Rsu1 (Ras suppressor protein 1) - Rat Genome Database

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Gene: Rsu1 (Ras suppressor protein 1) Rattus norvegicus
Analyze
Symbol: Rsu1
Name: Ras suppressor protein 1
RGD ID: 1591781
Description: Predicted to be involved in Ras protein signal transduction and positive regulation of cell-substrate adhesion. Predicted to act upstream of or within positive regulation of neural precursor cell proliferation. Predicted to be located in focal adhesion. Orthologous to human RSU1 (Ras suppressor protein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC680419; similar to Ras suppressor protein 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81781,037,848 - 81,286,127 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1781,042,595 - 81,286,030 (-)EnsemblGRCr8
mRatBN7.21776,128,774 - 76,377,515 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1776,188,812 - 76,377,454 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1779,654,121 - 79,850,100 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01783,489,506 - 83,685,483 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01777,537,425 - 77,733,391 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01780,388,477 - 80,577,338 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1780,389,157 - 80,577,027 (-)Ensemblrn6Rnor6.0
Rnor_5.01782,009,674 - 82,197,926 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41787,345,488 - 87,538,289 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1775,557,867 - 75,746,355 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View
Chloracne  (ISO)
osteoporosis  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
focal adhesion  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1508180   PMID:20458337   PMID:20926685   PMID:23376485   PMID:24719101   PMID:25931508   PMID:31505169  


Genomics

Comparative Map Data
Rsu1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81781,037,848 - 81,286,127 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1781,042,595 - 81,286,030 (-)EnsemblGRCr8
mRatBN7.21776,128,774 - 76,377,515 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1776,188,812 - 76,377,454 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1779,654,121 - 79,850,100 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01783,489,506 - 83,685,483 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01777,537,425 - 77,733,391 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01780,388,477 - 80,577,338 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1780,389,157 - 80,577,027 (-)Ensemblrn6Rnor6.0
Rnor_5.01782,009,674 - 82,197,926 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41787,345,488 - 87,538,289 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1775,557,867 - 75,746,355 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
RSU1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381016,590,611 - 16,817,424 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1016,590,611 - 16,817,463 (-)Ensemblhg38GRCh38
GRCh371016,632,610 - 16,859,423 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361016,672,621 - 16,899,459 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341016,672,622 - 16,899,459NCBI
Celera1016,565,823 - 16,792,666 (-)NCBICelera
Cytogenetic Map10p13NCBI
HuRef1016,545,647 - 16,773,246 (-)NCBIHuRef
CHM1_11016,632,861 - 16,859,640 (-)NCBICHM1_1
T2T-CHM13v2.01016,609,081 - 16,835,881 (-)NCBIT2T-CHM13v2.0
Rsu1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39213,081,778 - 13,276,116 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl213,081,632 - 13,276,226 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38213,076,967 - 13,271,438 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl213,076,821 - 13,271,415 (-)Ensemblmm10GRCm38
MGSCv37212,998,636 - 13,192,905 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36212,994,862 - 13,189,131 (-)NCBIMGSCv36mm8
Celera212,987,343 - 13,181,159 (-)NCBICelera
Cytogenetic Map2A1NCBI
cM Map29.73NCBI
Rsu1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542911,043,040 - 11,235,758 (+)Ensembl
ChiLan1.0NW_00495542911,043,205 - 11,234,698 (+)NCBIChiLan1.0ChiLan1.0
RSU1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2829,435,295 - 29,660,316 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11029,438,590 - 29,665,616 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01016,909,912 - 17,134,697 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11017,183,859 - 17,408,233 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1017,184,511 - 17,407,769 (-)EnsemblpanPan2panpan1.1
RSU1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1220,050,029 - 20,299,179 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl220,050,117 - 20,299,184 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha217,159,566 - 17,408,494 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0220,341,793 - 20,591,529 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl220,341,803 - 20,591,534 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1217,550,016 - 17,798,962 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0218,382,675 - 18,631,913 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0219,008,189 - 19,257,447 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Rsu1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934417,355,825 - 17,540,972 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493652010,419,395 - 10,604,762 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493652010,419,405 - 10,602,820 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RSU1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1045,079,007 - 45,289,422 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11045,079,014 - 45,492,073 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21049,812,898 - 49,996,912 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RSU1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1916,539,230 - 16,768,526 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl916,535,573 - 16,768,593 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605122,171,431 - 22,402,493 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rsu1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479610,994,062 - 11,183,562 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462479610,994,043 - 11,183,091 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Rsu1
1293 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:155
Count of miRNA genes:106
Interacting mature miRNAs:115
Transcripts:ENSRNOT00000057827
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
152023626Bp403Blood pressure QTL 4033.86arterial blood pressure trait (VT:2000000)172413612784432719Rat
2301412Kidm40Kidney mass QTL 400.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)174238816487388164Rat
631502Cm26Cardiac mass QTL 263.71heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)177061350286062352Rat
1354588Bvd4Brain ventricular dilatation QTL 45.310.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)175819406487388164Rat
1354654Spl7Serum phospholipid level QTL 75.5blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)173803135483031354Rat
2317038Ginf3Gastrointestinal inflammation QTL 32.890.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)175482950393515804Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174096801789341781Rat
1581512Cm55Cardiac mass QTL 552.80.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172723344583975845Rat
1354629Scl31Serum cholesterol level QTL 314.1blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)173803135483031354Rat
152025238Slep14Serum leptin concentration QTL 144.62blood leptin amount (VT:0005667)172439059584432719Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)173803135483031354Rat
61466Niddm12Non-insulin dependent diabetes mellitus QTL 123.20.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)176515487293515804Rat
1354635Bp245Blood pressure QTL 2456arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)173803135483031354Rat
12904736Cm121Cardiac mass QTL 1210.043heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)174238816487388164Rat
1300148Bp192Blood pressure QTL 1923.47arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)174605012691050126Rat
4889894Eae33Experimental allergic encephalomyelitis QTL 335.20.0001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)175560459793006569Rat
2324621Coatc5Coat color QTL 5coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)174265489587654895Rat
1354619Bp242Blood pressure QTL 2426.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)173768787782687877Rat
1300131Bp193Blood pressure QTL 1933.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)176855004093515804Rat
7488963Bp369Blood pressure QTL 3690.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)176369714782818564Rat
1300129Rf25Renal function QTL 253.03blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)174106235286062352Rat
152023740Bp406Blood pressure QTL 4066.06arterial blood pressure trait (VT:2000000)172413612784432719Rat
1354663Bvd5Brain ventricular dilatation QTL 53.510.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)173219953486201342Rat
152023737Bp405Blood pressure QTL 4055.06arterial blood pressure trait (VT:2000000)2413612784432719Rat
152023736Bp404Blood pressure QTL 4043.78arterial blood pressure trait (VT:2000000)172413612784432719Rat
724528Uae4Urinary albumin excretion QTL 44.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)173604553781045537Rat
2302365Gluco40Glucose level QTL 404.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)176456982086954580Rat

Markers in Region
D17Mit8  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81781,216,743 - 81,216,953 (+)Marker Load Pipeline
Rnor_6.01780,508,514 - 80,508,701NCBIRnor6.0
Rnor_5.01782,129,711 - 82,129,898UniSTSRnor5.0
RGSC_v3.41787,465,134 - 87,465,345RGDRGSC3.4
RGSC_v3.41787,465,135 - 87,465,344UniSTSRGSC3.4
Celera1775,676,891 - 75,677,090UniSTS
RGSC_v3.11787,475,967 - 87,476,178RGD
RH 3.4 Map17773.0UniSTS
RH 3.4 Map17773.0RGD
RH 2.0 Map17676.0RGD
SHRSP x BN Map1745.1899RGD
FHH x ACI Map1759.8RGD
Cytogenetic Map17q12.3UniSTS
D17Got95  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21776,279,420 - 76,279,572 (+)MAPPERmRatBN7.2
Rnor_6.01780,479,196 - 80,479,347NCBIRnor6.0
Rnor_5.01782,100,393 - 82,100,544UniSTSRnor5.0
RGSC_v3.41787,436,392 - 87,436,544RGDRGSC3.4
RGSC_v3.41787,436,393 - 87,436,544UniSTSRGSC3.4
Celera1775,648,169 - 75,648,328UniSTS
RGSC_v3.11787,447,226 - 87,447,377RGD
RH 3.4 Map17773.7UniSTS
RH 3.4 Map17773.7RGD
RH 2.0 Map17678.5RGD
Cytogenetic Map17q12.3UniSTS
D17Got100  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21776,201,055 - 76,201,249 (+)MAPPERmRatBN7.2
Rnor_6.01780,400,803 - 80,400,998NCBIRnor6.0
Rnor_5.01782,022,000 - 82,022,195UniSTSRnor5.0
RGSC_v3.41787,357,743 - 87,357,939RGDRGSC3.4
RGSC_v3.41787,357,744 - 87,357,939UniSTSRGSC3.4
Celera1775,570,121 - 75,570,316UniSTS
RGSC_v3.11787,368,577 - 87,368,772RGD
RH 3.4 Map17780.9UniSTS
RH 3.4 Map17780.9RGD
RH 2.0 Map17678.7RGD
Cytogenetic Map17q12.3UniSTS
RH142882  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21776,353,688 - 76,353,806 (+)MAPPERmRatBN7.2
Rnor_6.01780,553,656 - 80,553,773NCBIRnor6.0
Rnor_5.01782,174,244 - 82,174,361UniSTSRnor5.0
RGSC_v3.41787,512,057 - 87,512,174UniSTSRGSC3.4
Celera1775,722,604 - 75,722,721UniSTS
RH 3.4 Map17774.8UniSTS
Cytogenetic Map17q12.3UniSTS
AU048702  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01780,508,517 - 80,508,773NCBIRnor6.0
Rnor_5.01782,129,714 - 82,129,970UniSTSRnor5.0
RGSC_v3.41787,465,138 - 87,465,416UniSTSRGSC3.4
Celera1775,676,894 - 75,677,162UniSTS
Cytogenetic Map17q12.3UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000057827   ⟹   ENSRNOP00000054637
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1781,042,595 - 81,286,030 (-)Ensembl
mRatBN7.2 Ensembl1776,188,813 - 76,377,454 (-)Ensembl
Rnor_6.0 Ensembl1780,389,157 - 80,577,027 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000111132   ⟹   ENSRNOP00000089680
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1776,188,820 - 76,377,434 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000119841   ⟹   ENSRNOP00000079328
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1781,097,867 - 81,286,030 (-)Ensembl
mRatBN7.2 Ensembl1776,188,812 - 76,377,452 (-)Ensembl
RefSeq Acc Id: NM_001109404   ⟹   NP_001102874
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81781,097,867 - 81,286,030 (-)NCBI
mRatBN7.21776,188,800 - 76,377,457 (-)NCBI
Rnor_6.01780,388,477 - 80,577,338 (-)NCBI
Rnor_5.01782,009,674 - 82,197,926 (-)NCBI
RGSC_v3.41787,345,488 - 87,538,289 (-)RGD
Celera1775,557,867 - 75,746,355 (-)RGD
Sequence:
RefSeq Acc Id: XM_039096062   ⟹   XP_038951990
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81781,097,869 - 81,286,127 (-)NCBI
mRatBN7.21776,188,801 - 76,377,509 (-)NCBI
RefSeq Acc Id: XM_039096064   ⟹   XP_038951992
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81781,044,847 - 81,286,111 (-)NCBI
mRatBN7.21776,170,925 - 76,377,511 (-)NCBI
RefSeq Acc Id: XM_039096065   ⟹   XP_038951993
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81781,098,535 - 81,286,111 (-)NCBI
mRatBN7.21776,253,828 - 76,377,511 (-)NCBI
RefSeq Acc Id: XM_039096066   ⟹   XP_038951994
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81781,182,825 - 81,286,111 (-)NCBI
mRatBN7.21776,277,500 - 76,377,511 (-)NCBI
RefSeq Acc Id: XM_063276734   ⟹   XP_063132804
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81781,037,848 - 81,286,111 (-)NCBI
RefSeq Acc Id: XM_063276735   ⟹   XP_063132805
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81781,037,848 - 81,286,086 (-)NCBI
RefSeq Acc Id: XR_005495332
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81781,037,848 - 81,286,111 (-)NCBI
mRatBN7.21776,128,774 - 76,377,515 (-)NCBI
RefSeq Acc Id: XR_010058931
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81781,037,848 - 81,286,111 (-)NCBI
RefSeq Acc Id: NP_001102874   ⟸   NM_001109404
- UniProtKB: D4A8F2 (UniProtKB/TrEMBL),   A6JM38 (UniProtKB/TrEMBL),   A0A8I5ZQM5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000054637   ⟸   ENSRNOT00000057827
RefSeq Acc Id: XP_038951992   ⟸   XM_039096064
- Peptide Label: isoform X3
- UniProtKB: A0A8I5ZQM5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038951990   ⟸   XM_039096062
- Peptide Label: isoform X1
- UniProtKB: D4A8F2 (UniProtKB/TrEMBL),   A6JM38 (UniProtKB/TrEMBL),   A0A8I5ZQM5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038951993   ⟸   XM_039096065
- Peptide Label: isoform X4
- UniProtKB: A0A8I5ZQM5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038951994   ⟸   XM_039096066
- Peptide Label: isoform X5
- UniProtKB: A0A8I5ZQM5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000079328   ⟸   ENSRNOT00000119841
Ensembl Acc Id: ENSRNOP00000089680   ⟸   ENSRNOT00000111132
RefSeq Acc Id: XP_063132804   ⟸   XM_063276734
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZQM5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132805   ⟸   XM_063276735
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZQM5 (UniProtKB/TrEMBL)
Protein Domains
Disease resistance R13L4/SHOC-2-like LRR

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A8F2-F1-model_v2 AlphaFold D4A8F2 1-277 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700593
Promoter ID:EPDNEW_R11117
Type:single initiation site
Name:Rsu1_1
Description:Ras suppressor protein 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01780,576,951 - 80,577,011EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1591781 AgrOrtholog
BioCyc Gene G2FUF-8612 BioCyc
Ensembl Genes ENSRNOG00000017595 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000057827 ENTREZGENE
  ENSRNOT00000057827.6 UniProtKB/TrEMBL
  ENSRNOT00000119841 ENTREZGENE
  ENSRNOT00000119841.2 UniProtKB/TrEMBL
Gene3D-CATH 3.80.10.10 UniProtKB/TrEMBL
InterPro L_dom-like UniProtKB/TrEMBL
  Leu-rich_rpt UniProtKB/TrEMBL
  Leu-rich_rpt_typical-subtyp UniProtKB/TrEMBL
  LRR_domain-containing UniProtKB/TrEMBL
  LRR_R13L4/SHOC2-like UniProtKB/TrEMBL
KEGG Report rno:680419 UniProtKB/TrEMBL
NCBI Gene 680419 ENTREZGENE
PANTHER PTHR48051 UniProtKB/TrEMBL
  RAS SUPPRESSOR PROTEIN 1 UniProtKB/TrEMBL
Pfam LRR_14 UniProtKB/TrEMBL
  LRR_8 UniProtKB/TrEMBL
PhenoGen Rsu1 PhenoGen
PROSITE LRR UniProtKB/TrEMBL
RatGTEx ENSRNOG00000017595 RatGTEx
SMART LRR_BAC UniProtKB/TrEMBL
  LRR_TYP UniProtKB/TrEMBL
Superfamily-SCOP L domain-like UniProtKB/TrEMBL
UniProt A0A8I5ZQM5 ENTREZGENE, UniProtKB/TrEMBL
  A6JM38 ENTREZGENE, UniProtKB/TrEMBL
  D4A8F2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-05 Rsu1  Ras suppressor protein 1  LOC680419  similar to Ras suppressor protein 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC680419  similar to Ras suppressor protein 1      Symbol and Name status set to provisional 70820 PROVISIONAL