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Gene: Naaladl2 (N-acetylated alpha-linked acidic dipeptidase-like 2) Rattus norvegicus

Analyze

Symbol:

Naaladl2

Name:

N-acetylated alpha-linked acidic dipeptidase-like 2

RGD ID:

1565147

Description:

Predicted to act upstream of or within response to bacterium. Predicted to be located in plasma membrane. Orthologous to human NAALADL2 (N-acetylated alpha-linked acidic dipeptidase like 2); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2; LOC499583; RGD1565147; similar to N-acetylated alpha-linked acidic dipeptidase 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	108,568,000 - 109,920,650 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	108,573,985 - 109,920,756 (-)	Ensembl				GRCr8
mRatBN7.2	2	106,639,146 - 107,992,218 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	106,645,608 - 107,991,689 (-)	Ensembl				mRatBN7.2
Rnor_6.0	2	109,092,931 - 110,424,885 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	2	129,188,477 - 130,141,769 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	109,460,670 - 110,229,521 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	101,923,114 - 102,904,044 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2-dichloroethane (ISO)

1,4-dioxane (ISO)

17beta-estradiol (EXP,ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

clotrimazole (EXP)

furan (EXP)

hexadecanoic acid (ISO)

inulin (ISO)

Lasiocarpine (ISO)

methimazole (EXP)

Monobutylphthalate (ISO)

N-Nitrosopyrrolidine (ISO)

O-methyleugenol (ISO)

paraquat (EXP)

perfluorooctane-1-sulfonic acid (ISO)

resveratrol (ISO)

rofecoxib (ISO)

sodium arsenite (ISO)

testosterone (EXP)

tetrachloromethane (EXP,ISO)

Triptolide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

response to bacterium (ISO)

Cellular Component

nucleoplasm (IEA,ISO)

plasma membrane (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:23012479

Genomics

Comparative Map Data

Naaladl2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	108,568,000 - 109,920,650 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	108,573,985 - 109,920,756 (-)	Ensembl				GRCr8
mRatBN7.2	2	106,639,146 - 107,992,218 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	106,645,608 - 107,991,689 (-)	Ensembl				mRatBN7.2
Rnor_6.0	2	109,092,931 - 110,424,885 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	2	129,188,477 - 130,141,769 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	109,460,670 - 110,229,521 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	101,923,114 - 102,904,044 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

NAALADL2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	174,440,982 - 175,810,548 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	174,438,573 - 175,810,548 (+)	Ensembl			hg38	GRCh38
GRCh37	3	174,577,124 - 175,528,336 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	176,059,805 - 177,006,122 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	3	172,978,213 - 173,925,324 (+)	NCBI		Celera
Cytogenetic Map	3	q26.31	NCBI
HuRef	3	171,954,904 - 172,901,669 (+)	NCBI		HuRef
CHM1_1	3	174,540,271 - 175,486,865 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	177,225,521 - 178,605,522 (+)	NCBI		T2T-CHM13v2.0

Naaladl2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	23,852,267 - 25,198,425 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	23,852,266 - 25,198,425 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	3	23,798,103 - 25,144,149 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	23,798,102 - 25,144,261 (-)	Ensembl			mm10	GRCm38
MGSCv37	3	24,360,715 - 24,399,979 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	3	24,602,938 - 24,974,616 (-)	NCBI		MGSCv36	mm8
Celera	3	24,161,729 - 24,324,911 (-)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI
cM Map	3	9.24	NCBI

Naaladl2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	4,705,197 - 5,553,907 (+)	Ensembl
ChiLan1.0	NW_004955420	4,325,331 - 5,554,156 (+)	NCBI	ChiLan1.0	ChiLan1.0

NAALADL2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	172,323,749 - 173,699,095 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	172,328,599 - 173,704,284 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	171,494,088 - 172,869,468 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	180,088,769 - 181,036,468 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	180,088,897 - 181,034,039 (+)	Ensembl			panPan2	panpan1.1

NAALADL2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	38,399,360 - 39,629,061 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	38,750,483 - 39,626,586 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	47,457,637 - 48,643,519 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	38,546,298 - 39,736,901 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	38,855,790 - 39,734,429 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	38,455,607 - 39,652,369 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	38,433,193 - 39,621,035 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	38,695,728 - 39,882,843 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Naaladl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	105,739,583 - 106,205,286 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936703	1,930,468 - 2,572,460 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936703	2,438,002 - 2,460,920 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NAALADL2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	113,236,156 - 114,208,075 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	13	112,850,111 - 114,215,614 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	121,965,713 - 122,650,822 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NAALADL2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	13,545,846 - 14,618,740 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	13,548,093 - 14,249,703 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666063	22,663,315 - 22,977,997 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Naaladl2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	52,990,066 - 53,783,430 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624730	52,457,655 - 53,749,142 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Naaladl2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	3	129,582,334 - 130,472,357 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Naaladl2
9371 total Variants

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2293671	Bss44	Bone structure and strength QTL 44	10.97	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	2	105628029	150628029	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
1598865	Bp296	Blood pressure QTL 296	2.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	82947902	127947902	Rat
1578772	Stresp14	Stress response QTL 14	5	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	2	84056790	132859658	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845370	229470703	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	83465462	229820014	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	20695736	231474293	Rat
1581576	Pur7	Proteinuria QTL 7		0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	80396178	220931218	Rat
61392	Bp6	Blood pressure QTL 6	7		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	2	82214549	127214549	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
152025242	Bw191	Body weight QTL 191	3.62		body mass (VT:0001259)		2	40306867	124537199	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	78269809	208420281	Rat
7488933	Bp368	Blood pressure QTL 368		0.004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	104957381	149957381	Rat
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	27148328	145807373	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	80396178	220931218	Rat
2317886	Alcrsp23	Alcohol response QTL 23	2.4	0.63	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	95142371	140142371	Rat
2317058	Aia13	Adjuvant induced arthritis QTL 13	2.9		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	2	78269809	123269809	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	159440891	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	4265106	205135428	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	44537979	159440891	Rat
1300155	Bp174	Blood pressure QTL 174	4.09		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	2	44537979	112567334	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	27148557	159440760	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	83465462	225110681	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	47856345	205135428	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	159440891	Rat
1359035	Bp276	Blood pressure QTL 276			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	100807373	145807373	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	44537979	184731399	Rat
8662836	Vetf8	Vascular elastic tissue fragility QTL 8	0.66		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	106869825	151869825	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845182	205135428	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	27148557	159440760	Rat
2306903	Bp336	Blood pressure QTL 336		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	38426449	111295694	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	83400752	223709938	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	28652666	139067443	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	76328396	209350714	Rat
2299162	Iddm32	Insulin dependent diabetes mellitus QTL 32	2.36		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	93602631	145807373	Rat
152025206	Hrtrt23	Heart rate QTL 23	5.98		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
152025204	Hrtrt22	Heart rate QTL 22	5.6		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	80396034	220931416	Rat
61438	Cia7	Collagen induced arthritis QTL 7	4.6	0.0001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	2	61051541	143746880	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	78269809	205135428	Rat

Markers in Region

D2Mit17

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	106,741,551 - 106,741,741 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	109,518,711 - 109,518,900	NCBI	Rnor6.0
Rnor_5.0	2	129,243,056 - 129,243,245	UniSTS	Rnor5.0
RGSC_v3.4	2	109,557,815 - 109,558,005	RGD	RGSC3.4
RGSC_v3.4	2	109,557,816 - 109,558,005	UniSTS	RGSC3.4
Celera	2	102,024,881 - 102,025,070	UniSTS
RGSC_v3.1	2	109,502,778 - 109,502,967	RGD
RH 3.4 Map	2	751.6	UniSTS
RH 3.4 Map	2	751.6	RGD
SHRSP x BN Map	2	37.6698	UniSTS
SHRSP x BN Map	2	37.6698	RGD
Cytogenetic Map	2	q24	UniSTS

D2Got184

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	107,565,811 - 107,565,947 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	110,353,145 - 110,353,280	NCBI	Rnor6.0
Rnor_5.0	2	130,071,153 - 130,071,288	UniSTS	Rnor5.0
RGSC_v3.4	2	110,404,665 - 110,404,801	RGD	RGSC3.4
RGSC_v3.4	2	110,404,666 - 110,404,801	UniSTS	RGSC3.4
Celera	2	102,832,080 - 102,832,215	UniSTS
RGSC_v3.1	2	110,349,628 - 110,349,763	RGD
RH 3.4 Map	2	755.4	RGD
RH 3.4 Map	2	755.4	UniSTS
Cytogenetic Map	2	q24	UniSTS

BE113707

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	107,577,282 - 107,577,441 (-)	MAPPER	mRatBN7.2
mRatBN7.2	2	107,577,282 - 107,577,441 (+)	MAPPER	mRatBN7.2
mRatBN7.2	17	66,565,013 - 66,565,171 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	70,215,762 - 70,215,919	NCBI	Rnor6.0
Rnor_6.0	2	110,363,966 - 110,364,124	NCBI	Rnor6.0
Rnor_5.0	17	71,918,746 - 71,918,903	UniSTS	Rnor5.0
Rnor_5.0	2	130,081,759 - 130,081,917	UniSTS	Rnor5.0
RGSC_v3.4	2	110,420,185 - 110,420,343	UniSTS	RGSC3.4
RGSC_v3.4	17	77,759,419 - 77,759,576	UniSTS	RGSC3.4
Celera	17	66,070,200 - 66,070,357	UniSTS
Celera	2	102,843,548 - 102,843,706	UniSTS
RH 3.4 Map	17	635.5	UniSTS
Cytogenetic Map	2	q24	UniSTS
Cytogenetic Map	17	q12.3	UniSTS

BE108794

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	66,562,451 - 66,562,611 (+)	MAPPER	mRatBN7.2
mRatBN7.2	2	107,579,316 - 107,579,475 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	110,365,999 - 110,366,157	NCBI	Rnor6.0
Rnor_6.0	17	70,213,200 - 70,213,359	NCBI	Rnor6.0
Rnor_5.0	17	71,916,184 - 71,916,343	UniSTS	Rnor5.0
Rnor_5.0	2	130,083,792 - 130,083,950	UniSTS	Rnor5.0
RGSC_v3.4	2	110,422,217 - 110,422,375	UniSTS	RGSC3.4
RGSC_v3.4	17	77,756,857 - 77,757,016	UniSTS	RGSC3.4
Celera	17	66,067,638 - 66,067,797	UniSTS
Celera	2	102,845,580 - 102,845,738	UniSTS
RH 3.4 Map	17	634.9	UniSTS
Cytogenetic Map	2	q24	UniSTS

AW527741

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	107,507,063 - 107,507,217 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	110,293,820 - 110,293,973	NCBI	Rnor6.0
Rnor_5.0	2	130,012,625 - 130,012,778	UniSTS	Rnor5.0
RGSC_v3.4	2	110,346,181 - 110,346,334	UniSTS	RGSC3.4
Celera	2	102,773,590 - 102,773,743	UniSTS
RH 3.4 Map	2	743.6	UniSTS
Cytogenetic Map	2	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	sensory system	visual system
7	1	18	31	71	28	11	30	36	32	10	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_001062720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000100268 ⟹ ENSRNOP00000090842

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	108,573,985 - 109,565,388 (-)	Ensembl
mRatBN7.2 Ensembl	2	106,645,608 - 107,636,461 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109115 ⟹ ENSRNOP00000085361

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	108,574,076 - 109,920,756 (-)	Ensembl
mRatBN7.2 Ensembl	2	106,645,608 - 107,991,689 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110598 ⟹ ENSRNOP00000083736

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	108,573,985 - 109,334,347 (-)	Ensembl
mRatBN7.2 Ensembl	2	106,645,608 - 107,404,614 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000126861 ⟹ ENSRNOP00000108679

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	108,582,379 - 109,920,756 (-)	Ensembl

RefSeq Acc Id:

XM_008760899 ⟹ XP_008759121

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	108,568,000 - 109,590,789 (-)	NCBI
mRatBN7.2	2	106,639,146 - 107,646,047 (-)	NCBI
Rnor_6.0	2	109,092,931 - 110,424,885 (-)	NCBI

Sequence:

show sequence

CAGGCACGCAAAATAAATATTAAAAAGCACTAAATTCTGATACTCTTTAACTATCATGTTTTAC
TTTTAATATTTAATGCATTTGAAGATAATTTCTAATGGTTGGCCTTCATGTTGCTTATATAGAA
TGCTGATAAAAACAAATATTGCAATAGTTAGCTATCAAATATACAGATTATTTGCAAGCATCAA
TGAGATGTTAAAGGGAGAATCTGAGTCATTTATGTATGACTGTGTAAGCATATACATGTATATA
TAATGTATGTATTGAATTACACATAGATATATGTTGTTTTTCTAATGAGGGCCAAGAGTTAAAG
TACTGAGAATAATGAAGGTGGATATTCACATAAATTCCTATATTTTATGAACAATTTCTTCTCT
CATTTACTAATTATCACTAAGGATAAAGTTCCAATTTATGGCTCATTGTCTTAGTGCTTGTGTT
TTCTTGATGTCTAGCAGTTAGGGACAGGTAACTCAATTTCCTATTATAAATAATGAATATCAGT
AATATATACAAAATAGGACTGGGCCTTTAATACAGAATGACCTAACTCCTTGTTTTTCAACACT
ATTTTCTAGTATACTTAAAGTTTTTGTTGGCCTGGAAATTGCTACAGGGACCATGTGACATCAG
ATTCATTGAGGGTGCATACCACCACACTTACTCAGACTGAAATAATCTATTTAATTCTCCTTGT
TAAATCTCATTTAGTGATAAACAGCTGAAATCCCAGAACTAGGAAGGGTATAGAAACAGCACAA
TTTGTAGCCTAGACTGGGCTACATAGTATGACCACTTCTAATGCAAATGAGCAAAAATAGTAGG
TGGATAAAAATAATAATAAATAAACAAATAACATAGATAAATTTAGACAAGAGTCAGTGGGAAG
GGGTGGGCAAAACCAAAACCAAACAAAAAGAAAAACAGGAGGAAGAAAGAAGAGACAAAAAGGA
GAGAGCAAAAAATGTCCTGTGTTTTATCTTTACTGTATATCATTCATTTAGTAGTGTCACACAT
TATATTAAATCTTCTTATCAATGTCCTGATATTGATATTATTCCATTTTGCATCCTAACTCAGC
TGTAAAAACCAGCTTCTCACAGTGCTCATTCCCTCTACTTGGAAAAATTGAAATTGCATGATTG
ACTTAAATTTTTATTATACAGTTTTAAGAGAAACAGGTTAAGACCACTAAAAAAAGGAAGAAAA
AAAAGGAATTGATCAAAAATATTTGCCTGTGAACTGTGCGGTGCTGGAAATGCAGCCAACACTC
AGGGAAAAAGTTAATATCAAAACTGAAACAAAGCCGTGTTTTGTGAAGCGGTTTAGTAACAGGA
CATTGGAAGAAAGCACATTAGCTCACTTCATAGTAAAACAGGTCCTGCAAGGCCAGGTAACTCA
GGAAGCAGAGTGGTAATTATTCACAGAAGAAAGCCGGTAGTGTACTGTTACAATACTACTGTAG
CAAGTCAGAAGGTCACAAGGCTTCCAGGGTAGCTGACACAACCCGAAACTGCTTGGCCCACTTT
AAAAAAGAAAGAATAAAATGGGAGAGAATGAAGCTGGCTTACCTAACATGGCTTTGCAAGGTAA
AAAGATGGCTTATCATAAAGTCAAGGCAGATCTACGAACCTCAGGACATTCACAGTACTTAGAC
AGTGATGACCTTCAAGCCACTGCCCTTGATTTAGAGTGGGATATGGAGAAGGAACTGGAAGAGC
CAAGCTTTGACCAGTTTCAAACAGATAATGCTGAGCATCAGAACTTGGGACACTCTGAGACTTT
AGACCTCCATCTTGATTCCATTCAACCAGCAACTTCACCCAAAGGAAGATTCCAGAGGCTTCAA
GAAGAGTCTGACTGTGTGACCCACTACACAAGATCTGCACCAAAGAACAACCATTGCAACTTTT
GCTACCTGTTAAAAATACTGTGCATAGCTACAACCCTATTTATTTTTGGAATTATAATAGGTTA
CTATGCACACATGAATTGTCCTTCTGATGCCTCACCATCAGGAACAAATAACCCTCAGTTATAC
CAAGATATTCTCAAGACAATCAAAGCAGAAGATATTAAGAAATCCTTCAGAAATTTGCTACAAG
TCTATGACAGTGAGGATGACATGGAAATTTCAAAGAAGATTAAGAGTCACTGGATTGCATTGGG
CTTGGAAGATACACAGTTCATAAACTATTCAGTGTTGCTGGATTGTCCCGGGCCCTCTCCAGGC
ACCATCACTGTGAGCAGTACTGGCCAGTGCTTTTATCCTGATGGCCAACCTTGCAGGGAAGAAG
CCAGAAGAGGCCAAAGCCAAGATCTGTTCTACTCATATGCAGCCTATTCTGCCAAAGGAACTCT
CCAGGCTGATGTCATCGATGTGAGTTATGGAACTATGGATGACTTAAAACGGATTACAAAGTTG
AAAAATACTACAAATCAAATTGCACTCCTGAAATTAGGAAAATTACCACTACTATATAAGATTT
CCTTACTGGAGAAGGCTGGGTTTGGAGGTGCTCTTCTCTACATTGATCCCTGTGATGCACCAGA
GTCTGCGGTCCTTAGCTCTGAACCTTTTATGGTGACACTGAATCCAGGAGGAGACCCCTCTACA
CCTGGATACCCTAGTCATGATGAAAGCTTTAGACAAAGCCGACCAAACCTCACCTCCCTGTTAG
TGCAGCCCATCTCGGCATCCCTCGCTACAGTGCTCATCTCTTCGCCAAAACTGAGAATGGATAA
AGATGTCTGCCGCCCTCTAGAACTTCCACACAATGAAAAGAGAACTGTCAGTTTGCAGGTACAG
ACAGTCACAAAATTTAAGACAGTGTCTAATGTTGTTGGATATCTAAGAGGTTTGACATCACCAG
ACCGGTATATTATAGTTGGCAGCAACCACCATGCTGGACACAGTTATAATGGACAAGAATGGGC
CAGCAGTACTGCAGTAATCACAGCATTTATTGAAGCTTTGATGTTAAGAGTGAAGAAAGGCTGG
AGACCAGAGCGTACTGTTGTTTTCTGCTCATGGGGAGGAACGCCCTGGGGCAAAATTGGCTCCT
ATGAATGGGGAGAGGATTTTGCGAAGATACTACAGAAAAATGCTGTGGCTTACGTTAGCATCCA
TAGTCCCATCCGGGGCAACTCCACTCTGTATCCAGTAGCATCTCCATCTCTCCAGCAACTGGTT
CTAGAGAAAAATAAGTTCAACTGTGTGCGAAGAGCTCAGTGCCCAGGAGCCAATGTCAGCTCTG
TGCAGATACAAGGTGATGCTGAGTATTTTGTCAACCATCTTGGAGTTCCAACTGTGCAGTTTGC
TTATGAGGACATCAAAGCATTAGAGGGTCCAAGTTTTCTCTCTGAGGCCATTTTTCCTAAACAT
GCAACAAAAATTGAAGAACTGGATCCATCTTTCAACCTTCATGAAGTCATTACTAAGCTCTCAG
GAGAAGTAATTTTACAAATTGCCAATGACCCAGTTCTGCCCTTCAACGCCCTCGATATAGCCTT
AGGAGTTCAAAACAGCCTTAAAGATAATGAGCCTAGTGTCCCTAACCTGCTTGCCTTGGCATCA
AAGCTGAGGGACAGTGCTGAACTCTTCCAATCAGATGAGATGAGACCTGCTAATGACCCAAAGG
AAAGAGTCCCCAGTCGTGTCCGGATGCTGAATGACATCCTTCAAGACCTGGAGAAGAACTTCCT
GGTGCAGCGGGTACCACCGGGTTTCTATAGAAACATCCTGTACCATCTTGATGAGAAGACAAGC
CAGTTTTCCATCCTTAAGGAGGCTTGGGAGCAGTGCATTCCAGAGACATCAAATGAGACTTTGC
AAGAGGCCCTGTCTACTGTGCTGAATAGCATTAATTCCGCTCATACTTTCTTCAAAACAGGACT
GGATGTGTTTGAGAGTGTCTTACTAGAAAAGAACTGAGAAAATCTCAGAATTTTTCAAAGTTTG
TTTACAATTGTATAAGCAAAAGCTCTAATTTGACCAGGTGTTTGTCTTGCTGTATTTGTTGTCA
CTGAAGACTTCCCAGAAATTTAATGCTATTATACAATATATTTTTAAATGTACATAAGAAAGAA
CATTTTGTACTTTTTAAAATATTCTTATAACTCCATTGAACTACATAACAACAATTATTGAAAT
AATACTTAAGATTAATCTATTACAGAGAAATATGCCATATCTTTTAGAAAAACAATGGTTGGGA
GGAGATCAAAATATTTTTGGCATTGTCACTACTGTGGACATAATGTGGAGGAATGCTAGTATTA
TTCTGACAAAACTCCAGGGACTTTGTTCTTATGGAGACATGAAGACCTGATAAGGTTCCAGATA
ATTTTGCAAGTATCTGTTCAATATGAAGACGTGATACATTCTGAATGAGTGATTGATGCCACAA
ACCACTTCGAATGTTTCTCTTTTATACAATAAAGTCTGTCTCCTTAACACAACTAGATGTAATA
ATGCACTGGCTATGAAATTGTATTTTGTAAGTAATAATGAAAAAAGAGCCATAAACATTCCAAG
GGGAAAATTCCCAAGAAACTAGATGGAGCAATTTAAATGCAAATTCTTCCTAAAGAATCAAGTT
TTGAAACCCTTAAATTGCCTCAGTTGATGCTACATGAACTTCAGCAGGGATGTACAACAACAAA
GGAGAGAACATTTTCTACTTCACTTTTTATAGTTTTTGACAGAATTATAGAAACTGGGACTATG
CTAAAGGAGAGCAACACACGTGGCTGGCTCTCCCTACATCTTCCACACAGCCTTTTGCTATAAA
GTGTCTCTAACAGAACCCTATCTAACAATGATGGAAAATGGCAGTTTGCACTCGAAAATCCAAA
ATATCACCAAACACAACTAAATATTGTTTTATACAACATACAAAGTAAACCCTATCATAAAACA
TATGTTTGTTTTAGCAACAAATACTCTTTTAAATTCAGGAAGAAACATTAACATTTTCCCATTT
GTCATCTCTTATACTGGCAAAGCTCAAAACAGAAAATAAGCATGCTACTTATGCTATCAAAAAT
TGGAGTGCTTTAGGGCCTGCTCTCCCATGTTTGCTCATGTAGGAGAGAGATTCTGAATTCTGGC
TCTGTCATCCAGTAGCTCTAGATTCCTTATTCCCTCCAAACTAGAAGATTCTGCCTAGGTGTGG
ACAAGTAAAACTTTTATCTTACCATTTTAGAATATATTTGTTTAAAAATACTTTTCTTGTCTGA
ATAACAGTTTATCTTTGGAAATAGTCCATCAGAATAGTTCTTATAACAGTTCCTATTTCAATCC
TGAAACATTTGGCATTGCCATTGTGTGCCCCTCCATGTTTATCTAAGTCTTTACTTCCTTAAGA
TGAACATACAAGTAAAGTTAGTTAAGAATAAAGCTAAATTTGAGTTAATAATCATTGGCTAAGT
GATAAACAAGAGTTATATCCTCCTACCATTAGTAATGGTTGTTTTCTCAAAGCAGTGAATTGAG
GCAATTAATTATATAATTAAAGAAGAAGCACATGTTTATCTGAAGTGCCTATGTATGAACATTT
TCATATGAGAAATTAAATAACTTGTAATATTTTAATGCATGTATTTAATGTAATGATTTAAATG
AAGTTGCTTGACACTATTCTGTCACATTGCTGAATATGTATGGGAAGGCACTTAGCAGGTTTGG
CACTGCCTATGCAGCACTGCTTCTTCTCCATTATCTGAAGAGGTCAGCAGAACGAAGTTGGTCA
GAATACCCATTCTGCAAGAGAGTTAAATTCTATGTCAAAGGGTGTTTCATACTGAATCAATGGT
TATACAGTTCATAGTGTGGAGTTGAATTTTGTAGATTACCATCTTAGATCAAATCTCTACATTG
TTTTTGTACAACAATTCAAAAAAGCATCGAGAATAGAACATTACCATCTTCTAGGACTTTATAA
GATTAAATACATAGGTAAACTAATTACGTTTGAGACCTTTATTTCTTCCCTCTAAATATATTTC
ATTTATTCACTGAAAACAAGTTAACCCTTGCTTAGCACACTCTATTTGATCATTTAAAAGATCA
TATAAAGTGTTTACATTAGATTTAAATAGATGTTCATGAATCCTGAAGGTGATCCTTCACAGTT
TGAATTTATATAGCTCTGATTCCTTAGAACATTGTATCATATCTCTCTCTGACATGCTTGGCTC
AAATCATTTTCAGGTATATTACATGTTAACTTTTGGTGAACTCTCTAGTAGATATCATCAGGAA
CCAAGTAGTGACACGTGGTGTATGAATCAGTAGTACTTTAAAATACACCAAGTTTGATATCAAG
TTTCAACTTGATAAATCTAGACATCAAGTACCTCTGAAAGTACTTTATATGGAACTCGGCCCAG
GAGGGAGCAAGTATTAGATAATCCATTTCCAAAAAATGTGTGTGTCCAGGCTGGATATCTGGAT
ATATTACTCCTGATCTGAGAAACAAAGGGGAGCCTGTCAGTCAAGACTCAGGCTAAGGATATTG
CTGTTAATCATAAATTCTTTGCTATCCAAATCAGATATGGTACTTGAGCAAGGTGATTGGAAAT
ATGGACATAGGCATGTACTCAGAAAATCTAGGCTAAAGTCACCTAGATTTTCAGATTCTCAGTA
TTCTTGTCCAGTGTGCACTGTCCTCTTTCTGAAAAGATAGAATTACAGATGACCTTTCCAGCAA
ATTAGATGAAGCTAGGCACCTAGTCAGATGCTGTTTTGAGCTGGGAATATGATTTGAATGCAAG
ATAAGCTCATGTTTTGAATATACTTGACAAAATGTTCCCAGAAAATCAGGGCAAAGAACGGAAA
GTTTGAGAAATGACTATAGATGATGCCAGAAGTCAGGAAGAAGGATGCTGAGCAACATATAACA
GAGAGATCTGCTACCTGGAAACATCAACAGTGTTTGCTTGAAATGTAAAATTGGAGGATTCTTC
AGAAAATTTATTTTCAGATTTGATATCATCTAGTTTAGTGATTTTTAATCTACATAAATCCTGT
ATCCTAATAAAACATCCTTTTGAAAATCATTAAAGTAAAAAGAAAGAAAGTCATAGTAATGAAG
GATTCCAAATATTATTCAAAATGCCATTATTAAAACCCCAAAGAAGGGGTTGGAGAGATGGCTC
AGCAGATAGGAACACTTGCAACTCAGTCATGAAAACTTGGAAAACAAAAACAAAAACTTGGAAT
CAGTTTCCTGCAGTCGTCAGGGAGCTCATAAATTCTTGCACTAAGGGATTCAATGACCCAATCT
TATTCTTCAAATACATCACACACCACACACACACATACACACACACACACACTCACTATTAAAA
TAAACCCCCAACAAAATATAGGTAATACAAAAGATGACCTGCTTTATCTATAAAAGAGAGGTAG
GGTGTAGCCAACATTTATGCAAGCTTCAGCAGACACTAGACTAGACATGGTTTACATTTTCCCC
CCTAGTTGACTGTATACACCAACTGATTTAACAAGGAAGAAACCAGGTTTGATGAGACATCTTC
AGACTTTTCAGATCGATAATAATAATAGTAATAATAATAATAATAATAATAATAATAATACATG
TTGTGTTATTTCTTTCTTCTCAGTGGAACCTAGTAATGTCACCATGGGCCTTCTTTACGCCAGG
TGCTCCAGAGAACACACATTTTTCTATTTGAAAATATAATATGATATAACATTTTGAGGTAACT
TTACATATATAGCAAGCCTCAGCTATGTTAACAGCTTTGGCCAGGAGCCACTTCATTTGCAAAA
TACCTAAGAAGTGAAATACATAATCATCAGTGACTGTAGTCCATTTAAAAATGGTATACATGTG
TAAGTTTGAAACATCTAAAATTATGAAAACTAATCACAGATATACTATCAGGACAACAGGTGTA
CACATTGTGAAACCAAGGCAGAATGCACTAATCTCATAATGCCATATGCCAAATGTTTCTACAA
TTTGTTCAGAAAACAATAGGTGCATTGATTTAGGAATAAAGCTATATATTAGACTTTAAACCTC
AACTTCTTAAATAAATGCATAGCATATTAGAATTTTTGTTGGCTAGAAAGATGAGCTATGCTTT
CAAACTCAGAAAAATAAAATATTTGTTACAAGTTCATCTGATCTGAATCAGTATCTTGCCAGAT
TAAAAAAAGAAATTATTTGCAGAATAAATTGATAGATGTAGTCACTAATATTCTCCAGAGACAC
TCTGTCCTATATGTAATTAATTCCTGAAATAATTAGTATCTCTTTGACTGTCATCTCATTGGTT
TAACATGTTAGTGAAGTGTGCCTTGGCCACACATTTTTTTAATGGAAAAGAATTACTTTAAACT
GCCAATACATGTGCTGAGTAGAAGAAAATTGCATATTCCAATACATTACTCTCCAATGTGTTGC
TCTACAGGACTGGGAATTTAGCCTAGGCATGAAAGAATAAGTATTTACTGAGCTATGCTTTCAA
ACTCAGAACCTTGCATGAGTTTAAATTGCTAACCTAAAAATGGCTCATTAGAGTTTGCCATTCT
GAAATCTGAAAGAGCATTGAAATTTTGAAGTACCTTATCAAGTGTGACTACCCTTTAGTTGAGC
AGGATTGTTTTACCAAATTTTGAATTTTGAAGTGATTTAAATGTGAAGAATTGCAAACCATAAT
GTAGCATGTTGCTGGTCGTTACCATGTCCACTCAGAAATATATTTTATTTTCCTTCTGGGTACA
CTTTAGAAATGGTATTGGGCATACCCTTTCTGAAGAAGTGGTTTTTAAGACCCATCTATTCAAC
ATAAATGTGTCTGTTAACCATCTAAAGATTTCATTCCATAATACCTTTAGATATCCTCCAAAGT
TGTGTATCAAAAGTGCCTTTAACATAGAGGCTTTCAAGTATCCAAAACCTGGCTCACTGTGAGT
GACATGTTTCATAAAAGCATTTATTATCTAAAGTTCAAAGCAGATAAGAATTTTAACAGGAAAG
GACAAAACTGAGGCTGATTTGGGACCTCCCATTATAATGTTTCTAGTATTGTGTTTTTGATATT
CTGACTCAAAGATTATGATTAGCAAAATAGTGATATTAAGGTTTTCAGCCAAAATGTACTTAGC
AAAGCCAAAGAAATTTATTTCCAGGATTTAGTCAAGAATTAGATCACATGCAACTGATTGACTT
CCTTCACCCAAGGAATGCATTAACGACTGTGCACAGAGCCTAAGAGTATTTATTTTTGCTCCTT
TCATGGTCTAAGCCAGTAAGCAGTGAGGTAGAGTTAAACATATTTTATTTTCTGGGAGTAATTA
ATACGCAGCAGCTCAGTCACAAAAATACTACACATGTGCCTGCCCTATGCCATTTGTCATGTGC
TCTAGTTTTCTATGCTCAAGAGATTAATATGCAATCAACTTATGAATGATTGAACTGTATTAAA
GTTTATATTGGTCTTTTGTTCTAATTAAAGTGTAGGCTTGGTATCTGTACAGAACTTCACTGAA
GAAATTGAGACAGAGAACTTATTTTAATGGACTACATATATTTTTAATCAAAATGTATAATTAT
TATAACTTTACAGATTCTTCAAGAGACTTAAATTCAATATATGGCAAATGGTTAATAGCTGGGT
TTCACCTTTGTGATTTCTTACCTATGTAATAAAGTATTTTTCAGTATACACAGCAGAATAATAT
TAATATTAGTAATAGTGTTTTCCTTTGTTTTTATAGAGATGTGTGATTGGACATTACTCTGAAA
GTTAGAACATAACCTGACGAATAAGAATGGTTTTCTCTGTTTAGAGAAATCAAATATGTAAACA
AACAAAGTATTTCATTCTACCATTACAACTTCTCTGCAAGAAGCAAAATACCCAAACAGTTAAG
TGTAGCTCACATAATAATATTCCGAGAATGTTATAAATAATTCTATTTAGTAGGAAAGCCCAAC
TCTATTAGGTGATTGAGTGTATACACTGCAAACAAAAGGGCTTGGTGGTAACGTATTCCACATA
TTTTAACTCACTCTTTGAAAAAATCTCATGAAAAGGCTTCCTAGAATACCCTGGTTTGTTTCTA
GAGACACTCATAAAATTGCATGGCTTTTTGATGATACTTTTCTGTGTGGGTTACCAATGTTCAT
ACATACAGGAGTTTAATACTTTTAGCTTTATTTGCTGTGTTTATAATAAAATATTTAAATTAAC
AATTTTGTAAAATTTATTTTTCCAGTACTATAATATCAAAAAACGTAATTGTAGAATTAAAAAT
AAAGTAGATTATGGAAAAGTTTATAGATTCATTGGGGATAATTTTAAAGGGTAACCTCACCAAA
TAAATGTACTTTAATTAAAAACAGTCACCTATCAAAGAGATATGTCCATTAATAAATTGCACTG
CACTATGCTCAATGTTCAAGAAAATATTATCATCTGCGATTGATAAACTATATTGCATAGAGAT
TGCTAAAGTCATTGTGATCCTCCTTGATTTTTAATGACATAAATTTATAGGTAAATGTCTGTAT
TATCCAATTACTACATATGTTCAAAACTGATTGTTTTTGCATGTTCCCTAAGTGTGACTGCAGC
TCAGTGTATAACCATTTTGTGTTACTTCAAATGATTCAATATGAAGCTTTTTGTGTGATTGGGA
GTGATAAAAATGGATAGAGTTATCAAATCTATTAAGAATGAGTGATTGTTTTATACTTTTCCTG
CTTAAATATTTGCACAAAATTGAAAACACAGTACCAGGAATGAAAACACTTTTAATGTAACATG
TTCGGATTTATATTTTTGTTTGTGAGCCTAGCCTTTCCAACCCATGTTTTGATTTGTAAATGGC
TATTTTTAAAGCTAATTTCAAGTGTATTAAATACAGTTGAAAATTGA

hide sequence

RefSeq Acc Id:

XM_039103968 ⟹ XP_038959896

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	108,568,000 - 109,590,790 (-)	NCBI
mRatBN7.2	2	106,639,146 - 107,646,047 (-)	NCBI

RefSeq Acc Id:

XM_039103970 ⟹ XP_038959898

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	108,568,000 - 109,333,467 (-)	NCBI
mRatBN7.2	2	106,639,146 - 107,404,693 (-)	NCBI

RefSeq Acc Id:

XM_039103971 ⟹ XP_038959899

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	108,568,000 - 109,920,650 (-)	NCBI
mRatBN7.2	2	106,639,146 - 107,992,218 (-)	NCBI

RefSeq Acc Id:

XM_039103972 ⟹ XP_038959900

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	108,935,619 - 109,590,791 (-)	NCBI
mRatBN7.2	2	107,003,985 - 107,646,047 (-)	NCBI

RefSeq Acc Id:

XM_063282869 ⟹ XP_063138939

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	108,568,000 - 109,590,789 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_008759121	(Get FASTA)	NCBI Sequence Viewer
	XP_038959896	(Get FASTA)	NCBI Sequence Viewer
	XP_038959898	(Get FASTA)	NCBI Sequence Viewer
	XP_038959899	(Get FASTA)	NCBI Sequence Viewer
	XP_038959900	(Get FASTA)	NCBI Sequence Viewer
	XP_063138939	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000083736
	ENSRNOP00000083736.1
	ENSRNOP00000085361
	ENSRNOP00000085361.2
	ENSRNOP00000090842
	ENSRNOP00000090842.1
	ENSRNOP00000108679.1

RefSeq Acc Id:	XP_008759121 ⟸ XM_008760899
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6ACN8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGENEAGLPNMALQGKKMAYHKVKADLRTSGHSQYLDSDDLQATALDLEWDMEKELEEPSFDQF QTDNAEHQNLGHSETLDLHLDSIQPATSPKGRFQRLQEESDCVTHYTRSAPKNNHCNFCYLLKI LCIATTLFIFGIIIGYYAHMNCPSDASPSGTNNPQLYQDILKTIKAEDIKKSFRNLLQVYDSED DMEISKKIKSHWIALGLEDTQFINYSVLLDCPGPSPGTITVSSTGQCFYPDGQPCREEARRGQS QDLFYSYAAYSAKGTLQADVIDVSYGTMDDLKRITKLKNTTNQIALLKLGKLPLLYKISLLEKA GFGGALLYIDPCDAPESAVLSSEPFMVTLNPGGDPSTPGYPSHDESFRQSRPNLTSLLVQPISA SLATVLISSPKLRMDKDVCRPLELPHNEKRTVSLQVQTVTKFKTVSNVVGYLRGLTSPDRYIIV GSNHHAGHSYNGQEWASSTAVITAFIEALMLRVKKGWRPERTVVFCSWGGTPWGKIGSYEWGED FAKILQKNAVAYVSIHSPIRGNSTLYPVASPSLQQLVLEKNKFNCVRRAQCPGANVSSVQIQGD AEYFVNHLGVPTVQFAYEDIKALEGPSFLSEAIFPKHATKIEELDPSFNLHEVITKLSGEVILQ IANDPVLPFNALDIALGVQNSLKDNEPSVPNLLALASKLRDSAELFQSDEMRPANDPKERVPSR VRMLNDILQDLEKNFLVQRVPPGFYRNILYHLDEKTSQFSILKEAWEQCIPETSNETLQEALST VLNSINSAHTFFKTGLDVFESVLLEKN hide sequence

RefSeq Acc Id:	XP_038959899 ⟸ XM_039103971
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A335 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959896 ⟸ XM_039103968
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038959898 ⟸ XM_039103970
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6G9E6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959900 ⟸ XM_039103972
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSRNOP00000085361 ⟸ ENSRNOT00000109115

Ensembl Acc Id:

ENSRNOP00000083736 ⟸ ENSRNOT00000110598

Ensembl Acc Id:

ENSRNOP00000090842 ⟸ ENSRNOT00000100268

RefSeq Acc Id:	XP_063138939 ⟸ XM_063282869
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6G9E6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000108679 ⟸ ENSRNOT00000126861

Protein Domains

Transferrin receptor-like dimerisation

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1565147	AgrOrtholog
BioCyc Gene	G2FUF-53536	BioCyc
Ensembl Genes	ENSRNOG00000065021	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000100268	ENTREZGENE
	ENSRNOT00000100268.2	UniProtKB/TrEMBL
	ENSRNOT00000109115	ENTREZGENE
	ENSRNOT00000109115.2	UniProtKB/TrEMBL
	ENSRNOT00000110598	ENTREZGENE
	ENSRNOT00000110598.2	UniProtKB/TrEMBL
	ENSRNOT00000126861.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.930.40	UniProtKB/TrEMBL
	3.50.30.30	UniProtKB/TrEMBL
	Zn peptidases	UniProtKB/TrEMBL
InterPro	PA_dom_sf	UniProtKB/TrEMBL
	Peptidase_M28B	UniProtKB/TrEMBL
	TFR-like_dimer_dom	UniProtKB/TrEMBL
	TFR-like_dimer_dom_sf	UniProtKB/TrEMBL
KEGG Report	rno:499583	UniProtKB/TrEMBL
NCBI Gene	499583	ENTREZGENE
PANTHER	INACTIVE N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE-LIKE PROTEIN 2	UniProtKB/TrEMBL
	PTHR10404	UniProtKB/TrEMBL
Pfam	TFR_dimer	UniProtKB/TrEMBL
PhenoGen	Naaladl2	PhenoGen
RatGTEx	ENSRNOG00000065021	RatGTEx
Superfamily-SCOP	PA domain	UniProtKB/TrEMBL
	SSF47672	UniProtKB/TrEMBL
	Zn-dependent exopeptidases	UniProtKB/TrEMBL
UniProt	A0A8I6A335	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ACN8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6G9E6	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LRU1_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-06-02	Naaladl2	N-acetylated alpha-linked acidic dipeptidase-like 2	Naaladl2	N-acetylated alpha-linked acidic dipeptidase-like 2	Data merged from RGD:149736134	737654	PROVISIONAL
2021-08-09	Naaladl2	N-acetylated alpha-linked acidic dipeptidase-like 2			Symbol and Name status set to provisional	45752	PROVISIONAL
2008-03-06	Naaladl2	N-acetylated alpha-linked acidic dipeptidase-like 2	RGD1565147_predicted	similar to N-acetylated alpha-linked acidic dipeptidase 2 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1565147_predicted	similar to N-acetylated alpha-linked acidic dipeptidase 2 (predicted)	LOC499583	similar to N-acetylated alpha-linked acidic dipeptidase 2	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC499583	similar to N-acetylated alpha-linked acidic dipeptidase 2			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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