Micb (MHC class I polypeptide-related sequence B) - Rat Genome Database

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Gene: Micb (MHC class I polypeptide-related sequence B) Rattus norvegicus
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Symbol: Micb
Name: MHC class I polypeptide-related sequence B
RGD ID: 1564508
Description: Predicted to enable natural killer cell lectin-like receptor binding activity. Predicted to be involved in several processes, including gamma-delta T cell activation; response to heat; and response to retinoic acid. Predicted to be located in plasma membrane and side of membrane. Predicted to be active in external side of plasma membrane and extracellular space. Orthologous to human MICB (MHC class I polypeptide-related sequence B); INTERACTS WITH acrylamide; bisphenol A; glycidol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: MHC class I-like located near the leukocyte receptor complex 2; MHC class I-like located near the LRC, 2; MHC class I-like protein MILL2; MHC I like leukocyte 2; Mill2; Mill2 gene for MHC class I-like located near the LRC, 2, exon 3, partial cds, strain:LEW.1lm1
RGD Orthologs
Human
Mouse
Bonobo
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
NCBI Annotation Information: Note: Genetic polymorphisms result in both protein coding and non-coding alleles of this gene.
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8187,623,826 - 87,641,075 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl187,623,826 - 87,640,872 (+)EnsemblGRCr8
mRatBN7.2178,495,779 - 78,513,030 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl178,495,779 - 78,512,827 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx183,884,920 - 83,902,263 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0192,441,736 - 92,459,267 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0185,640,035 - 85,657,377 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0179,754,587 - 79,772,092 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl179,754,587 - 79,772,092 (+)Ensemblrn6Rnor6.0
Rnor_5.0181,016,678 - 81,033,651 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4178,199,668 - 78,216,687 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera172,962,833 - 72,979,882 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-hydroxypropanoic acid  (ISO)
2-palmitoylglycerol  (ISO)
4,4'-sulfonyldiphenol  (ISO)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
8-Br-cAMP  (ISO)
acrylamide  (EXP,ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
avobenzone  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
choline  (ISO)
cisplatin  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
diarsenic trioxide  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
erlotinib hydrochloride  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
fulvestrant  (ISO)
gefitinib  (ISO)
glycidol  (EXP)
ketoconazole  (ISO)
L-methionine  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
nickel atom  (ISO)
okadaic acid  (ISO)
paclitaxel  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
pentanal  (ISO)
propanal  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium dodecyl sulfate  (ISO)
temozolomide  (ISO)
thapsigargin  (ISO)
thiram  (ISO)
triadimefon  (ISO)
tributylstannane  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (ISO)
triphenyl phosphate  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9497295   PMID:11239445   PMID:11287116   PMID:11491531   PMID:12569559   PMID:12782710   PMID:15162429  


Genomics

Comparative Map Data
Micb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8187,623,826 - 87,641,075 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl187,623,826 - 87,640,872 (+)EnsemblGRCr8
mRatBN7.2178,495,779 - 78,513,030 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl178,495,779 - 78,512,827 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx183,884,920 - 83,902,263 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0192,441,736 - 92,459,267 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0185,640,035 - 85,657,377 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0179,754,587 - 79,772,092 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl179,754,587 - 79,772,092 (+)Ensemblrn6Rnor6.0
Rnor_5.0181,016,678 - 81,033,651 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4178,199,668 - 78,216,687 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera172,962,833 - 72,979,882 (+)NCBICelera
Cytogenetic Map1q21NCBI
MICB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38631,494,918 - 31,511,124 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl631,494,881 - 31,511,124 (+)Ensemblhg38GRCh38
GRCh37631,462,695 - 31,478,901 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36631,573,945 - 31,586,880 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34631,573,944 - 31,586,879NCBI
Celera633,071,633 - 33,077,144 (+)NCBICelera
Cytogenetic Map6p21.33NCBI
HuRef631,252,690 - 31,265,723 (+)NCBIHuRef
CHM1_1631,468,019 - 31,481,042 (+)NCBICHM1_1
T2T-CHM13v2.0631,345,743 - 31,364,224 (+)NCBIT2T-CHM13v2.0
Mill2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39718,573,878 - 18,603,621 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl718,573,891 - 18,599,327 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38718,839,958 - 18,869,696 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl718,839,966 - 18,865,402 (+)Ensemblmm10GRCm38
MGSCv37719,425,315 - 19,444,002 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36717,998,488 - 18,021,211 (+)NCBIMGSCv36mm8
Celera716,239,887 - 16,258,480 (+)NCBICelera
Cytogenetic Map7A3NCBI
cM Map79.35NCBI
MICB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2545,966,186 - 45,983,414 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1641,929,429 - 41,944,967 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0631,151,935 - 31,167,567 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1632,042,011 - 32,057,761 (+)NCBIPanPan1.1PanPan1.1panPan2
LOC103221769
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11740,518,365 - 40,532,637 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604431,347,368 - 31,422,297 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Micb
118 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)151940904101229020Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)139728272132889942Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)14630261591302615Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)14630261591302615Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)14350995288509952Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183019780128019780Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)166404680111404680Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)14630261591302615Rat
631512Scl6Serum cholesterol level QTL 69.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)18126986099645535Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)166009857160501508Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)14630261591302615Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)166400974132889942Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)184107164115183752Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16540563796805205Rat
4889962Bss94Bone structure and strength QTL 943.8tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15190920691302615Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)186622262131622262Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)158769992103769992Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)14630261591302615Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)166077886111077886Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)14350995288509952Rat
152025249Scl82Serum cholesterol level QTL 824.77blood cholesterol amount (VT:0000180)152891222109116986Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)186993904131993904Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)187558587132558587Rat
4889919Bss86Bone structure and strength QTL 864.1tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)14630261591302615Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)14350995288509952Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
15 11 67 160 90 89 58 41 58 6 298 140 9 139 77 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001017468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001429963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_190833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB113963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB114035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC093995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC110846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM042093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000083211   ⟹   ENSRNOP00000074366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl187,623,826 - 87,640,872 (+)Ensembl
mRatBN7.2 Ensembl178,495,779 - 78,512,827 (+)Ensembl
Rnor_6.0 Ensembl179,754,587 - 79,772,092 (+)Ensembl
RefSeq Acc Id: NM_001017468   ⟹   NP_001017468
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8187,623,826 - 87,641,075 (+)NCBI
mRatBN7.2178,495,779 - 78,513,030 (+)NCBI
Rnor_6.0179,754,587 - 79,772,092 (+)NCBI
Rnor_5.0181,016,678 - 81,033,651 (+)NCBI
RGSC_v3.4178,199,668 - 78,216,687 (+)RGD
Celera172,962,833 - 72,979,882 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001017468 (Get FASTA)   NCBI Sequence Viewer  
  NP_001416892 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein A0A0G2K7V7 (Get FASTA)   NCBI Sequence Viewer  
  BAD54799 (Get FASTA)   NCBI Sequence Viewer  
  BAD54800 (Get FASTA)   NCBI Sequence Viewer  
  BAD54801 (Get FASTA)   NCBI Sequence Viewer  
  BAD54802 (Get FASTA)   NCBI Sequence Viewer  
  BAD54803 (Get FASTA)   NCBI Sequence Viewer  
  BAD54804 (Get FASTA)   NCBI Sequence Viewer  
  BAD54805 (Get FASTA)   NCBI Sequence Viewer  
  BAD54806 (Get FASTA)   NCBI Sequence Viewer  
  BAD54807 (Get FASTA)   NCBI Sequence Viewer  
  BAD54808 (Get FASTA)   NCBI Sequence Viewer  
  BAD54809 (Get FASTA)   NCBI Sequence Viewer  
  BAD54810 (Get FASTA)   NCBI Sequence Viewer  
  BAD54811 (Get FASTA)   NCBI Sequence Viewer  
  BAD54812 (Get FASTA)   NCBI Sequence Viewer  
  BAD54813 (Get FASTA)   NCBI Sequence Viewer  
  BAD54814 (Get FASTA)   NCBI Sequence Viewer  
  BAD54815 (Get FASTA)   NCBI Sequence Viewer  
  BAD54816 (Get FASTA)   NCBI Sequence Viewer  
  BAD54817 (Get FASTA)   NCBI Sequence Viewer  
  BAD54818 (Get FASTA)   NCBI Sequence Viewer  
  BAD54819 (Get FASTA)   NCBI Sequence Viewer  
  BAD54820 (Get FASTA)   NCBI Sequence Viewer  
  BAD54821 (Get FASTA)   NCBI Sequence Viewer  
  BAD54822 (Get FASTA)   NCBI Sequence Viewer  
  BAD54823 (Get FASTA)   NCBI Sequence Viewer  
  EDM08254 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000074366
RefSeq Acc Id: NP_001017468   ⟸   NM_001017468
- Peptide Label: precursor
- UniProtKB: Q60I19 (UniProtKB/Swiss-Prot),   A0A0G2K7V7 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000074366   ⟸   ENSRNOT00000083211
Protein Domains
Ig-like   Ig-like C1-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K7V7-F1-model_v2 AlphaFold A0A0G2K7V7 1-372 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13689750
Promoter ID:EPDNEW_R274
Type:single initiation site
Name:Micb_1
Description:MHC class I polypeptide-related sequence B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0179,754,588 - 79,754,648EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564508 AgrOrtholog
BioCyc Gene G2FUF-60552 BioCyc
Ensembl Genes ENSRNOG00000057645 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000083211 ENTREZGENE
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
  3.30.500.10 UniProtKB/Swiss-Prot
InterPro Ig-like_dom UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_C1-set UniProtKB/Swiss-Prot
  MHC_class-I_related UniProtKB/Swiss-Prot
  MHC_I-like_Ag-recog UniProtKB/Swiss-Prot
  MHC_I-like_Ag-recog_sf UniProtKB/Swiss-Prot
  MHC_I/II-like_Ag-recog UniProtKB/Swiss-Prot
KEGG Report rno:365212 UniProtKB/Swiss-Prot
NCBI Gene 365212 ENTREZGENE
PANTHER MHC CLASS I-LIKE PROTEIN MILL2 UniProtKB/Swiss-Prot
  MHC CLASS I-RELATED UniProtKB/Swiss-Prot
Pfam C1-set UniProtKB/Swiss-Prot
  MHC_I UniProtKB/Swiss-Prot
PhenoGen Micb PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000057645 RatGTEx
SMART IGc1 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot
  SSF54452 UniProtKB/Swiss-Prot
UniProt A0A0G2K7V7 ENTREZGENE
  A0A8L2R8P8_RAT UniProtKB/TrEMBL
  MILL2_RAT UniProtKB/Swiss-Prot
  Q60I19 ENTREZGENE
UniProt Secondary Q60I19 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-02-18 Micb  MHC class I polypeptide-related sequence B  Mill2  MHC I like leukocyte 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-04-23 Mill2  MHC I like leukocyte 2  Mill2  Mill2 gene for MHC class I-like located near the LRC, 2, exon 3, partial cds, strain:LEW.1lm1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-02-09 Mill2  Mill2 gene for MHC class I-like located near the LRC, 2, exon 3, partial cds, strain:LEW.1lm1      Symbol and Name status set to provisional 70820 PROVISIONAL