Idnk (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 17 | 6,489,397 - 6,496,520 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 17 | 6,488,982 - 6,499,822 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 17 | 6,483,575 - 6,490,780 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 17 | 6,483,576 - 6,490,905 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 17 | 6,507,451 - 6,514,170 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 17 | 8,039,252 - 8,045,969 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 17 | 6,503,835 - 6,510,554 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 17 | 6,885,323 - 6,892,603 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 17 | 6,885,221 - 6,892,497 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 17 | 9,087,966 - 9,095,189 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 17 | 12,427,114 - 12,433,831 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 17 | 6,593,328 - 6,600,045 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | p14 | NCBI | | | | |
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IDNK (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 9 | 83,623,006 - 83,644,123 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 83,623,049 - 83,644,137 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 9 | 86,238,058 - 86,259,038 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 85,427,786 - 85,448,858 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 83,467,519 - 83,488,592 | NCBI | | | | | Celera | 9 | 56,808,060 - 56,829,073 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | q21.32 | NCBI | | | | | HuRef | 9 | 56,063,170 - 56,084,247 (+) | NCBI | | HuRef | | | CHM1_1 | 9 | 86,384,731 - 86,405,788 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 95,772,739 - 95,793,849 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Idnk (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 13 | 58,305,076 - 58,315,358 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 58,305,463 - 58,312,507 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 13 | 58,157,649 - 58,164,693 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 58,157,649 - 58,164,693 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 13 | 58,259,010 - 58,266,054 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 58,167,303 - 58,173,569 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 59,220,076 - 59,227,120 (+) | NCBI | | Celera | | | Cytogenetic Map | 13 | B1 | NCBI | | | | | cM Map | 13 | 30.95 | NCBI | | | | |
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Idnk (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955432 | 3,626,490 - 3,647,291 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955432 | 3,626,148 - 3,647,285 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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IDNK (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 11 | 82,782,114 - 82,803,168 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 82,787,847 - 82,809,112 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 41,234,505 - 41,255,883 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 82,560,517 - 82,581,675 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 82,560,712 - 82,581,675 (+) | Ensembl | | | panPan2 | panpan1.1 |
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IDNK (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 1 | 75,822,380 - 75,836,880 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 1 | 75,823,528 - 75,837,169 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 1 | 76,473,060 - 76,486,524 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 76,124,883 - 76,138,149 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 1 | 76,125,376 - 76,138,188 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 1 | 75,938,133 - 75,951,364 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 1 | 75,703,382 - 75,716,639 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 1 | 76,404,270 - 76,417,540 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Idnk (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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IDNK (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 10 | 31,329,716 - 31,340,875 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 10 | 31,329,716 - 31,341,025 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 10 | 35,416,379 - 35,427,730 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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IDNK (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 12 | 94,426,017 - 94,448,050 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 94,426,064 - 94,448,460 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666038 | 82,840,107 - 82,862,113 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Idnk (Heterocephalus glaber - naked mole-rat) |
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Idnk (Rattus rattus - black rat) |
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