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Gene: Prr22 (proline rich 22) Rattus norvegicus

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Symbol:

Prr22

Name:

proline rich 22

RGD ID:

1595447

Description:

Orthologous to human PRR22 (proline rich 22); INTERACTS WITH 6-propyl-2-thiouracil; acetamide; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC680177; hypothetical protein LOC682170; LOC680177; proline-rich protein 22

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PRR22 (proline rich 22)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Prr22 (proline rich 22)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Prr22 (proline rich 22)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PRR22 (proline rich 22)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PRR22 (proline rich 22)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Prr22 (proline rich 22)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PRR22 (proline rich 22)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PRR22 (proline rich 22)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Prr22 (proline rich 22)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Prr22 (proline rich 22)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	PRR22 (proline rich 22)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Prr22 (proline rich 22)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	1,686,295 - 1,688,129 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	1,686,295 - 1,688,129 (+)	Ensembl				GRCr8
mRatBN7.2	9	1,599,169 - 1,601,003 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	1,599,148 - 1,601,416 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	2,033,326 - 2,035,160 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	7,382,426 - 7,384,260 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	6,338,522 - 6,340,356 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	10,286,755 - 10,289,340 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	10,287,086 - 10,290,035 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	9,284,180 - 9,286,387 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Celera	9	6,915,746 - 6,917,566 (-)	NCBI		Celera
Cytogenetic Map	9	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

amitrole (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

butanal (ISO)

diazinon (ISO)

dicrotophos (ISO)

iron dichloride (ISO)

methimazole (EXP)

rotenone (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

temozolomide (ISO)

thioacetamide (EXP)

trichloroethene (EXP)

valproic acid (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Prr22
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	1,686,295 - 1,688,129 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	1,686,295 - 1,688,129 (+)	Ensembl				GRCr8
mRatBN7.2	9	1,599,169 - 1,601,003 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	1,599,148 - 1,601,416 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	2,033,326 - 2,035,160 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	7,382,426 - 7,384,260 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	6,338,522 - 6,340,356 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	10,286,755 - 10,289,340 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	10,287,086 - 10,290,035 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	9,284,180 - 9,286,387 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Celera	9	6,915,746 - 6,917,566 (-)	NCBI		Celera
Cytogenetic Map	9	q11	NCBI

PRR22
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	5,782,960 - 5,784,746 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	5,782,960 - 5,784,746 (-)	Ensembl			hg38	GRCh38
GRCh37	19	5,782,971 - 5,784,757 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	5,733,971 - 5,735,610 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	19	5,720,964 - 5,722,769 (-)	NCBI		Celera
Cytogenetic Map	19	p13.3	NCBI
HuRef	19	5,543,905 - 5,545,710 (-)	NCBI		HuRef
CHM1_1	19	5,782,899 - 5,784,704 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	5,769,757 - 5,771,543 (-)	NCBI		T2T-CHM13v2.0

Prr22
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	57,077,276 - 57,079,134 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	57,077,250 - 57,079,208 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	56,770,276 - 56,772,134 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	56,770,250 - 56,772,208 (+)	Ensembl			mm10	GRCm38
MGSCv37	17	56,909,699 - 56,911,557 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	56,909,699 - 56,911,557 (+)	NCBI		MGSCv36	mm8
Celera	17	61,114,417 - 61,116,275 (+)	NCBI		Celera
Cytogenetic Map	17	D	NCBI
cM Map	17	29.5	NCBI

Prr22
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	3,659,972 - 3,662,624 (+)	Ensembl
ChiLan1.0	NW_004955495	3,660,380 - 3,662,642 (+)	NCBI	ChiLan1.0	ChiLan1.0

PRR22
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	10,177,025 - 10,179,065 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	9,403,225 - 9,405,030 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1 Ensembl	19	5,729,277 - 5,731,256 (-)	Ensembl			panPan2	panpan1.1

PRR22
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	54,256,356 - 54,258,341 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	54,255,609 - 54,258,322 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	53,983,566 - 53,985,782 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	54,908,481 - 54,910,721 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	54,903,238 - 54,910,706 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	53,974,780 - 53,976,996 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	54,455,329 - 54,457,542 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	54,652,571 - 54,654,786 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Prr22
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	214,503,428 - 214,505,206 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936588	3,329,593 - 3,331,348 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936588	3,329,577 - 3,331,883 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PRR22
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	73,179,161 - 73,204,979 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	73,202,928 - 73,204,979 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	73,725,067 - 73,726,902 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PRR22
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	5,428,380 - 5,430,460 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	5,428,398 - 5,430,077 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666081	2,625,282 - 2,627,306 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Prr22
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624828	4,437,925 - 4,439,736 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624828	4,437,612 - 4,439,748 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Prr22
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	88,140,917 - 88,143,119 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Prr22
1 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	51
Count of miRNA genes:	46
Interacting mature miRNAs:	49
Transcripts:	ENSRNOT00000075201
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631533	Iresp3	Immunoglobin response QTL3	16.2		blood immunoglobulin E amount (VT:0002492)	serum immunoglobulin E level (CMO:0002101)	9	1	6094576	Rat
10054141	Gmadr4	Adrenal mass QTL 4	2.45	0.0074	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	9	1	21707400	Rat
9589158	Gluco65	Glucose level QTL 65	6.82	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	9	496645	45496645	Rat
7411592	Foco8	Food consumption QTL 8	7.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	496645	45496645	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	1	31250552	Rat
9589055	Scfw5	Subcutaneous fat weight QTL 5	5.55	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	9	496645	45496645	Rat
1300124	Cm4	Cardiac mass QTL 4	3.55		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	9	1	41763315	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	11	66	160	91	90	59	87	59	6	349	185	10	139	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001126375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC161872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000075201 ⟹ ENSRNOP00000066533

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	1,686,295 - 1,688,129 (+)	Ensembl
mRatBN7.2 Ensembl	9	1,599,148 - 1,601,416 (+)	Ensembl
Rnor_6.0 Ensembl	9	10,287,086 - 10,290,035 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000163455 ⟹ ENSRNOP00000106466

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	1,686,309 - 1,688,128 (+)	Ensembl

RefSeq Acc Id:

NM_001126375 ⟹ NP_001119847

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,686,309 - 1,688,129 (+)	NCBI
mRatBN7.2	9	1,599,183 - 1,601,003 (+)	NCBI
Rnor_6.0	9	10,287,100 - 10,288,920 (-)	NCBI
Rnor_5.0	9	9,284,180 - 9,286,387 (-)	NCBI
Celera	9	6,915,746 - 6,917,566 (-)	RGD

Sequence:

show sequence

CTGCTGCCACCCGGGCCCCCCCGGGGTGGCCTGTCTCACCCATGCAGCATCCCAAAACCCTCTA
TCCCCCAGCCATACCCCAGGAAAGCTTCAGCCTGCAGAACCTGGAGGGCCCTGAGGTACCAGGT
GGCTCAGAACCCCTTCCCACTGTAGCCAATGCTAACCTGCACTATCAGAACCCCGGCTCTGACC
AGGAAGTGCTTCCAGCCCCTCCAGCAGGTATCGGCCGGCACCCTTGAGCCTCGCTCTGAACAGG
CTTCATACCCAAGATGAGACCCCAGAATTGCCCTGGGTCCCCTCTACCCCAGACAGATACCCCC
ATAGCTGAACTGTGTCATGTTTTGAAGTAACACTGGAGAGCAGGCTGAAGCCTGCTTTGGTGAC
AGCGGCTGCCACTAGGCAAGGCTTTCTGAGAGGCCTGGGCACCCGAATTCAGGTCGTTGTTTTC
CTGAGAGGCATCAGAGGAGAGGACCCCAACAGTCTCTGTGTCTTGCCCCCCACGAGTCCCCAGA
TGACTGGTAAACAGCCAGTTTTCAAGGCTCCTCAGAGGCCAAGGCTGTGTCCTATGTCCTGGGC
TTTGGGACCCTCAACCCCCATGGCCTGGTTCCCCCATGGAGCCCCACTCAGGTGTCCACCACCC
ACAGGCTTCCAGATGGCTCCCTGCGGCTGCTTCTTCGACCCCCGCATCTACCGCATCGAGTGGG
CCACCTCCGACTTTGGCCAGTCATCCCTGTACAAGGTGGCAGTGGCTGGGGGTCCTGCCTTATC
TGGTGGCTACCTGCTGGAGGCCCCGTCCTACCTCAAGACCCCGGGGCCACCACCTCTGCTTTAT
CCCCACTACCAGCCGGCCCCCAGCGGGCCACAGTACCTCACACATTTCCTTCCACCAGAGGAGC
CTATGCCTGAGGCTCTGGGCTTCATGCGGGACGGAGGGCCCCTCAACTTCATGGAGGTGCTCAG
AGACGGCCTGGCACCCCCGCCAACCCCCAAAGAGACTAAGCCATCTCCCTTGCTTATCACAGTC
CCCACAGCACACACGCTGCCACCTGGGCCCTATGGCCATCTCGGTGGCCAGACCAGCCAGTTTC
CAGGACCCCAGGTGACCATGAGGCCCACCGAGGCCCCCAGGGAGCTGCAGAGTAGTGGTGCAGC
CAGGCCGGGTCTGCAGTTCCCTCCTGGGCCTGGAGAGCCCACGGTGGCCAAGGTGGAGGAGGTC
ACCCCAGTGGGCTCAAGTGAGACCGTGCCTCCCGAGGTGGCTCGTGCGTTCTTCCTACCAGACA
AGGTCCTTCTAGAAGATGCCATGAAACTTTTTGATTGTCTCCCTGGTGGCACTGAACCTGAGGT
GGCCTTGCACAGGGGTCCTGGCCCCGGACTGCGGGACAGTGGTGGTGGTGGGGACGACTTCCCA
ACTGACATCCGCTCCCTGCACCTGCCAGATGACCTGCTGTCCTTTGACTACAGTGTCCCTGAGA
TTCTGGACGCGGTGGCCAACGTGGATTATGTTTTCAGCTTCAAGGCCCTGGAGGATGAGCCGCT
GCCCCATCTTGGGGCCCCTGTCACTGACACGGCGGCCCCTGGCCTGCGGTCCCATCAACCGGGG
AAAAAACCGAGCACATCCACCAAGAAAGGGAAACCAAGCGGTAGACACAGGCAGGCCACTGGCC
TTGCTGGCACCACTGCCACAGGACCCAGGCTGGACCCAGGAGCCACCCCCAATTAAAGCCATTT
GATCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001399121 ⟹ NP_001386050

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,686,295 - 1,688,129 (+)	NCBI
mRatBN7.2	9	1,599,169 - 1,601,003 (+)	NCBI

RefSeq Acc Id:

XM_039084199 ⟹ XP_038940127

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,686,375 - 1,688,129 (+)	NCBI
mRatBN7.2	9	1,599,190 - 1,601,003 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001119847	(Get FASTA)	NCBI Sequence Viewer
	NP_001386050	(Get FASTA)	NCBI Sequence Viewer
	XP_038940127	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI61872	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000066533
	ENSRNOP00000066533.4
	ENSRNOP00000106466
	ENSRNOP00000106466.1

RefSeq Acc Id:	NP_001119847 ⟸ NM_001126375
- Peptide Label:	isoform 2
- UniProtKB:	B1WBS8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTGKQPVFKAPQRPRLCPMSWALGPSTPMAWFPHGAPLRCPPPTGFQMAPCGCFFDPRIYRIEW ATSDFGQSSLYKVAVAGGPALSGGYLLEAPSYLKTPGPPPLLYPHYQPAPSGPQYLTHFLPPEE PMPEALGFMRDGGPLNFMEVLRDGLAPPPTPKETKPSPLLITVPTAHTLPPGPYGHLGGQTSQF PGPQVTMRPTEAPRELQSSGAARPGLQFPPGPGEPTVAKVEEVTPVGSSETVPPEVARAFFLPD KVLLEDAMKLFDCLPGGTEPEVALHRGPGPGLRDSGGGGDDFPTDIRSLHLPDDLLSFDYSVPE ILDAVANVDYVFSFKALEDEPLPHLGAPVTDTAAPGLRSHQPGKKPSTSTKKGKPSGRHRQATG LAGTTATGPRLDPGATPN hide sequence

Ensembl Acc Id:

ENSRNOP00000066533 ⟸ ENSRNOT00000075201

RefSeq Acc Id:	XP_038940127 ⟸ XM_039084199
- Peptide Label:	isoform X1
- UniProtKB:	M0RAI3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001386050 ⟸ NM_001399121
- Peptide Label:	isoform 1
- UniProtKB:	M0RAI3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000106466 ⟸ ENSRNOT00000163455

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0RAI3-F1-model_v2	AlphaFold	M0RAI3	1-417	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696460

Promoter ID:

EPDNEW_R6975

Type:

initiation region

Name:

Prr22_1

Description:

proline rich 22

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	10,288,934 - 10,288,994	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1595447	AgrOrtholog
BioCyc Gene	G2FUF-28512	BioCyc
Ensembl Genes	ENSRNOG00000047295	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000075201	ENTREZGENE
	ENSRNOT00000075201.4	UniProtKB/TrEMBL
	ENSRNOT00000163455	ENTREZGENE
	ENSRNOT00000163455.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7112899	IMAGE-MGC_LOAD
InterPro	PRR22	UniProtKB/TrEMBL
KEGG Report	rno:680177	UniProtKB/TrEMBL
MGC_CLONE	MGC:187430	IMAGE-MGC_LOAD
NCBI Gene	680177	ENTREZGENE
PANTHER	PROLINE-RICH PROTEIN 22	UniProtKB/TrEMBL
	PTHR37871	UniProtKB/TrEMBL
Pfam	PRR22	UniProtKB/TrEMBL
PhenoGen	Prr22	PhenoGen
RatGTEx	ENSRNOG00000047295	RatGTEx
UniProt	B1WBS8	ENTREZGENE, UniProtKB/TrEMBL
	M0RAI3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-05-24	Prr22	proline rich 22	LOC682170	hypothetical protein LOC682170	Data merged from RGD:1586918	1643240	APPROVED
2010-04-21	Prr22	proline rich 22	LOC680177	hypothetical protein LOC680177	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-20	LOC680177	hypothetical protein LOC680177			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-11-19	LOC682170	hypothetical protein LOC682170			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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