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Gene: Nckap5 (NCK-associated protein 5) Rattus norvegicus

Analyze

Symbol:

Nckap5

Name:

NCK-associated protein 5

RGD ID:

1564507

Description:

Predicted to be involved in microtubule bundle formation and microtubule depolymerization. Predicted to be active in microtubule plus-end. Used to study proteinuria. Orthologous to human NCKAP5 (NCK associated protein 5); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; atrazine.

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC363974; Nap5; RGD1564507; similar to Nck-associated protein 5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NCKAP5 (NCK associated protein 5)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Nckap5 (NCK-associated protein 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nckap5 (NCK associated protein 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NCKAP5 (NCK associated protein 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NCKAP5 (NCK associated protein 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nckap5 (NCK associated protein 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NCKAP5 (NCK associated protein 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NCKAP5 (NCK associated protein 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nckap5 (NCK associated protein 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Nckap5 (NCK associated protein 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Nckap5 (NCK-associated protein 5)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Nckap5 (NCK-associated protein 5)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	NCKAP5 (NCK associated protein 5)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	NCKAP5 (NCK associated protein 5)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG42663	Alliance	DIOPT (Ensembl Compara\|OrthoInspector)

Allele / Splice:

Nckap5^em1Mcwi ; Nckap5^em3Mcwi ; Nckap5^em2Mcwi ; Nckap5^em4Mcwi

Genetic Models:

SS-Nckap5^em2Mcwi ; SS-Nckap5^em1Mcwi ; SS-Nckap5^em3Mcwi ; SS-Nckap5^em3Mcwi-/- ; SS-Nckap5^em1Mcwi-/- ; SS-Nckap5^em2Mcwi-/- ; SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5^em4Mcwi

Candidate Gene For:

Bp401

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	39,922,576 - 40,835,849 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	39,922,737 - 40,835,521 (-)	Ensembl				GRCr8
mRatBN7.2	13	37,369,948 - 38,283,257 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	37,370,792 - 38,283,268 (-)	Ensembl				mRatBN7.2
Rnor_6.0	13	42,265,875 - 43,049,232 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	42,265,806 - 42,885,440 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	47,369,687 - 48,273,649 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	38,444,115 - 39,275,959 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	37,164,941 - 37,726,609 (-)	NCBI		Celera
Cytogenetic Map	13	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amenorrhea (ISO)

proteinuria (IAGP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-palmitoylglycerol (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

aldehydo-D-glucose (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[b]fluoranthene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chromium(6+) (ISO)

D-glucose (ISO)

dichloroacetic acid (ISO)

dioxygen (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

folic acid (ISO)

fulvestrant (ISO)

gentamycin (EXP)

glucose (ISO)

glyphosate (EXP)

methapyrilene (ISO)

methoxychlor (EXP)

N-Nitrosopyrrolidine (ISO)

naphthalene (ISO)

nickel atom (ISO)

O-methyleugenol (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

paraquat (EXP)

permethrin (ISO)

pirinixic acid (ISO)

rotenone (EXP)

silicon dioxide (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

testosterone (ISO)

tetrachloromethane (EXP)

titanium dioxide (ISO)

trichostatin A (ISO)

trimellitic anhydride (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

microtubule bundle formation (IBA)

microtubule depolymerization (IBA)

Cellular Component

microtubule plus-end (IBA)

Molecular Function

protein binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

salt-sensitive hypertension (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Narrowing a region on rat chromosome 13 that protects against hypertension in Dahl SS-13BN congenic strains.	Moreno C, etal., Am J Physiol Heart Circ Physiol. 2011 Apr;300(4):H1530-5. doi: 10.1152/ajpheart.01026.2010. Epub 2011 Jan 21.
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Comprehensive gene review and curation	RGD comprehensive gene curation

Genomics

Comparative Map Data

Nckap5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	39,922,576 - 40,835,849 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	39,922,737 - 40,835,521 (-)	Ensembl				GRCr8
mRatBN7.2	13	37,369,948 - 38,283,257 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	37,370,792 - 38,283,268 (-)	Ensembl				mRatBN7.2
Rnor_6.0	13	42,265,875 - 43,049,232 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	42,265,806 - 42,885,440 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	47,369,687 - 48,273,649 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	38,444,115 - 39,275,959 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	37,164,941 - 37,726,609 (-)	NCBI		Celera
Cytogenetic Map	13	q12	NCBI

NCKAP5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	132,671,788 - 133,674,836 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	132,671,788 - 133,568,463 (-)	Ensembl			hg38	GRCh38
GRCh37	2	133,429,361 - 134,326,034 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	133,145,842 - 134,042,501 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	2	127,144,620 - 128,041,268 (-)	NCBI		Celera
Cytogenetic Map	2	q21.2	NCBI
HuRef	2	125,422,804 - 126,319,705 (-)	NCBI		HuRef
CHM1_1	2	133,434,613 - 134,331,480 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	133,110,139 - 134,114,523 (-)	NCBI		T2T-CHM13v2.0

Nckap5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	125,841,373 - 126,758,529 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	125,841,357 - 126,758,536 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	125,913,636 - 126,830,796 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	125,913,620 - 126,830,799 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	127,810,213 - 128,727,209 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	127,741,182 - 128,320,473 (-)	NCBI		MGSCv36	mm8
Celera	1	128,572,707 - 129,481,953 (-)	NCBI		Celera
Cytogenetic Map	1	E3	NCBI
cM Map	1	54.7	NCBI

Nckap5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955440	267,717 - 1,023,489 (-)	Ensembl
ChiLan1.0	NW_004955440	266,389 - 1,159,224 (-)	NCBI	ChiLan1.0	ChiLan1.0

NCKAP5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	41,238,079 - 42,239,451 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	41,253,057 - 42,254,421 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	26,201,986 - 27,200,699 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	136,770,382 - 137,622,004 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	136,771,529 - 137,621,963 (-)	Ensembl			panPan2	panpan1.1

NCKAP5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	19	35,631,900 - 36,588,124 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	19	35,632,939 - 36,449,082 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	19	35,861,560 - 36,822,017 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	19	37,066,848 - 38,035,511 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	19	37,066,864 - 37,944,664 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	19	35,715,146 - 36,677,068 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	19	35,875,120 - 36,840,359 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	19	37,094,072 - 38,067,908 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Nckap5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	84,498,611 - 85,418,181 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936469	56,199,522 - 57,025,906 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936469	56,199,988 - 56,762,974 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NCKAP5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	18,801,095 - 19,521,418 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	18,411,093 - 19,462,362 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	21,366,174 - 21,626,286 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NCKAP5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	16,942,009 - 18,232,033 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	16,942,071 - 17,684,017 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666061	4,586,378 - 5,609,346 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nckap5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624732	32,072,125 - 32,730,105 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624732	32,075,335 - 32,992,428 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Nckap5
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	10	9,771,727 - 10,327,594 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Nckap5
8722 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	204
Count of miRNA genes:	91
Interacting mature miRNAs:	99
Transcripts:	ENSRNOT00000038020, ENSRNOT00000071910, ENSRNOT00000075690
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10755495	Bp387	Blood pressure QTL 387	3.78		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37216241	90057603	Rat
9589141	Insul28	Insulin level QTL 28	10.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	13	11866254	56866254	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	38975045	103588154	Rat
70220	Bp55	Blood pressure QTL 55	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
61453	Pur1	Proteinuria QTL 1	18.06		urine total protein amount (VT:0000032)	urine protein level (CMO:0000591)	13	37087983	39968353	Rat
61391	Bp5	Blood pressure QTL 5	5.6		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	24853925	69853925	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	39968211	83286298	Rat
1300163	Cardf1	Cardiac cell morphology QTL 1	4.18		aorta morphology trait (VT:0000272)	artery lesion measurement (CMO:0000975)	13	12448421	47969993	Rat
2317040	Aia21	Adjuvant induced arthritis QTL 21	2.75		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	12384320	57384320	Rat
631645	Bp121	Blood pressure QTL 121	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	17468282	62468282	Rat
2303030	Bp327	Blood pressure QTL 327			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	1	43736554	Rat
2317046	Aia8	Adjuvant induced arthritis QTL 8	3.9700000286102295		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	12384320	57384320	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	7421791	87286911	Rat
61339	Bp24	Blood pressure QTL 24		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	6002008	47359539	Rat
1331784	Bp222	Blood pressure QTL 222	2.944		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	24335432	55601132	Rat
61340	Bp25	Blood pressure QTL 25	4.2	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37087983	82087983	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
2302275	Gluco37	Glucose level QTL 37	3.8		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	13	12448421	48744906	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	21120177	109350286	Rat
1558644	Cm45	Cardiac mass QTL 45	3.6	0.002	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	13	26244808	71244808	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	33794096	78794096	Rat
61349	Bp31	Blood pressure QTL 31	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
2303563	Bw89	Body weight QTL 89	6		body mass (VT:0001259)	body weight (CMO:0000012)	13	34834947	79834947	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	11081740	103588154	Rat
2301962	Cm72	Cardiac mass QTL 72	4.12		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	13	33794096	60914504	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
12879471	Bp398	Blood pressure QTL 398			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	3088755	48088755	Rat
12879477	Bp401	Blood pressure QTL 401			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	39814726	84814726	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	39968211	84968211	Rat
6893338	Cm76	Cardiac mass QTL 76	0	0.99	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	13	26244808	71244808	Rat
11530006	Niddm72	Non-insulin dependent diabetes mellitus QTL 72		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	38286298	83286298	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	103588154	Rat
9589164	Gluco66	Glucose level QTL 66	6.67	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	13	17711336	62711336	Rat
7411662	Foco29	Food consumption QTL 29	20.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	13	11866254	56866254	Rat

Markers in Region

D13Mgh4

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	39,968,211 - 39,968,353 (+)	Marker Load Pipeline
mRatBN7.2	13	37,415,584 - 37,415,726 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,310,744 - 42,310,885	NCBI	Rnor6.0
Rnor_5.0	13	47,416,073 - 47,416,214	UniSTS	Rnor5.0
RGSC_v3.4	13	38,489,801 - 38,489,943	RGD	RGSC3.4
RGSC_v3.4	13	38,489,802 - 38,489,943	UniSTS	RGSC3.4
Celera	13	37,210,510 - 37,210,651	UniSTS
RGSC_v3.1	13	38,503,844 - 38,503,986	RGD
RH 2.0 Map	13	248.6	RGD
SHRSP x BN Map	13	7.9399	RGD
FHH x ACI Map	13	9.21	RGD
Cytogenetic Map	13	q11	UniSTS

D13Rat38

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	40,211,273 - 40,211,400 (+)	Marker Load Pipeline
mRatBN7.2	13	37,658,659 - 37,658,786 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,552,414 - 42,552,540	NCBI	Rnor6.0
Rnor_5.0	13	47,657,736 - 47,657,862	UniSTS	Rnor5.0
RGSC_v3.4	13	38,741,256 - 38,741,500	RGD	RGSC3.4
RGSC_v3.4	13	38,741,276 - 38,741,402	UniSTS	RGSC3.4
Celera	13	37,446,859 - 37,447,001	UniSTS
RGSC_v3.1	13	38,755,299 - 38,755,543	RGD
RH 2.0 Map	13	224.5	RGD
FHH x ACI Map	13	9.21	RGD
Cytogenetic Map	13	q11	UniSTS

D13Rat80

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	40,569,174 - 40,569,433 (+)	Marker Load Pipeline
mRatBN7.2	13	38,016,571 - 38,016,830 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,907,543 - 42,907,801	NCBI	Rnor6.0
Rnor_5.0	13	48,011,004 - 48,011,262	UniSTS	Rnor5.0
RGSC_v3.4	13	39,111,048 - 39,111,307	RGD	RGSC3.4
RGSC_v3.4	13	39,111,049 - 39,111,307	UniSTS	RGSC3.4
Celera	13	38,683,274 - 38,683,533	UniSTS
RGSC_v3.1	13	39,125,091 - 39,125,350	RGD
SHRSP x BN Map	13	8.0099	RGD
SHRSP x BN Map	13	8.0099	UniSTS
FHH x ACI Map	13	9.21	RGD
Cytogenetic Map	13	q11	UniSTS

D13Arb5

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,902,608 - 37,902,821 (-)	MAPPER	mRatBN7.2
mRatBN7.2	13	37,902,608 - 37,902,821 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	43,785,727 - 43,785,939	NCBI	Rnor6.0
Rnor_6.0	13	42,794,724 - 42,794,936	NCBI	Rnor6.0
Rnor_5.0	13	48,881,057 - 48,881,269	UniSTS	Rnor5.0
Rnor_5.0	13	47,898,759 - 47,898,971	UniSTS	Rnor5.0
RGSC_v3.4	13	38,985,717 - 38,985,930	RGD	RGSC3.4
RGSC_v3.4	13	38,985,718 - 38,985,930	UniSTS	RGSC3.4
Celera	13	37,690,125 - 37,690,337	UniSTS
RGSC_v3.1	13	38,999,761 - 38,999,973	RGD
RH 3.4 Map	13	75.6	UniSTS
RH 3.4 Map	13	75.6	RGD
SHRSP x BN Map	13	7.9399	RGD
SHRSP x BN Map	13	7.9399	UniSTS
FHH x ACI Map	13	8.9999	RGD
Cytogenetic Map	13	q11	UniSTS

D13Arb6

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	40,675,952 - 40,676,129 (+)	Marker Load Pipeline
Rnor_6.0	13	43,013,004 - 43,013,161	NCBI	Rnor6.0
Rnor_5.0	13	48,115,263 - 48,115,420	UniSTS	Rnor5.0
RGSC_v3.4	13	39,222,634 - 39,222,811	RGD	RGSC3.4
RGSC_v3.4	13	39,222,635 - 39,222,811	UniSTS	RGSC3.4
Celera	13	38,756,917 - 38,757,093	UniSTS
RGSC_v3.1	13	39,236,677 - 39,236,854	RGD
FHH x ACI Map	13	9.35	UniSTS
FHH x ACI Map	13	9.35	RGD
Cytogenetic Map	13	q11	UniSTS

D13Got6

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,386,362 - 37,386,542 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,281,442 - 42,281,621	NCBI	Rnor6.0
Rnor_5.0	13	47,386,650 - 47,386,829	UniSTS	Rnor5.0
RGSC_v3.4	13	38,459,370 - 38,459,550	RGD	RGSC3.4
RGSC_v3.4	13	38,459,371 - 38,459,550	UniSTS	RGSC3.4
RGSC_v3.1	13	38,473,413 - 38,473,593	RGD
RH 2.0 Map	13	219.3	RGD
Cytogenetic Map	13	q11	UniSTS

D13Got12

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	13	42,944,498 - 42,944,692	NCBI	Rnor6.0
Rnor_5.0	13	48,046,593 - 48,046,787	UniSTS	Rnor5.0
RGSC_v3.4	13	39,147,206 - 39,147,505	RGD	RGSC3.4
RGSC_v3.4	13	39,147,207 - 39,147,505	UniSTS	RGSC3.4
Celera	13	38,648,875 - 38,649,173	UniSTS
RGSC_v3.1	13	39,161,249 - 39,161,548	RGD
RH 2.0 Map	13	229.1	RGD
Cytogenetic Map	13	q11	UniSTS

D13Got9

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,902,606 - 37,902,855 (+)	MAPPER	mRatBN7.2
mRatBN7.2	13	37,902,606 - 37,902,855 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	43,785,693 - 43,785,941	NCBI	Rnor6.0
Rnor_6.0	13	42,794,722 - 42,794,970	NCBI	Rnor6.0
Rnor_5.0	13	47,898,757 - 47,899,005	UniSTS	Rnor5.0
Rnor_5.0	13	48,881,023 - 48,881,271	UniSTS	Rnor5.0
RGSC_v3.4	13	38,985,716 - 38,985,964	UniSTS	RGSC3.4
RGSC_v3.4	13	38,985,715 - 38,985,964	RGD	RGSC3.4
Celera	13	37,690,123 - 37,690,371	UniSTS
RGSC_v3.1	13	38,999,759 - 39,000,007	RGD
RH 3.4 Map	13	74.3	UniSTS
RH 3.4 Map	13	74.3	RGD
RH 2.0 Map	13	230.1	RGD
Cytogenetic Map	13	q11	UniSTS

D13Got10

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,877,282 - 37,877,427 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,770,243 - 42,770,387	NCBI	Rnor6.0
Rnor_5.0	13	47,874,507 - 47,874,651	UniSTS	Rnor5.0
RGSC_v3.4	13	38,961,078 - 38,961,223	RGD	RGSC3.4
RGSC_v3.4	13	38,961,079 - 38,961,223	UniSTS	RGSC3.4
Celera	13	37,665,923 - 37,666,067	UniSTS
RGSC_v3.1	13	38,975,121 - 38,975,266	RGD
RH 2.0 Map	13	231.6	RGD
Cytogenetic Map	13	q11	UniSTS

D13Uwm6

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	40,523,194 - 40,523,436 (+)	Marker Load Pipeline
mRatBN7.2	13	37,970,583 - 37,970,825 (-)	MAPPER	mRatBN7.2
mRatBN7.2	13	37,970,583 - 37,970,825 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,861,715 - 42,861,956	NCBI	Rnor6.0
Rnor_6.0	13	43,717,605 - 43,717,846	NCBI	Rnor6.0
Rnor_5.0	13	48,813,685 - 48,813,926	UniSTS	Rnor5.0
Rnor_5.0	13	47,965,750 - 47,965,991	UniSTS	Rnor5.0
RGSC_v3.4	13	39,055,043 - 39,055,284	UniSTS	RGSC3.4
Celera	13	38,728,176 - 38,728,417	UniSTS
RGSC_v3.1	13	39,069,085 - 39,069,327	RGD
Cytogenetic Map	13	q11	UniSTS

D13Hmgc60

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,954,050 - 37,954,174 (+)	MAPPER	mRatBN7.2
mRatBN7.2	13	37,954,050 - 37,954,174 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,846,517 - 42,846,640	NCBI	Rnor6.0
Rnor_6.0	13	43,734,239 - 43,734,362	NCBI	Rnor6.0
Rnor_5.0	13	48,829,963 - 48,830,086	UniSTS	Rnor5.0
Rnor_5.0	13	47,950,552 - 47,950,675	UniSTS	Rnor5.0
RGSC_v3.4	13	39,038,836 - 39,038,959	UniSTS	RGSC3.4
Celera	13	38,744,628 - 38,744,751	UniSTS
Cytogenetic Map	13	q11	UniSTS

D13Hmgc72

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,585,892 - 37,586,087 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,479,728 - 42,479,922	NCBI	Rnor6.0
Rnor_5.0	13	47,585,011 - 47,585,205	UniSTS	Rnor5.0
Celera	13	37,374,275 - 37,374,494	UniSTS
Cytogenetic Map	13	q11	UniSTS

D13Hmgc93

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,406,467 - 37,406,640 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,301,732 - 42,301,904	NCBI	Rnor6.0
Rnor_5.0	13	47,407,061 - 47,407,233	UniSTS	Rnor5.0
Celera	13	37,201,381 - 37,201,545	UniSTS
Cytogenetic Map	13	q11	UniSTS

AU050004

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,550,806 - 37,550,920 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,444,642 - 42,444,755	NCBI	Rnor6.0
Rnor_5.0	13	47,549,925 - 47,550,038	UniSTS	Rnor5.0
RGSC_v3.4	13	38,633,034 - 38,633,147	UniSTS	RGSC3.4
Celera	13	37,339,214 - 37,339,327	UniSTS
Cytogenetic Map	13	q11	UniSTS

AU048264

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,383,669 - 37,383,805 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,278,749 - 42,278,884	NCBI	Rnor6.0
Rnor_5.0	13	47,383,957 - 47,384,092	UniSTS	Rnor5.0
RGSC_v3.4	13	38,456,678 - 38,456,813	UniSTS	RGSC3.4
Celera	13	37,178,641 - 37,178,776	UniSTS
Cytogenetic Map	13	q11	UniSTS

AU048115

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	40,328,178 - 40,328,341 (+)	Marker Load Pipeline
mRatBN7.2	13	37,775,559 - 37,775,722 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,668,593 - 42,668,755	NCBI	Rnor6.0
Rnor_5.0	13	47,772,856 - 47,773,018	UniSTS	Rnor5.0
RGSC_v3.4	13	38,859,302 - 38,859,464	UniSTS	RGSC3.4
Celera	13	37,564,195 - 37,564,357	UniSTS
Cytogenetic Map	13	q11	UniSTS

AU047140

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,414,221 - 37,414,349 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,309,384 - 42,309,508	NCBI	Rnor6.0
Rnor_5.0	13	47,414,713 - 47,414,837	UniSTS	Rnor5.0
RGSC_v3.4	13	38,488,439 - 38,488,565	UniSTS	RGSC3.4
Celera	13	37,209,145 - 37,209,274	UniSTS
Cytogenetic Map	13	q11	UniSTS

AU048869

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	37,887,947 - 37,888,081 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	42,780,913 - 42,781,044	NCBI	Rnor6.0
Rnor_5.0	13	47,884,948 - 47,885,079	UniSTS	Rnor5.0
RGSC_v3.4	13	38,972,216 - 38,972,347	UniSTS	RGSC3.4
Celera	13	37,676,423 - 37,676,554	UniSTS
Cytogenetic Map	13	q11	UniSTS

Genetic Models

This gene Nckap5 is modified in the following models/strains:

SS-Nckap5^em2Mcwi SS-Nckap5^em1Mcwi SS-Nckap5^em3Mcwi SS-Nckap5^em3Mcwi-/- SS-Nckap5^em1Mcwi-/- SS-Nckap5^em2Mcwi-/- SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5^em4Mcwi

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	11	66	155	91	90	59	29	59	6	291	127	11	134	81	92	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008761432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599040	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604709	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091164	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272676	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000038020 ⟹ ENSRNOP00000029665

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	39,923,318 - 40,756,311 (-)	Ensembl
mRatBN7.2 Ensembl	13	37,370,792 - 38,203,753 (-)	Ensembl
Rnor_6.0 Ensembl	13	42,265,806 - 42,885,440 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100167 ⟹ ENSRNOP00000080373

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	39,923,318 - 40,756,311 (-)	Ensembl
mRatBN7.2 Ensembl	13	37,371,369 - 38,283,268 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105224 ⟹ ENSRNOP00000085272

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	39,948,855 - 40,835,521 (-)	Ensembl
mRatBN7.2 Ensembl	13	37,371,278 - 38,283,268 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116447 ⟹ ENSRNOP00000084549

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	39,922,737 - 40,756,316 (-)	Ensembl
mRatBN7.2 Ensembl	13	37,370,792 - 38,203,753 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000125237 ⟹ ENSRNOP00000107266

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	39,922,737 - 40,505,124 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000133191 ⟹ ENSRNOP00000102787

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	39,922,996 - 40,513,900 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000140418 ⟹ ENSRNOP00000102892

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	39,923,313 - 40,504,947 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000150373 ⟹ ENSRNOP00000112421

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	39,952,316 - 40,505,124 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000153452 ⟹ ENSRNOP00000105361

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	39,922,737 - 40,774,045 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000167765 ⟹ ENSRNOP00000105951

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	39,923,301 - 40,281,070 (-)	Ensembl

RefSeq Acc Id:

XM_008769508 ⟹ XP_008767730

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,494,108 (-)	NCBI
mRatBN7.2	13	37,369,948 - 37,938,839 (-)	NCBI
Rnor_6.0	13	42,265,875 - 42,808,034 (-)	NCBI

Sequence:

show sequence

ACACACACACACACACAGAGCTTTCAGGCTCATATGAGAACAGGCAACATTTCAAAAATGGTAT
AGAATTATGTTTTATTTGCTTTAAAATTCAGCTTTCTTATAAAGGGAAAAGAGCAAACAATTAA
AAATCTATAAACAAAGTCAATGCAGAAGTAGTAATGAAACAGCCTCAGACATGAAAGTGACAGA
GGATCTATGCAAATGAGGTCAGTGGAACACTTCTTAATCTAGCATTCCATATGAATTCCTCTAT
TATCAACTCCAAAACAAAAGAGCCAGTGTTGTGATGCTGGACAGAGACGATGCCCCAGTGACCA
ATTACTTTAAATATTTCATATTAAGTACGGTGGAGGGAAGGAGGGAATTAAAGGACTCGGCTCC
TTTGGAGACCTCAAAAAATACTTCCCAGCCATTTGGGGGGTATCTCAGACCTGAGAACAGTCAC
TTGATCATGTGCTTTTGTCTCTCCAGGGAGAAGCTGGCTGTGGCCAGGCTGCAGAGAGAAGTTG
CCCAAAGGACAAGCCAAGGGGCCATGCAGGAGAAGCTGATACATGAGTTGGAAGAGGAACGGCA
GTTGCGGCTACAGAGTGAGGAACGGTTGCGGGAGGTGACCCTGGAGTCAGAGCGCAACAGGATC
CAGATGCTCGGCCTACAGCAGCAGTTTTCCAGAATGGAAGAAACTGTCCGAAGTCTGTTACAGA
GCCAAGGATCTCCAGAGCAGAAAAAGGAAGAACCTGCTAAGATCACAGCCTACCAGGAAAGAGT
ATCTGAAGAAGAGAGAAAAGAGCAAGCAGCACTGGGTGATCTCCGTGTGGAGGCTGATGAGGAC
TCCAGGAGCGAACACAGCAGTACTGAGGGGGGGAAAGAGGACAGCAGACTGCTCCTGAAGAGAC
TGAAGGCTTTGGAGGCGGAGAATTCAGCCCTGGCTCTGGAAAACGAGAATCAGAGAGAACAGTA
TGAGAGATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAGCTCTACTCACTCAAAAGGATCTA
AGGGAGGAGTGTGTAAAGTTGAAAACAAGAGTGTTTGACTTGGAGCAACAGAACCGAGCACTCA
GCATCCTGTTCCAACAGCGAGTCAGACCGGCTTCTGATGTCCTCCTCCAGGAACACCTCCAGAA
CGCAAAATCAGGAGCCCCTGCCTTGAAACACTCTGGCTCAGGGGTTGTCATCCCTGATCACCCC
TGTCCTCGAAACAGCTGCAGCAGTGGCAGCGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACT
CCAGTGGCTCCTCCTACACGTGGCAAGACAGGAAGCTCAATGGGAAAAGGCAAACATCACAGAT
CTGGGATAAAAGACTGAGTATCGATTCTTCGCTCCCAAGTGGCTTCACCAGCCCCGCAGATGAA
CTACCTCCAACCCGTATCAAAGAAAGCCACATTTTGGAAGGGCTGAGGAAGCTACAGAAGCGGA
AAGTGTTACTTGAGTCACCAGCGTCAGTGATGAGCAAATGGGGTTATAAAGATTGCATGAACTC
GAACGAAGGGATCTATTCGCCCGGGATTAAAAACAGCAGCCTTAAGGAGTGTCCCCCCTGCCAG
TCACCTGGCAGAGGGATCCCATGCCAGAATCTCCATCAGACCTTCAACTATGATGCAAATTCTC
ATGAGTATGCACACGAAGAATTCCTATCCTCAGCCTCGCCAAGAACATCTCCAAGCCAGGGCTG
CAGGATACAGAGCAGTAAATTGACACACAGTGTTTCAGACAGTCTATTCACCTGGGAGCCACAT
AGAAAATACTTTGCAGAAGGTACAGCCTCAGTTTATACCAGAGAAATGCCTGAAAGGCTAACTC
GTTGTGCTAGCCACTGCCCCTTAGAGAGGAAACTGTGCCCCAGCGTTCACCTGCCCTGGGTGCA
AAGAGACAGGGACCCACACAGCCAAGGTCCTGGCCATGTACCTCTGAACCTTCAACTTTCAGAT
ACTGATGACAATGAAACCCTACATGAGCTGCACATAGAGAGCAGCGATGAGAGAAGTCCTTCAG
ACTTGTCCTTGACTGGGGACACCGACAGGTCCATGGAGAACCTAGGGGTGAAATTTGGAAAGTC
TGAATGTGTCTCTCATGATAAGGGGAAAGAAGAATGTCCCACCCACTTAGAGACTAGTCCAAAA
GCATTCAGCTTCATCAAGCAGCAAAGGGTTGTCAAGAGGACCTCTTCAGAAGAATGCGTAACAG
TTATATTTGATGCAGAAAATGGAGAGCCTGTGGAATTCAGCTCTCACCAGGCTGGAGTTGTCAC
TGTCACCAGGGATGAAATTTCCATCAGCTCAACCCCTGCTGGGCCCTCAGAGGAACTCACTGAA
CTTTCACCTCAGGGAATTACTCATTTCCAGCCAGGGGCTACTGCAAGAGACTATCCTTTTCTGG
GGAGACCTGAAGAAGAGCCTAAGACAAACATTCCAAAAGATGAAAATGGTATTCTCACAGCTCC
GAATGACTCATTTAACTCTCCAACTACAGTAACTCAGAATTCCCCACGACCAAAGCTTGTTAAA
CCAACACAAGGAGTAGCCTGGCAGAGTAATTCTAGATCTGTGGCAAACATGAGTGTCTACACAA
AGCAAGGTCTGACAAAAATTCCTTCCAGAAGCAAGATTTCACCTCAAAAATCAAAACTGGTGGA
CCCTATGCCTACCACCCTAGTCCCTTCCAGTGGCCTAGGGACTCTTGCAAAAACACCAGCATCC
CCTACGGGGAAACTCTCACAGTGTACAAATGCAGAGAGCCCTGGTACTTTCTGTGATGTACAGC
CAGAATCACACATTCCAAAACACCCCACCCAGCTTCCTCATATCCCCAAAATTTCCAATAAGAA
GAATTGGGTTCAATGCCCCAAGAGTCAGACTGCAGGGATCCAATCAAGGCATCTCATGGGGAAA
AGTGATAATGGCGAATCCCCCACGAGGGCCAAACGCTGCGGCTCTGAGCCAAAGACAAGAATGA
GGTCTCCCTCCCCTCCAACTCCTCCAGGGAGGTCAGTCTCCCTCTTGGTCAGACCCAGTTATGA
CTATCCACCACTACCATCACCTGCCAAACCTGAAACTAAGGCCCCTGGTGACACCGTAAGTACA
GGGTTGAAGTCCCCAGTGTTGAAAGGATCCTCTGCTCCCCTCGTCTCTTCCAGTCCAGCTATGT
CAGAAATACAGAAGAAACCATCTGTGGCATCCAGGAAGTCTGCTTTCCCTACAGCTCTTCCCTC
CACCCAAGCAGTGGTGCATACCCGCTATCCTGAGCACACATCCTCCAGCCCATTTGCCGTGACG
GCTCCAGGGCCTACAAAAGTCTCTCCAAAAAGAGGTATCCCTAAAGCTCCCCATCCCCAAGCAC
TTGGAACCACCCACATGGACACAGACTTACAGACACCCAAGACTCGCCCTTCAAGCTATGAACT
ACTAGAGATGACATCCTGTAAAAACTTGTCTCCAGGGAGAAAAGGACAGTTAAGTGACAGCACT
GTGACGCCCCACAGGCCTTCCTTCTCAGGACCGAATGAATTCTTGACACCTCAGGTTAATAGTA
CATCCTCATCTTCCTCATCCTGTAGAAACCAGGGCACCTCACAAGGTGGCCAAAATCCTCCCGA
GAAAGGACCGAAAACTCGCCTCCCAGTAGGACTCAGAGTTCTCATGAAGTCTCCTCAGTTGCTC
AGGAAAACGTCTATGGTACCAGGGAAACAAGAAAAGGATAGCTTAAATGAAGCGTCTCGAAGTT
CTGTGACAGCGAACAAGTCTAATCCTGAGGACTCCAAAGACCCTGCAAGTCTGGAGACCTCAAG
AGATGAGAGAACCACAGCCTTACTAGGTCTGAGAGGTCCAGAGAGTCTAGCTAGAGGTCTTGGC
TTAGAGTCAACACCACCAGAGTCATTGGAAAGCAGCATCTCCAGAGATGATGGGAGAGACGGGG
TAGACAGCAGAGCCATAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGCCTGCTCTAGG
CATGAATGGAGCCAAAGCTCGGAGTCAGAGCTTCAGCTTCCACTTGGGAGAGAAGCCTTCCACA
CCCCCAATAGAAGGGCCAGGCAAGATTCGAACCCAGATTATTACCAACACGGCTGAGAGAGGCA
ATTCCCTCACTAGACAGAACATCTCCATGGAGGGGTCCCCAAGCAAGACTCCCTCTGTTTCAAC
ACCTGATAATCTGCCCAATGCTGGAAGGCCCCTGGGAAATCCCTTTTCCAGGCAGGGTTCTCTC
TGTAGCACAGGAAGTTCTAGTAGCCAGCATGGAAGCCCAAGCAAGTTACCTTTGAGGATGCTCA
CAAGGCCAGAAGGACTCCTCACTCCTGAGGAGGAAGATCAACGGTTCTCTACTCAGGAAGAATG
TCCCGGGAGAGGAGTACATGAACAATCTAGCAGTAACCACCATAGGCATCCATCATCTACTCTA
TCAGACTGCCCTCAATCCCTGCAAGTCCCAGGGAGGATACAGCGTCCAAGCAATTTGGAAACAA
ATGGGATATCTAAGCTAGAAACTTCTGGAAGGCATCCAGATGCTTCTCCAACTGGGACTAGTGT
CGTGAGCCCAGAAGCCCCCCTCTCACCCTCCATCGAAGAAAAGGTCATGTTGTGCATTCAGGAG
AATGTGGAAAAGGGCCAAGCACAGACAAAGTCCGCCTCTGTGGAAGTGAAGCCTAGGGCAGGGC
CTTCATTCACCAGCTGGTTTGGTTTTCGAAAGAGCAGGCTTCCAGCTCTCAGTAGCAGGAGAAT
GGAAGCTTCCAAGAGTAAAGTGGAAAAGAAAGATACAAAACTGAAATCCGAGAGGAAAAAAGAA
AAGAAGAAAGCTGAAGTACAATCGAAGAGAGAAAACGAACTGAGTAGGGGTACCAAAAAGGCAG
ATGGTCAGAGTCCAGACGATGGTTTGCAAAACACAGAGAGTCTGAAAGCAACCCAAGACATTTA
TAACCAAATGAAGTCAGAGCCAAGGAATAGACCCAGCCCTGCTGTGAGCCCAACAAAAGATGCC
TTCATGACAGAACTTCTAAACAGAGTTGATAAGAGAGCCGCTCTACAGACAGAAAGTGGATCAA
AAGGTGTCTCCTGCAGGAGCGTGTTAGAGGGCACCTCCCAGGGCTCCTGTTTCGCCAGCGGCTC
TGTGAGCACTCAAGGAAGTCAAAAGAAAAACATCAAAACCAAAGTCGATATGGAAAAACCAAGA
GAATCCTTGGGGGCAGAAGTCGACGAAGATGTACGAGAGGATGAAGAAGATAGAGTTGCTGACG
CTGCGCTCCAAAGCCACGTAATAGAATCGAACTGCCAGATGAGAACATTGGACAGCGGGATTGG
AACCTTCCCCCTCCCAGACTCAGGAAATCGCTCAATGGGACGATATATATGCCAGCAGGACTCC
CCAGAGGACACTGATCCCCTCCTGCCTCTCCAGCCAGCCCCTTCCATGCCATCCTCTGCCAGAG
CCCAAACCCTTGACCGTGAAGTGCCTTCCTCCACAGACAGCCAGAGCTCCTCAGAGTCCACGAT
CATCCATTCCGTATCTGACCCCAGCATGATGGCCAGAGGGATAAGAGCCTCACAGAGTCACCTT
CCCAAGCCCACCACCTCAGGAAAAACTAGTTTTGAAAAGCAGAATGGAGCAGAGTCAAAGGCTA
CCACTGGCCCATCATTTGAATATGCTGAGGATGCAGTGCCAAGTGAGCCCCTTTCAGGATGGAG
GGGCGAAGATGCTACTACTGAGAACCAGGAACTGAAACAAGTTGAAGAAACAAAAGAAGATCCT
GAGAATAGATTATCTGAAATTTCCCTGGAGTCATTCAATAAATTTAACAGCAATACTGTGATTT
TATTAGAAAAAGAGCAGTCTCCAAGTGAGGTTGAAGGACAAAAGGAAGAAAAAGGCAAAGAGAC
AGAAGTTTCTTTGAGTAGCTCGGATAGGCCTGGGGTGGACCACGTGGAGTCTCTGAGTGACTCT
CTGTATGATAGCTTCTCCTCGTGTGCAAGTCAAACTTCCAACGCCTAGCGGAAGAGCATCCCTC
AGTGAGACTCATGCATGGTGCACAGACTCCAGAGCTGGGGATGCAGAAGCACTAACTCCAGAGA
AGCTGATAGCAGCCAGTACACCAGCGTTTGCTTCTCTCACGGACTGATAAAAATCGCCTCTACT
CACTGTGTTTCAAGAGGGTTAAAAAAGCAAAATATGATAGAGAATTCTCAATGTTTGCACTTTT
TTTTGAGTATTTGTACAAAAGCTGTAAATTGGGGGGGGGAAGAGAAATTATATTTGTAGGGGAA
GAAGGATAGCAATAAAAAGTTGGCGCCATGCTCTTGAAA

hide sequence

RefSeq Acc Id:

XM_017599036 ⟹ XP_017454525

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,494,109 (-)	NCBI
mRatBN7.2	13	37,369,948 - 37,938,840 (-)	NCBI
Rnor_6.0	13	42,265,875 - 42,808,034 (-)	NCBI

Sequence:

show sequence

ACACACACACACACACAGAGCTTTCAGGCTCATATGAGAACAGGCAACATTTCAAAAATGGTAT
AGAATTATGTTTTATTTGCTTTAAAATTCAGCTTTCTTATAAAGGGAAAAGAGCAAACAATTAA
AAATCTATAAACAAAGTCAATGCAGAAGTAGTAATGAAACAGCCTCAGACATGAAAGTGACAGA
GGATCTATGCAAATGAGGTCAGTGGAACACTTCTTAATCTAGCATTCCATATGAATTCCTCTAT
TATCAACTCCAAAACAAAAGAGCCAGTGTTGTGATGCTGGACAGAGACGATGCCCCAGTGACCA
ATTACTTTAAATATTTCATATTAAGTACGGTGGAGGGAAGGAGGGAATTAAAGGACTCGGCTCC
TTTGGAGACCTCAAAAAATACTTCCCAGCCATTTGGGGGGTATCTCAGACCTGAGAACAGTCAC
TTGATCATGTGCTTTTGTCTCTCCAGGGAGAAGCTGGCTGTGGCCAGGCTGCAGAGAGAAGTTG
CCCAAAGGACAAGCCAAGGGGCCATGCAGGAGAAGCTGATACATGAGTTGGAAGAGGAACGGCA
GTTGCGGCTACAGAGTGAGGAACGGTTGCGGGAGGTGACCCTGGAGTCAGAGCGCAACAGGATC
CAGATGCTCGGCCTACAGCAGCAGTTTTCCAGAATGGAAGAAACTGTCCGAAGTCTGTTACAGA
GCCAAGGATCTCCAGAGCAGAAAAAGGAAGAACCTGCTAAGATCACAGCCTACCAGGAAAGAGT
ATCTGAAGAAGAGAGAAAAGAGCAAGCAGCACTGGGTGATCTCCGTGTGGAGGCTGATGAGGAC
TCCAGGAGCGAACACAGCAGTACTGAGGGGGGGAAAGAGGACAGCAGACTGCTCCTGAAGAGAC
TGAAGGCTTTGGAGGCGGAGAATTCAGCCCTGGCTCTGGAAAACGAGAATCAGAGAGAACAGTA
TGAGAGATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAGCTCTACTCACTCAAAAGGATCTA
AGGGAGGAGTGTGTAAAGTTGAAAACAAGAGTGTTTGACTTGGAGCAACAGAACCGAGCACTCA
GCATCCTGTTCCAACAGCGAGTCAGACCGGCTTCTGATGTCCTCCTCCAGCAAACATCACAGAT
CTGGGATAAAAGACTGAGTATCGATTCTTCGCTCCCAAGTGGCTTCACCAGCCCCGCAGATGAA
CTACCTCCAACCCGTATCAAAGAAAGCCACATTTTGGAAGGGCTGAGGAAGCTACAGAAGCGGA
AAGTGTTACTTGAGTCACCAGCGTCAGTGATGAGCAAATGGGGTTATAAAGATTGCATGAACTC
GAACGAAGGGATCTATTCGCCCGGGATTAAAAACAGCAGCCTTAAGGAGTGTCCCCCCTGCCAG
TCACCTGGCAGAGGGATCCCATGCCAGAATCTCCATCAGACCTTCAACTATGATGCAAATTCTC
ATGAGTATGCACACGAAGAATTCCTATCCTCAGCCTCGCCAAGAACATCTCCAAGCCAGGGCTG
CAGGATACAGAGCAGTAAATTGACACACAGTGTTTCAGACAGTCTATTCACCTGGGAGCCACAT
AGAAAATACTTTGCAGAAGGTACAGCCTCAGTTTATACCAGAGAAATGCCTGAAAGGCTAACTC
GTTGTGCTAGCCACTGCCCCTTAGAGAGGAAACTGTGCCCCAGCGTTCACCTGCCCTGGGTGCA
AAGAGACAGGGACCCACACAGCCAAGGTCCTGGCCATGTACCTCTGAACCTTCAACTTTCAGAT
ACTGATGACAATGAAACCCTACATGAGCTGCACATAGAGAGCAGCGATGAGAGAAGTCCTTCAG
ACTTGTCCTTGACTGGGGACACCGACAGGTCCATGGAGAACCTAGGGGTGAAATTTGGAAAGTC
TGAATGTGTCTCTCATGATAAGGGGAAAGAAGAATGTCCCACCCACTTAGAGACTAGTCCAAAA
GCATTCAGCTTCATCAAGCAGCAAAGGGTTGTCAAGAGGACCTCTTCAGAAGAATGCGTAACAG
TTATATTTGATGCAGAAAATGGAGAGCCTGTGGAATTCAGCTCTCACCAGGCTGGAGTTGTCAC
TGTCACCAGGGATGAAATTTCCATCAGCTCAACCCCTGCTGGGCCCTCAGAGGAACTCACTGAA
CTTTCACCTCAGGGAATTACTCATTTCCAGCCAGGGGCTACTGCAAGAGACTATCCTTTTCTGG
GGAGACCTGAAGAAGAGCCTAAGACAAACATTCCAAAAGATGAAAATGGTATTCTCACAGCTCC
GAATGACTCATTTAACTCTCCAACTACAGTAACTCAGAATTCCCCACGACCAAAGCTTGTTAAA
CCAACACAAGGAGTAGCCTGGCAGAGTAATTCTAGATCTGTGGCAAACATGAGTGTCTACACAA
AGCAAGGTCTGACAAAAATTCCTTCCAGAAGCAAGATTTCACCTCAAAAATCAAAACTGGTGGA
CCCTATGCCTACCACCCTAGTCCCTTCCAGTGGCCTAGGGACTCTTGCAAAAACACCAGCATCC
CCTACGGGGAAACTCTCACAGTGTACAAATGCAGAGAGCCCTGGTACTTTCTGTGATGTACAGC
CAGAATCACACATTCCAAAACACCCCACCCAGCTTCCTCATATCCCCAAAATTTCCAATAAGAA
GAATTGGGTTCAATGCCCCAAGAGTCAGACTGCAGGGATCCAATCAAGGCATCTCATGGGGAAA
AGTGATAATGGCGAATCCCCCACGAGGGCCAAACGCTGCGGCTCTGAGCCAAAGACAAGAATGA
GGTCTCCCTCCCCTCCAACTCCTCCAGGGAGGTCAGTCTCCCTCTTGGTCAGACCCAGTTATGA
CTATCCACCACTACCATCACCTGCCAAACCTGAAACTAAGGCCCCTGGTGACACCGTAAGTACA
GGGTTGAAGTCCCCAGTGTTGAAAGGATCCTCTGCTCCCCTCGTCTCTTCCAGTCCAGCTATGT
CAGAAATACAGAAGAAACCATCTGTGGCATCCAGGAAGTCTGCTTTCCCTACAGCTCTTCCCTC
CACCCAAGCAGTGGTGCATACCCGCTATCCTGAGCACACATCCTCCAGCCCATTTGCCGTGACG
GCTCCAGGGCCTACAAAAGTCTCTCCAAAAAGAGGTATCCCTAAAGCTCCCCATCCCCAAGCAC
TTGGAACCACCCACATGGACACAGACTTACAGACACCCAAGACTCGCCCTTCAAGCTATGAACT
ACTAGAGATGACATCCTGTAAAAACTTGTCTCCAGGGAGAAAAGGACAGTTAAGTGACAGCACT
GTGACGCCCCACAGGCCTTCCTTCTCAGGACCGAATGAATTCTTGACACCTCAGGTTAATAGTA
CATCCTCATCTTCCTCATCCTGTAGAAACCAGGGCACCTCACAAGGTGGCCAAAATCCTCCCGA
GAAAGGACCGAAAACTCGCCTCCCAGTAGGACTCAGAGTTCTCATGAAGTCTCCTCAGTTGCTC
AGGAAAACGTCTATGGTACCAGGGAAACAAGAAAAGGATAGCTTAAATGAAGCGTCTCGAAGTT
CTGTGACAGCGAACAAGTCTAATCCTGAGGACTCCAAAGACCCTGCAAGTCTGGAGACCTCAAG
AGATGAGAGAACCACAGCCTTACTAGGTCTGAGAGGTCCAGAGAGTCTAGCTAGAGGTCTTGGC
TTAGAGTCAACACCACCAGAGTCATTGGAAAGCAGCATCTCCAGAGATGATGGGAGAGACGGGG
TAGACAGCAGAGCCATAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGCCTGCTCTAGG
CATGAATGGAGCCAAAGCTCGGAGTCAGAGCTTCAGCTTCCACTTGGGAGAGAAGCCTTCCACA
CCCCCAATAGAAGGGCCAGGCAAGATTCGAACCCAGATTATTACCAACACGGCTGAGAGAGGCA
ATTCCCTCACTAGACAGAACATCTCCATGGAGGGGTCCCCAAGCAAGACTCCCTCTGTTTCAAC
ACCTGATAATCTGCCCAATGCTGGAAGGCCCCTGGGAAATCCCTTTTCCAGGCAGGGTTCTCTC
TGTAGCACAGGAAGTTCTAGTAGCCAGCATGGAAGCCCAAGCAAGTTACCTTTGAGGATGCTCA
CAAGGCCAGAAGGACTCCTCACTCCTGAGGAGGAAGATCAACGGTTCTCTACTCAGGAAGAATG
TCCCGGGAGAGGAGTACATGAACAATCTAGCAGTAACCACCATAGGCATCCATCATCTACTCTA
TCAGACTGCCCTCAATCCCTGCAAGTCCCAGGGAGGATACAGCGTCCAAGCAATTTGGAAACAA
ATGGGATATCTAAGCTAGAAACTTCTGGAAGGCATCCAGATGCTTCTCCAACTGGGACTAGTGT
CGTGAGCCCAGAAGCCCCCCTCTCACCCTCCATCGAAGAAAAGGTCATGTTGTGCATTCAGGAG
AATGTGGAAAAGGGCCAAGCACAGACAAAGTCCGCCTCTGTGGAAGTGAAGCCTAGGGCAGGGC
CTTCATTCACCAGCTGGTTTGGTTTTCGAAAGAGCAGGCTTCCAGCTCTCAGTAGCAGGAGAAT
GGAAGCTTCCAAGAGTAAAGTGGAAAAGAAAGATACAAAACTGAAATCCGAGAGGAAAAAAGAA
AAGAAGAAAGCTGAAGTACAATCGAAGAGAGAAAACGAACTGAGTAGGGGTACCAAAAAGGCAG
ATGGTCAGAGTCCAGACGATGGTTTGCAAAACACAGAGAGTCTGAAAGCAACCCAAGACATTTA
TAACCAAATGAAGTCAGAGCCAAGGAATAGACCCAGCCCTGCTGTGAGCCCAACAAAAGATGCC
TTCATGACAGAACTTCTAAACAGAGTTGATAAGAGAGCCGCTCTACAGACAGAAAGTGGATCAA
AAGGTGTCTCCTGCAGGAGCGTGTTAGAGGGCACCTCCCAGGGCTCCTGTTTCGCCAGCGGCTC
TGTGAGCACTCAAGGAAGTCAAAAGAAAAACATCAAAACCAAAGTCGATATGGAAAAACCAAGA
GAATCCTTGGGGGCAGAAGTCGACGAAGATGTACGAGAGGATGAAGAAGATAGAGTTGCTGACG
CTGCGCTCCAAAGCCACGTAATAGAATCGAACTGCCAGATGAGAACATTGGACAGCGGGATTGG
AACCTTCCCCCTCCCAGACTCAGGAAATCGCTCAATGGGACGATATATATGCCAGCAGGACTCC
CCAGAGGACACTGATCCCCTCCTGCCTCTCCAGCCAGCCCCTTCCATGCCATCCTCTGCCAGAG
CCCAAACCCTTGACCGTGAAGTGCCTTCCTCCACAGACAGCCAGAGCTCCTCAGAGTCCACGAT
CATCCATTCCGTATCTGACCCCAGCATGATGGCCAGAGGGATAAGAGCCTCACAGAGTCACCTT
CCCAAGCCCACCACCTCAGGAAAAACTAGTTTTGAAAAGCAGAATGGAGCAGAGTCAAAGGCTA
CCACTGGCCCATCATTTGAATATGCTGAGGATGCAGTGCCAAGTGAGCCCCTTTCAGGATGGAG
GGGCGAAGATGCTACTACTGAGAACCAGGAACTGAAACAAGTTGAAGAAACAAAAGAAGATCCT
GAGAATAGATTATCTGAAATTTCCCTGGAGTCATTCAATAAATTTAACAGCAATACTGTGATTT
TATTAGAAAAAGAGCAGTCTCCAAGTGAGGTTGAAGGACAAAAGGAAGAAAAAGGCAAAGAGAC
AGAAGTTTCTTTGAGTAGCTCGGATAGGCCTGGGGTGGACCACGTGGAGTCTCTGAGTGACTCT
CTGTATGATAGCTTCTCCTCGTGTGCAAGTCAAACTTCCAACGCCTAGCGGAAGAGCATCCCTC
AGTGAGACTCATGCATGGTGCACAGACTCCAGAGCTGGGGATGCAGAAGCACTAACTCCAGAGA
AGCTGATAGCAGCCAGTACACCAGCGTTTGCTTCTCTCACGGACTGATAAAAATCGCCTCTACT
CACTGTGTTTCAAGAGGGTTAAAAAAGCAAAATATGATAGAGAATTCTCAATGTTTGCACTTTT
TTTTGAGTATTTGTACAAAAGCTGTAAATTGGGGGGGGGAAGAGAAATTATATTTGTAGGGGAA
GAAGGATAGCAATAAAAAGTTGGCGCCATGCTCTTGAAA

hide sequence

RefSeq Acc Id:

XM_017599038 ⟹ XP_017454527

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,923,987 - 40,494,110 (-)	NCBI
mRatBN7.2	13	37,371,256 - 37,938,841 (-)	NCBI
Rnor_6.0	13	42,266,389 - 42,808,034 (-)	NCBI

Sequence:

show sequence

ACACACACACACACACAGAGCTTTCAGGCTCATATGAGAACAGGCAACATTTCAAAAATGGTAT
AGAATTATGTTTTATTTGCTTTAAAATTCAGCTTTCTTATAAAGGGAAAAGAGCAAACAATTAA
AAATCTATAAACAAAGTCAATGCAGAAGTAGTAATGAAACAGCCTCAGACATGAAAGTGACAGA
GGATCTATGCAAATGAGGTCAGTGGAACACTTCTTAATCTAGCATTCCATATGAATTCCTCTAT
TATCAACTCCAAAACAAAAGAGCCAGTGTTGTGATGCTGGACAGAGACGATGCCCCAGTGACCA
ATTACTTTAAATATTTCATATTAAGTACGGTGGAGGGAAGGAGGGAATTAAAGGACTCGGCTCC
TTTGGAGACCTCAAAAAATACTTCCCAGCCATTTGGGGGGTATCTCAGACCTGAGAACAGTCAC
TTGATCATGTGCTTTTGTCTCTCCAGGGAGAAGCTGGCTGTGGCCAGGCTGCAGAGAGAAGTTG
CCCAAAGGACAAGCCAAGGGGCCATGCAGGAGAAGCTGATACATGAGTTGGAAGAGGAACGGCA
GTTGCGGCTACAGAGTGAGGAACGGTTGCGGGAGGTGACCCTGGAGTCAGAGCGCAACAGGATC
CAGATGCTCGGCCTACAGCAGCAGTTTTCCAGAATGGAAGAAACTGTCCGAAGTCTGTTACAGA
GCCAAGGATCTCCAGAGCAGAAAAAGGAAGAACCTGCTAAGATCACAGCCTACCAGGAAAGAGT
ATCTGAAGAAGAGAGAAAAGAGCAAGCAGCACTGGGTGATCTCCGTGTGGAGGCTGATGAGGAC
TCCAGGAGCGAACACAGCAGTACTGAGGGGGGGAAAGAGGACAGCAGACTGCTCCTGAAGAGAC
TGAAGGCTTTGGAGGCGGAGAATTCAGCCCTGGCTCTGGAAAACGAGAATCAGAGAGAACAGTA
TGAGAGATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAGCTCTACTCACTCAAAAGGATCTA
AGGGAGGAGTGTGTAAAGTTGAAAACAAGAGTGTTTGACTTGGAGCAACAGAACCGAGCACTCA
GCATCCTGTTCCAACAGCGAGTCAGACCGGCTTCTGATGTCCTCCTCCAGGAACACCTCCAGAA
CGCAAAATCAGGAGCCCCTGCCTTGAAACACTCTGGCTCAGGGGTTGTCATCCCTGATCACCCC
TGTCCTCGAAACAGCTGCAGCAGTGGCAGCGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACT
CCAGTGGCTCCTCCTACACGTGGCAAGACAGGAAGCTCAATGGGAAAAGGCAAACATCACAGAT
CTGGGATAAAAGACTGAGTATCGATTCTTCGCTCCCAAGTGGCTTCACCAGCCCCGCAGATGAA
CTACCTCCAACCCGTATCAAAGAAAGCCACATTTTGGAAGGGCTGAGGAAGCTACAGAAGCGGA
AAGTGTTACTTGAGTCACCAGCGTCAGTGATGAGCAAATGGGGTTATAAAGATTGCATGAACTC
GAACGAAGGGATCTATTCGCCCGGGATTAAAAACAGCAGCCTTAAGGAGTGTCCCCCCTGCCAG
TCACCTGGCAGAGGGATCCCATGCCAGAATCTCCATCAGACCTTCAACTATGATGCAAATTCTC
ATGAGTATGCACACGAAGAATTCCTATCCTCAGCCTCGCCAAGAACATCTCCAAGCCAGGGCTG
CAGGATACAGAGCAGTAAATTGACACACAGTGTTTCAGACAGTCTATTCACCTGGGAGCCACAT
AGAAAATACTTTGCAGAAGGTACAGCCTCAGTTTATACCAGAGAAATGCCTGAAAGGCTAACTC
GTTGTGCTAGCCACTGCCCCTTAGAGAGGAAACTGTGCCCCAGCGTTCACCTGCCCTGGGTGCA
AAGAGACAGGGACCCACACAGCCAAGGTCCTGGCCATGTACCTCTGAACCTTCAACTTTCAGAT
ACTGATGACAATGAAACCCTACATGAGCTGCACATAGAGAGCAGCGATGAGAGAAGTCCTTCAG
ACTTGTCCTTGACTGGGGACACCGACAGGTCCATGGAGAACCTAGGGGTGAAATTTGGAAAGTC
TGAATGTGTCTCTCATGATAAGGGGAAAGAAGAATGTCCCACCCACTTAGAGACTAGTCCAAAA
GCATTCAGCTTCATCAAGCAGCAAAGGGTTGTCAAGAGGACCTCTTCAGAAGAATGCGTAACAG
TTATATTTGATGCAGAAAATGGAGAGCCTGTGGAATTCAGCTCTCACCAGGCTGGAGTTGTCAC
TGTCACCAGGGATGAAATTTCCATCAGCTCAACCCCTGCTGGGCCCTCAGAGGAACTCACTGAA
CTTTCACCTCAGGGAATTACTCATTTCCAGCCAGGGGCTACTGCAAGAGACTATCCTTTTCTGG
GGAGACCTGAAGAAGAGCCTAAGACAAACATTCCAAAAGATGAAAATGGTATTCTCACAGCTCC
GAATGACTCATTTAACTCTCCAACTACAGTAACTCAGAATTCCCCACGACCAAAGCTTGTTAAA
CCAACACAAGGAGTAGCCTGGCAGAGTAATTCTAGATCTGTGGCAAACATGAGTGTCTACACAA
AGCAAGGTCTGACAAAAATTCCTTCCAGAAGCAAGATTTCACCTCAAAAATCAAAACTGGTGGA
CCCTATGCCTACCACCCTAGTCCCTTCCAGTGGCCTAGGGACTCTTGCAAAAACACCAGCATCC
CCTACGGGGAAACTCTCACAGTGTACAAATGCAGAGAGCCCTGGTACTTTCTGTGATGTACAGC
CAGAATCACACATTCCAAAACACCCCACCCAGCTTCCTCATATCCCCAAAATTTCCAATAAGAA
GAATTGGGTTCAATGCCCCAAGAGTCAGACTGCAGGGATCCAATCAAGGCATCTCATGGGGAAA
AGTGATAATGGCGAATCCCCCACGAGGGCCAAACGCTGCGGCTCTGAGCCAAAGACAAGAATGA
GGTCTCCCTCCCCTCCAACTCCTCCAGGGAGGTCAGTCTCCCTCTTGGTCAGACCCAGTTATGA
CTATCCACCACTACCATCACCTGCCAAACCTGAAACTAAGGCCCCTGGTGACACCGTAAGTACA
GGGTTGAAGTCCCCAGTGTTGAAAGGATCCTCTGCTCCCCTCGTCTCTTCCAGTCCAGCTATGT
CAGAAATACAGAAGAAACCATCTGTGGCATCCAGGAAGTCTGCTTTCCCTACAGCTCTTCCCTC
CACCCAAGCAGTGGTGCATACCCGCTATCCTGAGCACACATCCTCCAGCCCATTTGCCGTGACG
GCTCCAGGGCCTACAAAAGTCTCTCCAAAAAGAGGTATCCCTAAAGCTCCCCATCCCCAAGCAC
TTGGAACCACCCACATGGACACAGACTTACAGACACCCAAGACTCGCCCTTCAAGCTATGAACT
ACTAGAGATGACATCCTGTAAAAACTTGTCTCCAGGGAGAAAAGGACAGTTAAGTGACAGCACT
GTGACGCCCCACAGGCCTTCCTTCTCAGGACCGAATGAATTCTTGACACCTCAGGTTAATAGTA
CATCCTCATCTTCCTCATCCTGTAGAAACCAGGGCACCTCACAAGGTGGCCAAAATCCTCCCGA
GAAAGGACCGAAAACTCGCCTCCCAGTAGGACTCAGAGTTCTCATGAAGTCTCCTCAGTTGCTC
AGGAAAACGTCTATGGTACCAGGGAAACAAGAAAAGGATAGCTTAAATGAAGCGTCTCGAAGTT
CTGTGACAGCGAACAAGTCTAATCCTGAGGACTCCAAAGACCCTGCAAGTCTGGAGACCTCAAG
AGATGAGAGAACCACAGCCTTACTAGGTCTGAGAGGTCCAGAGAGTCTAGCTAGAGGTCTTGGC
TTAGAGTCAACACCACCAGAGTCATTGGAAAGCAGCATCTCCAGAGATGATGGGAGAGACGGGG
TAGACAGCAGAGCCATAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGCCTGCTCTAGG
CATGAATGGAGCCAAAGCTCGGAGTCAGAGCTTCAGCTTCCACTTGGGAGAGAAGCCTTCCACA
CCCCCAATAGAAGGGCCAGGCAAGATTCGAACCCAGATTATTACCAACACGGCTGAGAGAGGCA
ATTCCCTCACTAGACAGAACATCTCCATGGAGGGGTCCCCAAGCAAGACTCCCTCTGTTTCAAC
ACCTGATAATCTGCCCAATGCTGGAAGGCCCCTGGGAAATCCCTTTTCCAGGCAGGGTTCTCTC
TGTAGCACAGGAAGTTCTAGTAGCCAGCATGGAAGCCCAAGCAAGTTACCTTTGAGGATGCTCA
CAAGGCCAGAAGGACTCCTCACTCCTGAGGAGGAAGATCAACGGTTCTCTACTCAGGAAGAATG
TCCCGGGAGAGGAGTACATGAACAATCTAGCAGTAACCACCATAGGCATCCATCATCTACTCTA
TCAGACTGCCCTCAATCCCTGCAAGTCCCAGGGAGGATACAGCGTCCAAGCAATTTGGAAACAA
ATGGGATATCTAAGCTAGAAACTTCTGGAAGGCATCCAGATGCTTCTCCAACTGGGACTAGTGT
CGTGAGCCCAGAAGCCCCCCTCTCACCCTCCATCGAAGAAAAGGTCATGTTGTGCATTCAGGAG
AATGTGGAAAAGGGCCAAGCACAGACAAAGTCCGCCTCTGTGGAAGTGAAGCCTAGGGCAGGGC
CTTCATTCACCAGCTGGTTTGGTTTTCGAAAGAGCAGGCTTCCAGCTCTCAGTAGCAGGAGAAT
GGAAGCTTCCAAGAGTAAAGTGGAAAAGAAAGATACAAAACTGAAATCCGAGAGGAAAAAAGAA
AAGAAGAAAGCTGAAGTACAATCGAAGAGAGAAAACGAACTGAGTAGGGGTACCAAAAAGGCAG
ATGGTCAGAGTCCAGACGATGGTTTGCAAAACACAGAGAGTCTGAAAGCAACCCAAGACATTTA
TAACCAAATGAAGTCAGAGCCAAGGAATAGACCCAGCCCTGCTGTGAGCCCAACAAAAGATGCC
TTCATGACAGAACTTCTAAACAGAGTTGATAAGAGAGCCGCTCTACAGACAGAAAGTGGATCAA
AAGGTGTCTCCTGCAGGAGCGTGTTAGAGGGCACCTCCCAGGGCTCCTGTTTCGCCAGCGGCTC
TGTGAGCACTCAAGGAAGTCAAAAGAAAAACATCAAAACCAAAGTCGATATGGAAAAACCAAGA
GAATCCTTGGGGGCAGAAGTCGACGAAGATGTACGAGAGGATGAAGAAGATAGAGTTGCTGACG
CTGCGCTCCAAAGCCACGTAATAGAATCGAACTGCCAGATGAGAACATTGGACAGCGGGATTGG
AACCTTCCCCCTCCCAGACTCAGGAAATCGCTCAATGGGACGATATATATGCCAGCAGGACTCC
CCAGAGGACACTGATCCCCTCCTGCCTCTCCAGCCAGCCCCTTCCATGCCATCCTCTGCCAGAG
CCCAAACCCTTGACCGTGAAGTGCCTTCCTCCACAGACAGCCAGAGCTCCTCAGAGTCCACGAT
CATCCATTCCGTATCTGACCCCAGCATGATGGCCAGAGGGATAAGAGCCTCACAGAGTCACCTT
CCCAAGCCCACCACCTCAGGAAAAACTAGTTTTGAAAAGCAGAATGGAGCAGAGTCAAAGGCTA
CCACTGGCCCATCATTTGAATATGCTGAGGATGCAGTGCCAAGTGAGCCCCTTTCAGGATGGAG
GGGCGAAGATGCTACTACTGAGAACCAGGTGGTGGTAATACCTCACCCTGAATCCCCCGTGGAA
AGAAAGAGCCATGATTAAGCTGAAATTCCTGGAAAACAGGAACTGAAACAAGTTGAAGAAACAA
AAGAAGATCCTGAGAATAGATTATCTGAAATTTCCCTGGAGTCATTCA

hide sequence

RefSeq Acc Id:

XM_017599040 ⟹ XP_017454529

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,835,849 (-)	NCBI
mRatBN7.2	13	37,369,948 - 38,283,257 (-)	NCBI
Rnor_6.0	13	42,265,875 - 43,049,232 (-)	NCBI

Sequence:

show sequence

TGGACGTGGAGACAGACGGGGGATTCTTATAAATTGCAAAGGAAAATACATCACTCACCCATGG
AGGGGAAGAGACAGCTGGACAGAAGGGACTTTGGTAAAAGACTCTCTCTGGATAGTAGTCTTGT
GGAATACATGGATTCAAACAAATGCATTGAACACCTGCTGGCACAACTCAGGGAGCAGCACAGA
AGCCTCTGGCGGGAGAAGCTGGCTGTGGCCAGGCTGCAGAGAGAAGTTGCCCAAAGGACAAGCC
AAGGGGCCATGCAGGAGAAGCTGATACATGAGTTGGAAGAGGAACGGCAGTTGCGGCTACAGAG
TGAGGAACGGTTGCGGGAGGTGACCCTGGAGTCAGAGCGCAACAGGATCCAGATGCTCGGCCTA
CAGCAGCAGTTTTCCAGAATGGAAGAAACTGTCCGAAGTCTGTTACAGAGCCAAGGATCTCCAG
AGCAGAAAAAGGAAGAACCTGCTAAGATCACAGCCTACCAGGAAAGAGTATCTGAAGAAGAGAG
AAAAGAGCAAGCAGCACTGGGTGATCTCCGTGTGGAGGCTGATGAGGACTCCAGGAGCGAACAC
AGCAGTACTGAGGGGGGGAAAGAGGACAGCAGACTGCTCCTGAAGAGACTGAAGGCTTTGGAGG
CGGAGAATTCAGCCCTGGCTCTGGAAAACGAGAATCAGAGAGAACAGTATGAGAGATGTCTTGA
TGAGGTAGCCAACCAAGTTGTTCGAGCTCTACTCACTCAAAAGGATCTAAGGGAGGAGTGTGTA
AAGTTGAAAACAAGAGTGTTTGACTTGGAGCAACAGAACCGAGCACTCAGCATCCTGTTCCAAC
AGCGAGTCAGACCGGCTTCTGATGTCCTCCTCCAGGAACACCTCCAGAACGCAAAATCAGGAGC
CCCTGCCTTGAAACACTCTGGCTCAGGGGTTGTCATCCCTGATCACCCCTGTCCTCGAAACAGC
TGCAGCAGTGGCAGCGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACTCCAGTGGCTCCTCCT
ACACGTGGCAAGACAGGAAGCTCAATGGGAAAAGGCAAACATCACAGATCTGGGATAAAAGACT
GAGTATCGATTCTTCGCTCCCAAGTGGCTTCACCAGCCCCGCAGATGAACTACCTCCAACCCGT
ATCAAAGAAAGCCACATTTTGGAAGGGCTGAGGAAGCTACAGAAGCGGAAAGTGTTACTTGAGT
CACCAGCGTCAGTGATGAGCAAATGGGGTTATAAAGATTGCATGAACTCGAACGAAGGGATCTA
TTCGCCCGGGATTAAAAACAGCAGCCTTAAGGAGTGTCCCCCCTGCCAGTCACCTGGCAGAGGG
ATCCCATGCCAGAATCTCCATCAGACCTTCAACTATGATGCAAATTCTCATGAGTATGCACACG
AAGAATTCCTATCCTCAGCCTCGCCAAGAACATCTCCAAGCCAGGGCTGCAGGATACAGAGCAG
TAAATTGACACACAGTGTTTCAGACAGTCTATTCACCTGGGAGCCACATAGAAAATACTTTGCA
GAAGGTACAGCCTCAGTTTATACCAGAGAAATGCCTGAAAGGCTAACTCGTTGTGCTAGCCACT
GCCCCTTAGAGAGGAAACTGTGCCCCAGCGTTCACCTGCCCTGGGTGCAAAGAGACAGGGACCC
ACACAGCCAAGGTCCTGGCCATGTACCTCTGAACCTTCAACTTTCAGATACTGATGACAATGAA
ACCCTACATGAGCTGCACATAGAGAGCAGCGATGAGAGAAGTCCTTCAGACTTGTCCTTGACTG
GGGACACCGACAGGTCCATGGAGAACCTAGGGGTGAAATTTGGAAAGTCTGAATGTGTCTCTCA
TGATAAGGGGAAAGAAGAATGTCCCACCCACTTAGAGACTAGTCCAAAAGCATTCAGCTTCATC
AAGCAGCAAAGGGTTGTCAAGAGGACCTCTTCAGAAGAATGCGTAACAGTTATATTTGATGCAG
AAAATGGAGAGCCTGTGGAATTCAGCTCTCACCAGGCTGGAGTTGTCACTGTCACCAGGGATGA
AATTTCCATCAGCTCAACCCCTGCTGGGCCCTCAGAGGAACTCACTGAACTTTCACCTCAGGGA
ATTACTCATTTCCAGCCAGGGGCTACTGCAAGAGACTATCCTTTTCTGGGGAGACCTGAAGAAG
AGCCTAAGACAAACATTCCAAAAGATGAAAATGGTATTCTCACAGCTCCGAATGACTCATTTAA
CTCTCCAACTACAGTAACTCAGAATTCCCCACGACCAAAGCTTGTTAAACCAACACAAGGAGTA
GCCTGGCAGAGTAATTCTAGATCTGTGGCAAACATGAGTGTCTACACAAAGCAAGGTCTGACAA
AAATTCCTTCCAGAAGCAAGATTTCACCTCAAAAATCAAAACTGGTGGACCCTATGCCTACCAC
CCTAGTCCCTTCCAGTGGCCTAGGGACTCTTGCAAAAACACCAGCATCCCCTACGGGGAAACTC
TCACAGTGTACAAATGCAGAGAGCCCTGGTACTTTCTGTGATGTACAGCCAGAATCACACATTC
CAAAACACCCCACCCAGCTTCCTCATATCCCCAAAATTTCCAATAAGAAGAATTGGGTTCAATG
CCCCAAGAGTCAGACTGCAGGGATCCAATCAAGGCATCTCATGGGGAAAAGTGATAATGGCGAA
TCCCCCACGAGGGCCAAACGCTGCGGCTCTGAGCCAAAGACAAGAATGAGGTCTCCCTCCCCTC
CAACTCCTCCAGGGAGGTCAGTCTCCCTCTTGGTCAGACCCAGTTATGACTATCCACCACTACC
ATCACCTGCCAAACCTGAAACTAAGGCCCCTGGTGACACCGTAAGTACAGGGTTGAAGTCCCCA
GTGTTGAAAGGATCCTCTGCTCCCCTCGTCTCTTCCAGTCCAGCTATGTCAGAAATACAGAAGA
AACCATCTGTGGCATCCAGGAAGTCTGCTTTCCCTACAGCTCTTCCCTCCACCCAAGCAGTGGT
GCATACCCGCTATCCTGAGCACACATCCTCCAGCCCATTTGCCGTGACGGCTCCAGGGCCTACA
AAAGTCTCTCCAAAAAGAGGTATCCCTAAAGCTCCCCATCCCCAAGCACTTGGAACCACCCACA
TGGACACAGACTTACAGACACCCAAGACTCGCCCTTCAAGCTATGAACTACTAGAGATGACATC
CTGTAAAAACTTGTCTCCAGGGAGAAAAGGACAGTTAAGTGACAGCACTGTGACGCCCCACAGG
CCTTCCTTCTCAGGACCGAATGAATTCTTGACACCTCAGGTTAATAGTACATCCTCATCTTCCT
CATCCTGTAGAAACCAGGGCACCTCACAAGGTGGCCAAAATCCTCCCGAGAAAGGACCGAAAAC
TCGCCTCCCAGTAGGACTCAGAGTTCTCATGAAGTCTCCTCAGTTGCTCAGGAAAACGTCTATG
GTACCAGGGAAACAAGAAAAGGATAGCTTAAATGAAGCGTCTCGAAGTTCTGTGACAGCGAACA
AGTCTAATCCTGAGGACTCCAAAGACCCTGCAAGTCTGGAGACCTCAAGAGATGAGAGAACCAC
AGCCTTACTAGGTCTGAGAGGTCCAGAGAGTCTAGCTAGAGGTCTTGGCTTAGAGTCAACACCA
CCAGAGTCATTGGAAAGCAGCATCTCCAGAGATGATGGGAGAGACGGGGTAGACAGCAGAGCCA
TAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGCCTGCTCTAGGCATGAATGGAGCCAA
AGCTCGGAGTCAGAGCTTCAGCTTCCACTTGGGAGAGAAGCCTTCCACACCCCCAATAGAAGGG
CCAGGCAAGATTCGAACCCAGATTATTACCAACACGGCTGAGAGAGGCAATTCCCTCACTAGAC
AGAACATCTCCATGGAGGGGTCCCCAAGCAAGACTCCCTCTGTTTCAACACCTGATAATCTGCC
CAATGCTGGAAGGCCCCTGGGAAATCCCTTTTCCAGGCAGGGTTCTCTCTGTAGCACAGGAAGT
TCTAGTAGCCAGCATGGAAGCCCAAGCAAGTTACCTTTGAGGATGCTCACAAGGCCAGAAGGAC
TCCTCACTCCTGAGGAGGAAGATCAACGGTTCTCTACTCAGGAAGAATGTCCCGGGAGAGGAGT
ACATGAACAATCTAGCAGTAACCACCATAGGCATCCATCATCTACTCTATCAGACTGCCCTCAA
TCCCTGCAAGTCCCAGGGAGGATACAGCGTCCAAGCAATTTGGAAACAAATGGGATATCTAAGC
TAGAAACTTCTGGAAGGCATCCAGATGCTTCTCCAACTGGGACTAGTGTCGTGAGCCCAGAAGC
CCCCCTCTCACCCTCCATCGAAGAAAAGGTCATGTTGTGCATTCAGGAGAATGTGGAAAAGGGC
CAAGCACAGACAAAGTCCGCCTCTGTGGAAGTGAAGCCTAGGGCAGGGCCTTCATTCACCAGCT
GGTTTGGTTTTCGAAAGAGCAGGCTTCCAGCTCTCAGTAGCAGGAGAATGGAAGCTTCCAAGAG
TAAAGTGGAAAAGAAAGATACAAAACTGAAATCCGAGAGGAAAAAAGAAAAGAAGAAAGCTGAA
GTACAATCGAAGAGAGAAAACGAACTGAGTAGGGGTACCAAAAAGGCAGATGGTCAGAGTCCAG
ACGATGGTTTGCAAAACACAGAGAGTCTGAAAGCAACCCAAGACATTTATAACCAAATGAAGTC
AGAGCCAAGGAATAGACCCAGCCCTGCTGTGAGCCCAACAAAAGATGCCTTCATGACAGAACTT
CTAAACAGAGTTGATAAGAGAGCCGCTCTACAGACAGAAAGTGGATCAAAAGGTGTCTCCTGCA
GGAGCGTGTTAGAGGGCACCTCCCAGGGCTCCTGTTTCGCCAGCGGCTCTGTGAGCACTCAAGG
AAGTCAAAAGAAAAACATCAAAACCAAAGTCGATATGGAAAAACCAAGAGAATCCTTGGGGGCA
GAAGTCGACGAAGATGTACGAGAGGATGAAGAAGATAGAGTTGCTGACGCTGCGCTCCAAAGCC
ACGTAATAGAATCGAACTGCCAGATGAGAACATTGGACAGCGGGATTGGAACCTTCCCCCTCCC
AGACTCAGGAAATCGCTCAATGGGACGATATATATGCCAGCAGGACTCCCCAGAGGACACTGAT
CCCCTCCTGCCTCTCCAGCCAGCCCCTTCCATGCCATCCTCTGCCAGAGCCCAAACCCTTGACC
GTGAAGTGCCTTCCTCCACAGACAGCCAGAGCTCCTCAGAGTCCACGATCATCCATTCCGTATC
TGACCCCAGCATGATGGCCAGAGGGATAAGAGCCTCACAGAGTCACCTTCCCAAGCCCACCACC
TCAGGAAAAACTAGTTTTGAAAAGCAGAATGGAGCAGAGTCAAAGGCTACCACTGGCCCATCAT
TTGAATATGCTGAGGATGCAGTGCCAAGTGAGCCCCTTTCAGGATGGAGGGGCGAAGATGCTAC
TACTGAGAACCAGGAACTGAAACAAGTTGAAGAAACAAAAGAAGATCCTGAGAATAGATTATCT
GAAATTTCCCTGGAGTCATTCAATAAATTTAACAGCAATACTGTGATTTTATTAGAAAAAGAGC
AGTCTCCAAGTGAGGTTGAAGGACAAAAGGAAGAAAAAGGCAAAGAGACAGAAGTTTCTTTGAG
TAGCTCGGATAGGCCTGGGGTGGACCACGTGGAGTCTCTGAGTGACTCTCTGTATGATAGCTTC
TCCTCGTGTGCAAGTCAAACTTCCAACGCCTAGCGGAAGAGCATCCCTCAGTGAGACTCATGCA
TGGTGCACAGACTCCAGAGCTGGGGATGCAGAAGCACTAACTCCAGAGAAGCTGATAGCAGCCA
GTACACCAGCGTTTGCTTCTCTCACGGACTGATAAAAATCGCCTCTACTCACTGTGTTTCAAGA
GGGTTAAAAAAGCAAAATATGATAGAGAATTCTCAATGTTTGCACTTTTTTTTGAGTATTTGTA
CAAAAGCTGTAAATTGGGGGGGGGAAGAGAAATTATATTTGTAGGGGAAGAAGGATAGCAATAA
AAAGTTGGCGCCATGCTCTTGAAA

hide sequence

RefSeq Acc Id:

XM_039091162 ⟹ XP_038947090

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,756,188 (-)	NCBI
mRatBN7.2	13	37,369,948 - 38,203,614 (-)	NCBI

RefSeq Acc Id:

XM_039091163 ⟹ XP_038947091

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,626,680 (-)	NCBI
mRatBN7.2	13	37,369,948 - 38,074,074 (-)	NCBI

RefSeq Acc Id:

XM_039091164 ⟹ XP_038947092

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,505,746 (-)	NCBI
mRatBN7.2	13	37,369,948 - 37,953,134 (-)	NCBI

RefSeq Acc Id:

XM_039091165 ⟹ XP_038947093

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,489,586 (-)	NCBI
mRatBN7.2	13	37,369,948 - 37,937,002 (-)	NCBI

RefSeq Acc Id:

XM_039091166 ⟹ XP_038947094

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,513,945 (-)	NCBI
mRatBN7.2	13	37,369,948 - 37,961,360 (-)	NCBI

RefSeq Acc Id:

XM_039091168 ⟹ XP_038947096

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,360,157 (-)	NCBI
mRatBN7.2	13	37,369,948 - 37,807,559 (-)	NCBI

RefSeq Acc Id:

XM_039091169 ⟹ XP_038947097

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,835,849 (-)	NCBI
mRatBN7.2	13	37,369,948 - 38,283,257 (-)	NCBI

RefSeq Acc Id:

XM_063272672 ⟹ XP_063128742

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,626,680 (-)	NCBI

RefSeq Acc Id:

XM_063272673 ⟹ XP_063128743

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,547,311 (-)	NCBI

RefSeq Acc Id:

XM_063272674 ⟹ XP_063128744

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,626,680 (-)	NCBI

RefSeq Acc Id:

XM_063272675 ⟹ XP_063128745

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,547,334 (-)	NCBI

RefSeq Acc Id:

XM_063272676 ⟹ XP_063128746

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	39,922,576 - 40,494,112 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_008767730	(Get FASTA)	NCBI Sequence Viewer
	XP_017454525	(Get FASTA)	NCBI Sequence Viewer
	XP_017454527	(Get FASTA)	NCBI Sequence Viewer
	XP_017454529	(Get FASTA)	NCBI Sequence Viewer
	XP_038947090	(Get FASTA)	NCBI Sequence Viewer
	XP_038947091	(Get FASTA)	NCBI Sequence Viewer
	XP_038947092	(Get FASTA)	NCBI Sequence Viewer
	XP_038947093	(Get FASTA)	NCBI Sequence Viewer
	XP_038947094	(Get FASTA)	NCBI Sequence Viewer
	XP_038947096	(Get FASTA)	NCBI Sequence Viewer
	XP_038947097	(Get FASTA)	NCBI Sequence Viewer
	XP_063128742	(Get FASTA)	NCBI Sequence Viewer
	XP_063128743	(Get FASTA)	NCBI Sequence Viewer
	XP_063128744	(Get FASTA)	NCBI Sequence Viewer
	XP_063128745	(Get FASTA)	NCBI Sequence Viewer
	XP_063128746	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL87971	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000029665.7
	ENSRNOP00000080373.1
	ENSRNOP00000084549
	ENSRNOP00000084549.2
	ENSRNOP00000085272
	ENSRNOP00000085272.2
	ENSRNOP00000102787.1
	ENSRNOP00000102892.1
	ENSRNOP00000105361.1
	ENSRNOP00000105951
	ENSRNOP00000105951.1
	ENSRNOP00000107266
	ENSRNOP00000107266.1
	ENSRNOP00000112421.1

RefSeq Acc Id:	XP_008767730 ⟸ XM_008769508
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLDRDDAPVTNYFKYFILSTVEGRRELKDSAPLETSKNTSQPFGGYLRPENSHLIMCFCLSREK LAVARLQREVAQRTSQGAMQEKLIHELEEERQLRLQSEERLREVTLESERNRIQMLGLQQQFSR MEETVRSLLQSQGSPEQKKEEPAKITAYQERVSEEERKEQAALGDLRVEADEDSRSEHSSTEGG KEDSRLLLKRLKALEAENSALALENENQREQYERCLDEVANQVVRALLTQKDLREECVKLKTRV FDLEQQNRALSILFQQRVRPASDVLLQEHLQNAKSGAPALKHSGSGVVIPDHPCPRNSCSSGSE LSLSSTCSEYSSGSSYTWQDRKLNGKRQTSQIWDKRLSIDSSLPSGFTSPADELPPTRIKESHI LEGLRKLQKRKVLLESPASVMSKWGYKDCMNSNEGIYSPGIKNSSLKECPPCQSPGRGIPCQNL HQTFNYDANSHEYAHEEFLSSASPRTSPSQGCRIQSSKLTHSVSDSLFTWEPHRKYFAEGTASV YTREMPERLTRCASHCPLERKLCPSVHLPWVQRDRDPHSQGPGHVPLNLQLSDTDDNETLHELH IESSDERSPSDLSLTGDTDRSMENLGVKFGKSECVSHDKGKEECPTHLETSPKAFSFIKQQRVV KRTSSEECVTVIFDAENGEPVEFSSHQAGVVTVTRDEISISSTPAGPSEELTELSPQGITHFQP GATARDYPFLGRPEEEPKTNIPKDENGILTAPNDSFNSPTTVTQNSPRPKLVKPTQGVAWQSNS RSVANMSVYTKQGLTKIPSRSKISPQKSKLVDPMPTTLVPSSGLGTLAKTPASPTGKLSQCTNA ESPGTFCDVQPESHIPKHPTQLPHIPKISNKKNWVQCPKSQTAGIQSRHLMGKSDNGESPTRAK RCGSEPKTRMRSPSPPTPPGRSVSLLVRPSYDYPPLPSPAKPETKAPGDTVSTGLKSPVLKGSS APLVSSSPAMSEIQKKPSVASRKSAFPTALPSTQAVVHTRYPEHTSSSPFAVTAPGPTKVSPKR GIPKAPHPQALGTTHMDTDLQTPKTRPSSYELLEMTSCKNLSPGRKGQLSDSTVTPHRPSFSGP NEFLTPQVNSTSSSSSSCRNQGTSQGGQNPPEKGPKTRLPVGLRVLMKSPQLLRKTSMVPGKQE KDSLNEASRSSVTANKSNPEDSKDPASLETSRDERTTALLGLRGPESLARGLGLESTPPESLES SISRDDGRDGVDSRAIKRSFSSSKPHLKPALGMNGAKARSQSFSFHLGEKPSTPPIEGPGKIRT QIITNTAERGNSLTRQNISMEGSPSKTPSVSTPDNLPNAGRPLGNPFSRQGSLCSTGSSSSQHG SPSKLPLRMLTRPEGLLTPEEEDQRFSTQEECPGRGVHEQSSSNHHRHPSSTLSDCPQSLQVPG RIQRPSNLETNGISKLETSGRHPDASPTGTSVVSPEAPLSPSIEEKVMLCIQENVEKGQAQTKS ASVEVKPRAGPSFTSWFGFRKSRLPALSSRRMEASKSKVEKKDTKLKSERKKEKKKAEVQSKRE NELSRGTKKADGQSPDDGLQNTESLKATQDIYNQMKSEPRNRPSPAVSPTKDAFMTELLNRVDK RAALQTESGSKGVSCRSVLEGTSQGSCFASGSVSTQGSQKKNIKTKVDMEKPRESLGAEVDEDV REDEEDRVADAALQSHVIESNCQMRTLDSGIGTFPLPDSGNRSMGRYICQQDSPEDTDPLLPLQ PAPSMPSSARAQTLDREVPSSTDSQSSSESTIIHSVSDPSMMARGIRASQSHLPKPTTSGKTSF EKQNGAESKATTGPSFEYAEDAVPSEPLSGWRGEDATTENQELKQVEETKEDPENRLSEISLES FNKFNSNTVILLEKEQSPSEVEGQKEEKGKETEVSLSSSDRPGVDHVESLSDSLYDSFSSCASQ TSNA hide sequence

RefSeq Acc Id:	XP_017454529 ⟸ XM_017599040
- Peptide Label:	isoform X2
- UniProtKB:	F1LU96 (UniProtKB/TrEMBL), A0A8I5ZYD4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGKRQLDRRDFGKRLSLDSSLVEYMDSNKCIEHLLAQLREQHRSLWREKLAVARLQREVAQRT SQGAMQEKLIHELEEERQLRLQSEERLREVTLESERNRIQMLGLQQQFSRMEETVRSLLQSQGS PEQKKEEPAKITAYQERVSEEERKEQAALGDLRVEADEDSRSEHSSTEGGKEDSRLLLKRLKAL EAENSALALENENQREQYERCLDEVANQVVRALLTQKDLREECVKLKTRVFDLEQQNRALSILF QQRVRPASDVLLQEHLQNAKSGAPALKHSGSGVVIPDHPCPRNSCSSGSELSLSSTCSEYSSGS SYTWQDRKLNGKRQTSQIWDKRLSIDSSLPSGFTSPADELPPTRIKESHILEGLRKLQKRKVLL ESPASVMSKWGYKDCMNSNEGIYSPGIKNSSLKECPPCQSPGRGIPCQNLHQTFNYDANSHEYA HEEFLSSASPRTSPSQGCRIQSSKLTHSVSDSLFTWEPHRKYFAEGTASVYTREMPERLTRCAS HCPLERKLCPSVHLPWVQRDRDPHSQGPGHVPLNLQLSDTDDNETLHELHIESSDERSPSDLSL TGDTDRSMENLGVKFGKSECVSHDKGKEECPTHLETSPKAFSFIKQQRVVKRTSSEECVTVIFD AENGEPVEFSSHQAGVVTVTRDEISISSTPAGPSEELTELSPQGITHFQPGATARDYPFLGRPE EEPKTNIPKDENGILTAPNDSFNSPTTVTQNSPRPKLVKPTQGVAWQSNSRSVANMSVYTKQGL TKIPSRSKISPQKSKLVDPMPTTLVPSSGLGTLAKTPASPTGKLSQCTNAESPGTFCDVQPESH IPKHPTQLPHIPKISNKKNWVQCPKSQTAGIQSRHLMGKSDNGESPTRAKRCGSEPKTRMRSPS PPTPPGRSVSLLVRPSYDYPPLPSPAKPETKAPGDTVSTGLKSPVLKGSSAPLVSSSPAMSEIQ KKPSVASRKSAFPTALPSTQAVVHTRYPEHTSSSPFAVTAPGPTKVSPKRGIPKAPHPQALGTT HMDTDLQTPKTRPSSYELLEMTSCKNLSPGRKGQLSDSTVTPHRPSFSGPNEFLTPQVNSTSSS SSSCRNQGTSQGGQNPPEKGPKTRLPVGLRVLMKSPQLLRKTSMVPGKQEKDSLNEASRSSVTA NKSNPEDSKDPASLETSRDERTTALLGLRGPESLARGLGLESTPPESLESSISRDDGRDGVDSR AIKRSFSSSKPHLKPALGMNGAKARSQSFSFHLGEKPSTPPIEGPGKIRTQIITNTAERGNSLT RQNISMEGSPSKTPSVSTPDNLPNAGRPLGNPFSRQGSLCSTGSSSSQHGSPSKLPLRMLTRPE GLLTPEEEDQRFSTQEECPGRGVHEQSSSNHHRHPSSTLSDCPQSLQVPGRIQRPSNLETNGIS KLETSGRHPDASPTGTSVVSPEAPLSPSIEEKVMLCIQENVEKGQAQTKSASVEVKPRAGPSFT SWFGFRKSRLPALSSRRMEASKSKVEKKDTKLKSERKKEKKKAEVQSKRENELSRGTKKADGQS PDDGLQNTESLKATQDIYNQMKSEPRNRPSPAVSPTKDAFMTELLNRVDKRAALQTESGSKGVS CRSVLEGTSQGSCFASGSVSTQGSQKKNIKTKVDMEKPRESLGAEVDEDVREDEEDRVADAALQ SHVIESNCQMRTLDSGIGTFPLPDSGNRSMGRYICQQDSPEDTDPLLPLQPAPSMPSSARAQTL DREVPSSTDSQSSSESTIIHSVSDPSMMARGIRASQSHLPKPTTSGKTSFEKQNGAESKATTGP SFEYAEDAVPSEPLSGWRGEDATTENQELKQVEETKEDPENRLSEISLESFNKFNSNTVILLEK EQSPSEVEGQKEEKGKETEVSLSSSDRPGVDHVESLSDSLYDSFSSCASQTSNA hide sequence

RefSeq Acc Id:	XP_017454525 ⟸ XM_017599036
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLDRDDAPVTNYFKYFILSTVEGRRELKDSAPLETSKNTSQPFGGYLRPENSHLIMCFCLSREK LAVARLQREVAQRTSQGAMQEKLIHELEEERQLRLQSEERLREVTLESERNRIQMLGLQQQFSR MEETVRSLLQSQGSPEQKKEEPAKITAYQERVSEEERKEQAALGDLRVEADEDSRSEHSSTEGG KEDSRLLLKRLKALEAENSALALENENQREQYERCLDEVANQVVRALLTQKDLREECVKLKTRV FDLEQQNRALSILFQQRVRPASDVLLQQTSQIWDKRLSIDSSLPSGFTSPADELPPTRIKESHI LEGLRKLQKRKVLLESPASVMSKWGYKDCMNSNEGIYSPGIKNSSLKECPPCQSPGRGIPCQNL HQTFNYDANSHEYAHEEFLSSASPRTSPSQGCRIQSSKLTHSVSDSLFTWEPHRKYFAEGTASV YTREMPERLTRCASHCPLERKLCPSVHLPWVQRDRDPHSQGPGHVPLNLQLSDTDDNETLHELH IESSDERSPSDLSLTGDTDRSMENLGVKFGKSECVSHDKGKEECPTHLETSPKAFSFIKQQRVV KRTSSEECVTVIFDAENGEPVEFSSHQAGVVTVTRDEISISSTPAGPSEELTELSPQGITHFQP GATARDYPFLGRPEEEPKTNIPKDENGILTAPNDSFNSPTTVTQNSPRPKLVKPTQGVAWQSNS RSVANMSVYTKQGLTKIPSRSKISPQKSKLVDPMPTTLVPSSGLGTLAKTPASPTGKLSQCTNA ESPGTFCDVQPESHIPKHPTQLPHIPKISNKKNWVQCPKSQTAGIQSRHLMGKSDNGESPTRAK RCGSEPKTRMRSPSPPTPPGRSVSLLVRPSYDYPPLPSPAKPETKAPGDTVSTGLKSPVLKGSS APLVSSSPAMSEIQKKPSVASRKSAFPTALPSTQAVVHTRYPEHTSSSPFAVTAPGPTKVSPKR GIPKAPHPQALGTTHMDTDLQTPKTRPSSYELLEMTSCKNLSPGRKGQLSDSTVTPHRPSFSGP NEFLTPQVNSTSSSSSSCRNQGTSQGGQNPPEKGPKTRLPVGLRVLMKSPQLLRKTSMVPGKQE KDSLNEASRSSVTANKSNPEDSKDPASLETSRDERTTALLGLRGPESLARGLGLESTPPESLES SISRDDGRDGVDSRAIKRSFSSSKPHLKPALGMNGAKARSQSFSFHLGEKPSTPPIEGPGKIRT QIITNTAERGNSLTRQNISMEGSPSKTPSVSTPDNLPNAGRPLGNPFSRQGSLCSTGSSSSQHG SPSKLPLRMLTRPEGLLTPEEEDQRFSTQEECPGRGVHEQSSSNHHRHPSSTLSDCPQSLQVPG RIQRPSNLETNGISKLETSGRHPDASPTGTSVVSPEAPLSPSIEEKVMLCIQENVEKGQAQTKS ASVEVKPRAGPSFTSWFGFRKSRLPALSSRRMEASKSKVEKKDTKLKSERKKEKKKAEVQSKRE NELSRGTKKADGQSPDDGLQNTESLKATQDIYNQMKSEPRNRPSPAVSPTKDAFMTELLNRVDK RAALQTESGSKGVSCRSVLEGTSQGSCFASGSVSTQGSQKKNIKTKVDMEKPRESLGAEVDEDV REDEEDRVADAALQSHVIESNCQMRTLDSGIGTFPLPDSGNRSMGRYICQQDSPEDTDPLLPLQ PAPSMPSSARAQTLDREVPSSTDSQSSSESTIIHSVSDPSMMARGIRASQSHLPKPTTSGKTSF EKQNGAESKATTGPSFEYAEDAVPSEPLSGWRGEDATTENQELKQVEETKEDPENRLSEISLES FNKFNSNTVILLEKEQSPSEVEGQKEEKGKETEVSLSSSDRPGVDHVESLSDSLYDSFSSCASQ TSNA hide sequence

RefSeq Acc Id:	XP_017454527 ⟸ XM_017599038
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6A100 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLDRDDAPVTNYFKYFILSTVEGRRELKDSAPLETSKNTSQPFGGYLRPENSHLIMCFCLSREK LAVARLQREVAQRTSQGAMQEKLIHELEEERQLRLQSEERLREVTLESERNRIQMLGLQQQFSR MEETVRSLLQSQGSPEQKKEEPAKITAYQERVSEEERKEQAALGDLRVEADEDSRSEHSSTEGG KEDSRLLLKRLKALEAENSALALENENQREQYERCLDEVANQVVRALLTQKDLREECVKLKTRV FDLEQQNRALSILFQQRVRPASDVLLQEHLQNAKSGAPALKHSGSGVVIPDHPCPRNSCSSGSE LSLSSTCSEYSSGSSYTWQDRKLNGKRQTSQIWDKRLSIDSSLPSGFTSPADELPPTRIKESHI LEGLRKLQKRKVLLESPASVMSKWGYKDCMNSNEGIYSPGIKNSSLKECPPCQSPGRGIPCQNL HQTFNYDANSHEYAHEEFLSSASPRTSPSQGCRIQSSKLTHSVSDSLFTWEPHRKYFAEGTASV YTREMPERLTRCASHCPLERKLCPSVHLPWVQRDRDPHSQGPGHVPLNLQLSDTDDNETLHELH IESSDERSPSDLSLTGDTDRSMENLGVKFGKSECVSHDKGKEECPTHLETSPKAFSFIKQQRVV KRTSSEECVTVIFDAENGEPVEFSSHQAGVVTVTRDEISISSTPAGPSEELTELSPQGITHFQP GATARDYPFLGRPEEEPKTNIPKDENGILTAPNDSFNSPTTVTQNSPRPKLVKPTQGVAWQSNS RSVANMSVYTKQGLTKIPSRSKISPQKSKLVDPMPTTLVPSSGLGTLAKTPASPTGKLSQCTNA ESPGTFCDVQPESHIPKHPTQLPHIPKISNKKNWVQCPKSQTAGIQSRHLMGKSDNGESPTRAK RCGSEPKTRMRSPSPPTPPGRSVSLLVRPSYDYPPLPSPAKPETKAPGDTVSTGLKSPVLKGSS APLVSSSPAMSEIQKKPSVASRKSAFPTALPSTQAVVHTRYPEHTSSSPFAVTAPGPTKVSPKR GIPKAPHPQALGTTHMDTDLQTPKTRPSSYELLEMTSCKNLSPGRKGQLSDSTVTPHRPSFSGP NEFLTPQVNSTSSSSSSCRNQGTSQGGQNPPEKGPKTRLPVGLRVLMKSPQLLRKTSMVPGKQE KDSLNEASRSSVTANKSNPEDSKDPASLETSRDERTTALLGLRGPESLARGLGLESTPPESLES SISRDDGRDGVDSRAIKRSFSSSKPHLKPALGMNGAKARSQSFSFHLGEKPSTPPIEGPGKIRT QIITNTAERGNSLTRQNISMEGSPSKTPSVSTPDNLPNAGRPLGNPFSRQGSLCSTGSSSSQHG SPSKLPLRMLTRPEGLLTPEEEDQRFSTQEECPGRGVHEQSSSNHHRHPSSTLSDCPQSLQVPG RIQRPSNLETNGISKLETSGRHPDASPTGTSVVSPEAPLSPSIEEKVMLCIQENVEKGQAQTKS ASVEVKPRAGPSFTSWFGFRKSRLPALSSRRMEASKSKVEKKDTKLKSERKKEKKKAEVQSKRE NELSRGTKKADGQSPDDGLQNTESLKATQDIYNQMKSEPRNRPSPAVSPTKDAFMTELLNRVDK RAALQTESGSKGVSCRSVLEGTSQGSCFASGSVSTQGSQKKNIKTKVDMEKPRESLGAEVDEDV REDEEDRVADAALQSHVIESNCQMRTLDSGIGTFPLPDSGNRSMGRYICQQDSPEDTDPLLPLQ PAPSMPSSARAQTLDREVPSSTDSQSSSESTIIHSVSDPSMMARGIRASQSHLPKPTTSGKTSF EKQNGAESKATTGPSFEYAEDAVPSEPLSGWRGEDATTENQVVVIPHPESPVERKSHD hide sequence

Ensembl Acc Id:

ENSRNOP00000029665 ⟸ ENSRNOT00000038020

RefSeq Acc Id:	XP_038947097 ⟸ XM_039091169
- Peptide Label:	isoform X12
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038947090 ⟸ XM_039091162
- Peptide Label:	isoform X2
- UniProtKB:	F1LU96 (UniProtKB/TrEMBL), A0A8I5ZYD4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038947091 ⟸ XM_039091163
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038947094 ⟸ XM_039091166
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038947092 ⟸ XM_039091164
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038947093 ⟸ XM_039091165
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038947096 ⟸ XM_039091168
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000084549 ⟸ ENSRNOT00000116447

Ensembl Acc Id:

ENSRNOP00000085272 ⟸ ENSRNOT00000105224

Ensembl Acc Id:

ENSRNOP00000080373 ⟸ ENSRNOT00000100167

RefSeq Acc Id:	XP_063128742 ⟸ XM_063272672
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128744 ⟸ XM_063272674
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128745 ⟸ XM_063272675
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128743 ⟸ XM_063272673
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZYD4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128746 ⟸ XM_063272676
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I6A100 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000105951 ⟸ ENSRNOT00000167765

Ensembl Acc Id:

ENSRNOP00000102892 ⟸ ENSRNOT00000140418

Ensembl Acc Id:

ENSRNOP00000112421 ⟸ ENSRNOT00000150373

Ensembl Acc Id:

ENSRNOP00000107266 ⟸ ENSRNOT00000125237

Ensembl Acc Id:

ENSRNOP00000102787 ⟸ ENSRNOT00000133191

Ensembl Acc Id:

ENSRNOP00000105361 ⟸ ENSRNOT00000153452

Protein Domains

Nck-associated protein 5 C-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1LU96-F1-model_v2	AlphaFold	F1LU96	1-1811	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564507	AgrOrtholog
BioCyc Gene	G2FUF-18450	BioCyc
Ensembl Genes	ENSRNOG00000021553	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000038020.8	UniProtKB/TrEMBL
	ENSRNOT00000100167.2	UniProtKB/TrEMBL
	ENSRNOT00000105224	ENTREZGENE
	ENSRNOT00000105224.2	UniProtKB/TrEMBL
	ENSRNOT00000116447	ENTREZGENE
	ENSRNOT00000116447.2	UniProtKB/TrEMBL
	ENSRNOT00000125237	ENTREZGENE
	ENSRNOT00000125237.1	UniProtKB/TrEMBL
	ENSRNOT00000133191.1	UniProtKB/TrEMBL
	ENSRNOT00000140418.1	UniProtKB/TrEMBL
	ENSRNOT00000150373.1	UniProtKB/TrEMBL
	ENSRNOT00000153452.1	UniProtKB/TrEMBL
	ENSRNOT00000167765	ENTREZGENE
	ENSRNOT00000167765.1	UniProtKB/TrEMBL
InterPro	NCKAP5_C	UniProtKB/TrEMBL
	Nckap5l	UniProtKB/TrEMBL
NCBI Gene	363974	ENTREZGENE
PANTHER	NCK-ASSOCIATED PROTEIN 5	UniProtKB/TrEMBL
	PTHR21740	UniProtKB/TrEMBL
Pfam	NCKAP5	UniProtKB/TrEMBL
PhenoGen	Nckap5	PhenoGen
RatGTEx	ENSRNOG00000021553	RatGTEx
UniProt	A0A8I5ZPN2_RAT	UniProtKB/TrEMBL
	A0A8I5ZYD4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A100	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L768_RAT	UniProtKB/TrEMBL
	A0ABK0L9W8_RAT	UniProtKB/TrEMBL
	A0ABK0LE14_RAT	UniProtKB/TrEMBL
	A0ABK0LNW9_RAT	UniProtKB/TrEMBL
	A0ABK0LX01_RAT	UniProtKB/TrEMBL
	A0ABK0M9I8_RAT	UniProtKB/TrEMBL
	F1LU96	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2009-06-16	Nap5	Nck-associated protein 5	RGD1564507	similar to Nck-associated protein 5	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1564507	similar to Nck-associated protein 5	RGD1564507_predicted	similar to Nck-associated protein 5 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1564507_predicted	similar to Nck-associated protein 5 (predicted)	LOC363974	similar to Nck-associated protein 5	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC363974	similar to Nck-associated protein 5			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype