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Gene: Ccdc191 (coiled-coil domain containing 191) Rattus norvegicus

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Symbol:

Ccdc191

Name:

coiled-coil domain containing 191

RGD ID:

1566314

Description:

Orthologous to human CCDC191 (coiled-coil domain containing 191); INTERACTS WITH 2,5-hexanedione; bisphenol A; 1,2-dimethylhydrazine (ortholog).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

coiled-coil domain-containing protein 191; LOC100363034; LOC288106; queuine tRNA-ribosyltransferase domain containing 1-like; RGD1566314; similar to KIAA1407

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CCDC191 (coiled-coil domain containing 191)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Ccdc191 (coiled-coil domain containing 191)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ccdc191 (coiled-coil domain containing 191)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CCDC191 (coiled-coil domain containing 191)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CCDC191 (coiled-coil domain containing 191)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ccdc191 (coiled-coil domain containing 191)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CCDC191 (coiled-coil domain containing 191)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CCDC191 (coiled-coil domain containing 191)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ccdc191 (coiled-coil domain containing 191)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ccdc191 (coiled-coil domain containing 191)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	CCDC191 (coiled-coil domain containing 191)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ccdc191 (coiled-coil domain containing 191)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ccdc191 (coiled-coil domain containing 191)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG17258	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG17258	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	ccdc191	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ccdc191	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	70,241,562 - 70,312,288 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	11	70,241,562 - 70,312,431 (-)	Ensembl				GRCr8
mRatBN7.2	11	56,735,655 - 56,806,372 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	56,735,652 - 56,806,375 (-)	Ensembl				mRatBN7.2
Rnor_6.0	11	61,678,138 - 61,748,773 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	61,678,045 - 61,748,768 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	11	60,808,540 - 60,882,521 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	11	58,302,057 - 58,373,397 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	11	56,288,727 - 56,359,335 (-)	NCBI		Celera
Cytogenetic Map	11	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,5-hexanedione (EXP)

2-palmitoylglycerol (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

chlorpyrifos (ISO)

folic acid (ISO)

methylmercury chloride (ISO)

nickel atom (ISO)

okadaic acid (ISO)

paracetamol (ISO)

resveratrol (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Ccdc191
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	70,241,562 - 70,312,288 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	11	70,241,562 - 70,312,431 (-)	Ensembl				GRCr8
mRatBN7.2	11	56,735,655 - 56,806,372 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	56,735,652 - 56,806,375 (-)	Ensembl				mRatBN7.2
Rnor_6.0	11	61,678,138 - 61,748,773 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	61,678,045 - 61,748,768 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	11	60,808,540 - 60,882,521 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	11	58,302,057 - 58,373,397 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	11	56,288,727 - 56,359,335 (-)	NCBI		Celera
Cytogenetic Map	11	q21	NCBI

CCDC191
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	113,964,137 - 114,056,613 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	113,964,137 - 114,056,594 (-)	Ensembl			hg38	GRCh38
GRCh37	3	113,682,984 - 113,775,460 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	115,165,674 - 115,258,150 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	3	115,165,675 - 115,258,150	NCBI
Celera	3	112,091,432 - 112,183,887 (-)	NCBI		Celera
Cytogenetic Map	3	q13.31	NCBI
HuRef	3	111,057,030 - 111,149,480 (-)	NCBI		HuRef
CHM1_1	3	113,646,347 - 113,738,820 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	116,685,401 - 116,777,888 (-)	NCBI		T2T-CHM13v2.0

Ccdc191
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	43,710,172 - 43,784,677 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	43,710,163 - 43,784,677 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	16	43,889,809 - 43,964,314 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	43,889,800 - 43,964,314 (+)	Ensembl			mm10	GRCm38
MGSCv37	16	43,890,015 - 43,964,427 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	16	43,813,410 - 43,883,027 (+)	NCBI		MGSCv36	mm8
Celera	16	44,245,653 - 44,319,476 (+)	NCBI		Celera
Cytogenetic Map	16	B4	NCBI
cM Map	16	28.44	NCBI

Ccdc191
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955427	14,061,203 - 14,138,751 (-)	Ensembl
ChiLan1.0	NW_004955427	14,060,863 - 14,138,850 (-)	NCBI	ChiLan1.0	ChiLan1.0

CCDC191
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	111,956,314 - 112,048,092 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	111,961,092 - 112,052,870 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	111,102,384 - 111,194,111 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	118,023,344 - 118,114,618 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	118,023,344 - 118,114,618 (-)	Ensembl			panPan2	panpan1.1

CCDC191
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	33	18,228,450 - 18,317,220 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	33	18,229,388 - 18,317,106 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	33	18,336,728 - 18,425,198 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	33	18,474,275 - 18,562,854 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	33	18,474,282 - 18,563,530 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	33	18,277,639 - 18,365,856 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	33	18,329,442 - 18,417,893 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	33	18,874,331 - 18,962,817 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ccdc191
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	135,995,607 - 136,069,220 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936536	1,451,845 - 1,526,411 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936536	1,451,845 - 1,526,329 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC191
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	145,880,093 - 145,981,116 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	13	145,879,963 - 145,981,138 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CCDC191
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	66,809,588 - 66,900,514 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	66,809,743 - 66,900,024 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666041	99,568,275 - 99,656,871 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc191
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	34,449,344 - 34,544,084 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624731	34,449,173 - 34,543,740 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ccdc191
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	28,789,256 - 28,855,569 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ccdc191
492 total Variants

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	22524746	82951192	Rat
1598841	Memor7	Memory QTL 7			exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	11	33306008	78306008	Rat
724554	Iddm17	Insulin dependent diabetes mellitus QTL 17		0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	46443168	91443168	Rat
1598811	Bp291	Blood pressure QTL 291	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	33306008	78306008	Rat
1581565	Pur10	Proteinuria QTL 10		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	58272363	96350770	Rat
4889859	Pur28	Proteinuria QTL 28	19.5	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	11	58928336	99753367	Rat
8694376	Bw156	Body weight QTL 156	2.25	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	36749459	81749459	Rat
10755497	Bp388	Blood pressure QTL 388	2.76		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	32943067	89836615	Rat
1300130	Rf20	Renal function QTL 20	4.44		kidney glomerulus integrity trait (VT:0010546)	kidney glomerulus diameter (CMO:0001166)	11	31915469	76915469	Rat
10058952	Gmadr6	Adrenal mass QTL 6	2.29	0.0072	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	36428416	81428416	Rat
1558659	Tescar1	Testicular tumor resistance QTL 1	3.9		testis integrity trait (VT:0010572)	percentage of study population developing testis tumors during a period of time (CMO:0001261)	11	34618760	79618760	Rat
1300135	Rf19	Renal function QTL 19	3.38		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	11	54415391	96071021	Rat
2298551	Neuinf10	Neuroinflammation QTL 10	3.7		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	11	58931822	92356038	Rat
2312566	Glom20	Glomerulus QTL 20	3.6	0.001	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	57754837	96071021	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	20193549	96351019	Rat
9589032	Epfw10	Epididymal fat weight QTL 10	9.29	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	11	36749459	81749459	Rat
724561	Plsm4	Polydactyly-luxate syndrome (PLS) morphotypes QTL 4		0.0003	forelimb integrity trait (VT:0010562)	front foot phalanges count (CMO:0001947)	11	67962184	99753367	Rat
9590313	Scort20	Serum corticosterone level QTL 20	6.51	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	11	36749459	81749459	Rat
4889521	Gluco62	Glucose level QTL 62	2.82	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	68599321	96497754	Rat
7411658	Foco27	Food consumption QTL 27	16.2	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	11	69855943	99753367	Rat
8694424	Bw162	Body weight QTL 162	3.8	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	36749459	81749459	Rat
1581572	Uae35	Urinary albumin excretion QTL 35		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	58272363	96350770	Rat
1300110	Stl7	Serum triglyceride level QTL 7	4.64		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	11	51071021	96071021	Rat
631510	Spl2	Serum phospholipid level QTL 2	4.1		blood phospholipid amount (VT:0006084)	serum phospholipid level (CMO:0001171)	11	27556685	72556685	Rat

Markers in Region

AU049393

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	56,783,733 - 56,783,973 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	61,726,128 - 61,726,369	NCBI	Rnor6.0
Rnor_5.0	11	60,859,898 - 60,860,139	UniSTS	Rnor5.0
RGSC_v3.4	11	58,350,188 - 58,350,429	UniSTS	RGSC3.4
Celera	11	56,336,883 - 56,337,124	UniSTS
Cytogenetic Map	11	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	91	59	6	355	191	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001067695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006221142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768763	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001840508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001845532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005491341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC114526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000078879 ⟹ ENSRNOP00000069093

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	70,241,562 - 70,312,431 (-)	Ensembl
mRatBN7.2 Ensembl	11	56,735,652 - 56,806,375 (-)	Ensembl
Rnor_6.0 Ensembl	11	61,678,045 - 61,748,768 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093431 ⟹ ENSRNOP00000076188

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	70,241,562 - 70,312,040 (-)	Ensembl
mRatBN7.2 Ensembl	11	56,735,652 - 56,806,136 (-)	Ensembl
Rnor_6.0 Ensembl	11	61,701,773 - 61,748,583 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093445 ⟹ ENSRNOP00000076276

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	11	61,678,138 - 61,698,595 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000167240 ⟹ ENSRNOP00000112813

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	70,241,562 - 70,309,919 (-)	Ensembl

RefSeq Acc Id:

NM_001427765 ⟹ NP_001414694

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,241,562 - 70,312,119 (-)	NCBI

RefSeq Acc Id:

XM_008768763 ⟹ XP_008766985

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,241,562 - 70,312,288 (-)	NCBI
mRatBN7.2	11	56,735,655 - 56,806,371 (-)	NCBI
Rnor_6.0	11	61,678,138 - 61,748,773 (-)	NCBI

Sequence:

show sequence

CCCCCCACCAATGCCATGGTAACAGCGCGAACTGCAAGCTGCCCGCGCTATGCCTCCTGGGAGG
AGTAGTTCCGGGATGTCTGACCCCTGTTTAGCTATTAAGTGGCGGAACTACAACTCCCAGCATC
ACCTGAAAGCAGTCTGGGAGGAGACGCGGTTGTCACTGTTGTGGCCCAAGTCTAGGCCTGCGCC
TGCAAAAATGCTGCTGGCGCCCCAGGGAGGGTTCGCCTCAAAGAAGAGGATGGAGCTGAGTCGC
TGGAAACGGTTATCAAGGAAGCTGAATCTCAAGTCTTCATTTGAGCCTGATAATGTGGGGCACT
GGATTAAGAGAGTAGAGAAGGCTTCAGAATTTGCCATTTCAAATACATATTCTACCAGAAATGC
AGATTTACCTGGAAGGTTTTGGCGACAAGCAGTAGATCTGGCAACATGTGAGCAAACAGAGTAT
CATGATGACGTCTATGAAGAAGCTCAGGAGCTAGTCAATGAGTGGCTGGACAACAAACTTAAAC
AAGAATTAGCAAGTGATGGAGAAGGGGAAAGCACGGTGCTGAGCAGCCCCCCTGTGCCAGATGC
CCATGGCCATTTGAAGTATGACAGATTTGATGATTTATGTGGCTATTTGGAGGAAGAAGAGGAA
AGTGCCACTGTGCAAAAATTTATAGAGCATCTGCTCCATAAAGAAGTGGTGGCTTCTGAGGTGG
TGGAAGAGCTTGGAATGAAGGAAAACCAAGGCAAGAGGCAGCAGAAGGACCCTCGTCTTACCAT
GGAGATGAGACATAAGCAGGTCAAAGAAAACCGCTTGAGACGTGAGAAACAGCTGGAGTCCCAG
AGAGTGGAAAGTGCCCTGAAAAAAGCAGCCTTCTTGGAGGCTCAGTGTCTAGTGCAAGAAGAGA
AGAAAAGGAAGGCTCTGCTGGCCAAGAAAGAGAAGGAGGAGATTCAGAGAGAGATGGTGAAGCT
TCGGAGGGAGATACTGGAAAGAAGGCACACAGTGGAAGAAGCGTGGAAAACAGAAAAGAAAAGG
CAAGAAGAAAGTTCTCAGAGGAATGCAGAGAGAAAAATGATGAAAAGTGCTCACATACATCTGG
GTGAGGAAAAAGTTGCAAAAGAAAGAAAAAGAGAACTAAGGGAGATACTAATCCGGACTTTCAA
AGAAAATCAACAGTGTCAAAAACGGTATTTCTCTGCCTGGCACAAGCTGATTCTGGATCATAGG
ATTAAGCTGGGGAAAGCAGGGACCCTGTCTGACTGGAAGCTTCAACTGAAGGTCCTGAGAGCCT
GGAGAGACCATACGCGATCCCAGAAGTTGGAACGAGAGACCAAAGCCTTGGAAAATGACCTTAG
GGAAGAAAACAGAAAACAACAGCTGGCTACTGAGTTTAACCGGAAACAAGTTCTTCGATACTGC
TTTGGTGGATGGCAGCGTTGGCATGGTTCAGAAGTTATAAAGAGGGAGCTGGCTTTGGCCAAGG
AGCAAACTAGGAAGAAAATGGATGAACTGCTTAAGGCAGCCTCCCTCGGGAAACTCAATTCTAA
GGGGTCATCAGGTATCGGTCTTCTCGCTGAGGCCCCGGCCGTGGTGGATCCAGCAGTGGGCAGT
GGAGAGGTCACTATCATGTCCCCTTTGTGGGAAAAGCCACCTGTGGAGAACAGTGGGTGTACAC
TCAGCCATTCCCCAGAAAGAACAACCAAGGGGAATTTCCAGGGTACTCTCCCAGATGTCTCTCA
GAACACTCCTGGCACAAAGCAGGCCAAGACTGCAGCAGGTGAGACCTCGGAACAGCCTGGTAGC
CGTGAAGATCCTGGGACCACTACGCAGGAAGCAGACGCGGTTTGTGTGGGGCATTTCCGCTGTC
ACCATGTCTACCAGCAACAGCTGATTGAGAAGCAGAAGAAGAAACTTGAGGAACAGCAGAAAAC
CATTCAGAAGCTGAAGGCAAACCAGTGGTTGGCTGAGGCCCGGCAGGCATCTGAACGTACCACA
GCGGCTACAGGAGGACACAGCTGCAGTCAATCAAATCTCAGAGGAGCAGGGGACCTGCAGGGAA
CCTGCCAGAGACTTCTGAACTCCTCTGTTCCATCTCTTAGGTGTAAAGATAGTAGAGCTGATTC
TAGAAAGCCTCTTTCTCCATCCAAAAGGACCCTGAAGCAGCCAACAGCACCCCATCCCTTACTG
AAAGCCATGGAAGAGAGAGCAATTCAACGAGCTGAACGTAGGCAGATCTTGGCAGAAAGGAAGA
AAAAACAAGAAGAAGACAAATTGGCACAGTTAAAGTCCCAAGAGGAAGAACGCCAAAAGAAGGA
TGCAGAAGAAAAGGAAGCCCAGCTGGAGAGAAAACGAGAGGAAAAGAGGCTGAAGAAGATGAAA
GAACTAGAGAAACAGAAGAGAATTCAAAGGAGTCAAGAGTTGGAAGCAGTAGCCAAAGGTCACT
ATGAAAAGACCTTGCTAAGGAAAAGAGGCCTGGAGCCCTGGAAGAGACTGAGAGTGCAAAGCAA
GCAAAACACTGAGGTAGCAGAAGAGCATCACTCTTTGACTTCACAGAGAAAGTGCCTGCTCAGC
TGGCTCCAGTACAGCCAGGAAAGGCTGGCTACGATGACAGCCAAGGCTGACCAGTTTTACTCCC
AGCTACTGTGTAGGAGAGTCATCCGGGGCTGGCTCCAGTACGTCAGTGATGTAGAGGAGGAAGT
CAGGAAGCTCTGTGTCTACTTACTGCAGAAGAAGACTTTCAAGGCCTGGCTTAGCACTGTCAAA
GAGCTGGAGATGGAGTCCCAGAAGAAGCTTAAGGTTGCTGCAGAACACTGTGACAGGAAGATTC
TCAGGGTCACACTGGAGATGTGGAAGGCATTTGTAAAACTTACCAAAGAAGACAGAGTCAGAGA
AGAGCGGCGAGACCAGCTCCGCCGGAAGGTGGCCGAAATCCTTCCAGACTTCCAGATGCTGGTG
CCATCGTGATGGCTGCACACCAGCAGCTACATGCTTGTCAGCCAAGGGCAGTCTTTGTGCCCGG
ATGTGCAGACAGACGGTCTGCACCCACACCCCTACCTGAGCCCGGCTTTCTTCTGGATGTGTCG
TAGGCCGGGGGTTATCTTGGGATTTGTGCTTCAGTCTTGCTCTCTCCTGGGTTGCTGGGCATCA
GTGGTGACGGCTGTCACAGGGGGTCATGGGAACAGTCTAGGGCACCACCGCTGAGTGCATTTTA
TACATTCTTAGTGTAATAAACTCTGAAGAGATGAGTACCTGCCTGGA

hide sequence

RefSeq Acc Id:

XM_039088898 ⟹ XP_038944826

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,256,244 - 70,312,288 (-)	NCBI
mRatBN7.2	11	56,750,337 - 56,806,371 (-)	NCBI

RefSeq Acc Id:

XM_039088899 ⟹ XP_038944827

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,241,562 - 70,296,014 (-)	NCBI
mRatBN7.2	11	56,735,655 - 56,790,110 (-)	NCBI

RefSeq Acc Id:

XR_005491341

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	70,261,105 - 70,312,288 (-)	NCBI
mRatBN7.2	11	56,755,198 - 56,806,371 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001414694	(Get FASTA)	NCBI Sequence Viewer
	XP_008766985	(Get FASTA)	NCBI Sequence Viewer
	XP_038944826	(Get FASTA)	NCBI Sequence Viewer
	XP_038944827	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000069093
	ENSRNOP00000069093.1
	ENSRNOP00000076188
	ENSRNOP00000076188.2
	ENSRNOP00000112813.1

RefSeq Acc Id:	XP_008766985 ⟸ XM_008768763
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JUG8 (UniProtKB/TrEMBL), A0A1W2Q6A6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPGRSSSGMSDPCLAIKWRNYNSQHHLKAVWEETRLSLLWPKSRPAPAKMLLAPQGGFASKKR MELSRWKRLSRKLNLKSSFEPDNVGHWIKRVEKASEFAISNTYSTRNADLPGRFWRQAVDLATC EQTEYHDDVYEEAQELVNEWLDNKLKQELASDGEGESTVLSSPPVPDAHGHLKYDRFDDLCGYL EEEEESATVQKFIEHLLHKEVVASEVVEELGMKENQGKRQQKDPRLTMEMRHKQVKENRLRREK QLESQRVESALKKAAFLEAQCLVQEEKKRKALLAKKEKEEIQREMVKLRREILERRHTVEEAWK TEKKRQEESSQRNAERKMMKSAHIHLGEEKVAKERKRELREILIRTFKENQQCQKRYFSAWHKL ILDHRIKLGKAGTLSDWKLQLKVLRAWRDHTRSQKLERETKALENDLREENRKQQLATEFNRKQ VLRYCFGGWQRWHGSEVIKRELALAKEQTRKKMDELLKAASLGKLNSKGSSGIGLLAEAPAVVD PAVGSGEVTIMSPLWEKPPVENSGCTLSHSPERTTKGNFQGTLPDVSQNTPGTKQAKTAAGETS EQPGSREDPGTTTQEADAVCVGHFRCHHVYQQQLIEKQKKKLEEQQKTIQKLKANQWLAEARQA SERTTAATGGHSCSQSNLRGAGDLQGTCQRLLNSSVPSLRCKDSRADSRKPLSPSKRTLKQPTA PHPLLKAMEERAIQRAERRQILAERKKKQEEDKLAQLKSQEEERQKKDAEEKEAQLERKREEKR LKKMKELEKQKRIQRSQELEAVAKGHYEKTLLRKRGLEPWKRLRVQSKQNTEVAEEHHSLTSQR KCLLSWLQYSQERLATMTAKADQFYSQLLCRRVIRGWLQYVSDVEEEVRKLCVYLLQKKTFKAW LSTVKELEMESQKKLKVAAEHCDRKILRVTLEMWKAFVKLTKEDRVREERRDQLRRKVAEILPD FQMLVPS hide sequence

Ensembl Acc Id:

ENSRNOP00000076276 ⟸ ENSRNOT00000093445

Ensembl Acc Id:

ENSRNOP00000076188 ⟸ ENSRNOT00000093431

Ensembl Acc Id:

ENSRNOP00000069093 ⟸ ENSRNOT00000078879

RefSeq Acc Id:	XP_038944827 ⟸ XM_039088899
- Peptide Label:	isoform X3
- UniProtKB:	A6IR20 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038944826 ⟸ XM_039088898
- Peptide Label:	isoform X2

RefSeq Acc Id:	NP_001414694 ⟸ NM_001427765
- UniProtKB:	A0A1W2Q6A6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000112813 ⟸ ENSRNOT00000167240

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JUG8-F1-model_v2	AlphaFold	A0A0G2JUG8	1-967	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698156

Promoter ID:

EPDNEW_R8679

Type:

single initiation site

Name:

Ccdc191_1

Description:

coiled-coil domain containing 191

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	11	61,748,611 - 61,748,671	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1566314	AgrOrtholog
BioCyc Gene	G2FUF-21334	BioCyc
Ensembl Genes	ENSRNOG00000057815	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000078879	ENTREZGENE
	ENSRNOT00000078879.3	UniProtKB/TrEMBL
	ENSRNOT00000093431	ENTREZGENE
	ENSRNOT00000093431.3	UniProtKB/TrEMBL
	ENSRNOT00000167240.1	UniProtKB/TrEMBL
InterPro	CACF_protein	UniProtKB/TrEMBL
KEGG Report	rno:288106	UniProtKB/TrEMBL
NCBI Gene	288106	ENTREZGENE
PANTHER	PTHR22028:SF5	UniProtKB/TrEMBL
	UNCHARACTERIZED	UniProtKB/TrEMBL
PhenoGen	Ccdc191	PhenoGen
RatGTEx	ENSRNOG00000057815	RatGTEx
UniProt	A0A0G2JUG8	ENTREZGENE, UniProtKB/TrEMBL
	A0A1W2Q6A6	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LPB0_RAT	UniProtKB/TrEMBL
	A6IR20	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-10-26	Ccdc191	coiled-coil domain containing 191	RGD1566314	similar to KIAA1407	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-07-29	RGD1566314	similar to KIAA1407	LOC100363034	queuine tRNA-ribosyltransferase domain containing 1-like	Data merged from RGD:2323561	737654	PROVISIONAL
2010-05-06	LOC100363034	queuine tRNA-ribosyltransferase domain containing 1-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-04-30	RGD1566314	similar to KIAA1407	RGD1566314_predicted	similar to KIAA1407 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1566314_predicted	similar to KIAA1407 (predicted)	LOC288106	similar to KIAA1407	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC288106	similar to KIAA1407			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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