Lclat1 (lysocardiolipin acyltransferase 1) - Rat Genome Database

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Gene: Lclat1 (lysocardiolipin acyltransferase 1) Rattus norvegicus
Analyze
Symbol: Lclat1
Name: lysocardiolipin acyltransferase 1
RGD ID: 1565906
Description: Predicted to enable 1-acylglycerol-3-phosphate O-acyltransferase activity. Predicted to be involved in phosphatidylinositol acyl-chain remodeling. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human LCLAT1 (lysocardiolipin acyltransferase 1); PARTICIPATES IN glycerolipid metabolic pathway; glycerophospholipid metabolic pathway; INTERACTS WITH 17beta-estradiol; bisphenol A; indometacin.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC362702; Lycat; lysocardiolipin acyltransferase; RGD1565906; similar to lysocardiolipin acyltransferase isoform 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8627,980,749 - 28,125,076 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl627,982,936 - 28,112,511 (-)EnsemblGRCr8
mRatBN7.2622,228,933 - 22,373,246 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl622,228,942 - 22,373,181 (-)EnsemblmRatBN7.2
Rnor_6.0624,377,398 - 24,515,412 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl624,377,327 - 24,515,737 (+)Ensemblrn6Rnor6.0
Rnor_5.0634,225,525 - 34,365,002 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4622,289,610 - 22,443,820 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera621,770,800 - 21,911,029 (-)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15152008   PMID:16620771   PMID:18364741   PMID:18605246   PMID:19075029   PMID:19946888  


Genomics

Comparative Map Data
Lclat1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8627,980,749 - 28,125,076 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl627,982,936 - 28,112,511 (-)EnsemblGRCr8
mRatBN7.2622,228,933 - 22,373,246 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl622,228,942 - 22,373,181 (-)EnsemblmRatBN7.2
Rnor_6.0624,377,398 - 24,515,412 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl624,377,327 - 24,515,737 (+)Ensemblrn6Rnor6.0
Rnor_5.0634,225,525 - 34,365,002 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4622,289,610 - 22,443,820 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera621,770,800 - 21,911,029 (-)NCBICelera
Cytogenetic Map6q14NCBI
LCLAT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38230,447,246 - 30,644,225 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl230,447,221 - 30,644,225 (+)Ensemblhg38GRCh38
GRCh37230,670,112 - 30,867,091 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36230,523,627 - 30,720,595 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34230,581,773 - 30,778,741NCBI
Celera230,513,207 - 30,710,198 (+)NCBICelera
Cytogenetic Map2p23.1NCBI
HuRef230,408,128 - 30,605,091 (+)NCBIHuRef
CHM1_1230,600,385 - 30,797,383 (+)NCBICHM1_1
T2T-CHM13v2.0230,491,581 - 30,688,529 (+)NCBIT2T-CHM13v2.0
Lclat1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391773,414,980 - 73,550,363 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1773,414,980 - 73,550,363 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381773,107,985 - 73,243,368 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1773,107,985 - 73,243,368 (+)Ensemblmm10GRCm38
MGSCv371773,457,325 - 73,592,708 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361773,012,867 - 73,148,250 (+)NCBIMGSCv36mm8
Celera1777,394,638 - 77,527,739 (+)NCBICelera
Cytogenetic Map17E1.3- E2NCBI
cM Map1744.79NCBI
Lclat1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546912,234,689 - 12,431,951 (+)Ensembl
ChiLan1.0NW_00495546912,234,689 - 12,431,951 (+)NCBIChiLan1.0ChiLan1.0
LCLAT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21295,854,337 - 96,050,867 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A95,858,311 - 96,054,831 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A30,460,068 - 30,656,570 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A30,534,969 - 30,730,162 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A30,534,986 - 30,730,162 (+)EnsemblpanPan2panpan1.1
LCLAT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11724,128,102 - 24,322,502 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1724,128,102 - 24,318,949 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1723,920,499 - 24,115,081 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01724,689,613 - 24,884,054 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1724,689,639 - 24,884,056 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11723,994,783 - 24,187,674 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01724,057,720 - 24,249,972 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01724,157,317 - 24,349,921 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Lclat1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629268,257,309 - 68,433,021 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364932,406,525 - 2,503,053 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364932,405,556 - 2,582,264 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LCLAT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3108,690,896 - 108,882,030 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.13108,694,373 - 108,813,625 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23115,418,064 - 115,537,590 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LCLAT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11476,872,878 - 77,089,641 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1476,872,889 - 77,089,486 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604534,991,890 - 35,215,213 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lclat1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473812,407,542 - 12,510,662 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473812,336,433 - 12,510,570 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Lclat1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1719,978,976 - 20,108,110 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Lclat1
269 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:13
Count of miRNA genes:12
Interacting mature miRNAs:13
Transcripts:ENSRNOT00000043641
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6197587946975879Rat
8693645Alc31Alcohol consumption QTL 313.70.038drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)62328466429732046Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)62009763565097635Rat
8552910Pigfal5Plasma insulin-like growth factor 1 level QTL 54.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)62265388967653889Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)62009763565097635Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6323998948239989Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6197587946975879Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6197587946975879Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6144788383Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6197587946975879Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6197587946975879Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
2301964Bp323Blood pressure QTL 3234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6186868070Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6323998948239989Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6323998948239989Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6140163351Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)61459947363457687Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)61608937261967788Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6323998948239989Rat
1359023Bp272Blood pressure QTL 2722.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)62228825732981219Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)62228825767288257Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 89 59 6 353 189 11 143 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001431929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039113077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039113078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039113079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039113081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039113082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039113083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000043641   ⟹   ENSRNOP00000050960
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl627,982,936 - 28,108,222 (-)Ensembl
mRatBN7.2 Ensembl622,231,976 - 22,373,181 (-)Ensembl
Rnor_6.0 Ensembl624,377,327 - 24,515,737 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000105183   ⟹   ENSRNOP00000091643
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl622,228,942 - 22,368,772 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000160802   ⟹   ENSRNOP00000112795
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl627,982,936 - 28,112,511 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000166282   ⟹   ENSRNOP00000112548
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl627,982,936 - 28,093,395 (-)Ensembl
RefSeq Acc Id: XM_039113077   ⟹   XP_038969005
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8627,980,749 - 28,125,032 (-)NCBI
mRatBN7.2622,228,933 - 22,373,222 (-)NCBI
RefSeq Acc Id: XM_039113078   ⟹   XP_038969006
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8627,980,749 - 28,125,053 (-)NCBI
mRatBN7.2622,228,933 - 22,373,193 (-)NCBI
RefSeq Acc Id: XM_039113079   ⟹   XP_038969007
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8627,980,749 - 28,125,049 (-)NCBI
mRatBN7.2622,228,933 - 22,373,215 (-)NCBI
RefSeq Acc Id: XM_039113081   ⟹   XP_038969009
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8627,980,749 - 28,125,076 (-)NCBI
mRatBN7.2622,228,933 - 22,373,246 (-)NCBI
RefSeq Acc Id: XM_039113082   ⟹   XP_038969010
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8627,980,749 - 28,125,057 (-)NCBI
mRatBN7.2622,228,933 - 22,373,224 (-)NCBI
RefSeq Acc Id: XM_039113083   ⟹   XP_038969011
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8627,980,749 - 28,125,032 (-)NCBI
mRatBN7.2622,228,933 - 22,373,214 (-)NCBI
RefSeq Acc Id: XM_063262740   ⟹   XP_063118810
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8627,980,749 - 28,125,033 (-)NCBI
RefSeq Acc Id: XM_063262741   ⟹   XP_063118811
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8627,980,749 - 28,125,033 (-)NCBI
Ensembl Acc Id: ENSRNOP00000050960   ⟸   ENSRNOT00000043641
RefSeq Acc Id: XP_038969009   ⟸   XM_039113081
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038969010   ⟸   XM_039113082
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038969005   ⟸   XM_039113077
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038969007   ⟸   XM_039113079
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038969011   ⟸   XM_039113083
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038969006   ⟸   XM_039113078
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000091643   ⟸   ENSRNOT00000105183
RefSeq Acc Id: XP_063118811   ⟸   XM_063262741
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063118810   ⟸   XM_063262740
- Peptide Label: isoform X1
- UniProtKB: A6HA05 (UniProtKB/TrEMBL),   D3ZFF4 (UniProtKB/TrEMBL),   A0A8I6AFV0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000112548   ⟸   ENSRNOT00000166282
Ensembl Acc Id: ENSRNOP00000112795   ⟸   ENSRNOT00000160802
Protein Domains
Phospholipid/glycerol acyltransferase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZFF4-F1-model_v2 AlphaFold D3ZFF4 1-376 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694432
Promoter ID:EPDNEW_R4947
Type:initiation region
Name:Lclat1_1
Description:lysocardiolipin acyltransferase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0624,377,346 - 24,377,406EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565906 AgrOrtholog
BioCyc Gene G2FUF-38416 BioCyc
Ensembl Genes ENSRNOG00000034026 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000043641 ENTREZGENE
  ENSRNOT00000043641.7 UniProtKB/TrEMBL
  ENSRNOT00000160802 ENTREZGENE
  ENSRNOT00000160802.1 UniProtKB/TrEMBL
  ENSRNOT00000166282 ENTREZGENE
  ENSRNOT00000166282.1 UniProtKB/TrEMBL
InterPro Acyltransf_C UniProtKB/TrEMBL
  Acyltransferase UniProtKB/TrEMBL
NCBI Gene 362702 ENTREZGENE
PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED UniProtKB/TrEMBL
  LYSOCARDIOLIPIN ACYLTRANSFERASE 1 UniProtKB/TrEMBL
Pfam Acyltransf_C UniProtKB/TrEMBL
  Acyltransferase UniProtKB/TrEMBL
PhenoGen Lclat1 PhenoGen
RatGTEx ENSRNOG00000034026 RatGTEx
SMART PlsC UniProtKB/TrEMBL
Superfamily-SCOP Glycerol-3-phosphate (1)-acyltransferase UniProtKB/TrEMBL
UniProt A0A8I6AFV0 ENTREZGENE
  A0ABK0LNG8_RAT UniProtKB/TrEMBL
  A0ABK0M8Z0_RAT UniProtKB/TrEMBL
  A6HA05 ENTREZGENE, UniProtKB/TrEMBL
  D3ZFF4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-04-23 Lclat1  lysocardiolipin acyltransferase 1  Lycat  lysocardiolipin acyltransferase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Lycat  lysocardiolipin acyltransferase  RGD1565906_predicted  similar to lysocardiolipin acyltransferase isoform 1 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1565906_predicted  similar to lysocardiolipin acyltransferase isoform 1 (predicted)  LOC362702  similar to lysocardiolipin acyltransferase isoform 1  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC362702  similar to lysocardiolipin acyltransferase isoform 1      Symbol and Name status set to provisional 70820 PROVISIONAL