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Gene: Tut7 (terminal uridylyl transferase 7) Rattus norvegicus

Analyze

Symbol:

Tut7

Name:

terminal uridylyl transferase 7

RGD ID:

1586015

Description:

Predicted to enable RNA uridylyltransferase activity and miRNA binding activity. Predicted to be involved in RNA metabolic process; oocyte maturation; and transposable element silencing by mRNA destabilization. Predicted to be located in cytoplasm. Orthologous to human TUT7 (terminal uridylyl transferase 7); PARTICIPATES IN microRNA pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC501515; similar to Zinc finger CCHC domain-containing protein 6; terminal uridylyltransferase 7; Zcchc6; zinc finger CCHC-type containing 6; zinc finger, CCHC domain containing 6

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TUT7 (terminal uridylyl transferase 7)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Tut7 (terminal uridylyl transferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tut7 (terminal uridylyl transferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TUT7 (terminal uridylyl transferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TUT7 (terminal uridylyl transferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tut7 (terminal uridylyl transferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TUT7 (terminal uridylyl transferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TUT7 (terminal uridylyl transferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tut7 (terminal uridylyl transferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Tut7 (terminal uridylyl transferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	UGDH (UDP-glucose 6-dehydrogenase)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	TUT7 (terminal uridylyl transferase 7)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tut7 (terminal uridylyl transferase 7)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	cid-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	tut7	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	tut7	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	pup-2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	tut7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tut7	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	4,854,553 - 4,908,758 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	4,855,936 - 4,909,070 (+)	Ensembl				GRCr8
mRatBN7.2	17	4,849,287 - 4,903,542 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	4,849,283 - 4,903,169 (+)	Ensembl				mRatBN7.2
Rnor_6.0	17	5,225,854 - 5,279,674 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	5,225,835 - 5,271,794 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	7,451,199 - 7,505,016 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	10,752,875 - 10,806,477 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	4,970,855 - 5,024,770 (+)	NCBI		Celera
Cytogenetic Map	17	p14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

antimycin A (ISO)

antirheumatic drug (ISO)

arsenite(3-) (ISO)

atrazine (EXP,ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium dichloride (ISO)

chlorpyrifos (ISO)

clorgyline (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) chloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

diethylstilbestrol (ISO)

dioxygen (ISO)

elemental selenium (ISO)

fenthion (ISO)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

glafenine (EXP)

ketoconazole (ISO)

methapyrilene (EXP)

methidathion (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

methylparaben (ISO)

nefazodone (EXP)

nimesulide (EXP)

paracetamol (ISO)

pentachlorophenol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

picoxystrobin (ISO)

progesterone (ISO)

propiconazole (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

rotenone (ISO)

selenium atom (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

tebufenpyrad (ISO)

temozolomide (ISO)

testosterone (ISO)

thifluzamide (ISO)

thiram (ISO)

titanium dioxide (ISO)

torcetrapib (ISO)

trichloroethene (EXP)

tungsten (ISO)

urethane (ISO)

valproic acid (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

histone mRNA catabolic process (ISO)

miRNA metabolic process (IEA,ISO)

oocyte maturation (IEA,ISO)

polyuridylation-dependent mRNA catabolic process (IEA,ISO)

pre-miRNA processing (IEA,ISO)

RNA 3'-end processing (IBA,IEA,ISO)

RNA metabolic process (IEA)

transposable element silencing by mRNA destabilization (IEA,ISO)

Cellular Component

cytoplasm (IEA,ISO)

cytosol (IEA,ISO)

Molecular Function

metal ion binding (IEA)

miRNA binding (IEA,ISO)

nucleic acid binding (IEA)

nucleotidyltransferase activity (IEA)

protein binding (ISO)

RNA uridylyltransferase activity (IBA,IEA,ISO)

transferase activity (IEA)

uridylyltransferase activity (IEA,ISO)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

microRNA pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Comprehensive gene review and curation	RGD comprehensive gene curation
6.	The long and short of microRNA.	Yates LA, etal., Cell. 2013 Apr 25;153(3):516-9. doi: 10.1016/j.cell.2013.04.003.

Additional References at PubMed

PMID:17353264	PMID:18172165	PMID:22658674	PMID:22681889	PMID:25979828	PMID:28671666	PMID:28792939	PMID:30122351

Genomics

Comparative Map Data

Tut7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	4,854,553 - 4,908,758 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	4,855,936 - 4,909,070 (+)	Ensembl				GRCr8
mRatBN7.2	17	4,849,287 - 4,903,542 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	4,849,283 - 4,903,169 (+)	Ensembl				mRatBN7.2
Rnor_6.0	17	5,225,854 - 5,279,674 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	5,225,835 - 5,271,794 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	7,451,199 - 7,505,016 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	10,752,875 - 10,806,477 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	4,970,855 - 5,024,770 (+)	NCBI		Celera
Cytogenetic Map	17	p14	NCBI

TUT7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	86,287,733 - 86,354,410 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	86,287,725 - 86,354,541 (-)	Ensembl			hg38	GRCh38
GRCh37	9	88,902,648 - 88,969,325 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	88,092,468 - 88,159,189 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	9	86,132,203 - 86,198,923	NCBI
Celera	9	59,472,766 - 59,539,516 (-)	NCBI		Celera
Cytogenetic Map	9	q21.33	NCBI
HuRef	9	58,725,479 - 58,792,201 (-)	NCBI		HuRef
CHM1_1	9	89,049,089 - 89,115,852 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	98,438,962 - 98,505,744 (-)	NCBI		T2T-CHM13v2.0

Tut7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	59,919,690 - 59,971,060 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	59,919,375 - 59,970,961 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	59,771,876 - 59,823,169 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	59,771,561 - 59,823,147 (-)	Ensembl			mm10	GRCm38
MGSCv37	13	59,873,240 - 59,924,508 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	59,781,502 - 59,832,724 (-)	NCBI		MGSCv36	mm8
Celera	13	60,831,422 - 60,882,680 (-)	NCBI		Celera
Cytogenetic Map	13	B2	NCBI
cM Map	13	31.88	NCBI

Tut7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955432	1,268,103 - 1,329,436 (+)	Ensembl
ChiLan1.0	NW_004955432	1,268,217 - 1,330,385 (+)	NCBI	ChiLan1.0	ChiLan1.0

TUT7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	53,052,966 - 53,118,135 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	53,055,399 - 53,120,540 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	57,433,583 - 57,498,675 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	85,489,974 - 85,554,745 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	85,486,521 - 85,554,745 (-)	Ensembl			panPan2	panpan1.1

TUT7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	73,400,648 - 73,464,935 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	73,401,421 - 73,475,493 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	74,162,268 - 74,226,563 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	73,707,237 - 73,771,495 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	73,707,227 - 73,771,495 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	73,515,084 - 73,579,269 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	73,281,944 - 73,345,972 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	73,987,748 - 74,051,975 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tut7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	119,984,394 - 120,043,816 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936680	1,705,691 - 1,752,423 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936680	1,693,815 - 1,753,641 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TUT7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	28,995,565 - 29,061,176 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	10	28,995,564 - 29,061,179 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	33,038,194 - 33,103,962 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TUT7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	96,920,632 - 96,987,114 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	96,920,021 - 96,986,165 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	85,271,931 - 85,337,399 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tut7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624809	11,031,693 - 11,084,723 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624809	11,030,422 - 11,094,754 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Tut7
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	78,304,534 - 78,358,921 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Tut7
149 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	109
Count of miRNA genes:	92
Interacting mature miRNAs:	98
Transcripts:	ENSRNOT00000022373
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354613	Kidm14	Kidney mass QTL 14	6.2		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	17	1	36045694	Rat
1354581	Bp247	Blood pressure QTL 247	4.5		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	17	1	43999106	Rat
2293664	Bmd28	Bone mineral density QTL 28	5.1	0.0001	femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	17	4360057	27233623	Rat
2324619	Coatc4	Coat color QTL 4		0.001	coat/hair pigmentation trait (VT:0010463)	pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)	17	1	21499218	Rat
1300123	Bp194	Blood pressure QTL 194	2.82		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	2120843	42054133	Rat
2303627	Vencon8	Ventilatory control QTL 8		0.001	respiration trait (VT:0001943)	tidal volume (CMO:0000222)	17	4733534	49733534	Rat
631207	Niddm41	Non-insulin dependent diabetes mellitus QTL 41			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	17	1	38037084	Rat
10401807	Kidm52	Kidney mass QTL 52			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	17	1	31706603	Rat
10054088	Scort28	Serum corticosterone level QTL 28	2.04	0.0102	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	4733534	49733534	Rat
1354662	Rf49	Renal function QTL 49	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	17	1	43999106	Rat
2293648	Bmd31	Bone mineral density QTL 31	4.5	0.0001	femur size trait (VT:1000369)	femoral neck cortical cross-sectional area (CMO:0001702)	17	4360057	27233623	Rat
1354658	Spl8	Serum phospholipid level QTL 8	3.8		blood VLDL phospholipid amount (VT:0010507)	blood very low density lipoprotein phospholipid level (CMO:0001571)	17	1	43999106	Rat
1641902	Colcr7	Colorectal carcinoma resistance QTL 7	3.35	0.0044	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	17	2120843	22087569	Rat
1549900	Iddm20	Insulin dependent diabetes mellitus QTL 20	3.7		pancreas integrity trait (VT:0010560)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	17	1	22181410	Rat
9590316	Scort21	Serum corticosterone level QTL 21	4.75	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	1	22877318	Rat

Markers in Region

RH127389

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	4,902,707 - 4,902,887 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	5,279,144 - 5,279,323	NCBI	Rnor6.0
Rnor_5.0	17	7,504,486 - 7,504,665	UniSTS	Rnor5.0
RGSC_v3.4	17	10,806,383 - 10,806,562	UniSTS	RGSC3.4
Celera	17	5,024,240 - 5,024,419	UniSTS
RH 3.4 Map	17	72.8	UniSTS
Cytogenetic Map	17	p14	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096243	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276709	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276711	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000022373 ⟹ ENSRNOP00000022373

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	4,855,936 - 4,909,070 (+)	Ensembl
mRatBN7.2 Ensembl	17	4,849,283 - 4,903,025 (+)	Ensembl
Rnor_6.0 Ensembl	17	5,225,835 - 5,271,794 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117724 ⟹ ENSRNOP00000093045

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	4,855,936 - 4,900,732 (+)	Ensembl
mRatBN7.2 Ensembl	17	4,849,310 - 4,903,025 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000120026 ⟹ ENSRNOP00000085565

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	4,855,936 - 4,908,755 (+)	Ensembl
mRatBN7.2 Ensembl	17	4,849,283 - 4,903,169 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000133368 ⟹ ENSRNOP00000110727

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	4,855,936 - 4,908,069 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000152148 ⟹ ENSRNOP00000111043

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	4,855,936 - 4,898,789 (+)	Ensembl

RefSeq Acc Id:

NM_001427031 ⟹ NP_001413960

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,919 - 4,908,758 (+)	NCBI

RefSeq Acc Id:

XM_006253531 ⟹ XP_006253593

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,553 - 4,900,694 (+)	NCBI
mRatBN7.2	17	4,849,417 - 4,895,137 (+)	NCBI
Rnor_6.0	17	5,226,066 - 5,271,573 (+)	NCBI
Rnor_5.0	17	7,451,199 - 7,505,016 (+)	NCBI

Sequence:

show sequence

TGGCGCCGTCCTTCTCCGGCCGCCTCGGCTGGGCTGCGCGCCCGGAGCTCTCGGGTTCGAGTCC
GTGTCTTCACTTTGTGTCGGGGCTCCGGCCCTGGTCCGGGGGACCCCGGAACCCTGTCAATGGC
CGGGCGCTTCCTGCTTCCTATTCCCCACGGCGGCTTCGTGGCCAGTAGCGCGGGACCGCCTCCT
CCTCCTCCGCCTGGGGACTCCGCTTGTGGAAACTGAGGCACACAGGGGTGGGGCAGCCGAATGG
GGAAGGAAAAGGAGTGTCATTCTGCGGAGGATTGTGGTTGGTGACGAAACTGGACTTGGCAGGG
GCTGGGGACTAAGAAACCCGGTACGAAGTAAGAAAGTTGAAGTCATAGACCATGGGAGATACAG
CAAAGCCTTATTTTGTGAAGCGCACTAAAGACCGTGGAATTATTGATGATGATGATTTCAGAAG
GGGTCACCCCCAACAAGATTATTTAATGATGGATGATTATGCTAAAGGCCATAGCAGTAAAATG
GAAAAGGGCCTTCCAAAAAAAAAGATGTCCCCTGGGAACTATGGGAACACCCCCAGGAAAGGAC
TGTATGCGGTCTCCAGCAACCCATATGCATTTAAAAACCCGATGTACAGTCAGCCTGCTTGGAT
GAACGATAACCACAAAGATCAGAATAAGAAATGGCTGTCTGATGAACTGGCTGGAAATGCAGAT
AGCTGGAGAGAGTTCAAGCCTGGACCTAGGATTCCCGTCCTAAGCCGGTCAAGGAAAGAATCCT
TTCAAGAAAGTGAAGACACCTACAGGTGGCCAGAGGGGAGAGGCTGCAGAGCAGTGAGAAGGCT
GTTTCAGAAAGACCTCGCCAGCCTAGAAGCCATGACAGAAGTGGAAGCAGGAAGCCCTGAAAAC
AAGAAACAGCGGTCCAGACCTCGTAAGCCACGGAGGACTAGAACGGAGGACATTGAGCAGGACG
GAGAGTTAGAAGGTCCTGTGATCGACGAGTCCGTCCTTTCAACCAAGGAGTTGCTGGGCCTACA
GCAGGCTGAGGAGCGGCTCAAGAGAGACTGCATTGAGAGACTGAAAAGGCGATCACGAAATTGC
CCAACAGCAAAGTACACCTGTAAACTGTGCGATGCCTTGATTGACTCCATCCCGTTCGCACATA
AGCACATCAAGGAGAAGAGGCACAAGAAGAACCTTAAGGAAAAGCAGGAAGAAGAATTGCTTAC
CACACTGCCCCCACCAGCACCCTCCCAGATACATGCAGTCGGCAGCGCCATTGACAGAGTGGTG
CAGGAGTTTGGTTTACACAATGAAAACTTGGATCAGAGGCTAGAAATTAAGTGTGCCATGGAAA
ACGTGTTCCAGCACAAACTACCAGACTGTTCTCTTAGGCTTTATGGATCGTCCTGTAGCAGGCT
GGGCTTCAGAGACTCTGATGTGAACATTGATGTTCAGTTTCCAGCTGTCATGTCTCAGCCAGAT
GTCCTCTTACTTGTTCAAGAATGTTTAAAGAACAGTGACTGCTTCATTGATGTTGATGCTGATT
TCCATGCCCGGGTTCCTGTGGTGGTATGCAGACATAAGCAAAGTGGCCTTCTTTGTAAAGTAAG
TGCAGGAAACGAAAACGCCTGGCTGACCACAAAGCATCTAACGGCTCTTGGAAAACTGGAGCCA
AGGCTGCTTCCTCTGGTGATTGCGTTTAGATACTGGGCAAAGCTTTGTAGCATCGATCGCCCTG
AAGAAGGAGGCCTGCCGCCATATGTGTTTGCTCTGATGGCTGTTTTCTTCCTTCAGCAAAGAAA
AGAACCTCTCTTGCCAGTTTATCTAGGATCATGGATTGAAGAATTCTCATTAAATAAATTAGGG
AATTTCAGCCTTAAAGACGTGGAGAAAGATTCTGTGGTCTGGGAGTACACTGACAACAGCACAG
GGGACACCAGCTCGCCAAAAGAGGAAGCACTCAGAGAGACGGCAGCAAAGAAGGGGCAGGTGCC
ATTGACATTTAATATAAAACATCAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTG
CGGTTCTATGCTTTAGAGTTTAATCTGGCTGACTTAGTGATCAGTATTCGTGTCAAAGAATTGA
TATCACGGGAATCAAAGGACTGGCCCAAAAAGCGCATCGCGATTGAAGACCCCTATTCTGTTAA
AAGAAACGTGGCAAGGACCTTGAATAACCAACCTGTGTTTGAGTACATACTTCATTGTCTGAGG
ACGACATATAAATATTTCGCTCTTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCTA
GCCCAATCATCTGTGCTTCAGATCCTTATAAAGAAGCGAAAAATTGTGGCCCAGAGCTCCAAGT
GACAAATATTGATAAACTGGAAAATGCACTTGTGGCTCCAGATCCTGGCGTTCAAACCTCAGGT
TCCTGCAGGGCACAGCCACTTACTTTTAAAAAAACCACCGAGGAGCTGGGAAGCCCATCAAAGG
AGACGATCAGAGGTGTCCACATTCCAGTCCACCAGGAAAGCTCTGGCTGTGTCCAGGCAGAGGC
CAGTTATGAGGGGTTTAAGGATGCCACAGCAGAGCAACAGGAAGCAGGAAGTGACAGCGAGAAC
AGCAGAAGGAAGACCAAGCATCTTTTGAGCACTGATGACCAAGGTTTAAGCAGCAGCAAGCACC
CAGAACTTCAGAACTGTGGCAGCCTCTGTGGTCTCCAGGCAGACAACACTTTGGAATTAGTAGG
GCTTCGGAATCCTGGGGCTGAAAAGTGTAGCAGCTTTGCCTCTTTGGATGACAAGGCTGATGTC
AATGAAAGAAGCACAGAAGGTGCCGATGAACGAGGAGAAGCTCTGAATTGCTTTTCCCCTTCAG
TCCAGAGCTGCACATCAGCAACCATGCACTTTGATGAGGAGGAGGAGGAGGAAGAAGAAGAAGA
GGAGGAGGAAGAGGAAGAGGAGGAGCCCAGGCTCAGAACTAATCTTACAGAAGATGAGGAGGGG
GTTGCTAGTGAAAATCAGGTGGACAGCAGGTATACTGGGTCAGGTGAGGACGCCCTCTCTGAAG
ACGATGATTTGGCTGAGCCTGCTAAGGGTGAAGACCTGGAAGAAAGTGGAGAACACATGGGTGG
GGCTCTGCTCATAGACCTAAATAGAATAACTCTTAAAGAAGAAAGTTTTTTTGAGGAAAATTCA
CCTGGGGACCAGTCTGAGTTCTTCTATGAATTTAGGAAACTGACCTTCACCAAAGGCAAGTCTC
CCACAGTAGTGTGCAGCTTGTGTAAGCGAGAGGGTCACCTAAAGAAGGACTGTCCTGAGGACTT
CAAGAGGATCCAGCTGGAACCTTTGCCACCCCTGACACCCAAGTTCTCAAATATCTTAGATCAA
GTGTGCATCCAGTGTTACAAGGATTTCTCTCCAACCATTGTAGAAGATCAGGCTCGCGAACATA
TCCGGCAAAATCTAGAAAGTTTCATAAAACAGGATTTTCCAGGAACTAAATTGAGCTTGTTTGG
CTCCTCCAAAAATGGATTTGGGTTCAAACAGAGTGACCTTGACGTCTGTATGACGATTAACGGA
CATGAGACTGCTGAGGGGTTGGACTGTGTGAGAACTATTGAAGAACTGGCACGGGTCCTCAGAA
AGCACTCAGGACTGAGGAACATCCTGCCCATCACAACAGCCAAGGTGCCCATCGTGAAGTTCTC
CCATCTGAGAAGCGGGCTGGAGGTGGACATCAGTCTGTATAACACACTGGCTCTTCACAACACG
CGGCTCCTGTTTGCATACTCAGCCATTGACCCCAGAGTGAAATACCTGTGCTACACCATGAAAG
TGTTCACAAAGATGTGTGACATCGGTGACGCGTCCAGAGGCAGCTTGTCATCATACGCTTACAC
TCTTATGGTGCTGTACTTCCTCCAGCAGCGGTCCCCCCCTGTCATCCCTGTGCTTCAGGAGATA
TACAAAGGTGAAAAGAAACCAGAAATACTTGTTGATGGCTGGAATATCTACTTTTTCGATCAAA
TAAATGAACTGCCCACTTGTTGGCCAGAATATGGAAAAAATACAGAATCTGTTGGGCAGCTGTG
GTTGGGACTTCTACGCTTCTACACTGAGGAGTTTGACTTTAAGGAACACGTAATCAGCATCAGA
AGAAAAAGTCTGCTTACAACTTTTAAGAAACAGTGGACCTCAAAATACATCGTCATTGAAGATC
CCTTTGATTTGAACCACAATCTTGGTGCTGGATTATCAAGGAAAATGACAAATTTTATAATGAA
AGCTTTTATCAATGGTAGAAGAGTATTTGGAATTCCAGTCAAAGGATTTCCAAAGGACATCCTG
GCATACTTCTTTGATCCGGATGTCCTGACTGAGGGAGAACTGGCCCCAAATGACAGGTGCTGCC
GGATCTGTGGGAAAATTGGCCACTTCATGAAGGACTGTCCCATGAGGAGAAAAGTGAGGCGGCG
GCGAGACCAGGAAGATACCCCAAACCAAAGGTACACAGAGAGCAAAGAAAAAAGAAGCAAAGAG
GACAAAGAAATTCAGAACAAGTACACAGAAAAGGAAGTGTCAGCAAAAGAAGACAAGGCTGCAC
CGTGCACAGCTGCCAAAGCCAAGCCAATGAGGGCAGCTGTTGACCTGGGCCGGGAGAAACTTGT
CAGGACACCAGCCGAAAAGTGGAAGAGACAGGATGACAGAGACTCAAGAGAAAAGCGCTGTTTC
ATCTGTGGAAGAGAGGGACACATTAAAAAGGAATGCCCACAATTCAAAGGCTCTCCAGGTTTGT
GTAAGTCTGATTATGTGTCTTCGTATTCTTCACCTACCCCTTTGAGACCAGTTGCTCAGGTAAA
AGCCAGCCCAAACCTGAGAGGAGAGCTCCTCCATCCTCTTCACTCCCCACAGCCTTCTGGAGTG
CTTGCAGCTGTGTGCTGGGCCCTCCTGGCTGGCCTCTGGTGCTTACTCCTTCTGTGTCCCACAT
ACTATGTGGTAAGGCTTATTGGGCCCTGGTAGTAGGGGCTTGGTAGATGGCTCCTGCATACATG
TCTGTCTTTCCAACTAACATGCAAACTTGTGCCACGCGTGTGCCTAATCCCAGCCCTTCTTGGA
TACAGTTTGAGGCTGTTTCTGTTGGTTTTACCTTCAGTTTTTGTAAACCAGTCTATTTCATT

hide sequence

RefSeq Acc Id:

XM_006253532 ⟹ XP_006253594

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,917 - 4,900,694 (+)	NCBI
mRatBN7.2	17	4,849,395 - 4,895,137 (+)	NCBI
Rnor_6.0	17	5,225,869 - 5,271,573 (+)	NCBI
Rnor_5.0	17	7,451,199 - 7,505,016 (+)	NCBI

Sequence:

show sequence

CGCTGAGCGCCGGAAGTGGGGCCGAAGGAAAACACGGAGAGGAGCCGGGCCCGGACAGGAAGCG
GCGGGGGACCGCAGCGGCGCTGGTGAGTGCTCCCGGGCGCCGTCTCGTCGCGTCCCTCCGGGAC
TCGCCTCCGGGCTGGGCCCGTGGGTTCCCCCCGCCCCGAGGAGCGTATCTGCCCGGCCCCGAGG
TACGAAGTAAGAAAGTTGAAGTCATAGACCATGGGAGATACAGCAAAGCCTTATTTTGTGAAGC
GCACTAAAGACCGTGGAATTATTGATGATGATGATTTCAGAAGGGGTCACCCCCAACAAGATTA
TTTAATGATGGATGATTATGCTAAAGGCCATAGCAGTAAAATGGAAAAGGGCCTTCCAAAAAAA
AAGATGTCCCCTGGGAACTATGGGAACACCCCCAGGAAAGGACTGTATGCGGTCTCCAGCAACC
CATATGCATTTAAAAACCCGATGTACAGTCAGCCTGCTTGGATGAACGATAACCACAAAGATCA
GAATAAGAAATGGCTGTCTGATGAACTGGCTGGAAATGCAGATAGCTGGAGAGAGTTCAAGCCT
GGACCTAGGATTCCCGTCCTAAGCCGGTCAAGGAAAGAATCCTTTCAAGAAAGTGAAGACACCT
ACAGGTGGCCAGAGGGGAGAGGCTGCAGAGCAGTGAGAAGGCTGTTTCAGAAAGACCTCGCCAG
CCTAGAAGCCATGACAGAAGTGGAAGCAGGAAGCCCTGAAAACAAGAAACAGCGGTCCAGACCT
CGTAAGCCACGGAGGACTAGAACGGAGGACATTGAGCAGGACGGAGAGTTAGAAGGTCCTGTGA
TCGACGAGTCCGTCCTTTCAACCAAGGAGTTGCTGGGCCTACAGCAGGCTGAGGAGCGGCTCAA
GAGAGACTGCATTGAGAGACTGAAAAGGCGATCACGAAATTGCCCAACAGCAAAGTACACCTGT
AAACTGTGCGATGCCTTGATTGACTCCATCCCGTTCGCACATAAGCACATCAAGGAGAAGAGGC
ACAAGAAGAACCTTAAGGAAAAGCAGGAAGAAGAATTGCTTACCACACTGCCCCCACCAGCACC
CTCCCAGATACATGCAGTCGGCAGCGCCATTGACAGAGTGGTGCAGGAGTTTGGTTTACACAAT
GAAAACTTGGATCAGAGGCTAGAAATTAAGTGTGCCATGGAAAACGTGTTCCAGCACAAACTAC
CAGACTGTTCTCTTAGGCTTTATGGATCGTCCTGTAGCAGGCTGGGCTTCAGAGACTCTGATGT
GAACATTGATGTTCAGTTTCCAGCTGTCATGTCTCAGCCAGATGTCCTCTTACTTGTTCAAGAA
TGTTTAAAGAACAGTGACTGCTTCATTGATGTTGATGCTGATTTCCATGCCCGGGTTCCTGTGG
TGGTATGCAGACATAAGCAAAGTGGCCTTCTTTGTAAAGTAAGTGCAGGAAACGAAAACGCCTG
GCTGACCACAAAGCATCTAACGGCTCTTGGAAAACTGGAGCCAAGGCTGCTTCCTCTGGTGATT
GCGTTTAGATACTGGGCAAAGCTTTGTAGCATCGATCGCCCTGAAGAAGGAGGCCTGCCGCCAT
ATGTGTTTGCTCTGATGGCTGTTTTCTTCCTTCAGCAAAGAAAAGAACCTCTCTTGCCAGTTTA
TCTAGGATCATGGATTGAAGAATTCTCATTAAATAAATTAGGGAATTTCAGCCTTAAAGACGTG
GAGAAAGATTCTGTGGTCTGGGAGTACACTGACAACAGCACAGGGGACACCAGCTCGCCAAAAG
AGGAAGCACTCAGAGAGACGGCAGCAAAGAAGGGGCAGGTGCCATTGACATTTAATATAAAACA
TCAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTGCGGTTCTATGCTTTAGAGTTT
AATCTGGCTGACTTAGTGATCAGTATTCGTGTCAAAGAATTGATATCACGGGAATCAAAGGACT
GGCCCAAAAAGCGCATCGCGATTGAAGACCCCTATTCTGTTAAAAGAAACGTGGCAAGGACCTT
GAATAACCAACCTGTGTTTGAGTACATACTTCATTGTCTGAGGACGACATATAAATATTTCGCT
CTTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCTAGCCCAATCATCTGTGCTTCAG
ATCCTTATAAAGAAGCGAAAAATTGTGGCCCAGAGCTCCAAGTGACAAATATTGATAAACTGGA
AAATGCACTTGTGGCTCCAGATCCTGGCGTTCAAACCTCAGGTTCCTGCAGGGCACAGCCACTT
ACTTTTAAAAAAACCACCGAGGAGCTGGGAAGCCCATCAAAGGAGACGATCAGAGGTGTCCACA
TTCCAGTCCACCAGGAAAGCTCTGGCTGTGTCCAGGCAGAGGCCAGTTATGAGGGGTTTAAGGA
TGCCACAGCAGAGCAACAGGAAGCAGGAAGTGACAGCGAGAACAGCAGAAGGAAGACCAAGCAT
CTTTTGAGCACTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAGAACTTCAGAACTGTGGCA
GCCTCTGTGGTCTCCAGGCAGACAACACTTTGGAATTAGTAGGGCTTCGGAATCCTGGGGCTGA
AAAGTGTAGCAGCTTTGCCTCTTTGGATGACAAGGCTGATGTCAATGAAAGAAGCACAGAAGGT
GCCGATGAACGAGGAGAAGCTCTGAATTGCTTTTCCCCTTCAGTCCAGAGCTGCACATCAGCAA
CCATGCACTTTGATGAGGAGGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAAGAGGAAGAGGA
GGAGCCCAGGCTCAGAACTAATCTTACAGAAGATGAGGAGGGGGTTGCTAGTGAAAATCAGGTG
GACAGCAGGTATACTGGGTCAGGTGAGGACGCCCTCTCTGAAGACGATGATTTGGCTGAGCCTG
CTAAGGGTGAAGACCTGGAAGAAAGTGGAGAACACATGGGTGGGGCTCTGCTCATAGACCTAAA
TAGAATAACTCTTAAAGAAGAAAGTTTTTTTGAGGAAAATTCACCTGGGGACCAGTCTGAGTTC
TTCTATGAATTTAGGAAACTGACCTTCACCAAAGGCAAGTCTCCCACAGTAGTGTGCAGCTTGT
GTAAGCGAGAGGGTCACCTAAAGAAGGACTGTCCTGAGGACTTCAAGAGGATCCAGCTGGAACC
TTTGCCACCCCTGACACCCAAGTTCTCAAATATCTTAGATCAAGTGTGCATCCAGTGTTACAAG
GATTTCTCTCCAACCATTGTAGAAGATCAGGCTCGCGAACATATCCGGCAAAATCTAGAAAGTT
TCATAAAACAGGATTTTCCAGGAACTAAATTGAGCTTGTTTGGCTCCTCCAAAAATGGATTTGG
GTTCAAACAGAGTGACCTTGACGTCTGTATGACGATTAACGGACATGAGACTGCTGAGGGGTTG
GACTGTGTGAGAACTATTGAAGAACTGGCACGGGTCCTCAGAAAGCACTCAGGACTGAGGAACA
TCCTGCCCATCACAACAGCCAAGGTGCCCATCGTGAAGTTCTCCCATCTGAGAAGCGGGCTGGA
GGTGGACATCAGTCTGTATAACACACTGGCTCTTCACAACACGCGGCTCCTGTTTGCATACTCA
GCCATTGACCCCAGAGTGAAATACCTGTGCTACACCATGAAAGTGTTCACAAAGATGTGTGACA
TCGGTGACGCGTCCAGAGGCAGCTTGTCATCATACGCTTACACTCTTATGGTGCTGTACTTCCT
CCAGCAGCGGTCCCCCCCTGTCATCCCTGTGCTTCAGGAGATATACAAAGGTGAAAAGAAACCA
GAAATACTTGTTGATGGCTGGAATATCTACTTTTTCGATCAAATAAATGAACTGCCCACTTGTT
GGCCAGAATATGGAAAAAATACAGAATCTGTTGGGCAGCTGTGGTTGGGACTTCTACGCTTCTA
CACTGAGGAGTTTGACTTTAAGGAACACGTAATCAGCATCAGAAGAAAAAGTCTGCTTACAACT
TTTAAGAAACAGTGGACCTCAAAATACATCGTCATTGAAGATCCCTTTGATTTGAACCACAATC
TTGGTGCTGGATTATCAAGGAAAATGACAAATTTTATAATGAAAGCTTTTATCAATGGTAGAAG
AGTATTTGGAATTCCAGTCAAAGGATTTCCAAAGGACATCCTGGCATACTTCTTTGATCCGGAT
GTCCTGACTGAGGGAGAACTGGCCCCAAATGACAGGTGCTGCCGGATCTGTGGGAAAATTGGCC
ACTTCATGAAGGACTGTCCCATGAGGAGAAAAGTGAGGCGGCGGCGAGACCAGGAAGATACCCC
AAACCAAAGGTACACAGAGAGCAAAGAAAAAAGAAGCAAAGAGGACAAAGAAATTCAGAACAAG
TACACAGAAAAGGAAGTGTCAGCAAAAGAAGACAAGGCTGCACCGTGCACAGCTGCCAAAGCCA
AGCCAATGAGGGCAGCTGTTGACCTGGGCCGGGAGAAACTTGTCAGGACACCAGCCGAAAAGTG
GAAGAGACAGGATGACAGAGACTCAAGAGAAAAGCGCTGTTTCATCTGTGGAAGAGAGGGACAC
ATTAAAAAGGAATGCCCACAATTCAAAGGCTCTCCAGGTTTGTGTAAGTCTGATTATGTGTCTT
CGTATTCTTCACCTACCCCTTTGAGACCAGTTGCTCAGGTAAAAGCCAGCCCAAACCTGAGAGG
AGAGCTCCTCCATCCTCTTCACTCCCCACAGCCTTCTGGAGTGCTTGCAGCTGTGTGCTGGGCC
CTCCTGGCTGGCCTCTGGTGCTTACTCCTTCTGTGTCCCACATACTATGTGGTAAGGCTTATTG
GGCCCTGGTAGTAGGGGCTTGGTAGATGGCTCCTGCATACATGTCTGTCTTTCCAACTAACATG
CAAACTTGTGCCACGCGTGTGCCTAATCCCAGCCCTTCTTGGATACAGTTTGAGGCTGTTTCTG
TTGGTTTTACCTTCAGTTTTTGTAAACCAGTCTATTTCATT

hide sequence

RefSeq Acc Id:

XM_006253533 ⟹ XP_006253595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,790 - 4,900,694 (+)	NCBI
mRatBN7.2	17	4,849,287 - 4,895,137 (+)	NCBI
Rnor_6.0	17	5,225,854 - 5,271,573 (+)	NCBI
Rnor_5.0	17	7,451,199 - 7,505,016 (+)	NCBI

Sequence:

show sequence

CGCACAATGAGACGGCGCTGAGCGCCGGAAGTGGGGCCGAAGGAAAACACGGAGAGGAGCCGGG
CCCGGACAGGAAGCGGCGGGGGACCGCAGCGGCGCTGGTACGAAGTAAGAAAGTTGAAGTCATA
GACCATGGGAGATACAGCAAAGCCTTATTTTGTGAAGCGCACTAAAGACCGTGGAATTATTGAT
GATGATGATTTCAGAAGGGGTCACCCCCAACAAGATTATTTAATGATGGATGATTATGCTAAAG
GCCATAGCAGTAAAATGGAAAAGGGCCTTCCAAAAAAAAAGATGTCCCCTGGGAACTATGGGAA
CACCCCCAGGAAAGGACTGTATGCGGTCTCCAGCAACCCATATGCATTTAAAAACCCGATGTAC
AGTCAGCCTGCTTGGATGAACGATAACCACAAAGATCAGAATAAGAAATGGCTGTCTGATGAAC
TGGCTGGAAATGCAGATAGCTGGAGAGAGTTCAAGCCTGGACCTAGGATTCCCGTCCTAAGCCG
GTCAAGGAAAGAATCCTTTCAAGAAAGTGAAGACACCTACAGGTGGCCAGAGGGGAGAGGCTGC
AGAGCAGTGAGAAGGCTGTTTCAGAAAGACCTCGCCAGCCTAGAAGCCATGACAGAAGTGGAAG
CAGGAAGCCCTGAAAACAAGAAACAGCGGTCCAGACCTCGTAAGCCACGGAGGACTAGAACGGA
GGACATTGAGCAGGACGGAGAGTTAGAAGGTCCTGTGATCGACGAGTCCGTCCTTTCAACCAAG
GAGTTGCTGGGCCTACAGCAGGCTGAGGAGCGGCTCAAGAGAGACTGCATTGAGAGACTGAAAA
GGCGATCACGAAATTGCCCAACAGCAAAGTACACCTGTAAACTGTGCGATGCCTTGATTGACTC
CATCCCGTTCGCACATAAGCACATCAAGGAGAAGAGGCACAAGAAGAACCTTAAGGAAAAGCAG
GAAGAAGAATTGCTTACCACACTGCCCCCACCAGCACCCTCCCAGATACATGCAGTCGGCAGCG
CCATTGACAGAGTGGTGCAGGAGTTTGGTTTACACAATGAAAACTTGGATCAGAGGCTAGAAAT
TAAGTGTGCCATGGAAAACGTGTTCCAGCACAAACTACCAGACTGTTCTCTTAGGCTTTATGGA
TCGTCCTGTAGCAGGCTGGGCTTCAGAGACTCTGATGTGAACATTGATGTTCAGTTTCCAGCTG
TCATGTCTCAGCCAGATGTCCTCTTACTTGTTCAAGAATGTTTAAAGAACAGTGACTGCTTCAT
TGATGTTGATGCTGATTTCCATGCCCGGGTTCCTGTGGTGGTATGCAGACATAAGCAAAGTGGC
CTTCTTTGTAAAGTAAGTGCAGGAAACGAAAACGCCTGGCTGACCACAAAGCATCTAACGGCTC
TTGGAAAACTGGAGCCAAGGCTGCTTCCTCTGGTGATTGCGTTTAGATACTGGGCAAAGCTTTG
TAGCATCGATCGCCCTGAAGAAGGAGGCCTGCCGCCATATGTGTTTGCTCTGATGGCTGTTTTC
TTCCTTCAGCAAAGAAAAGAACCTCTCTTGCCAGTTTATCTAGGATCATGGATTGAAGAATTCT
CATTAAATAAATTAGGGAATTTCAGCCTTAAAGACGTGGAGAAAGATTCTGTGGTCTGGGAGTA
CACTGACAACAGCACAGGGGACACCAGCTCGCCAAAAGAGGAAGCACTCAGAGAGACGGCAGCA
AAGAAGGGGCAGGTGCCATTGACATTTAATATAAAACATCAGCCTTCAGTGCCAGTCGGGCAAC
TCTGGGTGGAATTGCTGCGGTTCTATGCTTTAGAGTTTAATCTGGCTGACTTAGTGATCAGTAT
TCGTGTCAAAGAATTGATATCACGGGAATCAAAGGACTGGCCCAAAAAGCGCATCGCGATTGAA
GACCCCTATTCTGTTAAAAGAAACGTGGCAAGGACCTTGAATAACCAACCTGTGTTTGAGTACA
TACTTCATTGTCTGAGGACGACATATAAATATTTCGCTCTTCCACACAAAGTTACAAAACCCAA
CCTCACAAAGCCTCCTAGCCCAATCATCTGTGCTTCAGATCCTTATAAAGAAGCGAAAAATTGT
GGCCCAGAGCTCCAAGTGACAAATATTGATAAACTGGAAAATGCACTTGTGGCTCCAGATCCTG
GCGTTCAAACCTCAGGTTCCTGCAGGGCACAGCCACTTACTTTTAAAAAAACCACCGAGGAGCT
GGGAAGCCCATCAAAGGAGACGATCAGAGGTGTCCACATTCCAGTCCACCAGGAAAGCTCTGGC
TGTGTCCAGGCAGAGGCCAGTTATGAGGGGTTTAAGGATGCCACAGCAGAGCAACAGGAAGCAG
GAAGTGACAGCGAGAACAGCAGAAGGAAGACCAAGCATCTTTTGAGCACTGATGACCAAGGTTT
AAGCAGCAGCAAGCACCCAGAACTTCAGAACTGTGGCAGCCTCTGTGGTCTCCAGGCAGACAAC
ACTTTGGAATTAGTAGGGCTTCGGAATCCTGGGGCTGAAAAGTGTAGCAGCTTTGCCTCTTTGG
ATGACAAGGCTGATGTCAATGAAAGAAGCACAGAAGGTGCCGATGAACGAGGAGAAGCTCTGAA
TTGCTTTTCCCCTTCAGTCCAGAGCTGCACATCAGCAACCATGCACTTTGATGAGGAGGAGGAG
GAGGAAGAAGAAGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGCCCAGGCTCAGAACTAATCTTA
CAGAAGATGAGGAGGGGGTTGCTAGTGAAAATCAGGTGGACAGCAGGTATACTGGGTCAGGTGA
GGACGCCCTCTCTGAAGACGATGATTTGGCTGAGCCTGCTAAGGGTGAAGACCTGGAAGAAAGT
GGAGAACACATGGGTGGGGCTCTGCTCATAGACCTAAATAGAATAACTCTTAAAGAAGAAAGTT
TTTTTGAGGAAAATTCACCTGGGGACCAGTCTGAGTTCTTCTATGAATTTAGGAAACTGACCTT
CACCAAAGGCAAGTCTCCCACAGTAGTGTGCAGCTTGTGTAAGCGAGAGGGTCACCTAAAGAAG
GACTGTCCTGAGGACTTCAAGAGGATCCAGCTGGAACCTTTGCCACCCCTGACACCCAAGTTCT
CAAATATCTTAGATCAAGTGTGCATCCAGTGTTACAAGGATTTCTCTCCAACCATTGTAGAAGA
TCAGGCTCGCGAACATATCCGGCAAAATCTAGAAAGTTTCATAAAACAGGATTTTCCAGGAACT
AAATTGAGCTTGTTTGGCTCCTCCAAAAATGGATTTGGGTTCAAACAGAGTGACCTTGACGTCT
GTATGACGATTAACGGACATGAGACTGCTGAGGGGTTGGACTGTGTGAGAACTATTGAAGAACT
GGCACGGGTCCTCAGAAAGCACTCAGGACTGAGGAACATCCTGCCCATCACAACAGCCAAGGTG
CCCATCGTGAAGTTCTCCCATCTGAGAAGCGGGCTGGAGGTGGACATCAGTCTGTATAACACAC
TGGCTCTTCACAACACGCGGCTCCTGTTTGCATACTCAGCCATTGACCCCAGAGTGAAATACCT
GTGCTACACCATGAAAGTGTTCACAAAGATGTGTGACATCGGTGACGCGTCCAGAGGCAGCTTG
TCATCATACGCTTACACTCTTATGGTGCTGTACTTCCTCCAGCAGCGGTCCCCCCCTGTCATCC
CTGTGCTTCAGGAGATATACAAAGGTGAAAAGAAACCAGAAATACTTGTTGATGGCTGGAATAT
CTACTTTTTCGATCAAATAAATGAACTGCCCACTTGTTGGCCAGAATATGGAAAAAATACAGAA
TCTGTTGGGCAGCTGTGGTTGGGACTTCTACGCTTCTACACTGAGGAGTTTGACTTTAAGGAAC
ACGTAATCAGCATCAGAAGAAAAAGTCTGCTTACAACTTTTAAGAAACAGTGGACCTCAAAATA
CATCGTCATTGAAGATCCCTTTGATTTGAACCACAATCTTGGTGCTGGATTATCAAGGAAAATG
ACAAATTTTATAATGAAAGCTTTTATCAATGGTAGAAGAGTATTTGGAATTCCAGTCAAAGGAT
TTCCAAAGGACATCCTGGCATACTTCTTTGATCCGGATGTCCTGACTGAGGGAGAACTGGCCCC
AAATGACAGGTGCTGCCGGATCTGTGGGAAAATTGGCCACTTCATGAAGGACTGTCCCATGAGG
AGAAAAGTGAGGCGGCGGCGAGACCAGGAAGATACCCCAAACCAAAGGTACACAGAGAGCAAAG
AAAAAAGAAGCAAAGAGGACAAAGAAATTCAGAACAAGTACACAGAAAAGGAAGTGTCAGCAAA
AGAAGACAAGGCTGCACCGTGCACAGCTGCCAAAGCCAAGCCAATGAGGGCAGCTGTTGACCTG
GGCCGGGAGAAACTTGTCAGGACACCAGCCGAAAAGTGGAAGAGACAGGATGACAGAGACTCAA
GAGAAAAGCGCTGTTTCATCTGTGGAAGAGAGGGACACATTAAAAAGGAATGCCCACAATTCAA
AGGCTCTCCAGGTTTGTGTAAGTCTGATTATGTGTCTTCGTATTCTTCACCTACCCCTTTGAGA
CCAGTTGCTCAGGTAAAAGCCAGCCCAAACCTGAGAGGAGAGCTCCTCCATCCTCTTCACTCCC
CACAGCCTTCTGGAGTGCTTGCAGCTGTGTGCTGGGCCCTCCTGGCTGGCCTCTGGTGCTTACT
CCTTCTGTGTCCCACATACTATGTGGTAAGGCTTATTGGGCCCTGGTAGTAGGGGCTTGGTAGA
TGGCTCCTGCATACATGTCTGTCTTTCCAACTAACATGCAAACTTGTGCCACGCGTGTGCCTAA
TCCCAGCCCTTCTTGGATACAGTTTGAGGCTGTTTCTGTTGGTTTTACCTTCAGTTTTTGTAAA
CCAGTCTATTTCATT

hide sequence

RefSeq Acc Id:

XM_008771464 ⟹ XP_008769686

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,917 - 4,908,758 (+)	NCBI
mRatBN7.2	17	4,849,395 - 4,903,542 (+)	NCBI
Rnor_6.0	17	5,225,869 - 5,279,674 (+)	NCBI

Sequence:

show sequence

CGCTGAGCGCCGGAAGTGGGGCCGAAGGAAAACACGGAGAGGAGCCGGGCCCGGACAGGAAGCG
GCGGGGGACCGCAGCGGCGCTGGTGAGTGCTCCCGGGCGCCGTCTCGTCGCGTCCCTCCGGGAC
TCGCCTCCGGGCTGGGCCCGTGGGTTCCCCCCGCCCCGAGGAGCGTATCTGCCCGGCCCCGAGG
TACGAAGTAAGAAAGTTGAAGTCATAGACCATGGGAGATACAGCAAAGCCTTATTTTGTGAAGC
GCACTAAAGACCGTGGAATTATTGATGATGATGATTTCAGAAGGGGTCACCCCCAACAAGATTA
TTTAATGATGGATGATTATGCTAAAGGCCATAGCAGTAAAATGGAAAAGGGCCTTCCAAAAAAA
AAGATGTCCCCTGGGAACTATGGGAACACCCCCAGGAAAGGACTGTATGCGGTCTCCAGCAACC
CATATGCATTTAAAAACCCGATGTACAGTCAGCCTGCTTGGATGAACGATAACCACAAAGATCA
GAATAAGAAATGGCTGTCTGATGAACTGGCTGGAAATGCAGATAGCTGGAGAGAGTTCAAGCCT
GGACCTAGGATTCCCGTCCTAAGCCGGTCAAGGAAAGAATCCTTTCAAGAAAGTGAAGACACCT
ACAGGTGGCCAGAGGGGAGAGGCTGCAGAGCAGTGAGAAGGCTGTTTCAGAAAGACCTCGCCAG
CCTAGAAGCCATGACAGAAGTGGAAGCAGGAAGCCCTGAAAACAAGAAACAGCGGTCCAGACCT
CGTAAGCCACGGAGGACTAGAACGGAGGACATTGAGCAGGACGGAGAGTTAGAAGGTCCTGTGA
TCGACGAGTCCGTCCTTTCAACCAAGGAGTTGCTGGGCCTACAGCAGGCTGAGGAGCGGCTCAA
GAGAGACTGCATTGAGAGACTGAAAAGGCGATCACGAAATTGCCCAACAGCAAAGTACACCTGT
AAACTGTGCGATGCCTTGATTGACTCCATCCCGTTCGCACATAAGCACATCAAGGAGAAGAGGC
ACAAGAAGAACCTTAAGGAAAAGCAGGAAGAAGAATTGCTTACCACACTGCCCCCACCAGCACC
CTCCCAGATACATGCAGTCGGCAGCGCCATTGACAGAGTGGTGCAGGAGTTTGGTTTACACAAT
GAAAACTTGGATCAGAGGCTAGAAATTAAGTGTGCCATGGAAAACGTGTTCCAGCACAAACTAC
CAGACTGTTCTCTTAGGCTTTATGGATCGTCCTGTAGCAGGCTGGGCTTCAGAGACTCTGATGT
GAACATTGATGTTCAGTTTCCAGCTGTCATGTCTCAGCCAGATGTCCTCTTACTTGTTCAAGAA
TGTTTAAAGAACAGTGACTGCTTCATTGATGTTGATGCTGATTTCCATGCCCGGGTTCCTGTGG
TGGTATGCAGACATAAGCAAAGTGGCCTTCTTTGTAAAGTAAGTGCAGGAAACGAAAACGCCTG
GCTGACCACAAAGCATCTAACGGCTCTTGGAAAACTGGAGCCAAGGCTGCTTCCTCTGGTGATT
GCGTTTAGATACTGGGCAAAGCTTTGTAGCATCGATCGCCCTGAAGAAGGAGGCCTGCCGCCAT
ATGTGTTTGCTCTGATGGCTGTTTTCTTCCTTCAGCAAAGAAAAGAACCTCTCTTGCCAGTTTA
TCTAGGATCATGGATTGAAGAATTCTCATTAAATAAATTAGGGAATTTCAGCCTTAAAGACGTG
GAGAAAGATTCTGTGGTCTGGGAGTACACTGACAACAGCACAGGGGACACCAGCTCGCCAAAAG
AGGAAGCACTCAGAGAGACGGCAGCAAAGAAGGGGCAGGTGCCATTGACATTTAATATAAAACA
TCAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTGCGGTTCTATGCTTTAGAGTTT
AATCTGGCTGACTTAGTGATCAGTATTCGTGTCAAAGAATTGATATCACGGGAATCAAAGGACT
GGCCCAAAAAGCGCATCGCGATTGAAGACCCCTATTCTGTTAAAAGAAACGTGGCAAGGACCTT
GAATAACCAACCTGTGTTTGAGTACATACTTCATTGTCTGAGGACGACATATAAATATTTCGCT
CTTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCTAGCCCAATCATCTGTGCTTCAG
ATCCTTATAAAGAAGCGAAAAATTGTGGCCCAGAGCTCCAAGTGACAAATATTGATAAACTGGA
AAATGCACTTGTGGCTCCAGATCCTGGCGTTCAAACCTCAGGTTCCTGCAGGGCACAGCCACTT
ACTTTTAAAAAAACCACCGAGGAGCTGGGAAGCCCATCAAAGGAGACGATCAGAGGTGTCCACA
TTCCAGTCCACCAGGAAAGCTCTGGCTGTGTCCAGGCAGAGGCCAGTTATGAGGGGTTTAAGGA
TGCCACAGCAGAGCAACAGGAAGCAGGAAGTGACAGCGAGAACAGCAGAAGGAAGACCAAGCAT
CTTTTGAGCACTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAGAACTTCAGAACTGTGGCA
GCCTCTGTGGTCTCCAGGCAGACAACACTTTGGAATTAGTAGGGCTTCGGAATCCTGGGGCTGA
AAAGTGTAGCAGCTTTGCCTCTTTGGATGACAAGGCTGATGTCAATGAAAGAAGCACAGAAGGT
GCCGATGAACGAGGAGAAGCTCTGAATTGCTTTTCCCCTTCAGTCCAGAGCTGCACATCAGCAA
CCATGCACTTTGATGAGGAGGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAAGAGGAAGAGGA
GGAGCCCAGGCTCAGAACTAATCTTACAGAAGATGAGGAGGGGGTTGCTAGTGAAAATCAGGTG
GACAGCAGGTATACTGGGTCAGGTGAGGACGCCCTCTCTGAAGACGATGATTTGGCTGAGCCTG
CTAAGGGTGAAGACCTGGAAGAAAGTGGAGAACACATGGGTGGGGCTCTGCTCATAGACCTAAA
TAGAATAACTCTTAAAGAAGAAAGTTTTTTTGAGGAAAATTCACCTGGGGACCAGTCTGAGTTC
TTCTATGAATTTAGGAAACTGACCTTCACCAAAGGCAAGTCTCCCACAGTAGTGTGCAGCTTGT
GTAAGCGAGAGGGTCACCTAAAGAAGGACTGTCCTGAGGACTTCAAGAGGATCCAGCTGGAACC
TTTGCCACCCCTGACACCCAAGTTCTCAAATATCTTAGATCAAGTGTGCATCCAGTGTTACAAG
GATTTCTCTCCAACCATTGTAGAAGATCAGGCTCGCGAACATATCCGGCAAAATCTAGAAAGTT
TCATAAAACAGGATTTTCCAGGAACTAAATTGAGCTTGTTTGGCTCCTCCAAAAATGGATTTGG
GTTCAAACAGAGTGACCTTGACGTCTGTATGACGATTAACGGACATGAGACTGCTGAGGGGTTG
GACTGTGTGAGAACTATTGAAGAACTGGCACGGGTCCTCAGAAAGCACTCAGGACTGAGGAACA
TCCTGCCCATCACAACAGCCAAGGTGCCCATCGTGAAGTTCTCCCATCTGAGAAGCGGGCTGGA
GGTGGACATCAGTCTGTATAACACACTGGCTCTTCACAACACGCGGCTCCTGTTTGCATACTCA
GCCATTGACCCCAGAGTGAAATACCTGTGCTACACCATGAAAGTGTTCACAAAGATGTGTGACA
TCGGTGACGCGTCCAGAGGCAGCTTGTCATCATACGCTTACACTCTTATGGTGCTGTACTTCCT
CCAGCAGCGGTCCCCCCCTGTCATCCCTGTGCTTCAGGAGATATACAAAGGTGAAAAGAAACCA
GAAATACTTGTTGATGGCTGGAATATCTACTTTTTCGATCAAATAAATGAACTGCCCACTTGTT
GGCCAGAATATGGAAAAAATACAGAATCTGTTGGGCAGCTGTGGTTGGGACTTCTACGCTTCTA
CACTGAGGAGTTTGACTTTAAGGAACACGTAATCAGCATCAGAAGAAAAAGTCTGCTTACAACT
TTTAAGAAACAGTGGACCTCAAAATACATCGTCATTGAAGATCCCTTTGATTTGAACCACAATC
TTGGTGCTGGATTATCAAGGAAAATGACAAATTTTATAATGAAAGCTTTTATCAATGGTAGAAG
AGTATTTGGAATTCCAGTCAAAGGATTTCCAAAGGACATCCTGGCATACTTCTTTGATCCGGAT
GTCCTGACTGAGGGAGAACTGGCCCCAAATGACAGGTGCTGCCGGATCTGTGGGAAAATTGGCC
ACTTCATGAAGGACTGTCCCATGAGGAGAAAAGTGAGGCGGCGGCGAGACCAGGAAGATACCCC
AAACCAAAGGTACACAGAGAGCAAAGAAAAAAGAAGCAAAGAGGACAAAGAAATTCAGAACAAG
TACACAGAAAAGGAAGTGTCAGCAAAAGAAGACAAGGCTGCACCGTGCACAGCTGCCAAAGCCA
AGCCAATGAGGGCAGCTGTTGACCTGGGCCGGGAGAAACTTGTCAGGACACCAGCCGAAAAGTG
GAAGAGACAGGATGACAGAGACTCAAGAGAAAAGCGCTGTTTCATCTGTGGAAGAGAGGGACAC
ATTAAAAAGGAATGCCCACAATTCAAAGGCTCTCCAGGTTTGTGTAAGTCTGATTATGTGTCTT
CGTATTCTTCACCTACCCCTTTGAGACCAGTTGCTCAGGCAGTGCTTTTACATGAAGACAAAAA
GAAACAAAAAACAACCATATTTTTGAGTCCCCAGTCAGGTAGCCTTTCCAGTAAATATATGACT
CAGGGGAGAGCCTCAGTGAAGAGGACCCAGCAAGAATCATGAGGGAAGGAACTGAAGCACGAAA
TGCCACTCAGGTGTCCCTGTCCACTTGGGAATTAGGTTCGTGTCACAGCACATAGTGACACAGG
TCAGGCTTCAACCTAACAGTTGAGGGCATCGAGATTTTTTAAATTTTAATGAAACTGTTAATGA
GGAAAAGAAAAATTTTAATATAATCTTAACTATACCACCAATGCCCAGAGATTTGAAGATTTTA
ATAGAAAGTCAACTTAAAAAAAAAATGTAACTGAGGGCCATTATTCAATGACTACAGTGTCATG
GTTTTTAGTTCTTTCAAAGCACTCTAAAGATAGCGTGCTGCTTACCAGAGGCTGGTAAGGTTAG
CCCTCTTTTCCCTACACATCCCCCTTTTTTTTATTTCAAGAGGGGATTCTCTTTGCTGTTACTG
GATCGTGGTATGGACGCACATCAAGCATGTGTGGACTATATGCTGTACATAGGGTCTACAAGCA
TTCTTCATGGTTCTTTGTAGAAGTGATAGCATGGAATGCCACACCTGTTGGTGTGGGCCTCGGT
GGACCTCAGCACCACTGACACATCTCTGAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTG
TGCTCATAAAAATGAAGTCATAAAAATAAGTAGTCCTTTTGCTGGTTTAAAAAAGAAAAATTAA
AGGGGAAAAGGACAGAATAAAAGTGCTTTTTACTTTTTATGATACTCAGAAATTAGGGTGGAAA
GCTTTTACAAACCTCTGAAGATCAAAGAGGCTGCTGTCTCTGCCAATCACAAGTTTGATTGGCA
GCCTTCTGGTCTGACTGGAGTCCTCTCTAAACTGTTAAAGAACTTCACAAGCCTTTCTGAGATA
GTACAGTCAGAACTATGCCGGTCTATTTATCATTTTGAAATAAAATGGAACTTTCAATGTGTAA
TTTTA

hide sequence

RefSeq Acc Id:

XM_008771465 ⟹ XP_008769687

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,917 - 4,908,758 (+)	NCBI
mRatBN7.2	17	4,849,395 - 4,903,542 (+)	NCBI
Rnor_6.0	17	5,225,870 - 5,279,674 (+)	NCBI

Sequence:

show sequence

GCTGAGCGCCGGAAGTGGGGCCGAAGGAAAACACGGAGAGGAGCCGGGCCCGGACAGGAAGCGG
CGGGGGACCGCAGCGGCGCTGGTGAGTGCTCCCGGGCGCCGTCTCGTCGCGTCCCTCCGGGACT
CGCCTCCGGGCTGGGCCCGTGGGTTCCCCCCGCCCCGAGGAGCGTATCTGCCCGGCCCCGAGGT
ACGAAGTAAGAAAGTTGAAGTCATAGACCATGGGAGATACAGCAAAGCCTTATTTTGTGAAGCG
CACTAAAGACCGTGGAATTATTGATGATGATGATTTCAGAAGGGGTCACCCCCAACAAGATTAT
TTAATGATGGATGATTATGCTAAAGGCCATAGCAGTAAAATGGAAAAGGGCCTTCCAAAAAAAA
AGATGTCCCCTGGGAACTATGGGAACACCCCCAGGAAAGGACTGTATGCGGTCTCCAGCAACCC
ATATGCATTTAAAAACCCGATGTACAGTCAGCCTGCTTGGATGAACGATAACCACAAAGATCAG
AATAAGAAATGGCTGTCTGATGAACTGGCTGGAAATGCAGATAGCTGGAGAGAGTTCAAGCCTG
GACCTAGGATTCCCGTCCTAAGCCGGTCAAGGAAAGAATCCTTTCAAGAAAGTGAAGACACCTA
CAGGTGGCCAGAGGGGAGAGGCTGCAGAGCAGTGAGAAGGCTGTTTCAGAAAGACCTCGCCAGC
CTAGAAGCCATGACAGAAGTGGAAGCAGGAAGCCCTGAAAACAAGAAACAGCGGTCCAGACCTC
GTAAGCCACGGAGGACTAGAACGGAGGACATTGAGCAGGACGGAGAGTTAGAAGGTCCTGTGAT
CGACGAGTCCGTCCTTTCAACCAAGGAGTTGCTGGGCCTACAGCAGGCTGAGGAGCGGCTCAAG
AGAGACTGCATTGAGAGACTGAAAAGGCGATCACGAAATTGCCCAACAGCAAAGTACACCTGTA
AACTGTGCGATGCCTTGATTGACTCCATCCCGTTCGCACATAAGCACATCAAGGAGAAGAGGCA
CAAGAAGAACCTTAAGGAAAAGCAGGAAGAAGAATTGCTTACCACACTGCCCCCACCAGCACCC
TCCCAGATACATGCAGTCGGCAGCGCCATTGACAGAGTGGTGCAGGAGTTTGGTTTACACAATG
AAAACTTGGATCAGAGGCTAGAAATTAAGTGTGCCATGGAAAACGTGTTCCAGCACAAACTACC
AGACTGTTCTCTTAGGCTTTATGGATCGTCCTGTAGCAGGCTGGGCTTCAGAGACTCTGATGTG
AACATTGATGTTCAGTTTCCAGCTGTCATGTCTCAGCCAGATGTCCTCTTACTTGTTCAAGAAT
GTTTAAAGAACAGTGACTGCTTCATTGATGTTGATGCTGATTTCCATGCCCGGGTTCCTGTGGT
GGTATGCAGACATAAGCAAAGTGGCCTTCTTTGTAAAGTAAGTGCAGGAAACGAAAACGCCTGG
CTGACCACAAAGCATCTAACGGCTCTTGGAAAACTGGAGCCAAGGCTGCTTCCTCTGGTGATTG
CGTTTAGATACTGGGCAAAGCTTTGTAGCATCGATCGCCCTGAAGAAGGAGGCCTGCCGCCATA
TGTGTTTGCTCTGATGGCTGTTTTCTTCCTTCAGCAAAGAAAAGAACCTCTCTTGCCAGTTTAT
CTAGGATCATGGATTGAAGAATTCTCATTAAATAAATTAGGGAATTTCAGCCTTAAAGACGTGG
AGAAAGATTCTGTGGTCTGGGAGTACACTGACAACAGCACAGGGGACACCAGCTCGCCAAAAGA
GGAAGCACTCAGAGAGACGGCAGCAAAGAAGGGGCAGGTGCCATTGACATTTAATATAAAACAT
CAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTGCGGTTCTATGCTTTAGAGTTTA
ATCTGGCTGACTTAGTGATCAGTATTCGTGTCAAAGAATTGATATCACGGGAATCAAAGGACTG
GCCCAAAAAGCGCATCGCGATTGAAGACCCCTATTCTGTTAAAAGAAACGTGGCAAGGACCTTG
AATAACCAACCTGTGTTTGAGTACATACTTCATTGTCTGAGGACGACATATAAATATTTCGCTC
TTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCTAGCCCAATCATCTGTGCTTCAGA
TCCTTATAAAGAAGCGAAAAATTGTGGCCCAGAGCTCCAAGTGACAAATATTGATAAACTGGAA
AATGCACTTGTGGCTCCAGATCCTGGCGTTCAAACCTCAGGTTCCTGCAGGGCACAGCCACTTA
CTTTTAAAAAAACCACCGAGGAGCTGGGAAGCCCATCAAAGGAGACGATCAGAGGTGTCCACAT
TCCAGTCCACCAGGAAAGCTCTGGCTGTGTCCAGGCAGAGGCCAGTTATGAGGGGTTTAAGGAT
GCCACAGCAGAGCAACAGGAAGCAGGAAGTGACAGCGAGAACAGCAGAAGGAAGACCAAGCATC
TTTTGAGCACTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAGAACTTCAGAACTGTGGCAG
CCTCTGTGGTCTCCAGGCAGACAACACTTTGGAATTAGTAGGGCTTCGGAATCCTGGGGCTGAA
AAGTGTAGCAGCTTTGCCTCTTTGGATGACAAGGCTGATGTCAATGAAAGAAGCACAGAAGGTG
CCGATGAACGAGGAGAAGCTCTGAATTGCTTTTCCCCTTCAGTCCAGAGCTGCACATCAGCAAC
CATGCACTTTGATGAGGAGGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAAGAGGAAGAGGAG
GAGCCCAGGCTCAGAACTAATCTTACAGAAGATGAGGAGGGGGTTGCTAGTGAAAATCAGGTGG
ACAGCAGGTATACTGGGTCAGGTGAGGACGCCCTCTCTGAAGACGATGATTTGGCTGAGCCTGC
TAAGGGTGAAGACCTGGAAGAAAGTGGAGAACACATGGGTGGGGCTCTGCTCATAGACCTAAAT
AGAATAACTCTTAAAGAAGAAAGTTTTTTTGAGGAAAATTCACCTGGGGACCAGTCTGAGTTCT
TCTATGAATTTAGGAAACTGACCTTCACCAAAGGCAAGTCTCCCACAGTAGTGTGCAGCTTGTG
TAAGCGAGAGGGTCACCTAAAGAAGGACTGTCCTGAGGACTTCAAGAGGATCCAGCTGGAACCT
TTGCCACCCCTGACACCCAAGTTCTCAAATATCTTAGATCAAGTGTGCATCCAGTGTTACAAGG
ATTTCTCTCCAACCATTGTAGAAGATCAGGCTCGCGAACATATCCGGCAAAATCTAGAAAGTTT
CATAAAACAGGATTTTCCAGGAACTAAATTGAGCTTGTTTGGCTCCTCCAAAAATGGATTTGGG
TTCAAACAGAGTGACCTTGACGTCTGTATGACGATTAACGGACATGAGACTGCTGAGGGGTTGG
ACTGTGTGAGAACTATTGAAGAACTGGCACGGGTCCTCAGAAAGCACTCAGGACTGAGGAACAT
CCTGCCCATCACAACAGCCAAGGTGCCCATCGTGAAGTTCTCCCATCTGAGAAGCGGGCTGGAG
GTGGACATCAGTCTGTATAACACACTGGCTCTTCACAACACGCGGCTCCTGTTTGCATACTCAG
CCATTGACCCCAGAGTGAAATACCTGTGCTACACCATGAAAGTGTTCACAAAGATGTGTGACAT
CGGTGACGCGTCCAGAGGCAGCTTGTCATCATACGCTTACACTCTTATGGTGCTGTACTTCCTC
CAGCAGCGGTCCCCCCCTGTCATCCCTGTGCTTCAGGAGATATACAAAGGTGAAAAGAAACCAG
AAATACTTGTTGATGGCTGGAATATCTACTTTTTCGATCAAATAAATGAACTGCCCACTTGTTG
GCCAGAATATGGAAAAAATACAGAATCTGTTGGGCAGCTGTGGTTGGGACTTCTACGCTTCTAC
ACTGAGGAGTTTGACTTTAAGGAACACGTAATCAGCATCAGAAGAAAAAGTCTGCTTACAACTT
TTAAGAAACAGTGGACCTCAAAATACATCGTCATTGAAGATCCCTTTGATTTGAACCACAATCT
TGGTGCTGGATTATCAAGGAAAATGACAAATTTTATAATGAAAGCTTTTATCAATGGTAGAAGA
GTATTTGGAATTCCAGTCAAAGGATTTCCAAAGGACATCCTGGCATACTTCTTTGATCCGGATG
TCCTGACTGAGGGAGAACTGGCCCCAAATGACAGGTGCTGCCGGATCTGTGGGAAAATTGGCCA
CTTCATGAAGGACTGTCCCATGAGGAGAAAAGTGAGGCGGCGGCGAGACCAGGAAGATACCCCA
AACCAAAGGTACACAGAGAGCAAAGAAAAAAGAAGCAAAGAGGACAAAGAAATTCAGAACAAGT
ACACAGAAAAGGAAGTGTCAGCAAAAGAAGACAAGGCTGCACCGTGCACAGCTGCCAAAGCCAA
GCCAATGAGGGCAGCTGTTGACCTGGGCCGGGAGAAACTTGTCAGGACACCAGCCGAAAAGTGG
AAGAGACAGGATGACAGAGACTCAAGAGAAAAGCGCTGTTTCATCTGTGGAAGAGAGGGACACA
TTAAAAAGGAATGCCCACAATTCAAAGGCTCTCCAGGTAGCCTTTCCAGTAAATATATGACTCA
GGGGAGAGCCTCAGTGAAGAGGACCCAGCAAGAATCATGAGGGAAGGAACTGAAGCACGAAATG
CCACTCAGGTGTCCCTGTCCACTTGGGAATTAGGTTCGTGTCACAGCACATAGTGACACAGGTC
AGGCTTCAACCTAACAGTTGAGGGCATCGAGATTTTTTAAATTTTAATGAAACTGTTAATGAGG
AAAAGAAAAATTTTAATATAATCTTAACTATACCACCAATGCCCAGAGATTTGAAGATTTTAAT
AGAAAGTCAACTTAAAAAAAAAATGTAACTGAGGGCCATTATTCAATGACTACAGTGTCATGGT
TTTTAGTTCTTTCAAAGCACTCTAAAGATAGCGTGCTGCTTACCAGAGGCTGGTAAGGTTAGCC
CTCTTTTCCCTACACATCCCCCTTTTTTTTATTTCAAGAGGGGATTCTCTTTGCTGTTACTGGA
TCGTGGTATGGACGCACATCAAGCATGTGTGGACTATATGCTGTACATAGGGTCTACAAGCATT
CTTCATGGTTCTTTGTAGAAGTGATAGCATGGAATGCCACACCTGTTGGTGTGGGCCTCGGTGG
ACCTCAGCACCACTGACACATCTCTGAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTG
CTCATAAAAATGAAGTCATAAAAATAAGTAGTCCTTTTGCTGGTTTAAAAAAGAAAAATTAAAG
GGGAAAAGGACAGAATAAAAGTGCTTTTTACTTTTTATGATACTCAGAAATTAGGGTGGAAAGC
TTTTACAAACCTCTGAAGATCAAAGAGGCTGCTGTCTCTGCCAATCACAAGTTTGATTGGCAGC
CTTCTGGTCTGACTGGAGTCCTCTCTAAACTGTTAAAGAACTTCACAAGCCTTTCTGAGATAGT
ACAGTCAGAACTATGCCGGTCTATTTATCATTTTGAAATAAAATGGAACTTTCAATGTGTAATT
TTA

hide sequence

RefSeq Acc Id:

XM_039096239 ⟹ XP_038952167

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,855,420 - 4,900,694 (+)	NCBI
mRatBN7.2	17	4,849,892 - 4,895,137 (+)	NCBI

RefSeq Acc Id:

XM_039096241 ⟹ XP_038952169

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,917 - 4,900,694 (+)	NCBI
mRatBN7.2	17	4,849,395 - 4,895,137 (+)	NCBI

RefSeq Acc Id:

XM_039096243 ⟹ XP_038952171

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,917 - 4,897,506 (+)	NCBI
mRatBN7.2	17	4,849,395 - 4,891,996 (+)	NCBI

RefSeq Acc Id:

XM_063276706 ⟹ XP_063132776

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,790 - 4,908,758 (+)	NCBI

RefSeq Acc Id:

XM_063276707 ⟹ XP_063132777

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,790 - 4,908,758 (+)	NCBI

RefSeq Acc Id:

XM_063276708 ⟹ XP_063132778

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,917 - 4,900,694 (+)	NCBI

RefSeq Acc Id:

XM_063276709 ⟹ XP_063132779

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,790 - 4,900,694 (+)	NCBI

RefSeq Acc Id:

XM_063276711 ⟹ XP_063132781

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	4,854,917 - 4,889,618 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001413960	(Get FASTA)	NCBI Sequence Viewer
	XP_006253593	(Get FASTA)	NCBI Sequence Viewer
	XP_006253594	(Get FASTA)	NCBI Sequence Viewer
	XP_006253595	(Get FASTA)	NCBI Sequence Viewer
	XP_008769686	(Get FASTA)	NCBI Sequence Viewer
	XP_008769687	(Get FASTA)	NCBI Sequence Viewer
	XP_038952167	(Get FASTA)	NCBI Sequence Viewer
	XP_038952169	(Get FASTA)	NCBI Sequence Viewer
	XP_038952171	(Get FASTA)	NCBI Sequence Viewer
	XP_063132776	(Get FASTA)	NCBI Sequence Viewer
	XP_063132777	(Get FASTA)	NCBI Sequence Viewer
	XP_063132778	(Get FASTA)	NCBI Sequence Viewer
	XP_063132779	(Get FASTA)	NCBI Sequence Viewer
	XP_063132781	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL93872	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000022373
	ENSRNOP00000022373.8
	ENSRNOP00000085565
	ENSRNOP00000085565.1
	ENSRNOP00000093045
	ENSRNOP00000093045.1
	ENSRNOP00000110727.1
	ENSRNOP00000111043.1

RefSeq Acc Id:	XP_006253595 ⟸ XM_006253533
- Peptide Label:	isoform X1
- UniProtKB:	A6KAG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGDTAKPYFVKRTKDRGIIDDDDFRRGHPQQDYLMMDDYAKGHSSKMEKGLPKKKMSPGNYGNT PRKGLYAVSSNPYAFKNPMYSQPAWMNDNHKDQNKKWLSDELAGNADSWREFKPGPRIPVLSRS RKESFQESEDTYRWPEGRGCRAVRRLFQKDLASLEAMTEVEAGSPENKKQRSRPRKPRRTRTED IEQDGELEGPVIDESVLSTKELLGLQQAEERLKRDCIERLKRRSRNCPTAKYTCKLCDALIDSI PFAHKHIKEKRHKKNLKEKQEEELLTTLPPPAPSQIHAVGSAIDRVVQEFGLHNENLDQRLEIK CAMENVFQHKLPDCSLRLYGSSCSRLGFRDSDVNIDVQFPAVMSQPDVLLLVQECLKNSDCFID VDADFHARVPVVVCRHKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLLPLVIAFRYWAKLCS IDRPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLGSWIEEFSLNKLGNFSLKDVEKDSVVWEYT DNSTGDTSSPKEEALRETAAKKGQVPLTFNIKHQPSVPVGQLWVELLRFYALEFNLADLVISIR VKELISRESKDWPKKRIAIEDPYSVKRNVARTLNNQPVFEYILHCLRTTYKYFALPHKVTKPNL TKPPSPIICASDPYKEAKNCGPELQVTNIDKLENALVAPDPGVQTSGSCRAQPLTFKKTTEELG SPSKETIRGVHIPVHQESSGCVQAEASYEGFKDATAEQQEAGSDSENSRRKTKHLLSTDDQGLS SSKHPELQNCGSLCGLQADNTLELVGLRNPGAEKCSSFASLDDKADVNERSTEGADERGEALNC FSPSVQSCTSATMHFDEEEEEEEEEEEEEEEEEEPRLRTNLTEDEEGVASENQVDSRYTGSGED ALSEDDDLAEPAKGEDLEESGEHMGGALLIDLNRITLKEESFFEENSPGDQSEFFYEFRKLTFT KGKSPTVVCSLCKREGHLKKDCPEDFKRIQLEPLPPLTPKFSNILDQVCIQCYKDFSPTIVEDQ AREHIRQNLESFIKQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEGLDCVRTIEELA RVLRKHSGLRNILPITTAKVPIVKFSHLRSGLEVDISLYNTLALHNTRLLFAYSAIDPRVKYLC YTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQEIYKGEKKPEILVDGWNIY FFDQINELPTCWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYI VIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKDILAYFFDPDVLTEGELAPN DRCCRICGKIGHFMKDCPMRRKVRRRRDQEDTPNQRYTESKEKRSKEDKEIQNKYTEKEVSAKE DKAAPCTAAKAKPMRAAVDLGREKLVRTPAEKWKRQDDRDSREKRCFICGREGHIKKECPQFKG SPGLCKSDYVSSYSSPTPLRPVAQVKASPNLRGELLHPLHSPQPSGVLAAVCWALLAGLWCLLL LCPTYYVVRLIGPW hide sequence

RefSeq Acc Id:	XP_006253594 ⟸ XM_006253532
- Peptide Label:	isoform X1
- UniProtKB:	A6KAG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGDTAKPYFVKRTKDRGIIDDDDFRRGHPQQDYLMMDDYAKGHSSKMEKGLPKKKMSPGNYGNT PRKGLYAVSSNPYAFKNPMYSQPAWMNDNHKDQNKKWLSDELAGNADSWREFKPGPRIPVLSRS RKESFQESEDTYRWPEGRGCRAVRRLFQKDLASLEAMTEVEAGSPENKKQRSRPRKPRRTRTED IEQDGELEGPVIDESVLSTKELLGLQQAEERLKRDCIERLKRRSRNCPTAKYTCKLCDALIDSI PFAHKHIKEKRHKKNLKEKQEEELLTTLPPPAPSQIHAVGSAIDRVVQEFGLHNENLDQRLEIK CAMENVFQHKLPDCSLRLYGSSCSRLGFRDSDVNIDVQFPAVMSQPDVLLLVQECLKNSDCFID VDADFHARVPVVVCRHKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLLPLVIAFRYWAKLCS IDRPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLGSWIEEFSLNKLGNFSLKDVEKDSVVWEYT DNSTGDTSSPKEEALRETAAKKGQVPLTFNIKHQPSVPVGQLWVELLRFYALEFNLADLVISIR VKELISRESKDWPKKRIAIEDPYSVKRNVARTLNNQPVFEYILHCLRTTYKYFALPHKVTKPNL TKPPSPIICASDPYKEAKNCGPELQVTNIDKLENALVAPDPGVQTSGSCRAQPLTFKKTTEELG SPSKETIRGVHIPVHQESSGCVQAEASYEGFKDATAEQQEAGSDSENSRRKTKHLLSTDDQGLS SSKHPELQNCGSLCGLQADNTLELVGLRNPGAEKCSSFASLDDKADVNERSTEGADERGEALNC FSPSVQSCTSATMHFDEEEEEEEEEEEEEEEEEEPRLRTNLTEDEEGVASENQVDSRYTGSGED ALSEDDDLAEPAKGEDLEESGEHMGGALLIDLNRITLKEESFFEENSPGDQSEFFYEFRKLTFT KGKSPTVVCSLCKREGHLKKDCPEDFKRIQLEPLPPLTPKFSNILDQVCIQCYKDFSPTIVEDQ AREHIRQNLESFIKQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEGLDCVRTIEELA RVLRKHSGLRNILPITTAKVPIVKFSHLRSGLEVDISLYNTLALHNTRLLFAYSAIDPRVKYLC YTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQEIYKGEKKPEILVDGWNIY FFDQINELPTCWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYI VIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKDILAYFFDPDVLTEGELAPN DRCCRICGKIGHFMKDCPMRRKVRRRRDQEDTPNQRYTESKEKRSKEDKEIQNKYTEKEVSAKE DKAAPCTAAKAKPMRAAVDLGREKLVRTPAEKWKRQDDRDSREKRCFICGREGHIKKECPQFKG SPGLCKSDYVSSYSSPTPLRPVAQVKASPNLRGELLHPLHSPQPSGVLAAVCWALLAGLWCLLL LCPTYYVVRLIGPW hide sequence

RefSeq Acc Id:	XP_006253593 ⟸ XM_006253531
- Peptide Label:	isoform X1
- UniProtKB:	A6KAG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGDTAKPYFVKRTKDRGIIDDDDFRRGHPQQDYLMMDDYAKGHSSKMEKGLPKKKMSPGNYGNT PRKGLYAVSSNPYAFKNPMYSQPAWMNDNHKDQNKKWLSDELAGNADSWREFKPGPRIPVLSRS RKESFQESEDTYRWPEGRGCRAVRRLFQKDLASLEAMTEVEAGSPENKKQRSRPRKPRRTRTED IEQDGELEGPVIDESVLSTKELLGLQQAEERLKRDCIERLKRRSRNCPTAKYTCKLCDALIDSI PFAHKHIKEKRHKKNLKEKQEEELLTTLPPPAPSQIHAVGSAIDRVVQEFGLHNENLDQRLEIK CAMENVFQHKLPDCSLRLYGSSCSRLGFRDSDVNIDVQFPAVMSQPDVLLLVQECLKNSDCFID VDADFHARVPVVVCRHKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLLPLVIAFRYWAKLCS IDRPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLGSWIEEFSLNKLGNFSLKDVEKDSVVWEYT DNSTGDTSSPKEEALRETAAKKGQVPLTFNIKHQPSVPVGQLWVELLRFYALEFNLADLVISIR VKELISRESKDWPKKRIAIEDPYSVKRNVARTLNNQPVFEYILHCLRTTYKYFALPHKVTKPNL TKPPSPIICASDPYKEAKNCGPELQVTNIDKLENALVAPDPGVQTSGSCRAQPLTFKKTTEELG SPSKETIRGVHIPVHQESSGCVQAEASYEGFKDATAEQQEAGSDSENSRRKTKHLLSTDDQGLS SSKHPELQNCGSLCGLQADNTLELVGLRNPGAEKCSSFASLDDKADVNERSTEGADERGEALNC FSPSVQSCTSATMHFDEEEEEEEEEEEEEEEEEEPRLRTNLTEDEEGVASENQVDSRYTGSGED ALSEDDDLAEPAKGEDLEESGEHMGGALLIDLNRITLKEESFFEENSPGDQSEFFYEFRKLTFT KGKSPTVVCSLCKREGHLKKDCPEDFKRIQLEPLPPLTPKFSNILDQVCIQCYKDFSPTIVEDQ AREHIRQNLESFIKQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEGLDCVRTIEELA RVLRKHSGLRNILPITTAKVPIVKFSHLRSGLEVDISLYNTLALHNTRLLFAYSAIDPRVKYLC YTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQEIYKGEKKPEILVDGWNIY FFDQINELPTCWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYI VIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKDILAYFFDPDVLTEGELAPN DRCCRICGKIGHFMKDCPMRRKVRRRRDQEDTPNQRYTESKEKRSKEDKEIQNKYTEKEVSAKE DKAAPCTAAKAKPMRAAVDLGREKLVRTPAEKWKRQDDRDSREKRCFICGREGHIKKECPQFKG SPGLCKSDYVSSYSSPTPLRPVAQVKASPNLRGELLHPLHSPQPSGVLAAVCWALLAGLWCLLL LCPTYYVVRLIGPW hide sequence

RefSeq Acc Id:	XP_008769686 ⟸ XM_008771464
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6GE00 (UniProtKB/TrEMBL), A6KAG4 (UniProtKB/TrEMBL), A6KAG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGDTAKPYFVKRTKDRGIIDDDDFRRGHPQQDYLMMDDYAKGHSSKMEKGLPKKKMSPGNYGNT PRKGLYAVSSNPYAFKNPMYSQPAWMNDNHKDQNKKWLSDELAGNADSWREFKPGPRIPVLSRS RKESFQESEDTYRWPEGRGCRAVRRLFQKDLASLEAMTEVEAGSPENKKQRSRPRKPRRTRTED IEQDGELEGPVIDESVLSTKELLGLQQAEERLKRDCIERLKRRSRNCPTAKYTCKLCDALIDSI PFAHKHIKEKRHKKNLKEKQEEELLTTLPPPAPSQIHAVGSAIDRVVQEFGLHNENLDQRLEIK CAMENVFQHKLPDCSLRLYGSSCSRLGFRDSDVNIDVQFPAVMSQPDVLLLVQECLKNSDCFID VDADFHARVPVVVCRHKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLLPLVIAFRYWAKLCS IDRPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLGSWIEEFSLNKLGNFSLKDVEKDSVVWEYT DNSTGDTSSPKEEALRETAAKKGQVPLTFNIKHQPSVPVGQLWVELLRFYALEFNLADLVISIR VKELISRESKDWPKKRIAIEDPYSVKRNVARTLNNQPVFEYILHCLRTTYKYFALPHKVTKPNL TKPPSPIICASDPYKEAKNCGPELQVTNIDKLENALVAPDPGVQTSGSCRAQPLTFKKTTEELG SPSKETIRGVHIPVHQESSGCVQAEASYEGFKDATAEQQEAGSDSENSRRKTKHLLSTDDQGLS SSKHPELQNCGSLCGLQADNTLELVGLRNPGAEKCSSFASLDDKADVNERSTEGADERGEALNC FSPSVQSCTSATMHFDEEEEEEEEEEEEEEEEEEPRLRTNLTEDEEGVASENQVDSRYTGSGED ALSEDDDLAEPAKGEDLEESGEHMGGALLIDLNRITLKEESFFEENSPGDQSEFFYEFRKLTFT KGKSPTVVCSLCKREGHLKKDCPEDFKRIQLEPLPPLTPKFSNILDQVCIQCYKDFSPTIVEDQ AREHIRQNLESFIKQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEGLDCVRTIEELA RVLRKHSGLRNILPITTAKVPIVKFSHLRSGLEVDISLYNTLALHNTRLLFAYSAIDPRVKYLC YTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQEIYKGEKKPEILVDGWNIY FFDQINELPTCWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYI VIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKDILAYFFDPDVLTEGELAPN DRCCRICGKIGHFMKDCPMRRKVRRRRDQEDTPNQRYTESKEKRSKEDKEIQNKYTEKEVSAKE DKAAPCTAAKAKPMRAAVDLGREKLVRTPAEKWKRQDDRDSREKRCFICGREGHIKKECPQFKG SPGLCKSDYVSSYSSPTPLRPVAQAVLLHEDKKKQKTTIFLSPQSGSLSSKYMTQGRASVKRTQ QES hide sequence

RefSeq Acc Id:	XP_008769687 ⟸ XM_008771465
- Peptide Label:	isoform X4
- UniProtKB:	D3ZKR9 (UniProtKB/TrEMBL), A6KAG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGDTAKPYFVKRTKDRGIIDDDDFRRGHPQQDYLMMDDYAKGHSSKMEKGLPKKKMSPGNYGNT PRKGLYAVSSNPYAFKNPMYSQPAWMNDNHKDQNKKWLSDELAGNADSWREFKPGPRIPVLSRS RKESFQESEDTYRWPEGRGCRAVRRLFQKDLASLEAMTEVEAGSPENKKQRSRPRKPRRTRTED IEQDGELEGPVIDESVLSTKELLGLQQAEERLKRDCIERLKRRSRNCPTAKYTCKLCDALIDSI PFAHKHIKEKRHKKNLKEKQEEELLTTLPPPAPSQIHAVGSAIDRVVQEFGLHNENLDQRLEIK CAMENVFQHKLPDCSLRLYGSSCSRLGFRDSDVNIDVQFPAVMSQPDVLLLVQECLKNSDCFID VDADFHARVPVVVCRHKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLLPLVIAFRYWAKLCS IDRPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLGSWIEEFSLNKLGNFSLKDVEKDSVVWEYT DNSTGDTSSPKEEALRETAAKKGQVPLTFNIKHQPSVPVGQLWVELLRFYALEFNLADLVISIR VKELISRESKDWPKKRIAIEDPYSVKRNVARTLNNQPVFEYILHCLRTTYKYFALPHKVTKPNL TKPPSPIICASDPYKEAKNCGPELQVTNIDKLENALVAPDPGVQTSGSCRAQPLTFKKTTEELG SPSKETIRGVHIPVHQESSGCVQAEASYEGFKDATAEQQEAGSDSENSRRKTKHLLSTDDQGLS SSKHPELQNCGSLCGLQADNTLELVGLRNPGAEKCSSFASLDDKADVNERSTEGADERGEALNC FSPSVQSCTSATMHFDEEEEEEEEEEEEEEEEEEPRLRTNLTEDEEGVASENQVDSRYTGSGED ALSEDDDLAEPAKGEDLEESGEHMGGALLIDLNRITLKEESFFEENSPGDQSEFFYEFRKLTFT KGKSPTVVCSLCKREGHLKKDCPEDFKRIQLEPLPPLTPKFSNILDQVCIQCYKDFSPTIVEDQ AREHIRQNLESFIKQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEGLDCVRTIEELA RVLRKHSGLRNILPITTAKVPIVKFSHLRSGLEVDISLYNTLALHNTRLLFAYSAIDPRVKYLC YTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQEIYKGEKKPEILVDGWNIY FFDQINELPTCWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYI VIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKDILAYFFDPDVLTEGELAPN DRCCRICGKIGHFMKDCPMRRKVRRRRDQEDTPNQRYTESKEKRSKEDKEIQNKYTEKEVSAKE DKAAPCTAAKAKPMRAAVDLGREKLVRTPAEKWKRQDDRDSREKRCFICGREGHIKKECPQFKG SPGSLSSKYMTQGRASVKRTQQES hide sequence

Ensembl Acc Id:

ENSRNOP00000022373 ⟸ ENSRNOT00000022373

RefSeq Acc Id:	XP_038952169 ⟸ XM_039096241
- Peptide Label:	isoform X3
- UniProtKB:	A6KAG5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952171 ⟸ XM_039096243
- Peptide Label:	isoform X6
- UniProtKB:	A6KAG5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952167 ⟸ XM_039096239
- Peptide Label:	isoform X1
- UniProtKB:	A6KAG5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000093045 ⟸ ENSRNOT00000117724

Ensembl Acc Id:

ENSRNOP00000085565 ⟸ ENSRNOT00000120026

RefSeq Acc Id:	XP_063132776 ⟸ XM_063276706
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6GE00 (UniProtKB/TrEMBL), A6KAG4 (UniProtKB/TrEMBL), A6KAG5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132777 ⟸ XM_063276707
- Peptide Label:	isoform X4
- UniProtKB:	D3ZKR9 (UniProtKB/TrEMBL), A6KAG5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132779 ⟸ XM_063276709
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6GKH2 (UniProtKB/TrEMBL), A6KAG5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132778 ⟸ XM_063276708
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6GKH2 (UniProtKB/TrEMBL), A6KAG5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132781 ⟸ XM_063276711
- Peptide Label:	isoform X7

RefSeq Acc Id:	NP_001413960 ⟸ NM_001427031
- UniProtKB:	D3ZKR9 (UniProtKB/TrEMBL), A6KAG5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000111043 ⟸ ENSRNOT00000152148

Ensembl Acc Id:

ENSRNOP00000110727 ⟸ ENSRNOT00000133368

Protein Domains

CCHC-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZKR9-F1-model_v2	AlphaFold	D3ZKR9	1-1479	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700274

Promoter ID:

EPDNEW_R10795

Type:

initiation region

Name:

Zcchc6_1

Description:

zinc finger CCHC-type containing 6

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	17	5,225,925 - 5,225,985	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1586015	AgrOrtholog
BioCyc Gene	G2FUF-10427	BioCyc
Ensembl Genes	ENSRNOG00000016629	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000022373	ENTREZGENE
	ENSRNOT00000022373.9	UniProtKB/TrEMBL
	ENSRNOT00000117724	ENTREZGENE
	ENSRNOT00000117724.2	UniProtKB/TrEMBL
	ENSRNOT00000120026	ENTREZGENE
	ENSRNOT00000120026.2	UniProtKB/TrEMBL
	ENSRNOT00000133368.1	UniProtKB/TrEMBL
	ENSRNOT00000152148.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1410.10	UniProtKB/TrEMBL
	3.30.460.10	UniProtKB/TrEMBL
	Zinc finger, CCHC-type	UniProtKB/TrEMBL
InterPro	MTPAP-like_central	UniProtKB/TrEMBL
	NT_sf	UniProtKB/TrEMBL
	PAP_assoc	UniProtKB/TrEMBL
	TUTase_dom	UniProtKB/TrEMBL
	Znf_CCHC	UniProtKB/TrEMBL
	Znf_CCHC_sf	UniProtKB/TrEMBL
NCBI Gene	501515	ENTREZGENE
PANTHER	POLY A POLYMERASE CID PAP -RELATED	UniProtKB/TrEMBL
	TERMINAL URIDYLYLTRANSFERASE 7	UniProtKB/TrEMBL
Pfam	MTPAP-like_central	UniProtKB/TrEMBL
	PAP_assoc	UniProtKB/TrEMBL
	TUTase	UniProtKB/TrEMBL
	TUTF7_u4	UniProtKB/TrEMBL
	zf-CCHC	UniProtKB/TrEMBL
PhenoGen	Tut7	PhenoGen
PROSITE	ZF_CCHC	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000016629	RatGTEx
SMART	ZnF_C2HC	UniProtKB/TrEMBL
Superfamily-SCOP	PAP/OAS1 substrate-binding domain	UniProtKB/TrEMBL
	SSF57756	UniProtKB/TrEMBL
	SSF81301	UniProtKB/TrEMBL
UniProt	A0A8I6GE00	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GKH2	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LWL5_RAT	UniProtKB/TrEMBL
	A0ABK0LWY3_RAT	UniProtKB/TrEMBL
	A6KAG4	ENTREZGENE, UniProtKB/TrEMBL
	A6KAG5	ENTREZGENE, UniProtKB/TrEMBL
	D3ZKR9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-04-27	Tut7	terminal uridylyl transferase 7	Zcchc6	zinc finger CCHC-type containing 6	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2016-02-17	Zcchc6	zinc finger CCHC-type containing 6	Zcchc6	zinc finger, CCHC domain containing 6	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-04-21	Zcchc6	zinc finger, CCHC domain containing 6	LOC501515	similar to Zinc finger CCHC domain-containing protein 6	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-19	LOC501515	similar to Zinc finger CCHC domain-containing protein 6			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations