Gene Ontology Annotations Click to see Annotation Detail View
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Gene Ontology Annotations Click to see Annotation Detail View
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| # | Reference Title | Reference Citation |
| 1. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
| 2. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
| Shisal1 (Rattus norvegicus - Norway rat) |
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| SHISAL1 (Homo sapiens - human) |
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| Shisal1 (Mus musculus - house mouse) |
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| Shisal1 (Chinchilla lanigera - long-tailed chinchilla) |
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| SHISAL1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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| SHISAL1 (Canis lupus familiaris - dog) |
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| Shisal1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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| SHISAL1 (Sus scrofa - pig) |
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| SHISAL1 (Chlorocebus sabaeus - green monkey) |
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| Shisal1 (Heterocephalus glaber - naked mole-rat) |
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| Shisal1 (Rattus rattus - black rat) |
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Variants in Shisal1
461 total Variants
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| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
| D1S2854 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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musculoskeletal system
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nervous system
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renal system
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reproductive system
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respiratory system
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sensory system
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visual system
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| 15 | 11 | 67 | 163 | 91 | 90 | 59 | 56 | 59 | 6 | 313 | 156 | 11 | 135 | 76 | 92 | 31 | 17 | 17 |
| RefSeq Transcripts | NM_001432011 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| NM_001432012 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| NM_001432013 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_008776529 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_008776530 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595270 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595271 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595272 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595273 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595274 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595275 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595276 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603467 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603468 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603469 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603470 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603471 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603472 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_039080313 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_039080314 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_039080315 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_063264451 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XR_001838989 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XR_001844456 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | CH473950 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| JAXUCZ010000007 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| Ensembl Acc Id: | ENSRNOT00000084666 ⟹ ENSRNOP00000071342 | ||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Ensembl Acc Id: | ENSRNOT00000095036 ⟹ ENSRNOP00000094188 | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | XM_017595274 ⟹ XP_017450763 | ||||||||||||||||
| Type: | CODING | ||||||||||||||||
| Position: |
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| Sequence: |
| RefSeq Acc Id: | XM_039080313 ⟹ XP_038936241 | ||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| RefSeq Acc Id: | XM_039080314 ⟹ XP_038936242 | ||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| RefSeq Acc Id: | XM_039080315 ⟹ XP_038936243 | ||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| RefSeq Acc Id: | XM_063264451 ⟹ XP_063120521 | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Protein RefSeqs | NP_001418940 | (Get FASTA) | NCBI Sequence Viewer |
| NP_001418941 | (Get FASTA) | NCBI Sequence Viewer | |
| NP_001418942 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017450763 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_038936241 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_038936242 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_038936243 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_063120521 | (Get FASTA) | NCBI Sequence Viewer | |
| GenBank Protein | EDM15603 | (Get FASTA) | NCBI Sequence Viewer |
| Ensembl Protein | ENSRNOP00000100011.1 | ||
| ENSRNOP00000102053 | |||
| ENSRNOP00000102053.1 | |||
| ENSRNOP00000104324.1 | |||
| ENSRNOP00000105114 | |||
| ENSRNOP00000105114.1 | |||
| ENSRNOP00000107161.1 | |||
| ENSRNOP00000112093.1 | |||
| ENSRNOP00000112366 | |||
| ENSRNOP00000112366.1 |
| RefSeq Acc Id: | XP_017450763 ⟸ XM_017595274 |
| - Peptide Label: | isoform X1 |
| - Sequence: |
| Ensembl Acc Id: | ENSRNOP00000071342 ⟸ ENSRNOT00000084666 |
| RefSeq Acc Id: | XP_038936242 ⟸ XM_039080314 |
| - Peptide Label: | isoform X1 |
| RefSeq Acc Id: | XP_038936243 ⟸ XM_039080315 |
| - Peptide Label: | isoform X2 |
| - UniProtKB: | D3ZJY8 (UniProtKB/TrEMBL), A6HTB9 (UniProtKB/TrEMBL) |
| RefSeq Acc Id: | XP_038936241 ⟸ XM_039080313 |
| - Peptide Label: | isoform X1 |
| Ensembl Acc Id: | ENSRNOP00000094188 ⟸ ENSRNOT00000095036 |
| RefSeq Acc Id: | XP_063120521 ⟸ XM_063264451 |
| - Peptide Label: | isoform X1 |
| - UniProtKB: | A6HTB9 (UniProtKB/TrEMBL), D3ZJY8 (UniProtKB/TrEMBL) |
| Name | Modeler | Protein Id | AA Range | Protein Structure |
| AF-D3ZJY8-F1-model_v2 | AlphaFold | D3ZJY8 | 1-199 | view protein structure |
| eQTL | View at Phenogen | |
| WGCNA | View at Phenogen | |
| Tissue/Strain Expression | View at Phenogen |
| Database | Acc Id | Source(s) |
| AGR Gene | RGD:1566029 | AgrOrtholog |
| BioCyc Gene | G2FUF-32576 | BioCyc |
| Ensembl Genes | ENSRNOG00000052725 | Ensembl |
| ENSRNOG00000078763 | ENTREZGENE, UniProtKB/TrEMBL | |
| Ensembl Transcript | ENSRNOT00000125768.1 | UniProtKB/TrEMBL |
| ENSRNOT00000130367 | ENTREZGENE | |
| ENSRNOT00000130367.1 | UniProtKB/TrEMBL | |
| ENSRNOT00000146072.1 | UniProtKB/TrEMBL | |
| ENSRNOT00000150419.1 | UniProtKB/TrEMBL | |
| ENSRNOT00000152309.1 | UniProtKB/TrEMBL | |
| ENSRNOT00000161056 | ENTREZGENE | |
| ENSRNOT00000161056.1 | UniProtKB/TrEMBL | |
| ENSRNOT00000170927 | ENTREZGENE | |
| ENSRNOT00000170927.1 | UniProtKB/TrEMBL | |
| InterPro | Shisa | UniProtKB/TrEMBL |
| Shisa_N | UniProtKB/TrEMBL | |
| KEGG Report | rno:500913 | UniProtKB/TrEMBL |
| NCBI Gene | 500913 | ENTREZGENE |
| PANTHER | PROTEIN SHISA-LIKE-1 | UniProtKB/TrEMBL |
| PTHR31395 | UniProtKB/TrEMBL | |
| Pfam | Shisa | UniProtKB/TrEMBL |
| PhenoGen | Shisal1 | PhenoGen |
| RatGTEx | ENSRNOG00000052725 | RatGTEx |
| ENSRNOG00000078763 | RatGTEx | |
| UniProt | A0ABK0KYG3_RAT | UniProtKB/TrEMBL |
| A0ABK0L9P8_RAT | UniProtKB/TrEMBL | |
| A0ABK0LFN8_RAT | UniProtKB/TrEMBL | |
| A0ABK0LWF1_RAT | UniProtKB/TrEMBL | |
| A6HTB9 | ENTREZGENE, UniProtKB/TrEMBL | |
| D3ZJY8 | ENTREZGENE, UniProtKB/TrEMBL |
| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2017-10-23 | Shisal1 | shisa like 1 | RGD1566029 | similar to mKIAA1644 protein | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
| 2008-04-30 | RGD1566029 | similar to mKIAA1644 protein | RGD1566029_predicted | similar to mKIAA1644 protein (predicted) | 'predicted' is removed | 2292626 | APPROVED |
| 2006-03-07 | RGD1566029_predicted | similar to mKIAA1644 protein (predicted) | LOC500913 | similar to mKIAA1644 protein | Symbol and Name status set to approved | 1299863 | APPROVED |
| 2006-02-09 | LOC500913 | similar to mKIAA1644 protein | Symbol and Name status set to provisional | 70820 | PROVISIONAL |