Tnfrsf19 (TNF receptor superfamily member 19) - Rat Genome Database

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Gene: Tnfrsf19 (TNF receptor superfamily member 19) Rattus norvegicus
Analyze
Symbol: Tnfrsf19
Name: TNF receptor superfamily member 19
RGD ID: 1564996
Description: Predicted to enable signaling receptor activity. Predicted to be involved in positive regulation of JNK cascade and positive regulation of canonical NF-kappaB signal transduction. Predicted to act upstream of or within hair follicle development. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human TNFRSF19 (TNF receptor superfamily member 19); PARTICIPATES IN cytokine mediated signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC290300; RGD1564996; similar to tumor necrosis factor receptor superfamily, member 19; tumor necrosis factor receptor superfamily member 19; tumor necrosis factor receptor superfamily, member 19
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81539,268,305 - 39,334,566 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1539,268,305 - 39,356,438 (-)EnsemblGRCr8
mRatBN7.21535,092,206 - 35,158,472 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1535,092,206 - 35,180,795 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1536,953,743 - 37,020,054 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01538,104,381 - 38,170,694 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01536,552,934 - 36,619,193 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01541,249,820 - 41,316,203 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1541,246,308 - 41,338,284 (-)Ensemblrn6Rnor6.0
Rnor_5.01545,061,675 - 45,127,279 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41540,051,695 - 40,117,968 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1534,791,461 - 34,857,582 (-)NCBICelera
Cytogenetic Map15p12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-methylcholine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
4-vinylcyclohexene dioxide  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (EXP)
8-Br-cAMP  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aflatoxin M1  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
beta-lapachone  (ISO)
beta-naphthoflavone  (ISO)
bilirubin IXalpha  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
butanal  (ISO)
Butylbenzyl phthalate  (ISO)
caffeine  (EXP)
calciol  (ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
capsaicin  (EXP)
carbamazepine  (ISO)
carbon nanotube  (ISO)
carmustine  (ISO)
CGP 52608  (ISO)
chloroprene  (ISO)
choline  (ISO)
cisplatin  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
cyproconazole  (ISO)
cytarabine  (ISO)
diallyl trisulfide  (ISO)
dichloroacetic acid  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
folic acid  (ISO)
FR900359  (ISO)
Garcinol  (ISO)
indole-3-methanol  (EXP)
iron dichloride  (ISO)
L-methionine  (ISO)
lead diacetate  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
melphalan  (ISO)
menadione  (ISO)
mercury dibromide  (ISO)
methapyrilene  (ISO)
methoxyacetic acid  (EXP)
methoxychlor  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (EXP,ISO)
Monobutylphthalate  (EXP)
N,N-diethyl-m-toluamide  (EXP,ISO)
N-nitrosodiethylamine  (ISO)
naproxen  (EXP)
nickel atom  (ISO)
okadaic acid  (ISO)
ozone  (ISO)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
pentanal  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
permethrin  (EXP)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
potassium chromate  (ISO)
progesterone  (ISO)
propanal  (ISO)
propiconazole  (ISO)
propionic acid  (ISO)
quercetin  (ISO)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
serpentine asbestos  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
sumatriptan  (EXP)
sunitinib  (ISO)
temozolomide  (ISO)
titanium dioxide  (ISO)
toluene 2,4-diisocyanate  (ISO)
tributylstannane  (ISO)
trichostatin A  (ISO)
trimellitic anhydride  (ISO)
triptonide  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vincristine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10764796   PMID:18689798   PMID:24129566  


Genomics

Comparative Map Data
Tnfrsf19
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81539,268,305 - 39,334,566 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1539,268,305 - 39,356,438 (-)EnsemblGRCr8
mRatBN7.21535,092,206 - 35,158,472 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1535,092,206 - 35,180,795 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1536,953,743 - 37,020,054 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01538,104,381 - 38,170,694 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01536,552,934 - 36,619,193 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01541,249,820 - 41,316,203 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1541,246,308 - 41,338,284 (-)Ensemblrn6Rnor6.0
Rnor_5.01545,061,675 - 45,127,279 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41540,051,695 - 40,117,968 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1534,791,461 - 34,857,582 (-)NCBICelera
Cytogenetic Map15p12NCBI
TNFRSF19
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381323,570,412 - 23,676,093 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1323,570,370 - 23,676,104 (+)Ensemblhg38GRCh38
GRCh371324,144,551 - 24,250,232 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361323,042,723 - 23,148,232 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341323,042,722 - 23,148,231NCBI
Celera135,207,376 - 5,312,894 (+)NCBICelera
Cytogenetic Map13q12.12NCBI
HuRef134,955,857 - 5,061,345 (+)NCBIHuRef
CHM1_11324,112,757 - 24,218,407 (+)NCBICHM1_1
T2T-CHM13v2.01322,776,896 - 22,882,553 (+)NCBIT2T-CHM13v2.0
Tnfrsf19
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391461,201,283 - 61,284,304 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1461,201,324 - 61,283,939 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381460,963,834 - 61,046,855 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1460,963,875 - 61,046,490 (-)Ensemblmm10GRCm38
MGSCv371461,582,671 - 61,665,692 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361459,918,146 - 60,000,579 (-)NCBIMGSCv36mm8
Celera1458,735,086 - 58,817,672 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1432.06NCBI
Tnfrsf19
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554973,927,604 - 4,024,353 (+)Ensembl
ChiLan1.0NW_0049554973,945,119 - 4,022,478 (+)NCBIChiLan1.0ChiLan1.0
TNFRSF19
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21423,184,686 - 23,290,633 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11314,292,173 - 14,397,932 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0134,880,340 - 4,986,160 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11323,174,613 - 23,280,316 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1323,174,613 - 23,280,316 (+)EnsemblpanPan2panpan1.1
TNFRSF19
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12514,985,893 - 15,075,701 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2514,927,599 - 15,055,449 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2515,062,617 - 15,152,449 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02515,116,246 - 15,206,125 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2515,116,263 - 15,206,145 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12514,997,318 - 15,087,106 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02514,998,952 - 15,088,740 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02515,048,760 - 15,138,606 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tnfrsf19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945117,179,318 - 117,271,131 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366881,790,824 - 1,883,351 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366881,791,350 - 1,883,351 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TNFRSF19
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl112,543,812 - 2,640,736 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1112,469,306 - 2,640,737 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2111,858,979 - 1,955,846 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TNFRSF19
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.133,429,290 - 3,535,841 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl33,429,545 - 3,536,370 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605740,997,195 - 41,103,284 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tnfrsf19
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477614,081,349 - 14,171,281 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462477614,081,607 - 14,171,043 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Tnfrsf19
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11263,390,079 - 63,480,488 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tnfrsf19
243 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:62
Count of miRNA genes:54
Interacting mature miRNAs:57
Transcripts:ENSRNOT00000065261
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15231575947315759Rat
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15139411584Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15144836456Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15231575953331089Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)153185580392671517Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152852773273527732Rat
10755503Bp391Blood pressure QTL 3912.37arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)152272835342072050Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1525285835104695021Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)152233635152597086Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)1525285835104695021Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151915576287086765Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)15278592347785923Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151492659471614418Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)152233635167336351Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)1525285835104695021Rat

Markers in Region
BE102295  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21535,148,158 - 35,148,365 (+)MAPPERmRatBN7.2
Rnor_6.01541,305,927 - 41,306,133NCBIRnor6.0
Rnor_5.01545,117,003 - 45,117,209UniSTSRnor5.0
RGSC_v3.41540,107,518 - 40,107,724UniSTSRGSC3.4
Celera1534,847,198 - 34,847,404UniSTS
RH 3.4 Map15228.8UniSTS
Cytogenetic Map15p12UniSTS
RH138833  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21535,115,031 - 35,115,195 (+)MAPPERmRatBN7.2
Rnor_6.01541,272,643 - 41,272,806NCBIRnor6.0
Rnor_5.01545,084,363 - 45,084,526UniSTSRnor5.0
RGSC_v3.41540,074,774 - 40,074,937UniSTSRGSC3.4
Celera1534,814,376 - 34,814,539UniSTS
RH 3.4 Map15230.6UniSTS
Cytogenetic Map15p12UniSTS
BF420646  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21535,117,003 - 35,117,168 (+)MAPPERmRatBN7.2
Rnor_6.01541,274,615 - 41,274,779NCBIRnor6.0
Rnor_5.01545,086,335 - 45,086,499UniSTSRnor5.0
RGSC_v3.41540,076,746 - 40,076,910UniSTSRGSC3.4
Celera1534,816,348 - 34,816,512UniSTS
RH 3.4 Map15227.1UniSTS
Cytogenetic Map15p12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 11 67 156 91 90 59 27 59 6 277 126 10 135 68 92 31 16 16

Sequence


Ensembl Acc Id: ENSRNOT00000065261   ⟹   ENSRNOP00000063251
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1539,268,305 - 39,356,438 (-)Ensembl
mRatBN7.2 Ensembl1535,092,206 - 35,180,795 (-)Ensembl
Rnor_6.0 Ensembl1541,252,881 - 41,316,203 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000077225   ⟹   ENSRNOP00000071444
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1541,246,308 - 41,338,284 (-)Ensembl
RefSeq Acc Id: NM_001044229   ⟹   NP_001037694
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81539,268,305 - 39,334,566 (-)NCBI
mRatBN7.21535,092,206 - 35,158,472 (-)NCBI
Rnor_6.01541,249,820 - 41,316,203 (-)NCBI
Rnor_5.01545,061,675 - 45,127,279 (-)NCBI
RGSC_v3.41540,051,695 - 40,117,968 (-)RGD
Celera1534,791,461 - 34,857,582 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001037694 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ABE97941 (Get FASTA)   NCBI Sequence Viewer  
  EDL85268 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000063251
  ENSRNOP00000063251.3
RefSeq Acc Id: NP_001037694   ⟸   NM_001044229
- Peptide Label: precursor
- UniProtKB: Q1KMU0 (UniProtKB/TrEMBL),   D3ZUJ0 (UniProtKB/TrEMBL),   A0A9K3Y7S7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000063251   ⟸   ENSRNOT00000065261
Ensembl Acc Id: ENSRNOP00000071444   ⟸   ENSRNOT00000077225
Protein Domains
TNFR-Cys

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZUJ0-F1-model_v2 AlphaFold D3ZUJ0 1-416 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564996 AgrOrtholog
BioCyc Gene G2FUF-13516 BioCyc
Ensembl Genes ENSRNOG00000014265 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000065261 ENTREZGENE
  ENSRNOT00000065261.4 UniProtKB/TrEMBL
Gene3D-CATH Tumor Necrosis Factor Receptor, subunit A, domain 2 UniProtKB/TrEMBL
InterPro TNFR_19 UniProtKB/TrEMBL
  TNFR_Cys_rich_reg UniProtKB/TrEMBL
  TNFRSF19_N UniProtKB/TrEMBL
  TNR19/27/EDAR UniProtKB/TrEMBL
KEGG Report rno:290300 UniProtKB/TrEMBL
NCBI Gene 290300 ENTREZGENE
PANTHER PTHR12120:SF1 UniProtKB/TrEMBL
  TNFR-CYS DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
PhenoGen Tnfrsf19 PhenoGen
PRINTS TNFACTORR19 UniProtKB/TrEMBL
PROSITE TNFR_NGFR_1 UniProtKB/TrEMBL
  TNFR_NGFR_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000014265 RatGTEx
SMART TNFR UniProtKB/TrEMBL
UniProt A0A9K3Y7S7 ENTREZGENE, UniProtKB/TrEMBL
  D3ZUJ0 ENTREZGENE
  Q1KMU0 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary D3ZUJ0 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-07-05 Tnfrsf19  TNF receptor superfamily member 19  Tnfrsf19  tumor necrosis factor receptor superfamily, member 19  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1564996  similar to tumor necrosis factor receptor superfamily, member 19   RGD1564996_predicted  similar to tumor necrosis factor receptor superfamily, member 19 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1564996_predicted  similar to tumor necrosis factor receptor superfamily, member 19 (predicted)  LOC290300  similar to tumor necrosis factor receptor superfamily, member 19  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC290300  similar to tumor necrosis factor receptor superfamily, member 19      Symbol and Name status set to provisional 70820 PROVISIONAL