 (-)NCBIHuRef
CHM1_1171,644,323 - 71,662,327 (-)NCBICHM1_1
T2T-CHM13v2.0170,941,292 - 70,959,042 (-)NCBIT2T-CHM13v2.0
Zranb2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393157,239,749 - 157,254,029 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3157,239,797 - 157,254,047 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm383157,534,120 - 157,548,390 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3157,534,160 - 157,548,410 (+)Ensemblmm10GRCm38
MGSCv373157,197,361 - 157,211,303 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv363157,469,690 - 157,483,632 (+)NCBIMGSCv36mm8
Celera3164,002,403 - 164,016,347 (+)NCBICelera
Cytogenetic Map3H4NCBI
cM Map381.29NCBI
Zranb2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542321,069,331 - 21,083,383 (+)Ensembl
ChiLan1.0NW_00495542321,069,821 - 21,091,864 (+)NCBIChiLan1.0ChiLan1.0
ZRANB2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21155,804,313 - 155,822,347 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11154,962,894 - 154,980,934 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0170,286,898 - 70,304,696 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1172,269,501 - 72,287,501 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl172,269,501 - 72,287,501 (-)EnsemblpanPan2panpan1.1
ZRANB2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1674,870,825 - 74,886,143 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl674,870,882 - 74,884,453 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha677,542,462 - 77,561,330 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0675,457,839 - 75,476,712 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl675,457,627 - 75,476,703 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1675,009,528 - 75,028,414 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0674,907,108 - 74,925,965 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0675,404,015 - 75,422,875 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Zranb2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505883,320,633 - 83,339,618 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365911,149,915 - 1,169,869 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365911,150,118 - 1,167,108 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZRANB2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6141,927,495 - 141,947,764 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.16141,927,233 - 141,947,766 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26131,542,725 - 131,563,408 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZRANB2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12062,056,901 - 62,075,339 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603355,596,270 - 55,614,724 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zranb2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474225,152,304 - 25,167,209 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474225,152,876 - 25,167,209 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Zranb2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v134,052,797 - 4,066,649 (-)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:223
Count of miRNA genes:146
Interacting mature miRNAs:183
Transcripts:ENSRNOT00000055259
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631501Bp101Blood pressure QTL 1012.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2205135267250135267Rat
2307174Activ3Activity QTL 34.830.000058locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2210956252251712708Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2143344967251712708Rat
1298075Scl17Serum cholesterol level QTL 173.4blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)2214404877251712708Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2143344967251712708Rat
2293833Kiddil8Kidney dilation QTL 82.9kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2220274283249795005Rat
1300126Bp175Blood pressure QTL 1753.46arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2204795005249795005Rat
7207490Bss111Bone structure and strength QTL 1116.4femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)2214404877251712708Rat
7207484Bss108Bone structure and strength QTL 1085.3femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)2214404877251712708Rat
2313073Bmd75Bone mineral density QTL 754.10.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)2218051934251712708Rat
7207482Bss107Bone structure and strength QTL 1077femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)2214404877251712708Rat
2293844Kiddil7Kidney dilation QTL 73.5kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2220274283249795005Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2151869660251712708Rat
2317752Glom23Glomerulus QTL 233.6urine protein amount (VT:0005160)urine protein level (CMO:0000591)2196140964251540988Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2205135267250135267Rat
1549836Bss2Bone structure and strength QTL 27.5femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)2214404877251712708Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)2205135267250135267Rat

Markers in Region
RH129517  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22246,586,599 - 246,586,808 (+)MAPPERmRatBN7.2
Rnor_6.02263,877,553 - 263,877,761NCBIRnor6.0
Rnor_5.02282,778,000 - 282,778,208UniSTSRnor5.0
RGSC_v3.42255,658,810 - 255,659,018UniSTSRGSC3.4
Celera2238,394,287 - 238,394,495UniSTS
RH 3.4 Map21625.9UniSTS
Cytogenetic Map2q45UniSTS
RH136013  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22246,586,331 - 246,586,570 (+)MAPPERmRatBN7.2
Rnor_6.02263,877,285 - 263,877,523NCBIRnor6.0
Rnor_5.02282,778,238 - 282,778,476UniSTSRnor5.0
RGSC_v3.42255,658,542 - 255,658,780UniSTSRGSC3.4
Celera2238,394,019 - 238,394,257UniSTS
Cytogenetic Map2q45UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000055259   ⟹   ENSRNOP00000052134
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2249,232,197 - 249,245,766 (+)Ensembl
mRatBN7.2 Ensembl2246,573,368 - 246,586,866 (+)Ensembl
Rnor_6.0 Ensembl2263,864,331 - 263,877,821 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000095585   ⟹   ENSRNOP00000090256
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2249,232,180 - 249,245,712 (+)Ensembl
mRatBN7.2 Ensembl2246,579,841 - 246,585,329 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000098797   ⟹   ENSRNOP00000093503
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2249,232,197 - 249,245,780 (+)Ensembl
mRatBN7.2 Ensembl2246,573,166 - 246,586,942 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110717   ⟹   ENSRNOP00000097422
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2249,232,010 - 249,244,129 (+)Ensembl
mRatBN7.2 Ensembl2246,573,166 - 246,586,942 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000157541   ⟹   ENSRNOP00000107891
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2249,232,180 - 249,245,712 (+)Ensembl
RefSeq Acc Id: NM_031616   ⟹   NP_113804
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82249,232,010 - 249,245,786 (+)NCBI
mRatBN7.22246,573,166 - 246,586,942 (+)NCBI
Rnor_6.02263,864,331 - 263,877,821 (+)NCBI
Rnor_5.02282,777,940 - 282,791,430 (-)NCBI
RGSC_v3.42255,645,572 - 255,659,078 (+)RGD
Celera2238,381,066 - 238,394,555 (+)RGD
Sequence:
RefSeq Acc Id: NP_113804   ⟸   NM_031616
- UniProtKB: O35986 (UniProtKB/Swiss-Prot),   A1A4C8 (UniProtKB/Swiss-Prot),   A6HWS3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000052134   ⟸   ENSRNOT00000055259
Ensembl Acc Id: ENSRNOP00000090256   ⟸   ENSRNOT00000095585
Ensembl Acc Id: ENSRNOP00000097422   ⟸   ENSRNOT00000110717
Ensembl Acc Id: ENSRNOP00000093503   ⟸   ENSRNOT00000098797
Ensembl Acc Id: ENSRNOP00000107891   ⟸   ENSRNOT00000157541
Protein Domains
RanBP2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35986-F1-model_v2 AlphaFold O35986 1-330 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13691836
Promoter ID:EPDNEW_R2361
Type:initiation region
Name:Zranb2_1
Description:zinc finger RANBP2-type containing 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02263,864,305 - 263,864,365EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:61854 AgrOrtholog
BioCyc Gene G2FUF-50719 BioCyc
Ensembl Genes ENSRNOG00000009990 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000098797.1 UniProtKB/Swiss-Prot
  ENSRNOT00000157541 ENTREZGENE
Gene3D-CATH Zinc finger, RanBP2-type UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7189430 IMAGE-MGC_LOAD
InterPro UCP037956_Znf_RanB2 UniProtKB/Swiss-Prot
  Znf_RanBP2 UniProtKB/Swiss-Prot
  Znf_RanBP2_sf UniProtKB/Swiss-Prot
KEGG Report rno:58821 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93352 IMAGE-MGC_LOAD
NCBI Gene 58821 ENTREZGENE
PANTHER ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 UniProtKB/Swiss-Prot
  ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED UniProtKB/Swiss-Prot
Pfam zf-RanBP UniProtKB/Swiss-Prot
PhenoGen Zranb2 PhenoGen
PIRSF UCP037956_ZnF_Ran UniProtKB/Swiss-Prot
PROSITE ZF_RANBP2_1 UniProtKB/Swiss-Prot
  ZF_RANBP2_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000009990 RatGTEx
SMART ZnF_RBZ UniProtKB/Swiss-Prot
Superfamily-SCOP SSF90209 UniProtKB/Swiss-Prot
UniProt A0A0H2UHZ4_RAT UniProtKB/TrEMBL
  A0A8I6AAE2_RAT UniProtKB/TrEMBL
  A0A8I6ASM5_RAT UniProtKB/TrEMBL
  A1A4C8 ENTREZGENE
  A6HWS3 ENTREZGENE, UniProtKB/TrEMBL
  A6HWS4_RAT UniProtKB/TrEMBL
  O35986 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A1A4C8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-17 Zranb2  zinc finger RANBP2-type containing 2  Zranb2  zinc finger, RAN-binding domain containing 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-18 Zranb2  zinc finger, RAN-binding domain containing 2  Zfp265  zinc finger protein 265  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Zfp265  zinc finger protein 265  Znf265    Symbol updated 1299863 APPROVED
2002-06-10 Znf265  zinc finger protein 265      Name updated 70584 APPROVED
2001-10-24 Znf265  zinc finger protein 265      Symbol updated to reflect Human and Mouse nomenclature 68913 APPROVED

RGD Curation Notes
Note Type Note Reference