Hsf2bp (heat shock transcription factor 2 binding protein) - Rat Genome Database

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Gene: Hsf2bp (heat shock transcription factor 2 binding protein) Rattus norvegicus
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Symbol: Hsf2bp
Name: heat shock transcription factor 2 binding protein
RGD ID: 1565879
Description: Predicted to be involved in meiosis I and spermatogenesis. Predicted to be located in chromosome and nucleoplasm. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in primary ovarian insufficiency 19. Orthologous to human HSF2BP (heat shock transcription factor 2 binding protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: heat shock factor 2-binding protein; LOC499413; RGD1565879; similar to heat shock transcription factor 2 binding protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82010,035,263 - 10,121,262 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2010,035,263 - 10,121,826 (-)EnsemblGRCr8
mRatBN7.22010,035,562 - 10,123,059 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2010,035,562 - 10,121,242 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2010,736,370 - 10,821,077 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02010,097,268 - 10,181,975 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02010,567,927 - 10,653,252 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd2010,361,100 - 10,445,446 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive2011,356,933 - 11,441,275 (-)NCBILyon_Normotensive
Lyon_Hypertensive2011,360,016 - 11,444,358 (-)NCBILyon_Hypertensive
F344_StmMcwi2010,372,987 - 10,457,335 (-)NCBIF344_StmMcwi
Rnor_6.02010,757,172 - 10,844,177 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2010,757,854 - 10,844,178 (-)Ensemblrn6Rnor6.0
Rnor_5.02012,929,345 - 13,015,990 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42010,366,835 - 10,452,266 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2011,545,996 - 11,631,621 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
chromosome  (IEA,ISO)
cytosol  (IBA)
nucleoplasm  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:16780588  


Genomics

Comparative Map Data
Hsf2bp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82010,035,263 - 10,121,262 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2010,035,263 - 10,121,826 (-)EnsemblGRCr8
mRatBN7.22010,035,562 - 10,123,059 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2010,035,562 - 10,121,242 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2010,736,370 - 10,821,077 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02010,097,268 - 10,181,975 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02010,567,927 - 10,653,252 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd2010,361,100 - 10,445,446 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive2011,356,933 - 11,441,275 (-)NCBILyon_Normotensive
Lyon_Hypertensive2011,360,016 - 11,444,358 (-)NCBILyon_Hypertensive
F344_StmMcwi2010,372,987 - 10,457,335 (-)NCBIF344_StmMcwi
Rnor_6.02010,757,172 - 10,844,177 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2010,757,854 - 10,844,178 (-)Ensemblrn6Rnor6.0
Rnor_5.02012,929,345 - 13,015,990 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42010,366,835 - 10,452,266 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2011,545,996 - 11,631,621 (-)NCBICelera
Cytogenetic Map20p12NCBI
HSF2BP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382143,444,972 - 43,659,488 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2143,529,186 - 43,659,504 (-)Ensemblhg38GRCh38
GRCh372144,949,066 - 45,079,369 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362143,773,500 - 43,903,802 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342143,773,500 - 43,903,802NCBI
Celera2130,055,601 - 30,185,204 (-)NCBICelera
Cytogenetic Map21q22.3NCBI
HuRef2130,317,613 - 30,447,221 (-)NCBIHuRef
CHM1_12144,510,276 - 44,640,115 (-)NCBICHM1_1
T2T-CHM13v2.02141,831,697 - 42,015,233 (-)NCBIT2T-CHM13v2.0
Hsf2bp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391732,163,743 - 32,253,869 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1732,163,743 - 32,255,323 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381731,944,769 - 32,034,895 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1731,944,769 - 32,036,349 (-)Ensemblmm10GRCm38
MGSCv371732,081,714 - 32,171,453 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361731,673,479 - 31,763,609 (-)NCBIMGSCv36mm8
Celera1732,861,327 - 32,951,080 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.25NCBI
Hsf2bp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540738,577,789 - 38,671,929 (+)Ensembl
ChiLan1.0NW_00495540738,577,463 - 38,671,929 (+)NCBIChiLan1.0ChiLan1.0
HSF2BP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22239,537,490 - 39,665,966 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12134,388,587 - 34,516,626 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02129,787,768 - 29,916,089 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12143,088,011 - 43,214,760 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2143,088,012 - 43,214,760 (-)EnsemblpanPan2panpan1.1
HSF2BP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13137,543,448 - 37,643,534 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3137,503,052 - 37,643,505 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3136,697,994 - 36,799,702 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03137,086,703 - 37,186,586 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3137,085,041 - 37,188,576 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13136,954,895 - 37,056,249 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03136,939,941 - 37,041,634 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03137,432,489 - 37,534,200 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Hsf2bp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497136,791,828 - 36,867,636 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936500600,656 - 675,997 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936500600,628 - 676,201 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HSF2BP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13206,545,354 - 206,629,156 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113206,545,353 - 206,629,151 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213216,653,123 - 216,696,922 (+)NCBISscrofa10.2Sscrofa10.2susScr3
HSF2BP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1287,262,882 - 87,434,217 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605415,375,114 - 15,500,819 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hsf2bp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474527,388,239 - 27,462,569 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474527,387,287 - 27,463,057 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Hsf2bp
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1181,833,423 - 1,915,602 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Hsf2bp
836 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:166
Count of miRNA genes:123
Interacting mature miRNAs:147
Transcripts:ENSRNOT00000001580
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)20418947649189476Rat
4889870Pur30Proteinuria QTL 30190.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20804392029865039Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124164241Rat
4889857Pur27Proteinuria QTL 2712.20.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20127341128Rat
1598870Bp289Blood pressure QTL 2892.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)20821635953216359Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129193376Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20129193376Rat
1581577Pur15Proteinuria QTL 154.380.0002urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)20804392015089182Rat
1598858Cm61Cardiac mass QTL 613.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)20821635953216359Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578510Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20126925056Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20133724594Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20126128279Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600300Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20153308346533083Rat
1558640Prcs2Prostate cancer susceptibility QTL 23.3prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)20134066551Rat
1331772Cdexp2CD45RC expression in CD8 T cells QTL 25.7CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)20362632310078622Rat
631265Iresp1Immunoglobin response QTL18.3blood anti-double stranded DNA antibody amount (VT:0004762)serum anti-DNA antibody level (CMO:0001533)20904109911115921Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129193376Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20129193376Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20129193376Rat
61432Cia1Collagen induced arthritis QTL 1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)20114100378Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127341128Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127341128Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600300Rat

Markers in Region
D20Rat31  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr82010,078,399 - 10,078,622 (+)Marker Load Pipeline
mRatBN7.22010,078,696 - 10,078,919 (+)MAPPERmRatBN7.2
Rnor_6.02010,800,308 - 10,800,530NCBIRnor6.0
Rnor_5.02012,972,481 - 12,972,703UniSTSRnor5.0
RGSC_v3.42010,410,005 - 10,410,227UniSTSRGSC3.4
RGSC_v3.42010,410,004 - 10,410,227RGDRGSC3.4
Celera2011,589,058 - 11,589,280UniSTS
RGSC_v3.12010,410,232 - 10,410,454RGD
RH 3.4 Map20152.9RGD
RH 3.4 Map20152.9UniSTS
RH 2.0 Map20147.9RGD
SHRSP x BN Map2011.54RGD
FHH x ACI Map204.6798RGD
Cytogenetic Map20p12UniSTS
D20Rat74  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr82010,078,399 - 10,078,614 (+)Marker Load Pipeline
mRatBN7.22010,078,696 - 10,078,911 (+)MAPPERmRatBN7.2
Rnor_6.02010,800,308 - 10,800,522NCBIRnor6.0
Rnor_5.02012,972,481 - 12,972,695UniSTSRnor5.0
RGSC_v3.42010,410,004 - 10,410,219RGDRGSC3.4
RGSC_v3.42010,410,005 - 10,410,219UniSTSRGSC3.4
Celera2011,589,058 - 11,589,272UniSTS
RGSC_v3.12010,410,232 - 10,410,446RGD
RH 3.4 Map20151.0UniSTS
RH 3.4 Map20151.0RGD
RH 2.0 Map20147.9RGD
Cytogenetic Map20p12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 64 152 91 90 59 59 59 6 314 156 11 131 75 92 31 15 15

Sequence


Ensembl Acc Id: ENSRNOT00000001580   ⟹   ENSRNOP00000001580
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2010,035,263 - 10,120,943 (-)Ensembl
mRatBN7.2 Ensembl2010,035,562 - 10,121,242 (-)Ensembl
Rnor_6.0 Ensembl2010,757,854 - 10,842,370 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000079207   ⟹   ENSRNOP00000071827
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2010,036,570 - 10,120,943 (-)Ensembl
mRatBN7.2 Ensembl2010,037,500 - 10,121,242 (-)Ensembl
Rnor_6.0 Ensembl2010,758,367 - 10,844,178 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000149910   ⟹   ENSRNOP00000110974
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2010,035,263 - 10,121,826 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000155117   ⟹   ENSRNOP00000103748
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2010,071,108 - 10,120,943 (-)Ensembl
RefSeq Acc Id: NM_001127683   ⟹   NP_001121155
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82010,035,263 - 10,120,943 (-)NCBI
mRatBN7.22010,035,562 - 10,121,242 (-)NCBI
Dahl_SR_JrHsd2010,361,100 - 10,445,446 (-)NCBI
Lyon_Normotensive2011,356,933 - 11,441,275 (-)NCBI
Lyon_Hypertensive2011,360,016 - 11,444,358 (-)NCBI
F344_StmMcwi2010,372,987 - 10,457,335 (-)NCBI
Rnor_6.02010,757,172 - 10,842,370 (-)NCBI
Rnor_5.02012,929,345 - 13,015,990 (-)NCBI
RGSC_v3.42010,366,835 - 10,452,266 (-)RGD
Celera2011,545,996 - 11,631,621 (-)RGD
Sequence:
RefSeq Acc Id: XM_039099002   ⟹   XP_038954930
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82010,071,246 - 10,121,262 (-)NCBI
mRatBN7.22010,069,640 - 10,121,514 (-)NCBI
RefSeq Acc Id: XM_039099004   ⟹   XP_038954932
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82010,036,557 - 10,121,212 (-)NCBI
mRatBN7.22010,037,362 - 10,121,507 (-)NCBI
RefSeq Acc Id: XM_063279457   ⟹   XP_063135527
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82010,072,983 - 10,121,257 (-)NCBI
RefSeq Acc Id: NP_001121155   ⟸   NM_001127683
- UniProtKB: G3V646 (UniProtKB/TrEMBL),   A6JK16 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000071827   ⟸   ENSRNOT00000079207
Ensembl Acc Id: ENSRNOP00000001580   ⟸   ENSRNOT00000001580
RefSeq Acc Id: XP_038954932   ⟸   XM_039099004
- Peptide Label: isoform X2
- UniProtKB: A0A0G2K1G2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038954930   ⟸   XM_039099002
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063135527   ⟸   XM_063279457
- Peptide Label: isoform X3
- UniProtKB: B0BNC3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000110974   ⟸   ENSRNOT00000149910
Ensembl Acc Id: ENSRNOP00000103748   ⟸   ENSRNOT00000155117

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V646-F1-model_v2 AlphaFold G3V646 1-338 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565879 AgrOrtholog
BioCyc Gene G2FUF-4289 BioCyc
Ensembl Genes ENSRNOG00000001193 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000001580.8 UniProtKB/TrEMBL
  ENSRNOT00000079207 ENTREZGENE
  ENSRNOT00000079207.3 UniProtKB/TrEMBL
  ENSRNOT00000149910 ENTREZGENE
  ENSRNOT00000149910.1 UniProtKB/TrEMBL
  ENSRNOT00000155117.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7112979 IMAGE-MGC_LOAD
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  HSF2BP UniProtKB/TrEMBL
KEGG Report rno:499413 UniProtKB/TrEMBL
MGC_CLONE MGC:188036 IMAGE-MGC_LOAD
NCBI Gene 499413 ENTREZGENE
PANTHER HEAT SHOCK FACTOR 2-BINDING PROTEIN UniProtKB/TrEMBL
  PTHR15434 UniProtKB/TrEMBL
PhenoGen Hsf2bp PhenoGen
RatGTEx ENSRNOG00000001193 RatGTEx
Superfamily-SCOP ARM-type_fold UniProtKB/TrEMBL
UniProt A0A0G2K1G2 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LG13_RAT UniProtKB/TrEMBL
  A0ABK0M274_RAT UniProtKB/TrEMBL
  A6JK16 ENTREZGENE, UniProtKB/TrEMBL
  B0BNC3 ENTREZGENE, UniProtKB/TrEMBL
  G3V646 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-07 Hsf2bp  heat shock transcription factor 2 binding protein  RGD1565879_predicted  similar to heat shock transcription factor 2 binding protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1565879_predicted  similar to heat shock transcription factor 2 binding protein (predicted)  LOC499413  similar to heat shock transcription factor 2 binding protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC499413  similar to heat shock transcription factor 2 binding protein      Symbol and Name status set to provisional 70820 PROVISIONAL