Ttc21b (tetratricopeptide repeat domain 21B) - Rat Genome Database

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Gene: Ttc21b (tetratricopeptide repeat domain 21B) Rattus norvegicus
Analyze
Symbol: Ttc21b
Name: tetratricopeptide repeat domain 21B
RGD ID: 1565122
Description: Predicted to enable chromatin binding activity. Predicted to be involved in intraciliary retrograde transport; protein localization to cilium; and regulation of intraciliary retrograde transport. Predicted to act upstream of or within several processes, including central nervous system development; regulation of gene expression; and regulation of signal transduction. Predicted to be located in cilium; cytoplasm; and cytoskeleton. Predicted to be part of intraciliary transport particle A. Human ortholog(s) of this gene implicated in asphyxiating thoracic dystrophy 4 and nephronophthisis 12. Orthologous to human TTC21B (tetratricopeptide repeat domain 21B); INTERACTS WITH 3-chloropropane-1,2-diol; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC103690137; LOC295654; RGD1565122; similar to tetratricopeptide repeat domain 21B; tetratricopeptide repeat protein 21B; tetratricopeptide repeat protein 21B-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8371,269,425 - 71,343,936 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl371,269,425 - 71,343,936 (-)EnsemblGRCr8
mRatBN7.2350,861,367 - 50,935,880 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl350,861,367 - 50,935,903 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx354,205,184 - 54,278,510 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0362,788,808 - 62,862,132 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0360,568,809 - 60,642,722 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0352,286,794 - 52,361,060 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl352,286,794 - 52,361,060 (-)Ensemblrn6Rnor6.0
Rnor_5.0358,917,760 - 58,990,221 (-)NCBIRnor_5.0Rnor_5.0rn5
Rnor_5.0357,297,234 - 57,298,391 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4348,147,053 - 48,222,257 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera350,451,676 - 50,523,656 (-)NCBICelera
Cytogenetic Map3q21NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18327258   PMID:19732765   PMID:20889716   PMID:22079090   PMID:22302990   PMID:27482817   PMID:27932497   PMID:28291836   PMID:29615573  


Genomics

Comparative Map Data
Ttc21b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8371,269,425 - 71,343,936 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl371,269,425 - 71,343,936 (-)EnsemblGRCr8
mRatBN7.2350,861,367 - 50,935,880 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl350,861,367 - 50,935,903 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx354,205,184 - 54,278,510 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0362,788,808 - 62,862,132 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0360,568,809 - 60,642,722 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0352,286,794 - 52,361,060 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl352,286,794 - 52,361,060 (-)Ensemblrn6Rnor6.0
Rnor_5.0358,917,760 - 58,990,221 (-)NCBIRnor_5.0Rnor_5.0rn5
Rnor_5.0357,297,234 - 57,298,391 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4348,147,053 - 48,222,257 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera350,451,676 - 50,523,656 (-)NCBICelera
Cytogenetic Map3q21NCBI
TTC21B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382165,873,362 - 165,953,776 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2165,857,475 - 165,953,851 (-)Ensemblhg38GRCh38
GRCh372166,729,872 - 166,810,286 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362166,438,699 - 166,518,594 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342166,556,350 - 166,635,855NCBI
Celera2160,340,419 - 160,420,342 (-)NCBICelera
Cytogenetic Map2q24.3NCBI
HuRef2158,611,801 - 158,691,750 (-)NCBIHuRef
CHM1_12166,736,157 - 166,816,658 (-)NCBICHM1_1
T2T-CHM13v2.02166,330,866 - 166,411,321 (-)NCBIT2T-CHM13v2.0
Ttc21b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39266,014,131 - 66,087,144 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl266,014,671 - 66,086,961 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38266,183,787 - 66,256,674 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl266,184,327 - 66,256,617 (-)Ensemblmm10GRCm38
MGSCv37266,022,386 - 66,094,674 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36265,985,166 - 66,057,456 (-)NCBIMGSCv36mm8
Celera267,863,470 - 67,935,886 (-)NCBICelera
Cytogenetic Map2C1.3NCBI
cM Map239.08NCBI
Ttc21b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554498,241,990 - 8,308,562 (+)Ensembl
ChiLan1.0NW_0049554498,242,327 - 8,306,012 (+)NCBIChiLan1.0ChiLan1.0
TTC21B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21368,510,088 - 68,606,688 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B68,525,065 - 68,621,669 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B53,140,199 - 53,220,535 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B170,618,800 - 170,698,903 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B170,616,444 - 170,699,471 (-)EnsemblpanPan2panpan1.1
TTC21B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13611,009,362 - 11,086,586 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3611,010,296 - 11,086,674 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3611,153,712 - 11,231,392 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03611,143,221 - 11,221,003 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3611,143,232 - 11,220,919 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13611,225,004 - 11,302,809 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03611,197,039 - 11,275,277 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03611,309,967 - 11,387,866 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ttc21b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303128,163,380 - 128,252,674 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646913,365,087 - 13,454,340 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493646913,365,168 - 13,454,340 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TTC21B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1572,430,726 - 72,512,491 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11572,430,250 - 72,512,503 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21580,879,935 - 80,937,009 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TTC21B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11051,365,156 - 51,449,207 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1051,364,889 - 51,449,183 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666040148,071,343 - 148,153,777 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ttc21b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247873,686,088 - 3,744,895 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247873,685,700 - 3,745,018 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Ttc21b
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1543,642,370 - 43,717,223 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ttc21b
1537 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:89
Count of miRNA genes:81
Interacting mature miRNAs:82
Transcripts:ENSRNOT00000007832
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300178Hrtrt4Heart rate QTL 43.74heart pumping trait (VT:2000009)heart rate (CMO:0000002)351490129111359995Rat
634317Bw117Body weight QTL 1173.58abdominal fat pad mass (VT:1000711)abdominal fat pad weight to body weight ratio (CMO:0000095)35986366373704481Rat
1331795Rf30Renal function QTL 303.708urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)35986366387321459Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
1354589Bw31Body weight QTL 313.3body mass (VT:0001259)body weight (CMO:0000012)35365182698651826Rat
2303593Gluco46Glucose level QTL 463blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)34887661993876619Rat
1354590Despr11Despair related QTL 110.000031locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)34887661993876619Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)33540319997383526Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
631832Sach1Saccharin preference QTL 12.70.02consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)34790417292904172Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)349872657138829559Rat
1331777Bw24Body weight QTL 243.503body mass (VT:0001259)body weight (CMO:0000012)35986366387321459Rat
631647Bp122Blood pressure QTL 1226.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)35109256196092561Rat
1300169Bp177Blood pressure QTL 1772.96arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)33642511681425116Rat
9590286Uminl1Urine mineral level QTL 13.50.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)34865774493657744Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)370845569136091483Rat
4889966Bss95Bone structure and strength QTL 954.4tibia area (VT:1000281)tibia-fibula cross-sectional area (CMO:0001718)33779691982796919Rat
2302276Bw82Body weight QTL 824.32body mass (VT:0001259)body weight (CMO:0000012)35986366383358329Rat
2292613Ept16Estrogen-induced pituitary tumorigenesis QTL 168.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat
738019Anxrr10Anxiety related response QTL 103.9exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)358925062103925062Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)370311536115311536Rat
9590136Scort3Serum corticosterone level QTL 323.370.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)34865774493657744Rat
61419Cia11Collagen induced arthritis QTL 115.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)35076614595766145Rat
61356Bp37Blood pressure QTL 373blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)35109256196092561Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)336721849110333156Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)35076614595766145Rat
8694196Abfw2Abdominal fat weight QTL 216.580.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)34865774493657744Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31141509147Rat
1354597Kidm13Kidney mass QTL 132.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)342158111124558371Rat
2325840Bp345Blood pressure QTL 3450.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)33870893183708931Rat
8552950Pigfal12Plasma insulin-like growth factor 1 level QTL 127.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)34865774493657744Rat
631676Cm8Cardiac mass QTL 87.030.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)33736373482363734Rat
2290452Scl56Serum cholesterol level QTL 562.26blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)33610140381101403Rat
8694386Bw159Body weight QTL 1594.520.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)34865774493657744Rat
1354604Bw36Body weight QTL 362.9body mass (VT:0001259)body weight (CMO:0000012)342158111124558371Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35675975141509147Rat
1358186Ept2Estrogen-induced pituitary tumorigenesis QTL 28.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 40 59 6 304 140 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000007832   ⟹   ENSRNOP00000007832
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl371,269,933 - 71,343,936 (-)Ensembl
mRatBN7.2 Ensembl350,861,875 - 50,935,903 (-)Ensembl
Rnor_6.0 Ensembl352,286,794 - 52,361,060 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000077132
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl350,656,125 - 50,658,546 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000118540   ⟹   ENSRNOP00000083967
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl371,269,425 - 71,343,936 (-)Ensembl
mRatBN7.2 Ensembl350,861,367 - 50,935,903 (-)Ensembl
RefSeq Acc Id: NM_001191737   ⟹   NP_001178666
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8371,269,425 - 71,343,936 (-)NCBI
mRatBN7.2350,861,367 - 50,935,880 (-)NCBI
Rnor_6.0352,286,794 - 52,361,060 (-)NCBI
Rnor_5.0357,297,234 - 57,298,391 (+)NCBI
Rnor_5.0358,917,760 - 58,990,221 (-)NCBI
Celera350,451,676 - 50,523,656 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039104488   ⟹   XP_038960416
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8371,269,427 - 71,326,799 (-)NCBI
mRatBN7.2350,861,367 - 50,918,760 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001178666 (Get FASTA)   NCBI Sequence Viewer  
  XP_038960416 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL79030 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000007832.8
  ENSRNOP00000083967
  ENSRNOP00000083967.2
RefSeq Acc Id: NP_001178666   ⟸   NM_001191737
- UniProtKB: D4A333 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000007832   ⟸   ENSRNOT00000007832
RefSeq Acc Id: XP_038960416   ⟸   XM_039104488
- Peptide Label: isoform X1
- UniProtKB: D4A333 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000083967   ⟸   ENSRNOT00000118540
Protein Domains
Tetratricopeptide repeat protein 21A/21B C-terminal   Tetratricopeptide repeat protein 21A/21B fifth ARM   Tetratricopeptide repeat protein 21A/21B fourth ARM   Tetratricopeptide repeat protein 21A/21B N-terminal   Tetratricopeptide repeat protein 21A/21B second ARM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A333-F1-model_v2 AlphaFold D4A333 1-1315 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692108
Promoter ID:EPDNEW_R2631
Type:multiple initiation site
Name:Ttc21b_1
Description:tetratricopeptide repeat domain 21B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0352,361,143 - 52,361,203EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565122 AgrOrtholog
BioCyc Gene G2FUF-49548 BioCyc
Ensembl Genes ENSRNOG00000005868 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000054733 Ensembl
Ensembl Transcript ENSRNOT00000007832.9 UniProtKB/TrEMBL
  ENSRNOT00000118540 ENTREZGENE
  ENSRNOT00000118540.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/TrEMBL
InterPro ARM_TT21_2nd UniProtKB/TrEMBL
  ARM_TT21_4th UniProtKB/TrEMBL
  ARM_TT21_5th UniProtKB/TrEMBL
  ARM_TT21_C UniProtKB/TrEMBL
  ARM_TT21_N UniProtKB/TrEMBL
  TPR-like_helical UniProtKB/TrEMBL
  TPR_repeat UniProtKB/TrEMBL
  TTC21A/TTC21B UniProtKB/TrEMBL
NCBI Gene 295654 ENTREZGENE
PANTHER PTHR14699 UniProtKB/TrEMBL
  TETRATRICOPEPTIDE REPEAT PROTEIN 21B UniProtKB/TrEMBL
Pfam ARM_TT21 UniProtKB/TrEMBL
  ARM_TT21_2nd UniProtKB/TrEMBL
  ARM_TT21_4th UniProtKB/TrEMBL
  ARM_TT21_5th UniProtKB/TrEMBL
  ARM_TT21_C UniProtKB/TrEMBL
  ARM_TT21_N UniProtKB/TrEMBL
  TPR_8 UniProtKB/TrEMBL
PhenoGen Ttc21b PhenoGen
PROSITE TPR UniProtKB/TrEMBL
RatGTEx ENSRNOG00000005868 RatGTEx
  ENSRNOG00000054733 RatGTEx
SMART TPR UniProtKB/TrEMBL
Superfamily-SCOP HCP-like UniProtKB/TrEMBL
  SSF48452 UniProtKB/TrEMBL
UniProt A0A8I6GBB8_RAT UniProtKB/TrEMBL
  D4A333 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Ttc21b  tetratricopeptide repeat domain 21B  LOC103690137  tetratricopeptide repeat protein 21B-like  Data merged from RGD:9071802 737654 PROVISIONAL
2014-08-25 LOC103690137  tetratricopeptide repeat protein 21B-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-03-06 Ttc21b  tetratricopeptide repeat domain 21B  RGD1565122_predicted  similar to tetratricopeptide repeat domain 21B (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1565122_predicted  similar to tetratricopeptide repeat domain 21B (predicted)  LOC295654  similar to tetratricopeptide repeat domain 21B  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC295654  similar to tetratricopeptide repeat domain 21B      Symbol and Name status set to provisional 70820 PROVISIONAL