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Gene: C17h10orf67 (similar to human chromosome 10 open reading frame 67) Rattus norvegicus

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Symbol:

C17h10orf67

Name:

similar to human chromosome 10 open reading frame 67

RGD ID:

1598031

Description:

Orthologous to human C10orf67 (chromosome 10 open reading frame 67); INTERACTS WITH aflatoxin B1 (ortholog); arsane (ortholog); arsenic atom (ortholog).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC681241; LOC681241; uncharacterized protein C10orf67 homolog, mitochondrial

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	86,970,801 - 87,082,723 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	86,980,186 - 87,082,700 (-)	Ensembl				GRCr8
mRatBN7.2	17	82,062,461 - 82,174,401 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	82,071,838 - 82,174,353 (-)	Ensembl				mRatBN7.2
Rnor_6.0	17	86,227,106 - 86,322,177 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	86,239,087 - 86,322,144 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	87,915,286 - 88,032,655 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	93,515,546 - 93,620,296 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	81,351,127 - 81,446,290 (-)	NCBI		Celera
Cytogenetic Map	17	q12.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

pancreatic agenesis 2 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

aflatoxin B1 (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

lipopolysaccharide (ISO)

nickel sulfate (ISO)

propanal (ISO)

propofol (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sunitinib (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

C17h10orf67
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	86,970,801 - 87,082,723 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	86,980,186 - 87,082,700 (-)	Ensembl				GRCr8
mRatBN7.2	17	82,062,461 - 82,174,401 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	82,071,838 - 82,174,353 (-)	Ensembl				mRatBN7.2
Rnor_6.0	17	86,227,106 - 86,322,177 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	86,239,087 - 86,322,144 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	87,915,286 - 88,032,655 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	93,515,546 - 93,620,296 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	81,351,127 - 81,446,290 (-)	NCBI		Celera
Cytogenetic Map	17	q12.3	NCBI

C10orf67
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	23,201,916 - 23,344,797 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	23,202,696 - 23,344,845 (-)	Ensembl			hg38	GRCh38
GRCh37	10	23,490,845 - 23,633,726 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	23,645,526 - 23,673,778 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	10	23,645,526 - 23,673,778	NCBI
Celera	10	23,293,123 - 23,322,454 (-)	NCBI		Celera
Cytogenetic Map	10	p12.2	NCBI
HuRef	10	23,265,648 - 23,294,689 (-)	NCBI		HuRef
CHM1_1	10	23,606,039 - 23,634,174 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	23,220,910 - 23,364,923 (-)	NCBI		T2T-CHM13v2.0

4921504E06Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	19,467,648 - 19,558,721 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	19,467,648 - 19,558,725 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	19,462,837 - 19,553,910 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	19,462,837 - 19,553,914 (-)	Ensembl			mm10	GRCm38
MGSCv37	2	19,384,464 - 19,475,537 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	19,380,591 - 19,471,664 (-)	NCBI		MGSCv36	mm8
Celera	2	19,361,899 - 19,453,082 (-)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	13.4	NCBI

LOC102011029
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955429	5,674,076 - 5,798,289 (+)	NCBI	ChiLan1.0	ChiLan1.0

C8H10orf67
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	35,884,421 - 36,040,147 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	35,889,751 - 36,046,368 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	23,366,945 - 23,516,413 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	23,808,475 - 23,889,194 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

C2H10orf67
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	9,864,753 - 10,061,384 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	9,900,035 - 10,067,876 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	8,556,863 - 8,753,198 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	8,067,182 - 8,257,543 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	8,102,265 - 8,256,114 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	7,433,695 - 7,622,939 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	7,517,150 - 7,705,529 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	7,684,439 - 7,874,235 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

CUNH10orf67
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	22,990,835 - 23,123,127 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936520	4,837,373 - 4,950,732 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936520	4,837,373 - 4,968,939 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C10H10orf67
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	51,683,329 - 51,812,646 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	10	51,683,170 - 51,812,140 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	57,337,683 - 57,470,019 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

C9H10orf67
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	22,975,457 - 23,085,011 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666051	28,739,338 - 28,874,524 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

CUNH10orf67
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624796	5,423,959 - 5,466,321 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

C14H10orf67
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	4,504,192 - 4,641,480 (+)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	139
Count of miRNA genes:	107
Interacting mature miRNAs:	115
Transcripts:	ENSRNOT00000034474
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300131	Bp193	Blood pressure QTL 193	3.3		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	68550040	93515804	Rat
12904736	Cm121	Cardiac mass QTL 121		0.043	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	17	42388164	87388164	Rat
2301412	Kidm40	Kidney mass QTL 40		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	17	42388164	87388164	Rat
1300148	Bp192	Blood pressure QTL 192	3.47		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	17	46050126	91050126	Rat
1354588	Bvd4	Brain ventricular dilatation QTL 4	5.31	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	17	58194064	87388164	Rat
61466	Niddm12	Non-insulin dependent diabetes mellitus QTL 12	3.2	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	17	65154872	93515804	Rat
4889894	Eae33	Experimental allergic encephalomyelitis QTL 33	5.2	0.0001	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	17	55604597	93006569	Rat
2317038	Ginf3	Gastrointestinal inflammation QTL 3	2.89	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	17	54829503	93515804	Rat
2324621	Coatc5	Coat color QTL 5			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	17	42654895	87654895	Rat
1598871	Memor5	Memory QTL 5	5.3		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	17	40968017	89341781	Rat

Markers in Region

D17Rat177

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	17	86,995,153 - 86,995,367 (+)	Marker Load Pipeline
mRatBN7.2	17	82,086,813 - 82,087,027 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	86,234,442 - 86,234,655	NCBI	Rnor6.0
Rnor_5.0	17	87,945,994 - 87,946,207	UniSTS	Rnor5.0
RGSC_v3.4	17	93,530,221 - 93,530,435	RGD	RGSC3.4
RGSC_v3.4	17	93,530,222 - 93,530,435	UniSTS	RGSC3.4
Celera	17	81,359,177 - 81,359,390	UniSTS
RGSC_v3.1	17	93,541,054 - 93,541,268	RGD
SHRSP x BN Map	17	47.5999	UniSTS
SHRSP x BN Map	17	47.5999	RGD
Cytogenetic Map	17	q12.3	UniSTS

D17Got109

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	82,156,496 - 82,156,663 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	86,304,573 - 86,304,739	NCBI	Rnor6.0
Rnor_5.0	17	88,014,963 - 88,015,129	UniSTS	Rnor5.0
RGSC_v3.4	17	93,601,999 - 93,602,166	RGD	RGSC3.4
RGSC_v3.4	17	93,602,000 - 93,602,166	UniSTS	RGSC3.4
Celera	17	81,428,535 - 81,428,705	UniSTS
RGSC_v3.1	17	93,612,833 - 93,612,999	RGD
RH 3.4 Map	17	835.8	UniSTS
RH 3.4 Map	17	835.8	RGD
RH 2.0 Map	17	721.6	RGD
Cytogenetic Map	17	q12.3	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
6	3	20	115	47	46	15	30	15	6	128	75	6	93	30	57	31	11	11

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001419562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771933	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008774041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005495400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010058939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000034474 ⟹ ENSRNOP00000029728

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	86,980,186 - 87,082,700 (-)	Ensembl
mRatBN7.2 Ensembl	17	82,071,838 - 82,174,353 (-)	Ensembl
Rnor_6.0 Ensembl	17	86,239,087 - 86,322,144 (-)	Ensembl

RefSeq Acc Id:

NM_001419562 ⟹ NP_001406491

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,980,186 - 87,082,700 (-)	NCBI
mRatBN7.2	17	82,071,846 - 82,174,358 (-)	NCBI

RefSeq Acc Id:

XM_008771933 ⟹ XP_008770155

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,983,591 - 87,082,723 (-)	NCBI
mRatBN7.2	17	82,078,657 - 82,174,401 (-)	NCBI
Rnor_6.0	17	86,227,106 - 86,322,177 (-)	NCBI

Sequence:

show sequence

CTCAGAGCTCAGAGCGAGCGGTTGGGTGGTGACATGGCGGAGGCTGAGACTGAGCCTGAGGAAT
GGAAGGCGACGCGGGGATGCAGAAAGATTCTCCAGACCCTCGAGGGGGCTATAGAGCAATTCAA
ATTCCATTCCAGACTTGCTATTTCTGATGAACTAAAGGTCGGTTTCTTCACTTCAGACCATGCT
ACTCAGACAGACTGCAGTGAAGTTTTTCCTTTGAAAGATTTGATTCAATCCACGGAGAAGTTAA
TGCGTACGATTACGTCACTTCAGGTGGATTTTGGGTTCCTCAAAGACTTGGTTCAACTAAAGTT
CGAGGACCGACTTAAAGAGGAGTCTTGGAAAATTGTCGGCATACTCTGTGACAAAATGTTAGAG
ATGAAGAAGCACTATCAGCAGGGAGAAGATATCATGAGAAAAAGCTTTCAACAGCAGCTATGTG
ATGCCATTGCTGTCATCAGAGGAATGTACCAGAATTTCTTCGAACTAGAAGGCGAAAAGGCCGC
CCTGCAAGATGCAGCAAATGTCAAAATGGGTGTTTTGTCGAAAAAAATGAGAGAGAAAGAAGAA
GTTATTAGGAGTTTAAGGAATGAACTAGAACTATATGAAGAGTTTGGATTTAAGAAAGTTGATT
CCAAGGAGTCCAGCTCTCTAAGAACAACCTCAGAAAAGGAACTTATGGATTGCAGGGCAGAGAA
CGAGAGGTTGATGCAAATCATCACAGTGCTTGAGGAGGAATCACAAGGGGCCATGAAAGAAAAC
GCATTATTAGAGGATGAAATTATGTATCTGAAAGAGATTTCAGAACAGGATCAGCGAACTATTC
AAAAGTTAATGGATAGCAGAGACAGACTGAGGTATGAGCTGGACTGTGAAAAACTAGCCATTCA
AGAAATGATCAACAGACAGAAAGAGGACATTGAAATTAAAAAGAAGTATGCCAGTATAGCCACC
CGTATTGGCGGCAAGAGAGGAACATTTGCCAAGGGAAGAGAGTCTTCTGTCTACCTANNACAAG
CCAGAGAGGGCTCACAGTTTGTGCGGCCCCCTGGAACTTCCCTCAGTGTGTCTCCAAAGATGAA
AAGGAAGGCATCGAAGAAATTTCCTGTGGTTACGTTCGCTCCTTCTGCCACCATTATCCCTGAT
ACAATAGAGACGCCGACGCCGACGACGACGACGCCGACGCCGACGACGACGCCGACGCCGACGA
CGACGCCAACGACGACGCCGACACCGACGACAACGACGGCCATGGCTCCTACCTCTTCTGAGAT
TTTTACCAGTCTCCTTTCAAAGCCTTCAGACAAGCGTGTTACATTTCTACTACCTAATGTGGTG
CCTGAAGAATTATTTATGAAATATCAGATGATTAAGGAAGAAGAAAAAAAAATTCTGGAGAGTC
AAATAAGTCTTTTAAAATCTGCATTGGAAGAGGAGGGGAAGAGAATAGAAAGGTTTAAAAAGGA
TACGGATCACTCCAACAAAAACTGGGAGAAGAAATTCCTCATCCTCAGGAACAGCTTTCACGTC
CTAAAGAATGAGATGTTCACTAGACAAGCACTTTATCGGCAGTGTGCGGTGACTGCTGACAGCT
CTTTCAATTATGTCAAAGTTAAGCCCTTGTTTGTGCACTCCAGTATGCAAATGCCACAGATATC
CAATCCTTCACACCTTCCTCGTCCATCCATGATTCAGATGGAGTCCAAATTGGAGAACGCACAC
AGTGATCAGGTGACTAATAAGGAGTACCAGGAAGGTAAGAATCTAGGGAGTGGGAGTGGAGGTG
TTTTCCATAGTCCCAGCATATCTGAAGCCGTGACCTCCCCGACAACACCAAAGGAAAGCAGGAC
AAGACCCTGTCCTGTTACAAAGAGGTCCACATATAGCCTGAGTGCACGAAACAGATCAACCTTC
ATATCTCCTTCTTTCTCCTTCAACATTCTCTTCCCCCTCTTCTGAGCCTCAGTCTCCAGTCAAG
ACTGGCATCAACCCTCACAGAAACCCTCCCTCCATTTTGTTTTTCTTGTTTAGCCAGAGGCATT
TGGTATCATGATGAAATCAAGATTTTTTTTTCAATTTATAAACTTCTTGCCTCTCTGTGTTCTG
ACTGCTGCTAGTTGAAAGCATATTTTGTCATTTTTCAAACTCAGAAGCTATCTCAGTTAAAATT
TCATTTCTTTTTACTAGACTGCAAAAAAATGAAAAAAACAAAATTCTGAAGCACTAGTTAAATG
TCTGTTTATCCAATTTAATAATTGGCAGAAAGAGAAAACCGTTTCTTGCAAAATTCTCTTTGAT
CAATCCTTAAAGAGCTTCAAATTGGATGTATTTTTACAATGTATTTGGTCCATACACATCCGTA
AAACTTTCCTCTGAACTTGGAAGCCAAATTAAGTCTAAGTAAGAGTGCTCAGGGAGAGGGATGA
GGGTGGGTCTCCGTGGTAAAGTGTTTGATTAGAGTATATGAGATCCCAGGATTAATATTCAGGG
TTGGGGGAAAGGAATTCATTATTTCAAGCTTATAAATTGATAGAGCACAGTAAATTAATAAGAT
ATAATAATGTCGTTTTGTATTATTAGCATTGATCTTGACTGACCCCTGAGTGAGTGATTCACTT
GGCATGTTTAGAAACATTTAAAAGTAGATTAGATAATGAGTTTGTGCAGGGAGATTCGGTGAGC
TAAGAGCTTAAGTGCCAGTCTCTGCAGAAAGTGTGAAGCATCTCCTTCCTGGGTGTCTGTGCAG
TGGGAACATTTCCTGTGGTTGTGTGCACTGGTGATGTCCGGTCAGTGGTTGTCTTCCTAGGGAC
AAAGGAATCTTTGAGCAAACACAGTGATGGGAACTTCCCCCGAGCTGACTAGATTACACCATGC
TCACGCTAGACTTCATAGCTTAGGAAACAGCAATGTTTAAAGATGTCACTGTTTAAATAATGAC
TTAGATCTGTTAGATTGGAAATCCCAGCTCATATTGTAAGCCATTTCTAAAACATCTAAGTGGA
CTTGTGCCTTATCATGAAAAAAGAGTGGGTTGGTTAATTTAGAGTTTGTTGCTGACCTAAATTT
TGAATTAGAAGATTATAATCACAGCAGTACATTCCCAAACAATCCAGGTGAGAAAACTGTGTCC
ACAGTTGACTTTCCGAGGCTGGTAAAATAGCTTAGTAAAGAGCTTTGCCTTGCCTCTCTAGGTA
TTGGATTACACACACACA

hide sequence

RefSeq Acc Id:

XM_039096205 ⟹ XP_038952133

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,970,801 - 87,082,723 (-)	NCBI
mRatBN7.2	17	82,062,461 - 82,174,401 (-)	NCBI

RefSeq Acc Id:

XM_039096207 ⟹ XP_038952135

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,974,503 - 87,082,723 (-)	NCBI
mRatBN7.2	17	82,073,422 - 82,174,401 (-)	NCBI

RefSeq Acc Id:

XM_039096208 ⟹ XP_038952136

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,983,591 - 87,065,628 (-)	NCBI
mRatBN7.2	17	82,078,657 - 82,157,183 (-)	NCBI

RefSeq Acc Id:

XM_063276741 ⟹ XP_063132811

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,998,941 - 87,082,723 (-)	NCBI

RefSeq Acc Id:

XM_063276742 ⟹ XP_063132812

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,970,801 - 87,065,627 (-)	NCBI

RefSeq Acc Id:

XM_063276743 ⟹ XP_063132813

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,974,503 - 87,065,627 (-)	NCBI

RefSeq Acc Id:

XM_063276744 ⟹ XP_063132814

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,974,503 - 87,065,627 (-)	NCBI

RefSeq Acc Id:

XM_063276745 ⟹ XP_063132815

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,999,338 - 87,065,628 (-)	NCBI

RefSeq Acc Id:

XR_005495400

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,974,503 - 87,082,723 (-)	NCBI
mRatBN7.2	17	82,073,422 - 82,174,401 (-)	NCBI

RefSeq Acc Id:

XR_010058939

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	86,974,503 - 87,082,723 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001406491	(Get FASTA)	NCBI Sequence Viewer
	XP_008770155	(Get FASTA)	NCBI Sequence Viewer
	XP_038952133	(Get FASTA)	NCBI Sequence Viewer
	XP_038952135	(Get FASTA)	NCBI Sequence Viewer
	XP_038952136	(Get FASTA)	NCBI Sequence Viewer
	XP_063132811	(Get FASTA)	NCBI Sequence Viewer
	XP_063132812	(Get FASTA)	NCBI Sequence Viewer
	XP_063132813	(Get FASTA)	NCBI Sequence Viewer
	XP_063132814	(Get FASTA)	NCBI Sequence Viewer
	XP_063132815	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000029728
	ENSRNOP00000029728.7

RefSeq Acc Id:

XP_008770155 ⟸ XM_008771933

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAEAETEPEEWKATRGCRKILQTLEGAIEQFKFHSRLAISDELKVGFFTSDHATQTDCSEVFPL
KDLIQSTEKLMRTITSLQVDFGFLKDLVQLKFEDRLKEESWKIVGILCDKMLEMKKHYQQGEDI
MRKSFQQQLCDAIAVIRGMYQNFFELEGEKAALQDAANVKMGVLSKKMREKEEVIRSLRNELEL
YEEFGFKKVDSKESSSLRTTSEKELMDCRAENERLMQIITVLEEESQGAMKENALLEDEIMYLK
EISEQDQRTIQKLMDSRDRLRYELDCEKLAIQEMINRQKEDIEIKKKYASIATRIGGKRGTFAK
GRESSVYLXQAREGSQFVRPPGTSLSVSPKMKRKASKKFPVVTFAPSATIIPDTIETPTPTTTT
PTPTTTPTPTTTPTTTPTPTTTTAMAPTSSEIFTSLLSKPSDKRVTFLLPNVVPEELFMKYQMI
KEEEKKILESQISLLKSALEEEGKRIERFKKDTDHSNKNWEKKFLILRNSFHVLKNEMFTRQAL
YRQCAVTADSSFNYVKVKPLFVHSSMQMPQISNPSHLPRPSMIQMESKLENAHSDQVTNKEYQE
GKNLGSGSGGVFHSPSISEAVTSPTTPKESRTRPCPVTKRSTYSLSARNRSTFISPSFSFNILF
PLF

hide sequence

Ensembl Acc Id:

ENSRNOP00000029728 ⟸ ENSRNOT00000034474

RefSeq Acc Id:	XP_038952133 ⟸ XM_039096205
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038952135 ⟸ XM_039096207
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038952136 ⟸ XM_039096208
- Peptide Label:	isoform X5

RefSeq Acc Id:	NP_001406491 ⟸ NM_001419562
- UniProtKB:	D4ADD9 (UniProtKB/TrEMBL), A6JMA5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132812 ⟸ XM_063276742
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063132813 ⟸ XM_063276743
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063132814 ⟸ XM_063276744
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063132811 ⟸ XM_063276741
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063132815 ⟸ XM_063276745
- Peptide Label:	isoform X9

Protein Domains

DUF4709 DUF4724

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ADD9-F1-model_v2	AlphaFold	D4ADD9	1-494	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1598031	AgrOrtholog
BioCyc Gene	G2FUF-8527	BioCyc
Ensembl Genes	ENSRNOG00000021898	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000034474	ENTREZGENE
	ENSRNOT00000034474.8	UniProtKB/TrEMBL
InterPro	C10orf67-like	UniProtKB/TrEMBL
	DUF4709	UniProtKB/TrEMBL
	DUF4724	UniProtKB/TrEMBL
NCBI Gene	681241	ENTREZGENE
PANTHER	PTHR22382	UniProtKB/TrEMBL
	RIKEN CDNA 4921504E06 GENE	UniProtKB/TrEMBL
Pfam	DUF4709	UniProtKB/TrEMBL
	DUF4724	UniProtKB/TrEMBL
PhenoGen	C17h10orf67	PhenoGen
RatGTEx	ENSRNOG00000021898	RatGTEx
UniProt	A6JMA5	ENTREZGENE, UniProtKB/TrEMBL
	D4ADD9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-09-19	C17h10orf67	similar to human chromosome 10 open reading frame 67	LOC681241	hypothetical protein LOC681241	Symbol and Name Changed	1299863	APPROVED
2006-11-20	LOC681241	hypothetical protein LOC681241			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar