Odf1 (outer dense fiber of sperm tails 1) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Odf1 (outer dense fiber of sperm tails 1) Rattus norvegicus
Analyze
Symbol: Odf1
Name: outer dense fiber of sperm tails 1
RGD ID: 3228
Description: Enables protein domain specific binding activity. Predicted to be involved in cell differentiation and spermatogenesis. Predicted to be located in manchette and sperm flagellum. Predicted to be active in outer dense fiber. Orthologous to human ODF1 (outer dense fiber of sperm tails 1); INTERACTS WITH ammonium chloride; arsane; arsenic atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: outer dense fiber protein 1; RTS 5/1; Sperm outer dense fiber major protein 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8771,262,270 - 71,274,621 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl771,266,838 - 71,274,620 (+)EnsemblGRCr8
mRatBN7.2769,377,427 - 69,389,662 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl769,380,116 - 69,389,664 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx771,256,626 - 71,264,361 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0773,459,160 - 73,466,895 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0773,327,184 - 73,334,919 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0777,066,580 - 77,074,712 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl777,066,955 - 77,074,711 (+)Ensemblrn6Rnor6.0
Rnor_5.0777,172,716 - 77,180,530 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4773,736,778 - 73,744,536 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera766,445,193 - 66,452,953 (+)NCBICelera
RGSC_v3.1773,757,489 - 73,765,265 (+)NCBI
Cytogenetic Map7q22NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Sequence and developmental expression of a mRNA encoding a putative protein of rat sperm outer dense fibers. Burfeind P and Hoyer-Fender S, Dev Biol 1991 Nov;148(1):195-204.
2. Structure and chromosomal assignment of a gene encoding the major protein of rat sperm outer dense fibres. Burfeind P, etal., Eur J Biochem 1993 Sep 1;216(2):497-505.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. Identity of two rat testis cDNAs. Hoyer-Fender S Dev Biol 1993 Jun;157(2):553.
6. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
7. Molecular cloning and developmental expression of an mRNA encoding the 27 kDa outer dense fiber protein of rat spermatozoa. Morales CR, etal., Mol Reprod Dev 1994 Feb;37(2):229-40.
8. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
9. GOA pipeline RGD automated data pipeline
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. A new rat gene RT7 is specifically expressed during spermatogenesis. van der Hoorn FA, etal., Dev Biol 1990 Nov;142(1):147-54.
12. Novel RING finger protein OIP1 binds to conserved amino acid repeats in sperm tail protein ODF1. Zarsky HA, etal., Biol Reprod 2003 Feb;68(2):543-52.
Additional References at PubMed
PMID:10373309   PMID:12079992   PMID:12477932   PMID:12594206   PMID:15489334   PMID:21630459  


Genomics

Comparative Map Data
Odf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8771,262,270 - 71,274,621 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl771,266,838 - 71,274,620 (+)EnsemblGRCr8
mRatBN7.2769,377,427 - 69,389,662 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl769,380,116 - 69,389,664 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx771,256,626 - 71,264,361 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0773,459,160 - 73,466,895 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0773,327,184 - 73,334,919 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0777,066,580 - 77,074,712 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl777,066,955 - 77,074,711 (+)Ensemblrn6Rnor6.0
Rnor_5.0777,172,716 - 77,180,530 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4773,736,778 - 73,744,536 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera766,445,193 - 66,452,953 (+)NCBICelera
RGSC_v3.1773,757,489 - 73,765,265 (+)NCBI
Cytogenetic Map7q22NCBI
ODF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388102,551,589 - 102,561,018 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8102,551,589 - 102,561,018 (+)Ensemblhg38GRCh38
GRCh378103,563,817 - 103,573,246 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 368103,633,036 - 103,642,422 (+)NCBIBuild 36Build 36hg18NCBI36
Build 348103,633,035 - 103,642,422NCBI
Celera899,751,133 - 99,760,516 (+)NCBICelera
Cytogenetic Map8q22.3NCBI
HuRef898,764,996 - 98,774,369 (+)NCBIHuRef
CHM1_18103,604,099 - 103,613,495 (+)NCBICHM1_1
T2T-CHM13v2.08103,679,879 - 103,689,278 (+)NCBIT2T-CHM13v2.0
Odf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391538,219,447 - 38,226,979 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1538,219,447 - 38,226,979 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381538,219,203 - 38,226,735 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1538,219,203 - 38,226,735 (+)Ensemblmm10GRCm38
MGSCv371538,148,958 - 38,156,490 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361538,163,790 - 38,171,228 (+)NCBIMGSCv36mm8
Celera1538,838,532 - 38,846,058 (+)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1515.14NCBI
Odf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541727,145,542 - 27,150,969 (+)Ensembl
ChiLan1.0NW_00495541727,145,542 - 27,150,910 (+)NCBIChiLan1.0ChiLan1.0
ODF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27119,890,792 - 119,926,164 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1895,426,778 - 95,462,119 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0899,206,018 - 99,216,111 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18101,366,611 - 101,376,030 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8101,366,611 - 101,376,030 (+)EnsemblpanPan2panpan1.1
ODF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1134,137,119 - 4,146,557 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl134,137,257 - 4,146,555 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha134,138,615 - 4,148,054 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0134,297,181 - 4,306,620 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl134,297,316 - 4,306,618 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1134,139,667 - 4,149,104 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0134,252,465 - 4,261,899 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0134,269,671 - 4,279,142 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Odf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530333,642,933 - 33,651,953 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647041,069,033 - 41,078,020 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647041,069,033 - 41,078,020 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ODF1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl434,511,077 - 34,520,609 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1434,511,077 - 34,520,601 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2437,337,182 - 37,346,705 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ODF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1897,394,506 - 97,403,601 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl897,394,673 - 97,403,464 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603943,242,358 - 43,252,510 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Odf1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476319,555,101 - 19,560,333 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476319,554,944 - 19,560,473 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Odf1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11211,676,419 - 211,684,023 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Odf1
135 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:95
Count of miRNA genes:81
Interacting mature miRNAs:85
Transcripts:ENSRNOT00000008700
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74511390390113903Rat
1549840Bss5Bone structure and strength QTL 59.8femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)72663805771638057Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)771103011106126789Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72417947886817926Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)75170064396700643Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)731770293110435881Rat
1298525Cm1Cardiac mass QTL 12.7heart mass (VT:0007028)heart wet weight (CMO:0000069)756625161101625161Rat
631513Scl7Serum cholesterol level QTL 74.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)73984590284845902Rat
10755453Coatc12Coat color QTL 120coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)73299870277998702Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)746307490127866166Rat
7411605Foco14Food consumption QTL 1424.10.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)73617876481178764Rat
1300151Bp181Blood pressure QTL 1813.36arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)755498584105834451Rat
1559283Emca4Estrogen-induced mammary cancer QTL 43.7mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)763889858108889858Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)71011291699900612Rat
738030Anxrr8Anxiety related response QTL 84.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)74847504993475049Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)71104117804Rat
631534Lnnr1Liver neoplastic nodule remodeling QTL 13.850.001liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)73617876481178764Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)740540077123682549Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)749682832115766396Rat
1298528Bp169Blood pressure QTL 1690.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)762963207107963207Rat
1300132Bp182Blood pressure QTL 1823.49arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)72154197786817926Rat
1576303Ept7Estrogen-induced pituitary tumorigenesis QTL 73.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)763889858108889858Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)749682832115766396Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)749682832115766396Rat
2303582Gluco53Glucose level QTL 533blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)74860308793603087Rat
61439Cia8Collagen induced arthritis QTL 85.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)72718291472182914Rat

Markers in Region
ODF1__6103  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2769,389,123 - 69,389,657 (+)MAPPERmRatBN7.2
Rnor_6.0777,074,174 - 77,074,707NCBIRnor6.0
Rnor_5.0777,179,992 - 77,180,525UniSTSRnor5.0
RGSC_v3.4773,743,998 - 73,744,531UniSTSRGSC3.4
Celera766,452,415 - 66,452,948UniSTS
Cytogenetic Map7q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
8 9 11 71 43 44 24 20 24 3 94 43 60 13 52 20 4 4

Sequence


Ensembl Acc Id: ENSRNOT00000008700   ⟹   ENSRNOP00000008700
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl771,266,838 - 71,274,620 (+)Ensembl
mRatBN7.2 Ensembl769,380,116 - 69,389,664 (+)Ensembl
Rnor_6.0 Ensembl777,066,955 - 77,074,711 (+)Ensembl
RefSeq Acc Id: NM_024126   ⟹   NP_077040
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8771,266,864 - 71,274,621 (+)NCBI
mRatBN7.2769,381,903 - 69,389,662 (+)NCBI
Rnor_6.0777,066,955 - 77,074,712 (+)NCBI
Rnor_5.0777,172,716 - 77,180,530 (+)NCBI
RGSC_v3.4773,736,778 - 73,744,536 (+)RGD
Celera766,445,193 - 66,452,953 (+)RGD
Sequence:
RefSeq Acc Id: XM_017594659   ⟹   XP_017450148
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8771,266,449 - 71,274,621 (+)NCBI
mRatBN7.2769,381,884 - 69,389,662 (+)NCBI
Rnor_6.0777,066,580 - 77,074,712 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039078408   ⟹   XP_038934336
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8771,262,270 - 71,274,621 (+)NCBI
mRatBN7.2769,377,427 - 69,389,662 (+)NCBI
RefSeq Acc Id: XM_063262993   ⟹   XP_063119063
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8771,268,334 - 71,274,621 (+)NCBI
RefSeq Acc Id: NP_077040   ⟸   NM_024126
- UniProtKB: Q63534 (UniProtKB/Swiss-Prot),   Q63390 (UniProtKB/Swiss-Prot),   Q62652 (UniProtKB/Swiss-Prot),   Q63535 (UniProtKB/Swiss-Prot),   P21769 (UniProtKB/Swiss-Prot),   A6HR54 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017450148   ⟸   XM_017594659
- Peptide Label: isoform X1
- UniProtKB: A0A8L2UI24 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000008700   ⟸   ENSRNOT00000008700
RefSeq Acc Id: XP_038934336   ⟸   XM_039078408
- Peptide Label: isoform X3
- UniProtKB: A6HR53 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119063   ⟸   XM_063262993
- Peptide Label: isoform X2
Protein Domains
sHSP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P21769-F1-model_v2 AlphaFold P21769 1-245 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695300
Promoter ID:EPDNEW_R5825
Type:initiation region
Name:Odf1_1
Description:outer dense fiber of sperm tails 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0777,066,938 - 77,066,998EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:3228 AgrOrtholog
BioCyc Gene G2FUF-33594 BioCyc
Ensembl Genes ENSRNOG00000006578 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000008700 ENTREZGENE
Gene3D-CATH 2.60.40.790 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7114007 IMAGE-MGC_LOAD
InterPro A-crystallin/Hsp20_dom UniProtKB/Swiss-Prot
  HSP20-like_chaperone UniProtKB/Swiss-Prot
  ODF1_ACD UniProtKB/Swiss-Prot
  ODFP UniProtKB/Swiss-Prot
KEGG Report rno:24610 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93123 IMAGE-MGC_LOAD
NCBI Gene 24610 ENTREZGENE
PANTHER OUTER DENSE FIBER PROTEIN 1 UniProtKB/Swiss-Prot
  PTHR17125 UniProtKB/Swiss-Prot
Pfam HSP20 UniProtKB/Swiss-Prot
PhenoGen Odf1 PhenoGen
RatGTEx ENSRNOG00000006578 RatGTEx
Superfamily-SCOP SSF49764 UniProtKB/Swiss-Prot
UniProt A0A8L2UI24 ENTREZGENE, UniProtKB/TrEMBL
  A6HR53 ENTREZGENE, UniProtKB/TrEMBL
  A6HR54 ENTREZGENE, UniProtKB/TrEMBL
  ODFP1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q62652 ENTREZGENE
  Q63390 ENTREZGENE
  Q63534 ENTREZGENE
  Q63535 ENTREZGENE
UniProt Secondary Q62652 UniProtKB/Swiss-Prot
  Q63390 UniProtKB/Swiss-Prot
  Q63534 UniProtKB/Swiss-Prot
  Q63535 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2001-07-23 Odf1  outer dense fiber of sperm tails 1      Name updated to reflect Human and Mouse nomenclature 67952 APPROVED
2001-07-23 Odf1  Sperm outer dense fiber major protein 1      Name withdrawn 67952 WITHDRAWN

RGD Curation Notes
Note Type Note Reference
gene_protein 244 amino acids 729331