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Gene: Pter (phosphotriesterase related) Rattus norvegicus

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Symbol:

Pter

Name:

phosphotriesterase related

RGD ID:

61313

Description:

Predicted to enable N-acetyltaurine hydrolase activity. Predicted to be involved in epithelial cell differentiation; regulation of appetite; and taurine metabolic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human PTER (phosphotriesterase related); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

N-acetyltaurine hydrolase; parathion hydrolase-related protein; phosphotriesterase-related protein; resiniferatoxin-binding phosphotriesterase-related protein; resiniferatoxin-binding, phosphotriesterase-related protein; resiniferotoxin-binding phosphotriesterase-related protein; Rpr-1; Rpr1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PTER (phosphotriesterase related)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):	Pter (phosphotriesterase related)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pter (phosphotriesterase related)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PTER (phosphotriesterase related)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PTER (phosphotriesterase related)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pter (phosphotriesterase related)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PTER (phosphotriesterase related)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PTER (phosphotriesterase related)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pter (phosphotriesterase related)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Pter (phosphotriesterase related)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Pter (phosphotriesterase related)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PTER (phosphotriesterase related)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pter (phosphotriesterase related)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG18473	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pter	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	80,967,463 - 81,028,707 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	80,967,477 - 81,030,099 (+)	Ensembl				GRCr8
mRatBN7.2	17	76,058,388 - 76,119,633 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	76,058,503 - 76,119,627 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	79,525,179 - 79,586,323 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	83,360,556 - 83,421,705 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	77,408,476 - 77,469,630 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	80,250,444 - 80,311,987 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	80,250,521 - 80,311,981 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	81,874,552 - 81,937,665 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	87,212,759 - 87,275,527 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	75,429,680 - 75,489,533 (+)	NCBI		Celera
RGSC_v3.1	17	87,223,591 - 87,286,360 (+)	NCBI
Cytogenetic Map	17	q12.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

Liver Neoplasms (ISO)

melanoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,1-dichloroethene (ISO)

1,2-dichloroethane (ISO)

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-tribromophenol (ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,3',5,5'-tetrabromobisphenol A (ISO)

3-chloropropane-1,2-diol (EXP)

3-methylcholanthrene (ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

4-amino-2,6-dinitrotoluene (EXP)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (EXP,ISO)

ammonium chloride (EXP)

amphetamine (EXP)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

carbonyl sulfide (EXP)

chromium(6+) (ISO)

cobalt dichloride (EXP)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (EXP)

fluoxetine (EXP)

flutamide (EXP)

gallic acid (ISO)

gentamycin (EXP)

glycidol (EXP)

ivermectin (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

N-nitrosodimethylamine (EXP)

paracetamol (ISO)

perfluorooctanoic acid (EXP)

pirinixic acid (ISO)

potassium chromate (ISO)

Propiverine (EXP)

resveratrol (ISO)

rotenone (EXP)

sodium arsenite (ISO)

sulforaphane (ISO)

tamoxifen (ISO)

thapsigargin (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

urethane (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

epithelial cell differentiation (IEA,ISO)

regulation of appetite (IEA,ISO,ISS)

taurine metabolic process (IEA,ISO,ISS)

Cellular Component

cytosol (IEA,ISO,ISS)

Molecular Function

hydrolase activity (IEA)

hydrolase activity, acting on ester bonds (IEA)

metal ion binding (IEA)

N-acetyltaurine hydrolase activity (IEA,ISO,ISS)

protein binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Molecular cloning and expression pattern of rpr-1, a resiniferatoxin-binding, phosphotriesterase-related protein, expressed in rat kidney tubules.	Davies JA, etal., FEBS Lett 1997 Jun 30;410(2-3):378-82.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:19056867	PMID:21492153	PMID:21873635	PMID:23376485

Genomics

Comparative Map Data

Pter
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	80,967,463 - 81,028,707 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	80,967,477 - 81,030,099 (+)	Ensembl				GRCr8
mRatBN7.2	17	76,058,388 - 76,119,633 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	76,058,503 - 76,119,627 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	79,525,179 - 79,586,323 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	83,360,556 - 83,421,705 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	77,408,476 - 77,469,630 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	80,250,444 - 80,311,987 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	80,250,521 - 80,311,981 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	81,874,552 - 81,937,665 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	87,212,759 - 87,275,527 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	75,429,680 - 75,489,533 (+)	NCBI		Celera
RGSC_v3.1	17	87,223,591 - 87,286,360 (+)	NCBI
Cytogenetic Map	17	q12.3	NCBI

PTER
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	16,437,010 - 16,519,020 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	16,436,940 - 16,515,220 (+)	Ensembl			hg38	GRCh38
GRCh37	10	16,479,009 - 16,555,744 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	16,518,973 - 16,595,742 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	10	16,518,972 - 16,595,742	NCBI
Celera	10	16,412,177 - 16,488,943 (+)	NCBI		Celera
Cytogenetic Map	10	p13	NCBI
HuRef	10	16,391,882 - 16,468,678 (+)	NCBI		HuRef
CHM1_1	10	16,479,216 - 16,556,010 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	16,455,439 - 16,536,409 (+)	NCBI		T2T-CHM13v2.0

Pter
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	12,928,828 - 13,008,265 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	12,928,852 - 13,008,266 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	12,924,037 - 13,003,454 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	12,924,041 - 13,003,455 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	12,845,668 - 12,925,080 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	12,841,977 - 12,919,466 (+)	NCBI		MGSCv36	mm8
Celera	2	12,835,516 - 12,915,102 (+)	NCBI		Celera
Cytogenetic Map	2	A1	NCBI
cM Map	2	9.63	NCBI

Pter
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	11,293,644 - 11,356,239 (-)	Ensembl
ChiLan1.0	NW_004955429	11,296,833 - 11,356,082 (-)	NCBI	ChiLan1.0	ChiLan1.0

PTER
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	29,279,888 - 29,355,324 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	29,285,245 - 29,360,648 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	16,754,485 - 16,830,379 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	17,029,057 - 17,105,594 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	17,029,057 - 17,105,594 (+)	Ensembl			panPan2	panpan1.1

PTER
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	20,237,673 - 20,377,290 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	20,280,990 - 20,342,390 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	17,342,437 - 17,486,618 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	20,525,511 - 20,669,658 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	20,599,252 - 20,669,605 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	17,732,934 - 17,876,989 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	18,565,867 - 18,709,922 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	19,191,388 - 19,335,574 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Pter
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	17,232,891 - 17,294,019 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936520	10,666,439 - 10,727,591 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936520	10,666,443 - 10,727,562 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PTER
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	45,362,928 - 45,440,215 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	10	45,368,515 - 45,440,294 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	50,075,975 - 50,178,233 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PTER
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	16,382,479 - 16,539,382 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	16,429,776 - 16,457,737 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666051	22,013,107 - 22,171,946 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pter
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624796	11,245,391 - 11,298,947 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624796	11,248,274 - 11,301,801 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Pter
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	30,437,690 - 30,440,277 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Pter
150 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	108
Count of miRNA genes:	77
Interacting mature miRNAs:	94
Transcripts:	ENSRNOT00000023446
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
152023626	Bp403	Blood pressure QTL 403	3.86		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
2301412	Kidm40	Kidney mass QTL 40		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	17	42388164	87388164	Rat
631502	Cm26	Cardiac mass QTL 26	3.71		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	17	70613502	86062352	Rat
1354588	Bvd4	Brain ventricular dilatation QTL 4	5.31	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	17	58194064	87388164	Rat
1354654	Spl7	Serum phospholipid level QTL 7	5.5		blood phospholipid amount (VT:0006084)	blood phospholipid level (CMO:0001169)	17	38031354	83031354	Rat
2317038	Ginf3	Gastrointestinal inflammation QTL 3	2.89	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	17	54829503	93515804	Rat
1598871	Memor5	Memory QTL 5	5.3		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	17	40968017	89341781	Rat
1581512	Cm55	Cardiac mass QTL 55	2.8	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	17	27233445	83975845	Rat
1354629	Scl31	Serum cholesterol level QTL 31	4.1		blood cholesterol amount (VT:0000180)	blood total cholesterol level (CMO:0000051)	17	38031354	83031354	Rat
152025238	Slep14	Serum leptin concentration QTL 14	4.62		blood leptin amount (VT:0005667)		17	24390595	84432719	Rat
1354638	Insul1	Insulin level QTL 1	4.8		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	17	38031354	83031354	Rat
61466	Niddm12	Non-insulin dependent diabetes mellitus QTL 12	3.2	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	17	65154872	93515804	Rat
1354635	Bp245	Blood pressure QTL 245	6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	38031354	83031354	Rat
12904736	Cm121	Cardiac mass QTL 121		0.043	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	17	42388164	87388164	Rat
1300148	Bp192	Blood pressure QTL 192	3.47		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	17	46050126	91050126	Rat
4889894	Eae33	Experimental allergic encephalomyelitis QTL 33	5.2	0.0001	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	17	55604597	93006569	Rat
2324621	Coatc5	Coat color QTL 5			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	17	42654895	87654895	Rat
1354619	Bp242	Blood pressure QTL 242	6.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	37687877	82687877	Rat
1300131	Bp193	Blood pressure QTL 193	3.3		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	68550040	93515804	Rat
7488963	Bp369	Blood pressure QTL 369		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	63697147	82818564	Rat
1300129	Rf25	Renal function QTL 25	3.03		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	17	41062352	86062352	Rat
152023740	Bp406	Blood pressure QTL 406	6.06		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
1354663	Bvd5	Brain ventricular dilatation QTL 5	3.51	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	17	32199534	86201342	Rat
152023737	Bp405	Blood pressure QTL 405	5.06		arterial blood pressure trait (VT:2000000)			24136127	84432719	Rat
152023736	Bp404	Blood pressure QTL 404	3.78		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
724528	Uae4	Urinary albumin excretion QTL 4	4.9	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	17	36045537	81045537	Rat
2302365	Gluco40	Glucose level QTL 40	4.79		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	17	64569820	86954580	Rat

Markers in Region

AI790318

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	76,118,894 - 76,118,981 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	80,311,249 - 80,311,335	NCBI	Rnor6.0
Rnor_5.0	17	81,936,149 - 81,936,235	UniSTS	Rnor5.0
RGSC_v3.4	17	87,274,895 - 87,274,981	UniSTS	RGSC3.4
Celera	17	75,488,795 - 75,488,881	UniSTS
Cytogenetic Map	17	q12.3	UniSTS

BF397013

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	76,059,136 - 76,059,258 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	80,251,155 - 80,251,276	NCBI	Rnor6.0
Rnor_5.0	17	81,875,278 - 81,875,399	UniSTS	Rnor5.0
RGSC_v3.4	17	87,213,393 - 87,213,514	UniSTS	RGSC3.4
Celera	17	75,430,314 - 75,430,435	UniSTS
RH 3.4 Map	17	805.7	UniSTS
Cytogenetic Map	17	q12.3	UniSTS

AA964004

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	17	81,028,078 - 81,028,265 (+)	Marker Load Pipeline
mRatBN7.2	17	76,119,004 - 76,119,191 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	80,311,359 - 80,311,545	NCBI	Rnor6.0
Rnor_5.0	17	81,936,259 - 81,936,445	UniSTS	Rnor5.0
RGSC_v3.4	17	87,275,005 - 87,275,191	UniSTS	RGSC3.4
Celera	17	75,488,905 - 75,489,091	UniSTS
RH 3.4 Map	17	774.9	UniSTS
Cytogenetic Map	17	q12.3	UniSTS

AI233834

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	76,119,589 - 76,119,832 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	80,311,944 - 80,312,186	NCBI	Rnor6.0
Rnor_5.0	17	81,936,844 - 81,937,086	UniSTS	Rnor5.0
Celera	17	75,489,490 - 75,489,732	UniSTS
RH 3.4 Map	17	774.0	UniSTS
Cytogenetic Map	17	q12.3	UniSTS

BM386226

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	76,067,107 - 76,067,294 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	80,259,124 - 80,259,310	NCBI	Rnor6.0
Rnor_5.0	17	81,883,247 - 81,883,433	UniSTS	Rnor5.0
RGSC_v3.4	17	87,221,362 - 87,221,548	UniSTS	RGSC3.4
Celera	17	75,438,283 - 75,438,469	UniSTS
RH 3.4 Map	17	803.6	UniSTS
Cytogenetic Map	17	q12.3	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	87	59	6	351	187	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_022224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254290	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC078833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X99477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000023446 ⟹ ENSRNOP00000023446

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	80,967,477 - 81,030,099 (+)	Ensembl
mRatBN7.2 Ensembl	17	76,058,503 - 76,119,627 (+)	Ensembl
Rnor_6.0 Ensembl	17	80,250,521 - 80,311,981 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104646 ⟹ ENSRNOP00000080220

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	81,003,152 - 81,030,099 (+)	Ensembl
mRatBN7.2 Ensembl	17	76,094,124 - 76,119,627 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148097 ⟹ ENSRNOP00000104743

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	81,004,745 - 81,030,099 (+)	Ensembl

RefSeq Acc Id:

NM_022224 ⟹ NP_071560

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	80,967,576 - 81,028,707 (+)	NCBI
mRatBN7.2	17	76,058,503 - 76,119,633 (+)	NCBI
Rnor_6.0	17	80,250,521 - 80,311,987 (+)	NCBI
Rnor_5.0	17	81,874,552 - 81,937,665 (+)	NCBI
RGSC_v3.4	17	87,212,759 - 87,275,527 (+)	RGD
Celera	17	75,429,680 - 75,489,533 (+)	RGD

Sequence:

show sequence

GGAAGCCCCGGAGCTGGTTAAGTAGCTGTGGACCCGAGCAAATCCCTGAGACACTATCAGGAAT
GTCTTCCTTAAGTGGAAAAGTACAAACAGTTCTGGGCCCCGTAGAACCCAGCCAACTGGGACGC
ACCCTGACCCATGAGCATCTGACGATGGCCTTTGACAGTTTTTATTGCCCACCTCCTCCATGCC
AGGAAGCTGCCTCCAGGGAACCTATCATGATGAAAAATTTATTTTGGATTCAGAAAAATCCTTA
CTCCCATCAAGAGAATCTTCAGTTGAATCAGGAGGTAGAAGCCGTAAGAGAAGAACTGTTGTAT
TTCAAGGCTAAGGGCGGAGGAGCCGTGGTGGAGAACACGACCACTGGACTCAGCAGGGATGTGC
GTACGCTGAAGTGGCTGGCAGAGCAGACTGGAGTCCACATCATAGCTGGTGCTGGGTTTTACGT
AGACGCAACTCACTCTGCAGCAACCAGAGCCATGTCGGTGGAGCAGCTTACAGATGTCCTCATT
AGTGAAATTCTCCATGGAGCTGACGGCACCAGTATCAAGTGTGGAGTTATTGGAGAAATTGGCT
GTTCCTGGCCTTTGACTGACAGCGAGAGAAAGGTACTTCAGGCTACGGCTCACGCCCAAGCTCA
GCTTGGTTGTCCGGTGATCATCCACCCTGGACGGAACCCAGGTGCACCATTCCAGATCATCCGA
GTACTGCAAGAAGCAGGGGCGGACATCTCTAAAACGGTCATGTCCCACCTTGACAGGTCTATAT
TTGATAAGAAAGAGCTGCTGGAGTTTGCTCAACTTGGCTGCTACTTGGAATATGATCTCTTTGG
TACGGAGCTCCTTAATTACCAGCTAAGCCCAGATATTGATATGCCTGATGATAACAAAAGAATT
AGAAGGGTCCGTTTTCTGGTGAACGAAGGCTATGAAGATCGGATTCTCATGGCACACGACATAC
ACACAAAGCATCGACTGATGAAGTACGGAGGTCACGGCTACTCACACATCCTCACCAACGTCGT
TCCTAAGATGCTCCTCAGAGGTCTGACTGAGAGGGTGCTTGATAAGATACTCAGAGAAAACCCT
AAACAATGGCTGACTTTTAAATAGGGTGGCTGTTCATGAACCCAGACCCGGAGGATAAAATTAG
CAGAGGATGGTAGGTGATTTCAGATCTACTGGAGACATGAATCCAAGCTACACAGAACCAGTGA
CTGGTCACTTCCCTCCTATGAGAAGCTGGATAACTACTGGGTTCAAGTGAGTCCCATTGTCTTT
CCTTAATAAAATAAAAATGGAAGAGCGTGTTTCCAAACAATAGTTTAAAGTTACAACCCCTAAG
AGTCATTTTGGATGTCTTCCCCTGCCCCGACTCTGATCAGCACTACTTGAGAAAAATTATAGTT
TCAAGCTAAGTTGCCCCCTTCTGGAGCAATCTAATGTTTCTGGTAATATTGATGATCCTAGTAA
TTATCCTGCTGTTCTTTAATTAATGCTTAATGAATAATATGGCATTTCAAAATCACTTTTGCAA
CAAGGGAAGTTAAATTTTGAGACTTTTTTTTTTCCCAAAGGAGACAGCAATAAAATTACCAATT
CGCAACAATAAAAATATTTTGGAAGGTTAACTATGTGTTTCCCACCTATTTATGTAAACAGAAT
AAATCAATTTTCCTGACTTTGGCTTTCTGGTTTCCATTTTTACTGTTAACTATATTGTGTTTTT
GAAAAAGTCTGTCTAAGAACATGTAACAATAGTGAATTATAAAGAAATGCGATCATAAAAGTAA
AAATATATTACATAATATAGTTTAATGAATCATTACAGTTATTATAACAAAGGCCACAATTTAA
TTAATTCATGTTATAATGCAAAGAAAAAAAGAAATGCTTGCCTTATATATAGTCCCTTTATTTC
ATTTACCTTTTATTTCTTTTTTCCTCAGGCCTAAACAGAGAAAATAATGCTTATTTATCTAAGG
AAAAGGTCAGGTCTATTGGAAATGACAGTCTGTTTGTAAACACCACTCTTTAGAAGAGATCCAG
CCATGAAGTTCTGTGCTAATAAAGCCTTTTCAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006254290 ⟹ XP_006254352

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	80,967,537 - 81,028,302 (+)	NCBI
mRatBN7.2	17	76,091,944 - 76,119,228 (+)	NCBI
Rnor_6.0	17	80,281,241 - 80,311,583 (+)	NCBI
Rnor_5.0	17	81,874,552 - 81,937,665 (+)	NCBI

Sequence:

show sequence

CCATTCATCTTGCCTTCTTCATAAGAGTACCTTTTCAGTTTTCTCACTGAACAGTGGGCTAACA
AGGCAGTTACCACAGTCTCACAATGTTGACCAGGTGGCCCATTTTGTTGGCCCTGGAGTCGGTT
AAAACCCAAGCCACATCCTCCGCCTTACGCCTTTATATAGGTTCCCCCTTTTGCAATATGTCCA
CATTGTCTGTCAACTTTTCAAGTCTAAAGATAATAAAAAGATGAGCTTGTGAGTGGAATCATTC
CCCTCCAGTCACCACAGATGAGCTGTTCATGTGTTCTGTGGGCCACTTTCTTTTGTTTATCTCA
CTTTGAGGAGTTTGCTGGGTTCCATTTATAGTCTTGGGTTTGATAGCGCTTCTTTCTGACTCTT
CCTCCCTCCCCACTTTCTCCCCCACCTCCTGCCCAGGACATGATACCCAGGTCTCATGAAGACA
CAGTGCCTCATACCTGTATTTCAGGGTCTTGAGAGTCTGAGGCAAGAGGATTGCCACGAGTTCA
AGCTAGTGGAGGCTACAGGGCGAGACCTGGTCTCGTAAAACAAAAACAAATTTTCCACAAGGTT
AGAAGTCTTGTTATGTATTTGTTAGGTATCCTGTTGCGCTGGCAAAGAAGGTGACAGAAGCAAT
CTGAAGACTAAGGATTTATTGGGGTTAGGGTGCTACCATCCATCAAGGCAGAAGTGCCTACACG
AGTCACATTGCACCCACAGTAGGAGAAGCAGAGAGAAATGAGTGCTGGTCTTCAGCTAGTTCAT
CCCCGAGCTCTGTCAACCACTGAGCTACCTCTAGCTCTTTTGATTGTTAGTCTAAGACAAAGCC
AGCACTATCTAAGCTGGTCTTGAACTCACACTCTAGCAGAGACAGGGCTTGAACTTACGACCCT
CCCTCTTGCCTCAGCCTCTTTGCCATGCTCTGCTAGAGCTGTCCTTGCTGAAGCATAAGTACCT
GGAATAGAGGAAAGGGAGATGGTGTGGGGAAGATGGACCCTTGGGGTCACCCTTGTCCAGCAGC
TGGATCCATGCTGTTGGAGAGAAGGTGTGTCACGGCTTTGAACCTGTACGTGATGGAAATATTC
AAACAGGCTTTAGAAAAATATTGCATAGTTGTTAAAATATTTTTATCACAAATCAAATGTCAGC
TTTAAGTGCAGTGTTTATAGAGTACCGCTGGACTGTGATGTAACACATAAAAAATAGAAATGTT
GATATATTTGGGCCATTTATTTGCAGAGCATTTTTTTAGTACCAGTGAGTCCAGTTAGAAAGTC
CCATCTGGTCTCCTGCGTTTTTGCCATCTCAACTGGTGTCATTTCAGACCAATGCGCCATCTGA
TTTTTTTCCCACACTAGAGCAAAACCCTCCAGGTCTCTGCAGGGACATGGCCTTGGCTCCATCT
CTTTTCCCTCATCAGTAAAGGTTTATTCATAGAGGAAAGTGAGTGAAATTCAGCAGAGGGTTTC
ATAAAAGGCAATAGACCTTTCACTGTTGTGGGAGAAGTCAGGATAGGGAATTTTAAATCATTTC
AGTAAAACGAAAAGAAGTCAGCTTTCCAATTTGACCGTTATATCTAAGTTGAAGCACTAACAGC
TTCAGTCAGCTCTGAGGCTAGCACACTGGTGTCAGACACAGGGCAAAGTATGATTGTCTGTAGT
GTGCAGAGGATGTGCTTAGGAGTTCCCAAGTGCACAGACGGGGTATCCAGACTTCTCCATGTCC
TCTCTCCTCTGAAATTCCTGTGAAGGCAACTGTGTCTATTACATTTCTCACCAATGTGGCAAAA
TATGACAAAAGCCACCAGGAAGGGGAAGCCTTTGTTTTGACACGTTTCAGAGAATTCAAACCAC
ATTGTCCACAGCATTACTAATTTGACTCCAAGGTAATGCTAAACTCCACAGCAGAGGAAAAATG
TGCTGTTCATCTTATTGTGGTCTGGAAAAAGAGAGAGAGAGTTGTGGGAAGGGGCCAGGCTATG
CTATGGCCTCTAAGACCATGTAGCCAGTAACCTGTTTCGTCCGTGTTGGCCCCGCCCATACCAA
CTCCCTCAAATACCATCATTTATGGATCCTTCTGGGACTAATCTGTTCACTGGGCCAGAGTCAT
TATGCTCAAATTATCTCTGGAAATTTCCTCACAGACACACCCAGGTGTGTGATTTACCAATATC
CTAGGTGCTTCAAAGTCCAATTAAGTTGATAAATTAACCATCAGAGTAACTGGAAAGAATATTC
AACTTAAGTAGACAGAACACTCTTAATCATAATGGCCAGACCAAAATAACTCTCAAAACTCAAG
TAAAATCAAAGGGACAACTAGACTTTTCCTCCTCACCAGATCATCAGTCATCACACAAAATTGT
TTTATAAGTCTTATAAAAGATAATATACACATATGTTTGTAAGTAATCAAATCCCGTTTCTTGT
CTCCAGTTTTCAGCTGTGTAGTATAACAGTGTTGTTTCATTCTCTTTTTGTTTTCATTTTTTAT
TCAGTGTTCTCTTTTTATTCTAAGTCCAGCAAGAGTAGAGGAGATGGCAGACACAGTGGCTTAT
ATCTGTATTTCAGACTCTTGGGAGTCTGTGGCAGGAGGATCTCCAGGAGTTCAAGCTAGCATAG
GCTACAGAGTGAGAACTGGTCTCACAGAACAAAAGCAAATTTTTTAAAAGGTTAGAAGTGTTAT
GTGTTTGTTACTTGTCCTGTTGCTCTTGCAAAGACTGTGACAGAAGCCATCTGAGGAGTAAGGA
TTTATTGGGGTTAGGGTGATACTGTCCATCAAAGGAGAAGTACCCTCACGGGTCACATTGCACC
CACAGTAGAGAGGCAGAGAAAACCCGAGTACCAGTGTTCAAATAGATTTTTTTCTTATTTATTC
CATGTGTTATCCCAGCCCGTGGGATGTTCCTGCCCACTTTTGGGTTTGTCTATCTAGGTGATCC
TTCAGTCACATGCCCAGAAGCTTGACCCTTCCATGATTCCAGATCTCCGAGTTGAAGATTAACT
ACAACCGGCTGGTAGTTCTAGCTGGGCTGCTGTAATAGTTACAGAGTATCCTTTCACCGGATGC
AGACTTTACAGTTGATATGAACAACGCTTTTGTCAAATGTGTCCATAGCTCCTGCTATCCTTGT
CCAATACGGGTTCAATAATGAATTTTCTACAGGGAGCTCTGGAAAATGCTGGAAGCCTGTTCCT
CACCCTCTGCACAGACTGGAACTGCCACTCACATCCTTTGTCATTGCGGCCTCTACATGCGGTC
CTTATCATGAAGGACACAAGAACCTTCTGCCTAGAGCAAATCCCTGAGACACTATCAGGAATGT
CTTCCTTAAGTGGAAAAGTACAAACAGTTCTGGGCCCCGTAGAACCCAGCCAACTGGGACGCAC
CCTGACCCATGAGCATCTGACGATGGCCTTTGACAGTTTTTATTGCCCACCTCCTCCATGCCAG
GAAGCTGCCTCCAGGGAACCTATCATGATGAAAAATTTATTTTGGATTCAGAAAAATCCTTACT
CCCATCAAGAGAATCTTCAGTTGAATCAGGAGGTAGAAGCCGTAAGAGAAGAACTGTTGTATTT
CAAGGCTAAGGGCGGAGGAGCCGTGGTGGAGAACACGACCACTGGACTCAGCAGGGATGTGCGT
ACGCTGAAGTGGCTGGCAGAGCAGACTGGAGTCCACATCATAGCTGGTGCTGGGTTTTACGTAG
ACGCAACTCACTCTGCAGCAACCAGAGCCATGTCGGTGGAGCAGCTTACAGATGTCCTCATTAG
TGAAATTCTCCATGGAGCTGACGGCACCAGTATCAAGTGTGGAGTTATTGGAGAAATTGGCTGT
TCCTGGCCTTTGACTGACAGCGAGAGAAAGGTACTTCAGGCTACGGCTCACGCCCAAGCTCAGC
TTGGTTGTCCGGTGATCATCCACCCTGGACGGAACCCAGGTGCACCATTCCAGATCATCCGAGT
ACTGCAAGAAGCAGGGGCGGACATCTCTAAAACGGTCATGTCCCACCTTGACAGGTCTATATTT
GATAAGAAAGAGCTGCTGGAGTTTGCTCAACTTGGCTGCTACTTGGAATATGATCTCTTTGGTA
CGGAGCTCCTTAATTACCAGCTAAGCCCAGATATTGATATGCCTGATGATAACAAAAGAATTAG
AAGGGTCCGTTTTCTGGTGAACGAAGGCTATGAAGATCGGATTCTCATGGCACACGACATACAC
ACAAAGCATCGACTGATGAAGTACGGAGGTCACGGCTACTCACACATCCTCACCAACGTCGTTC
CTAAGATGCTCCTCAGAGGTCTGACTGAGAGGGTGCTTGATAAGATACTCAGAGAAAACCCTAA
ACAATGGCTGACTTTTAAATAGGGTGGCTGTTCATGAACCCAGACCCGGAGGATAAAATTAGCA
GAGGATGGTAGGTGATTTCAGATCTACTGGAGACATGAATCCAAGCTACACAGAACCAGTGACT
GGTCACTTCCCTCCTATGAGAAGCTGGATAACTACTGGGTTCAAGTGAGTCCCATTGTCTTTCC
TTAATAAAATAAAAATGGAAGAGCGTGTTTCCAAACAATAGTTTAAAGTTACAACCCCTAAGAG
TCATTTTGGATGTCTTCCCCTGCCCCGACTCTGATCAGCACTACTTGAGAAAAATTATAGTTTC
AAGCTAAGTTGCCCCCTTCTGGAGCAATCTAATGTTTCTGGTAATATTGATGATCCTAGTAATT
ATCCTGCTGTTCTTTAATTAATGCTTAATGAATAATATGGCATTTCAAAATCACTTTTGCAACA
AGGGAAGTTAAATTTTGAGACTTTTTTTTTTCCCAAAGGAGACAGCAATAAAATTACCAATTCG
CAACAATAAAAATATTTTGGAAGGTTAACTATGTGTTTCCCACCTATTTATGTAAACAGAATAA
ATCAATTTTCCTGAC

hide sequence

RefSeq Acc Id:

XM_006254291 ⟹ XP_006254353

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	80,967,463 - 81,028,302 (+)	NCBI
mRatBN7.2	17	76,058,388 - 76,119,228 (+)	NCBI
Rnor_6.0	17	80,250,444 - 80,311,583 (+)	NCBI
Rnor_5.0	17	81,874,552 - 81,937,665 (+)	NCBI

Sequence:

show sequence

TAGAAGAGAAGACATCTTGCTCTCCCCGACCTTGCTCAAGTTCCCTGGGGAGAAGGCGGCGCAC
GGCGCGGGAGGAAGGAAGCCCCGGAGCTGGTTAAGTAGCTGTGGACCCGGTAGGAAAGAGCAAA
TCCCTGAGACACTATCAGGAATGTCTTCCTTAAGTGGAAAAGTACAAACAGTTCTGGGCCCCGT
AGAACCCAGCCAACTGGGACGCACCCTGACCCATGAGCATCTGACGATGGCCTTTGACAGTTTT
TATTGCCCACCTCCTCCATGCCAGGAAGCTGCCTCCAGGGAACCTATCATGATGAAAAATTTAT
TTTGGATTCAGAAAAATCCTTACTCCCATCAAGAGAATCTTCAGTTGAATCAGGAGGTAGAAGC
CGTAAGAGAAGAACTGTTGTATTTCAAGGCTAAGGGCGGAGGAGCCGTGGTGGAGAACACGACC
ACTGGACTCAGCAGGGATGTGCGTACGCTGAAGTGGCTGGCAGAGCAGACTGGAGTCCACATCA
TAGCTGGTGCTGGGTTTTACGTAGACGCAACTCACTCTGCAGCAACCAGAGCCATGTCGGTGGA
GCAGCTTACAGATGTCCTCATTAGTGAAATTCTCCATGGAGCTGACGGCACCAGTATCAAGTGT
GGAGTTATTGGAGAAATTGGCTGTTCCTGGCCTTTGACTGACAGCGAGAGAAAGGTACTTCAGG
CTACGGCTCACGCCCAAGCTCAGCTTGGTTGTCCGGTGATCATCCACCCTGGACGGAACCCAGG
TGCACCATTCCAGATCATCCGAGTACTGCAAGAAGCAGGGGCGGACATCTCTAAAACGGTCATG
TCCCACCTTGACAGGTCTATATTTGATAAGAAAGAGCTGCTGGAGTTTGCTCAACTTGGCTGCT
ACTTGGAATATGATCTCTTTGGTACGGAGCTCCTTAATTACCAGCTAAGCCCAGATATTGATAT
GCCTGATGATAACAAAAGAATTAGAAGGGTCCGTTTTCTGGTGAACGAAGGCTATGAAGATCGG
ATTCTCATGGCACACGACATACACACAAAGCATCGACTGATGAAGTACGGAGGTCACGGCTACT
CACACATCCTCACCAACGTCGTTCCTAAGATGCTCCTCAGAGGTCTGACTGAGAGGGTGCTTGA
TAAGATACTCAGAGAAAACCCTAAACAATGGCTGACTTTTAAATAGGGTGGCTGTTCATGAACC
CAGACCCGGAGGATAAAATTAGCAGAGGATGGTAGGTGATTTCAGATCTACTGGAGACATGAAT
CCAAGCTACACAGAACCAGTGACTGGTCACTTCCCTCCTATGAGAAGCTGGATAACTACTGGGT
TCAAGTGAGTCCCATTGTCTTTCCTTAATAAAATAAAAATGGAAGAGCGTGTTTCCAAACAATA
GTTTAAAGTTACAACCCCTAAGAGTCATTTTGGATGTCTTCCCCTGCCCCGACTCTGATCAGCA
CTACTTGAGAAAAATTATAGTTTCAAGCTAAGTTGCCCCCTTCTGGAGCAATCTAATGTTTCTG
GTAATATTGATGATCCTAGTAATTATCCTGCTGTTCTTTAATTAATGCTTAATGAATAATATGG
CATTTCAAAATCACTTTTGCAACAAGGGAAGTTAAATTTTGAGACTTTTTTTTTTCCCAAAGGA
GACAGCAATAAAATTACCAATTCGCAACAATAAAAATATTTTGGAAGGTTAACTATGTGTTTCC
CACCTATTTATGTAAACAGAATAAATCAATTTTCCTGAC

hide sequence

RefSeq Acc Id:

XM_039096043 ⟹ XP_038951971

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	80,967,485 - 81,028,302 (+)	NCBI
mRatBN7.2	17	76,058,399 - 76,119,178 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_071560	(Get FASTA)	NCBI Sequence Viewer
	XP_006254352	(Get FASTA)	NCBI Sequence Viewer
	XP_006254353	(Get FASTA)	NCBI Sequence Viewer
	XP_038951971	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH78833	(Get FASTA)	NCBI Sequence Viewer
	CAA67840	(Get FASTA)	NCBI Sequence Viewer
	EDL78710	(Get FASTA)	NCBI Sequence Viewer
	EDL78711	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000023446
	ENSRNOP00000023446.2
	ENSRNOP00000104743
GenBank Protein	Q63530	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_071560 ⟸ NM_022224

- UniProtKB:

Q6AYY7 (UniProtKB/Swiss-Prot), Q63530 (UniProtKB/Swiss-Prot), A6JM34 (UniProtKB/TrEMBL), A0A8I5ZP46 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSLSGKVQTVLGPVEPSQLGRTLTHEHLTMAFDSFYCPPPPCQEAASREPIMMKNLFWIQKNP
YSHQENLQLNQEVEAVREELLYFKAKGGGAVVENTTTGLSRDVRTLKWLAEQTGVHIIAGAGFY
VDATHSAATRAMSVEQLTDVLISEILHGADGTSIKCGVIGEIGCSWPLTDSERKVLQATAHAQA
QLGCPVIIHPGRNPGAPFQIIRVLQEAGADISKTVMSHLDRSIFDKKELLEFAQLGCYLEYDLF
GTELLNYQLSPDIDMPDDNKRIRRVRFLVNEGYEDRILMAHDIHTKHRLMKYGGHGYSHILTNV
VPKMLLRGLTERVLDKILRENPKQWLTFK

hide sequence

RefSeq Acc Id:	XP_006254353 ⟸ XM_006254291
- Peptide Label:	isoform X3
- UniProtKB:	Q6AYY7 (UniProtKB/Swiss-Prot), Q63530 (UniProtKB/Swiss-Prot), A6JM34 (UniProtKB/TrEMBL), A0A8I5ZP46 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSLSGKVQTVLGPVEPSQLGRTLTHEHLTMAFDSFYCPPPPCQEAASREPIMMKNLFWIQKNP YSHQENLQLNQEVEAVREELLYFKAKGGGAVVENTTTGLSRDVRTLKWLAEQTGVHIIAGAGFY VDATHSAATRAMSVEQLTDVLISEILHGADGTSIKCGVIGEIGCSWPLTDSERKVLQATAHAQA QLGCPVIIHPGRNPGAPFQIIRVLQEAGADISKTVMSHLDRSIFDKKELLEFAQLGCYLEYDLF GTELLNYQLSPDIDMPDDNKRIRRVRFLVNEGYEDRILMAHDIHTKHRLMKYGGHGYSHILTNV VPKMLLRGLTERVLDKILRENPKQWLTFK hide sequence

RefSeq Acc Id:	XP_006254352 ⟸ XM_006254290
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZP46 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNFLQGALENAGSLFLTLCTDWNCHSHPLSLRPLHAVLIMKDTRTFCLEQIPETLSGMSSLSGK VQTVLGPVEPSQLGRTLTHEHLTMAFDSFYCPPPPCQEAASREPIMMKNLFWIQKNPYSHQENL QLNQEVEAVREELLYFKAKGGGAVVENTTTGLSRDVRTLKWLAEQTGVHIIAGAGFYVDATHSA ATRAMSVEQLTDVLISEILHGADGTSIKCGVIGEIGCSWPLTDSERKVLQATAHAQAQLGCPVI IHPGRNPGAPFQIIRVLQEAGADISKTVMSHLDRSIFDKKELLEFAQLGCYLEYDLFGTELLNY QLSPDIDMPDDNKRIRRVRFLVNEGYEDRILMAHDIHTKHRLMKYGGHGYSHILTNVVPKMLLR GLTERVLDKILRENPKQWLTFK hide sequence

Ensembl Acc Id:

ENSRNOP00000023446 ⟸ ENSRNOT00000023446

RefSeq Acc Id:	XP_038951971 ⟸ XM_039096043
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZP46 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000080220 ⟸ ENSRNOT00000104646

Ensembl Acc Id:

ENSRNOP00000104743 ⟸ ENSRNOT00000148097

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q63530-F1-model_v2	AlphaFold	Q63530	1-349	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700592

Promoter ID:

EPDNEW_R11116

Type:

initiation region

Name:

Pter_1

Description:

phosphotriesterase related

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	17	80,250,445 - 80,250,505	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:61313	AgrOrtholog
BioCyc Gene	G2FUF-8614	BioCyc
Ensembl Genes	ENSRNOG00000017328	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000023446	ENTREZGENE
	ENSRNOT00000023446.5	UniProtKB/Swiss-Prot
	ENSRNOT00000148097	ENTREZGENE
Gene3D-CATH	Metal-dependent hydrolases	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7110694	IMAGE-MGC_LOAD
InterPro	AryldialkylPase_Zn-BS	UniProtKB/Swiss-Prot
	Metal_Hydrolase	UniProtKB/Swiss-Prot
	Phosphotriesterase	UniProtKB/Swiss-Prot
KEGG Report	rno:63852	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93452	IMAGE-MGC_LOAD
NCBI Gene	63852	ENTREZGENE
PANTHER	PHOSPHOTRIESTERASE-RELATED PROTEIN	UniProtKB/Swiss-Prot
	PTHR10819	UniProtKB/Swiss-Prot
Pfam	PTE	UniProtKB/Swiss-Prot
PhenoGen	Pter	PhenoGen
PIRSF	PhP	UniProtKB/Swiss-Prot
PROSITE	PHOSPHOTRIESTERASE_1	UniProtKB/Swiss-Prot
	PHOSPHOTRIESTERASE_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000017328	RatGTEx
Superfamily-SCOP	SSF51556	UniProtKB/Swiss-Prot
UniProt	A0A8I5ZP46	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LM77_RAT	UniProtKB/TrEMBL
	A6JM34	ENTREZGENE, UniProtKB/TrEMBL
	PTER_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	Q6AYY7	ENTREZGENE
UniProt Secondary	Q6AYY7	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2003-04-09	Pter	phosphotriesterase related	pter		Name updated	629478	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_homology	has similarity to bacterial phosphotriesterases, which catalyze the hydrolysis of phosphotriester-containing organophosphate pestacides	729511

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD